Multiple sequence alignment - TraesCS6D01G235700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G235700 chr6D 100.000 5070 0 0 1 5070 331576227 331571158 0.000000e+00 9363.0
1 TraesCS6D01G235700 chr6D 86.111 108 13 1 2644 2749 441969714 441969821 1.150000e-21 115.0
2 TraesCS6D01G235700 chr6A 95.075 3797 115 26 411 4170 470900786 470897025 0.000000e+00 5910.0
3 TraesCS6D01G235700 chr6A 91.993 562 25 10 4192 4752 470896338 470895796 0.000000e+00 771.0
4 TraesCS6D01G235700 chr6A 86.873 259 29 5 4760 5017 470895419 470895165 8.310000e-73 285.0
5 TraesCS6D01G235700 chr6A 86.667 105 12 1 2647 2749 222554899 222555003 1.150000e-21 115.0
6 TraesCS6D01G235700 chr6B 95.783 3201 84 25 551 3726 489436435 489439609 0.000000e+00 5116.0
7 TraesCS6D01G235700 chr6B 87.266 801 67 22 4227 5017 489439921 489440696 0.000000e+00 881.0
8 TraesCS6D01G235700 chr6B 85.902 305 20 9 3770 4057 489439623 489439921 2.290000e-78 303.0
9 TraesCS6D01G235700 chr6B 95.425 153 5 2 401 552 489430910 489431061 5.070000e-60 243.0
10 TraesCS6D01G235700 chr7A 92.079 404 25 5 4 402 497842636 497842235 3.430000e-156 562.0
11 TraesCS6D01G235700 chr5B 91.155 407 30 4 1 402 556946687 556947092 9.600000e-152 547.0
12 TraesCS6D01G235700 chr2B 91.542 402 26 6 4 400 46072363 46071965 9.600000e-152 547.0
13 TraesCS6D01G235700 chr2B 92.727 55 4 0 5016 5070 252980972 252981026 4.210000e-11 80.5
14 TraesCS6D01G235700 chr4A 90.534 412 28 9 1 404 650055014 650055422 7.470000e-148 534.0
15 TraesCS6D01G235700 chr3A 89.851 404 24 5 4 402 60807052 60807443 2.110000e-138 503.0
16 TraesCS6D01G235700 chr3A 89.216 102 9 1 2650 2749 10305864 10305763 5.330000e-25 126.0
17 TraesCS6D01G235700 chr2D 91.154 260 18 3 4 259 288229261 288229003 1.040000e-91 348.0
18 TraesCS6D01G235700 chr2D 86.667 105 12 1 2647 2749 383356241 383356345 1.150000e-21 115.0
19 TraesCS6D01G235700 chr4B 91.736 121 9 1 1 120 634446218 634446098 3.140000e-37 167.0
20 TraesCS6D01G235700 chr4B 85.714 112 14 1 2640 2749 255388167 255388278 3.210000e-22 117.0
21 TraesCS6D01G235700 chr7D 88.571 105 10 2 2647 2749 79629834 79629938 5.330000e-25 126.0
22 TraesCS6D01G235700 chr4D 87.736 106 11 1 2646 2749 259497366 259497261 6.890000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G235700 chr6D 331571158 331576227 5069 True 9363 9363 100.000000 1 5070 1 chr6D.!!$R1 5069
1 TraesCS6D01G235700 chr6A 470895165 470900786 5621 True 2322 5910 91.313667 411 5017 3 chr6A.!!$R1 4606
2 TraesCS6D01G235700 chr6B 489436435 489440696 4261 False 2100 5116 89.650333 551 5017 3 chr6B.!!$F2 4466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.325933 CTTCTCCATGTCCAGTGGCA 59.674 55.0 3.51 6.52 36.66 4.92 F
1302 1304 0.546507 TGTGGGAGTATCACCAGGCA 60.547 55.0 0.00 0.00 38.18 4.75 F
1970 1990 0.107017 ATGCACGCTAGCCTGGATTT 60.107 50.0 13.53 0.00 0.00 2.17 F
3291 3323 0.458543 AGATAAGGACAGTGCACGCG 60.459 55.0 12.01 3.53 0.00 6.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1510 1512 0.606401 ATCAAGCACACCGGGAGTTG 60.606 55.0 6.32 2.02 0.00 3.16 R
3069 3098 0.110823 GGATCGTGTTTCGTGTGTGC 60.111 55.0 0.00 0.00 40.80 4.57 R
3294 3326 0.316114 GCGACATGTGTGTGTGTGTG 60.316 55.0 1.15 0.00 39.09 3.82 R
4916 6026 0.036105 ACATGGCGATTGAGTGCAGA 60.036 50.0 0.00 0.00 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.876612 ACTTGTTCTGCTCATTCTCATTC 57.123 39.130 0.00 0.00 0.00 2.67
23 24 5.311265 ACTTGTTCTGCTCATTCTCATTCA 58.689 37.500 0.00 0.00 0.00 2.57
24 25 5.944599 ACTTGTTCTGCTCATTCTCATTCAT 59.055 36.000 0.00 0.00 0.00 2.57
25 26 6.093771 ACTTGTTCTGCTCATTCTCATTCATC 59.906 38.462 0.00 0.00 0.00 2.92
26 27 5.742063 TGTTCTGCTCATTCTCATTCATCT 58.258 37.500 0.00 0.00 0.00 2.90
27 28 6.178324 TGTTCTGCTCATTCTCATTCATCTT 58.822 36.000 0.00 0.00 0.00 2.40
28 29 6.315642 TGTTCTGCTCATTCTCATTCATCTTC 59.684 38.462 0.00 0.00 0.00 2.87
29 30 6.236558 TCTGCTCATTCTCATTCATCTTCT 57.763 37.500 0.00 0.00 0.00 2.85
30 31 6.282167 TCTGCTCATTCTCATTCATCTTCTC 58.718 40.000 0.00 0.00 0.00 2.87
31 32 5.366460 TGCTCATTCTCATTCATCTTCTCC 58.634 41.667 0.00 0.00 0.00 3.71
32 33 5.104652 TGCTCATTCTCATTCATCTTCTCCA 60.105 40.000 0.00 0.00 0.00 3.86
33 34 5.998981 GCTCATTCTCATTCATCTTCTCCAT 59.001 40.000 0.00 0.00 0.00 3.41
34 35 6.072948 GCTCATTCTCATTCATCTTCTCCATG 60.073 42.308 0.00 0.00 0.00 3.66
35 36 6.896883 TCATTCTCATTCATCTTCTCCATGT 58.103 36.000 0.00 0.00 0.00 3.21
36 37 6.990939 TCATTCTCATTCATCTTCTCCATGTC 59.009 38.462 0.00 0.00 0.00 3.06
37 38 5.287674 TCTCATTCATCTTCTCCATGTCC 57.712 43.478 0.00 0.00 0.00 4.02
38 39 4.718276 TCTCATTCATCTTCTCCATGTCCA 59.282 41.667 0.00 0.00 0.00 4.02
39 40 5.032327 TCATTCATCTTCTCCATGTCCAG 57.968 43.478 0.00 0.00 0.00 3.86
40 41 4.472470 TCATTCATCTTCTCCATGTCCAGT 59.528 41.667 0.00 0.00 0.00 4.00
41 42 3.900966 TCATCTTCTCCATGTCCAGTG 57.099 47.619 0.00 0.00 0.00 3.66
42 43 2.502947 TCATCTTCTCCATGTCCAGTGG 59.497 50.000 1.40 1.40 38.11 4.00
43 44 0.615331 TCTTCTCCATGTCCAGTGGC 59.385 55.000 3.51 0.00 36.66 5.01
44 45 0.325933 CTTCTCCATGTCCAGTGGCA 59.674 55.000 3.51 6.52 36.66 4.92
45 46 0.770499 TTCTCCATGTCCAGTGGCAA 59.230 50.000 3.51 0.00 36.66 4.52
46 47 0.770499 TCTCCATGTCCAGTGGCAAA 59.230 50.000 3.51 0.00 36.66 3.68
47 48 1.355381 TCTCCATGTCCAGTGGCAAAT 59.645 47.619 3.51 0.00 36.66 2.32
48 49 2.575735 TCTCCATGTCCAGTGGCAAATA 59.424 45.455 3.51 0.00 36.66 1.40
49 50 2.684881 CTCCATGTCCAGTGGCAAATAC 59.315 50.000 3.51 0.00 36.66 1.89
50 51 2.308570 TCCATGTCCAGTGGCAAATACT 59.691 45.455 3.51 0.00 36.66 2.12
51 52 3.091545 CCATGTCCAGTGGCAAATACTT 58.908 45.455 3.51 0.00 0.00 2.24
52 53 3.511146 CCATGTCCAGTGGCAAATACTTT 59.489 43.478 3.51 0.00 0.00 2.66
53 54 4.021192 CCATGTCCAGTGGCAAATACTTTT 60.021 41.667 3.51 0.00 0.00 2.27
54 55 5.511202 CCATGTCCAGTGGCAAATACTTTTT 60.511 40.000 3.51 0.00 0.00 1.94
55 56 5.195001 TGTCCAGTGGCAAATACTTTTTC 57.805 39.130 3.51 0.00 0.00 2.29
56 57 4.646945 TGTCCAGTGGCAAATACTTTTTCA 59.353 37.500 3.51 0.00 0.00 2.69
57 58 5.221224 TGTCCAGTGGCAAATACTTTTTCAG 60.221 40.000 3.51 0.00 0.00 3.02
58 59 4.280677 TCCAGTGGCAAATACTTTTTCAGG 59.719 41.667 3.51 0.00 0.00 3.86
59 60 4.039124 CCAGTGGCAAATACTTTTTCAGGT 59.961 41.667 0.00 0.00 0.00 4.00
60 61 5.453198 CCAGTGGCAAATACTTTTTCAGGTT 60.453 40.000 0.00 0.00 0.00 3.50
61 62 6.048509 CAGTGGCAAATACTTTTTCAGGTTT 58.951 36.000 0.00 0.00 0.00 3.27
62 63 6.538381 CAGTGGCAAATACTTTTTCAGGTTTT 59.462 34.615 0.00 0.00 0.00 2.43
63 64 6.761242 AGTGGCAAATACTTTTTCAGGTTTTC 59.239 34.615 0.00 0.00 0.00 2.29
64 65 6.536941 GTGGCAAATACTTTTTCAGGTTTTCA 59.463 34.615 0.00 0.00 0.00 2.69
65 66 7.065204 GTGGCAAATACTTTTTCAGGTTTTCAA 59.935 33.333 0.00 0.00 0.00 2.69
66 67 7.065204 TGGCAAATACTTTTTCAGGTTTTCAAC 59.935 33.333 0.00 0.00 0.00 3.18
85 86 2.787473 CCTGAAGGTATCCAGTTGCA 57.213 50.000 0.00 0.00 0.00 4.08
86 87 3.287867 CCTGAAGGTATCCAGTTGCAT 57.712 47.619 0.00 0.00 0.00 3.96
87 88 4.422073 CCTGAAGGTATCCAGTTGCATA 57.578 45.455 0.00 0.00 0.00 3.14
88 89 4.130118 CCTGAAGGTATCCAGTTGCATAC 58.870 47.826 0.00 0.00 0.00 2.39
89 90 3.792401 TGAAGGTATCCAGTTGCATACG 58.208 45.455 0.00 0.00 0.00 3.06
90 91 2.910688 AGGTATCCAGTTGCATACGG 57.089 50.000 0.00 0.00 0.00 4.02
91 92 2.116238 AGGTATCCAGTTGCATACGGT 58.884 47.619 0.00 0.00 0.00 4.83
92 93 2.158957 AGGTATCCAGTTGCATACGGTG 60.159 50.000 0.00 0.00 0.00 4.94
93 94 2.419574 GGTATCCAGTTGCATACGGTGT 60.420 50.000 0.00 0.00 0.00 4.16
94 95 3.181473 GGTATCCAGTTGCATACGGTGTA 60.181 47.826 0.00 0.00 0.00 2.90
95 96 2.373540 TCCAGTTGCATACGGTGTAC 57.626 50.000 0.00 0.00 0.00 2.90
96 97 1.897133 TCCAGTTGCATACGGTGTACT 59.103 47.619 0.00 0.00 0.00 2.73
97 98 1.999735 CCAGTTGCATACGGTGTACTG 59.000 52.381 4.30 4.30 39.86 2.74
98 99 2.611971 CCAGTTGCATACGGTGTACTGT 60.612 50.000 9.40 1.69 39.18 3.55
99 100 3.064207 CAGTTGCATACGGTGTACTGTT 58.936 45.455 1.30 0.00 37.60 3.16
100 101 3.496884 CAGTTGCATACGGTGTACTGTTT 59.503 43.478 1.30 0.00 37.60 2.83
101 102 3.744426 AGTTGCATACGGTGTACTGTTTC 59.256 43.478 1.30 0.00 36.70 2.78
102 103 3.671008 TGCATACGGTGTACTGTTTCT 57.329 42.857 1.30 0.00 36.70 2.52
103 104 4.787260 TGCATACGGTGTACTGTTTCTA 57.213 40.909 1.30 0.00 36.70 2.10
104 105 5.136816 TGCATACGGTGTACTGTTTCTAA 57.863 39.130 1.30 0.00 36.70 2.10
105 106 5.726397 TGCATACGGTGTACTGTTTCTAAT 58.274 37.500 1.30 0.00 36.70 1.73
106 107 5.579119 TGCATACGGTGTACTGTTTCTAATG 59.421 40.000 1.30 1.26 36.70 1.90
107 108 5.501897 GCATACGGTGTACTGTTTCTAATGC 60.502 44.000 10.96 10.96 36.00 3.56
108 109 3.997762 ACGGTGTACTGTTTCTAATGCA 58.002 40.909 0.00 0.00 29.59 3.96
109 110 4.382291 ACGGTGTACTGTTTCTAATGCAA 58.618 39.130 0.00 0.00 29.59 4.08
110 111 4.451096 ACGGTGTACTGTTTCTAATGCAAG 59.549 41.667 0.00 0.00 29.59 4.01
111 112 4.669197 CGGTGTACTGTTTCTAATGCAAGC 60.669 45.833 0.00 0.00 0.00 4.01
112 113 4.215399 GGTGTACTGTTTCTAATGCAAGCA 59.785 41.667 0.00 0.00 0.00 3.91
113 114 5.278266 GGTGTACTGTTTCTAATGCAAGCAA 60.278 40.000 0.00 0.00 0.00 3.91
114 115 6.205784 GTGTACTGTTTCTAATGCAAGCAAA 58.794 36.000 0.00 0.00 0.00 3.68
115 116 6.695278 GTGTACTGTTTCTAATGCAAGCAAAA 59.305 34.615 0.00 0.00 0.00 2.44
116 117 7.382218 GTGTACTGTTTCTAATGCAAGCAAAAT 59.618 33.333 0.00 0.00 0.00 1.82
117 118 7.594758 TGTACTGTTTCTAATGCAAGCAAAATC 59.405 33.333 0.00 0.00 0.00 2.17
118 119 5.928264 ACTGTTTCTAATGCAAGCAAAATCC 59.072 36.000 0.00 0.00 0.00 3.01
119 120 5.851720 TGTTTCTAATGCAAGCAAAATCCA 58.148 33.333 0.00 0.00 0.00 3.41
120 121 5.927689 TGTTTCTAATGCAAGCAAAATCCAG 59.072 36.000 0.00 0.00 0.00 3.86
121 122 5.726980 TTCTAATGCAAGCAAAATCCAGT 57.273 34.783 0.00 0.00 0.00 4.00
122 123 5.726980 TCTAATGCAAGCAAAATCCAGTT 57.273 34.783 0.00 0.00 0.00 3.16
123 124 5.472148 TCTAATGCAAGCAAAATCCAGTTG 58.528 37.500 0.00 0.00 0.00 3.16
134 135 6.939132 CAAAATCCAGTTGCAGATCTAGAT 57.061 37.500 4.47 4.47 0.00 1.98
135 136 6.726230 CAAAATCCAGTTGCAGATCTAGATG 58.274 40.000 10.74 0.00 0.00 2.90
136 137 5.883685 AATCCAGTTGCAGATCTAGATGA 57.116 39.130 10.74 0.00 0.00 2.92
137 138 5.883685 ATCCAGTTGCAGATCTAGATGAA 57.116 39.130 10.74 0.00 0.00 2.57
138 139 5.016051 TCCAGTTGCAGATCTAGATGAAC 57.984 43.478 10.74 7.55 0.00 3.18
139 140 3.801050 CCAGTTGCAGATCTAGATGAACG 59.199 47.826 10.74 0.00 0.00 3.95
140 141 4.440663 CCAGTTGCAGATCTAGATGAACGA 60.441 45.833 10.74 0.00 0.00 3.85
141 142 5.288015 CAGTTGCAGATCTAGATGAACGAT 58.712 41.667 10.74 0.00 0.00 3.73
142 143 6.442112 CAGTTGCAGATCTAGATGAACGATA 58.558 40.000 10.74 0.00 0.00 2.92
143 144 7.089538 CAGTTGCAGATCTAGATGAACGATAT 58.910 38.462 10.74 0.00 0.00 1.63
144 145 7.598118 CAGTTGCAGATCTAGATGAACGATATT 59.402 37.037 10.74 0.00 0.00 1.28
145 146 8.147058 AGTTGCAGATCTAGATGAACGATATTT 58.853 33.333 10.74 0.00 0.00 1.40
146 147 8.431593 GTTGCAGATCTAGATGAACGATATTTC 58.568 37.037 10.74 0.00 0.00 2.17
147 148 7.890515 TGCAGATCTAGATGAACGATATTTCT 58.109 34.615 10.74 0.00 0.00 2.52
148 149 8.363390 TGCAGATCTAGATGAACGATATTTCTT 58.637 33.333 10.74 0.00 0.00 2.52
149 150 8.859156 GCAGATCTAGATGAACGATATTTCTTC 58.141 37.037 10.74 0.00 32.39 2.87
156 157 8.430801 AGATGAACGATATTTCTTCTTCAAGG 57.569 34.615 0.00 0.00 36.91 3.61
157 158 8.260818 AGATGAACGATATTTCTTCTTCAAGGA 58.739 33.333 0.00 0.00 36.91 3.36
158 159 7.834068 TGAACGATATTTCTTCTTCAAGGAG 57.166 36.000 0.00 0.00 0.00 3.69
159 160 7.386851 TGAACGATATTTCTTCTTCAAGGAGT 58.613 34.615 0.00 0.00 0.00 3.85
160 161 7.878127 TGAACGATATTTCTTCTTCAAGGAGTT 59.122 33.333 0.00 0.00 0.00 3.01
161 162 9.367444 GAACGATATTTCTTCTTCAAGGAGTTA 57.633 33.333 0.00 0.00 0.00 2.24
162 163 9.892130 AACGATATTTCTTCTTCAAGGAGTTAT 57.108 29.630 0.00 0.00 0.00 1.89
163 164 9.892130 ACGATATTTCTTCTTCAAGGAGTTATT 57.108 29.630 0.00 0.00 0.00 1.40
167 168 7.891183 TTTCTTCTTCAAGGAGTTATTCTCG 57.109 36.000 0.00 0.00 43.60 4.04
168 169 6.835819 TCTTCTTCAAGGAGTTATTCTCGA 57.164 37.500 0.00 0.00 43.60 4.04
169 170 6.857956 TCTTCTTCAAGGAGTTATTCTCGAG 58.142 40.000 5.93 5.93 43.60 4.04
170 171 6.659668 TCTTCTTCAAGGAGTTATTCTCGAGA 59.340 38.462 12.08 12.08 43.60 4.04
171 172 6.835819 TCTTCAAGGAGTTATTCTCGAGAA 57.164 37.500 28.85 28.85 43.60 2.87
172 173 6.622549 TCTTCAAGGAGTTATTCTCGAGAAC 58.377 40.000 29.24 17.95 43.60 3.01
173 174 5.977489 TCAAGGAGTTATTCTCGAGAACA 57.023 39.130 29.24 16.79 43.60 3.18
174 175 6.531503 TCAAGGAGTTATTCTCGAGAACAT 57.468 37.500 29.24 17.33 43.60 2.71
175 176 6.333416 TCAAGGAGTTATTCTCGAGAACATG 58.667 40.000 29.24 17.57 43.60 3.21
176 177 4.688021 AGGAGTTATTCTCGAGAACATGC 58.312 43.478 29.24 18.93 43.60 4.06
177 178 4.160439 AGGAGTTATTCTCGAGAACATGCA 59.840 41.667 29.24 7.40 43.60 3.96
178 179 4.870426 GGAGTTATTCTCGAGAACATGCAA 59.130 41.667 29.24 14.98 43.60 4.08
179 180 5.006165 GGAGTTATTCTCGAGAACATGCAAG 59.994 44.000 29.24 0.00 43.60 4.01
180 181 5.724328 AGTTATTCTCGAGAACATGCAAGA 58.276 37.500 29.24 4.99 36.80 3.02
181 182 6.166279 AGTTATTCTCGAGAACATGCAAGAA 58.834 36.000 29.24 6.99 36.80 2.52
182 183 6.820656 AGTTATTCTCGAGAACATGCAAGAAT 59.179 34.615 29.24 12.31 36.80 2.40
183 184 7.981789 AGTTATTCTCGAGAACATGCAAGAATA 59.018 33.333 29.24 11.32 36.80 1.75
184 185 6.841443 ATTCTCGAGAACATGCAAGAATAG 57.159 37.500 29.24 0.00 36.80 1.73
185 186 5.330455 TCTCGAGAACATGCAAGAATAGT 57.670 39.130 14.01 0.00 0.00 2.12
186 187 5.344066 TCTCGAGAACATGCAAGAATAGTC 58.656 41.667 14.01 0.00 0.00 2.59
187 188 5.126222 TCTCGAGAACATGCAAGAATAGTCT 59.874 40.000 14.01 0.00 34.72 3.24
188 189 5.724328 TCGAGAACATGCAAGAATAGTCTT 58.276 37.500 0.00 0.00 45.36 3.01
189 190 6.863275 TCGAGAACATGCAAGAATAGTCTTA 58.137 36.000 4.91 0.00 42.45 2.10
190 191 7.492524 TCGAGAACATGCAAGAATAGTCTTAT 58.507 34.615 4.91 0.00 42.45 1.73
191 192 8.630037 TCGAGAACATGCAAGAATAGTCTTATA 58.370 33.333 4.91 0.00 42.45 0.98
192 193 9.416794 CGAGAACATGCAAGAATAGTCTTATAT 57.583 33.333 4.91 0.57 42.45 0.86
219 220 9.844790 TTTTGCTAGTTTTGTAATCTGATCATG 57.155 29.630 0.00 0.00 0.00 3.07
220 221 8.791327 TTGCTAGTTTTGTAATCTGATCATGA 57.209 30.769 0.00 0.00 0.00 3.07
221 222 8.969260 TGCTAGTTTTGTAATCTGATCATGAT 57.031 30.769 8.25 8.25 0.00 2.45
222 223 8.833493 TGCTAGTTTTGTAATCTGATCATGATG 58.167 33.333 14.30 0.00 0.00 3.07
223 224 7.802251 GCTAGTTTTGTAATCTGATCATGATGC 59.198 37.037 14.30 5.60 0.00 3.91
224 225 7.876936 AGTTTTGTAATCTGATCATGATGCT 57.123 32.000 14.30 0.00 0.00 3.79
225 226 7.928103 AGTTTTGTAATCTGATCATGATGCTC 58.072 34.615 14.30 0.00 0.00 4.26
226 227 7.555195 AGTTTTGTAATCTGATCATGATGCTCA 59.445 33.333 14.30 5.05 0.00 4.26
227 228 7.492352 TTTGTAATCTGATCATGATGCTCAG 57.508 36.000 17.67 17.67 40.80 3.35
228 229 5.548406 TGTAATCTGATCATGATGCTCAGG 58.452 41.667 21.85 7.61 40.10 3.86
229 230 3.704800 ATCTGATCATGATGCTCAGGG 57.295 47.619 21.85 3.38 40.10 4.45
230 231 1.071857 TCTGATCATGATGCTCAGGGC 59.928 52.381 21.85 0.00 40.10 5.19
241 242 1.831580 GCTCAGGGCATTGAACTTCT 58.168 50.000 0.00 0.00 41.35 2.85
242 243 1.742268 GCTCAGGGCATTGAACTTCTC 59.258 52.381 0.00 0.00 41.35 2.87
243 244 2.877300 GCTCAGGGCATTGAACTTCTCA 60.877 50.000 0.00 0.00 41.35 3.27
244 245 2.746362 CTCAGGGCATTGAACTTCTCAC 59.254 50.000 0.00 0.00 32.21 3.51
245 246 2.373169 TCAGGGCATTGAACTTCTCACT 59.627 45.455 0.00 0.00 32.21 3.41
246 247 3.152341 CAGGGCATTGAACTTCTCACTT 58.848 45.455 0.00 0.00 32.21 3.16
247 248 3.571401 CAGGGCATTGAACTTCTCACTTT 59.429 43.478 0.00 0.00 32.21 2.66
248 249 3.571401 AGGGCATTGAACTTCTCACTTTG 59.429 43.478 0.00 0.00 32.21 2.77
249 250 3.311966 GGCATTGAACTTCTCACTTTGC 58.688 45.455 0.00 0.00 35.44 3.68
250 251 3.243501 GGCATTGAACTTCTCACTTTGCA 60.244 43.478 0.00 0.00 36.82 4.08
251 252 4.553323 GCATTGAACTTCTCACTTTGCAT 58.447 39.130 0.00 0.00 35.89 3.96
252 253 4.620184 GCATTGAACTTCTCACTTTGCATC 59.380 41.667 0.00 0.00 35.89 3.91
253 254 5.564259 GCATTGAACTTCTCACTTTGCATCT 60.564 40.000 0.00 0.00 35.89 2.90
254 255 6.444633 CATTGAACTTCTCACTTTGCATCTT 58.555 36.000 0.00 0.00 32.21 2.40
255 256 6.455360 TTGAACTTCTCACTTTGCATCTTT 57.545 33.333 0.00 0.00 32.21 2.52
256 257 7.566760 TTGAACTTCTCACTTTGCATCTTTA 57.433 32.000 0.00 0.00 32.21 1.85
257 258 7.194607 TGAACTTCTCACTTTGCATCTTTAG 57.805 36.000 0.00 0.00 0.00 1.85
258 259 6.205464 TGAACTTCTCACTTTGCATCTTTAGG 59.795 38.462 0.00 0.00 0.00 2.69
259 260 5.869579 ACTTCTCACTTTGCATCTTTAGGA 58.130 37.500 0.00 0.00 0.00 2.94
260 261 6.479884 ACTTCTCACTTTGCATCTTTAGGAT 58.520 36.000 0.00 0.00 34.51 3.24
261 262 6.597280 ACTTCTCACTTTGCATCTTTAGGATC 59.403 38.462 0.00 0.00 31.27 3.36
262 263 5.431765 TCTCACTTTGCATCTTTAGGATCC 58.568 41.667 2.48 2.48 31.27 3.36
263 264 5.190528 TCTCACTTTGCATCTTTAGGATCCT 59.809 40.000 20.48 20.48 31.27 3.24
264 265 5.819991 TCACTTTGCATCTTTAGGATCCTT 58.180 37.500 22.03 4.11 31.27 3.36
265 266 5.882557 TCACTTTGCATCTTTAGGATCCTTC 59.117 40.000 22.03 1.70 31.27 3.46
266 267 5.067023 CACTTTGCATCTTTAGGATCCTTCC 59.933 44.000 22.03 0.00 42.96 3.46
276 277 2.719531 GGATCCTTCCTTCAACTCCC 57.280 55.000 3.84 0.00 39.14 4.30
277 278 2.200955 GGATCCTTCCTTCAACTCCCT 58.799 52.381 3.84 0.00 39.14 4.20
278 279 2.171659 GGATCCTTCCTTCAACTCCCTC 59.828 54.545 3.84 0.00 39.14 4.30
279 280 2.723530 TCCTTCCTTCAACTCCCTCT 57.276 50.000 0.00 0.00 0.00 3.69
280 281 2.541466 TCCTTCCTTCAACTCCCTCTC 58.459 52.381 0.00 0.00 0.00 3.20
281 282 2.158158 TCCTTCCTTCAACTCCCTCTCA 60.158 50.000 0.00 0.00 0.00 3.27
282 283 2.235898 CCTTCCTTCAACTCCCTCTCAG 59.764 54.545 0.00 0.00 0.00 3.35
283 284 3.169099 CTTCCTTCAACTCCCTCTCAGA 58.831 50.000 0.00 0.00 0.00 3.27
284 285 2.813907 TCCTTCAACTCCCTCTCAGAG 58.186 52.381 0.00 0.00 37.39 3.35
285 286 2.110899 TCCTTCAACTCCCTCTCAGAGT 59.889 50.000 0.00 0.00 46.50 3.24
291 292 3.252554 ACTCCCTCTCAGAGTTTCTGT 57.747 47.619 0.00 0.00 44.58 3.41
292 293 3.582164 ACTCCCTCTCAGAGTTTCTGTT 58.418 45.455 0.00 0.00 44.58 3.16
293 294 3.323403 ACTCCCTCTCAGAGTTTCTGTTG 59.677 47.826 0.00 1.91 44.58 3.33
294 295 3.309296 TCCCTCTCAGAGTTTCTGTTGT 58.691 45.455 0.00 0.00 44.58 3.32
295 296 4.480115 TCCCTCTCAGAGTTTCTGTTGTA 58.520 43.478 0.00 0.00 44.58 2.41
296 297 5.087323 TCCCTCTCAGAGTTTCTGTTGTAT 58.913 41.667 0.00 0.00 44.58 2.29
297 298 5.186021 TCCCTCTCAGAGTTTCTGTTGTATC 59.814 44.000 0.00 0.00 44.58 2.24
298 299 5.186797 CCCTCTCAGAGTTTCTGTTGTATCT 59.813 44.000 0.00 0.00 44.58 1.98
299 300 6.329496 CCTCTCAGAGTTTCTGTTGTATCTC 58.671 44.000 0.00 0.00 44.58 2.75
300 301 6.152661 CCTCTCAGAGTTTCTGTTGTATCTCT 59.847 42.308 0.00 0.00 44.58 3.10
301 302 7.309744 CCTCTCAGAGTTTCTGTTGTATCTCTT 60.310 40.741 0.00 0.00 44.58 2.85
302 303 7.598278 TCTCAGAGTTTCTGTTGTATCTCTTC 58.402 38.462 6.03 0.00 44.58 2.87
303 304 7.450014 TCTCAGAGTTTCTGTTGTATCTCTTCT 59.550 37.037 6.03 0.00 44.58 2.85
304 305 7.957002 TCAGAGTTTCTGTTGTATCTCTTCTT 58.043 34.615 6.03 0.00 44.58 2.52
305 306 8.085296 TCAGAGTTTCTGTTGTATCTCTTCTTC 58.915 37.037 6.03 0.00 44.58 2.87
306 307 8.087750 CAGAGTTTCTGTTGTATCTCTTCTTCT 58.912 37.037 0.00 0.00 39.58 2.85
307 308 8.646900 AGAGTTTCTGTTGTATCTCTTCTTCTT 58.353 33.333 0.00 0.00 0.00 2.52
308 309 8.825667 AGTTTCTGTTGTATCTCTTCTTCTTC 57.174 34.615 0.00 0.00 0.00 2.87
309 310 8.646900 AGTTTCTGTTGTATCTCTTCTTCTTCT 58.353 33.333 0.00 0.00 0.00 2.85
310 311 8.921670 GTTTCTGTTGTATCTCTTCTTCTTCTC 58.078 37.037 0.00 0.00 0.00 2.87
311 312 8.415950 TTCTGTTGTATCTCTTCTTCTTCTCT 57.584 34.615 0.00 0.00 0.00 3.10
312 313 8.415950 TCTGTTGTATCTCTTCTTCTTCTCTT 57.584 34.615 0.00 0.00 0.00 2.85
313 314 8.865090 TCTGTTGTATCTCTTCTTCTTCTCTTT 58.135 33.333 0.00 0.00 0.00 2.52
314 315 9.487790 CTGTTGTATCTCTTCTTCTTCTCTTTT 57.512 33.333 0.00 0.00 0.00 2.27
315 316 9.838339 TGTTGTATCTCTTCTTCTTCTCTTTTT 57.162 29.630 0.00 0.00 0.00 1.94
337 338 6.942532 TTTTGCAGAACTTTGTATCTGACT 57.057 33.333 6.95 0.00 44.64 3.41
338 339 6.942532 TTTGCAGAACTTTGTATCTGACTT 57.057 33.333 6.95 0.00 44.64 3.01
339 340 8.445275 TTTTGCAGAACTTTGTATCTGACTTA 57.555 30.769 6.95 0.00 44.64 2.24
340 341 8.621532 TTTGCAGAACTTTGTATCTGACTTAT 57.378 30.769 6.95 0.00 44.64 1.73
341 342 9.719355 TTTGCAGAACTTTGTATCTGACTTATA 57.281 29.630 6.95 0.00 44.64 0.98
342 343 8.703604 TGCAGAACTTTGTATCTGACTTATAC 57.296 34.615 6.95 0.00 44.64 1.47
343 344 8.531982 TGCAGAACTTTGTATCTGACTTATACT 58.468 33.333 6.95 0.00 44.64 2.12
347 348 9.747293 GAACTTTGTATCTGACTTATACTACCC 57.253 37.037 0.00 0.00 32.19 3.69
348 349 9.490083 AACTTTGTATCTGACTTATACTACCCT 57.510 33.333 0.00 0.00 32.19 4.34
349 350 9.490083 ACTTTGTATCTGACTTATACTACCCTT 57.510 33.333 0.00 0.00 32.19 3.95
352 353 9.483489 TTGTATCTGACTTATACTACCCTTTGA 57.517 33.333 0.00 0.00 32.19 2.69
353 354 9.132923 TGTATCTGACTTATACTACCCTTTGAG 57.867 37.037 0.00 0.00 32.19 3.02
354 355 6.466885 TCTGACTTATACTACCCTTTGAGC 57.533 41.667 0.00 0.00 0.00 4.26
355 356 6.195700 TCTGACTTATACTACCCTTTGAGCT 58.804 40.000 0.00 0.00 0.00 4.09
356 357 6.096987 TCTGACTTATACTACCCTTTGAGCTG 59.903 42.308 0.00 0.00 0.00 4.24
357 358 5.955959 TGACTTATACTACCCTTTGAGCTGA 59.044 40.000 0.00 0.00 0.00 4.26
358 359 6.439375 TGACTTATACTACCCTTTGAGCTGAA 59.561 38.462 0.00 0.00 0.00 3.02
359 360 7.125811 TGACTTATACTACCCTTTGAGCTGAAT 59.874 37.037 0.00 0.00 0.00 2.57
360 361 7.275920 ACTTATACTACCCTTTGAGCTGAATG 58.724 38.462 0.00 0.00 0.00 2.67
361 362 3.356529 ACTACCCTTTGAGCTGAATGG 57.643 47.619 10.41 10.41 0.00 3.16
362 363 2.912956 ACTACCCTTTGAGCTGAATGGA 59.087 45.455 17.74 0.02 0.00 3.41
363 364 2.978156 ACCCTTTGAGCTGAATGGAA 57.022 45.000 17.74 0.00 0.00 3.53
364 365 3.463048 ACCCTTTGAGCTGAATGGAAT 57.537 42.857 17.74 4.46 0.00 3.01
365 366 4.591321 ACCCTTTGAGCTGAATGGAATA 57.409 40.909 17.74 0.00 0.00 1.75
366 367 5.134725 ACCCTTTGAGCTGAATGGAATAT 57.865 39.130 17.74 0.02 0.00 1.28
367 368 5.522641 ACCCTTTGAGCTGAATGGAATATT 58.477 37.500 17.74 0.00 0.00 1.28
368 369 5.960202 ACCCTTTGAGCTGAATGGAATATTT 59.040 36.000 17.74 0.00 0.00 1.40
369 370 6.127253 ACCCTTTGAGCTGAATGGAATATTTG 60.127 38.462 17.74 3.56 0.00 2.32
370 371 6.278363 CCTTTGAGCTGAATGGAATATTTGG 58.722 40.000 11.77 0.00 0.00 3.28
371 372 4.924305 TGAGCTGAATGGAATATTTGGC 57.076 40.909 0.00 0.00 0.00 4.52
372 373 4.279982 TGAGCTGAATGGAATATTTGGCA 58.720 39.130 0.00 0.00 0.00 4.92
373 374 4.098349 TGAGCTGAATGGAATATTTGGCAC 59.902 41.667 0.00 0.00 0.00 5.01
374 375 3.385755 AGCTGAATGGAATATTTGGCACC 59.614 43.478 0.00 0.00 0.00 5.01
375 376 3.385755 GCTGAATGGAATATTTGGCACCT 59.614 43.478 0.00 0.00 0.00 4.00
376 377 4.141869 GCTGAATGGAATATTTGGCACCTT 60.142 41.667 0.00 0.00 0.00 3.50
377 378 5.341872 TGAATGGAATATTTGGCACCTTG 57.658 39.130 0.00 0.00 0.00 3.61
378 379 4.161942 TGAATGGAATATTTGGCACCTTGG 59.838 41.667 0.00 0.00 0.00 3.61
379 380 3.182887 TGGAATATTTGGCACCTTGGT 57.817 42.857 0.00 0.00 0.00 3.67
380 381 2.830923 TGGAATATTTGGCACCTTGGTG 59.169 45.455 14.94 14.94 0.00 4.17
387 388 2.521708 GCACCTTGGTGCCTTGGT 60.522 61.111 28.75 0.00 43.99 3.67
388 389 2.133641 GCACCTTGGTGCCTTGGTT 61.134 57.895 28.75 0.00 43.99 3.67
389 390 1.685355 GCACCTTGGTGCCTTGGTTT 61.685 55.000 28.75 0.00 43.99 3.27
390 391 1.698506 CACCTTGGTGCCTTGGTTTA 58.301 50.000 6.88 0.00 0.00 2.01
391 392 2.247358 CACCTTGGTGCCTTGGTTTAT 58.753 47.619 6.88 0.00 0.00 1.40
392 393 2.632512 CACCTTGGTGCCTTGGTTTATT 59.367 45.455 6.88 0.00 0.00 1.40
393 394 2.897326 ACCTTGGTGCCTTGGTTTATTC 59.103 45.455 0.00 0.00 0.00 1.75
394 395 2.896685 CCTTGGTGCCTTGGTTTATTCA 59.103 45.455 0.00 0.00 0.00 2.57
395 396 3.323403 CCTTGGTGCCTTGGTTTATTCAA 59.677 43.478 0.00 0.00 0.00 2.69
396 397 4.202305 CCTTGGTGCCTTGGTTTATTCAAA 60.202 41.667 0.00 0.00 0.00 2.69
397 398 5.359194 TTGGTGCCTTGGTTTATTCAAAA 57.641 34.783 0.00 0.00 0.00 2.44
398 399 5.359194 TGGTGCCTTGGTTTATTCAAAAA 57.641 34.783 0.00 0.00 0.00 1.94
461 462 8.676401 CAAAATTCTCTCAAACAAAAATGGGTT 58.324 29.630 0.00 0.00 0.00 4.11
476 477 2.552367 TGGGTTGTTTTCCTTTTGGGT 58.448 42.857 0.00 0.00 40.87 4.51
522 523 6.299805 AGGTCAATTTGTAGCACATCTCTA 57.700 37.500 0.00 0.00 0.00 2.43
529 530 9.713740 CAATTTGTAGCACATCTCTATTTCTTC 57.286 33.333 0.00 0.00 0.00 2.87
749 750 5.484290 AGCACTTGATACTGGTAGGTACTTT 59.516 40.000 0.00 0.00 41.75 2.66
851 852 3.306917 TGCTTCACCAAGATTTGCATG 57.693 42.857 0.00 0.00 0.00 4.06
871 872 2.292292 TGAACAGTTCTTAAAAGGCGCC 59.708 45.455 21.89 21.89 0.00 6.53
878 879 2.639065 TCTTAAAAGGCGCCGAATCAT 58.361 42.857 23.20 8.11 0.00 2.45
879 880 3.799366 TCTTAAAAGGCGCCGAATCATA 58.201 40.909 23.20 7.05 0.00 2.15
880 881 3.558418 TCTTAAAAGGCGCCGAATCATAC 59.442 43.478 23.20 0.00 0.00 2.39
902 903 5.180271 ACTACTACTAGCTGTCTGTCTGAC 58.820 45.833 0.00 0.00 45.54 3.51
1302 1304 0.546507 TGTGGGAGTATCACCAGGCA 60.547 55.000 0.00 0.00 38.18 4.75
1386 1388 4.117661 GACGGCTCGACCTTCGCT 62.118 66.667 1.50 0.00 40.21 4.93
1495 1497 8.992073 TGTGAGTACTTAATTATATGCATGCAG 58.008 33.333 26.69 11.22 0.00 4.41
1510 1512 1.338136 TGCAGGCCCTAAGTCCTAGC 61.338 60.000 0.00 0.00 0.00 3.42
1521 1526 1.218316 GTCCTAGCAACTCCCGGTG 59.782 63.158 0.00 0.00 0.00 4.94
1660 1677 2.229062 GTGACACAGGAGATGTTCGAGA 59.771 50.000 0.00 0.00 41.41 4.04
1734 1751 3.119096 GCAGGCTCCGACGTTTCC 61.119 66.667 0.00 0.00 0.00 3.13
1797 1814 2.301505 CGGTTCTAATGCTCCGCTG 58.698 57.895 0.00 0.00 36.68 5.18
1884 1904 0.251341 AGGAAGGCATCAACCACCAC 60.251 55.000 0.00 0.00 32.93 4.16
1970 1990 0.107017 ATGCACGCTAGCCTGGATTT 60.107 50.000 13.53 0.00 0.00 2.17
2008 2028 2.655090 TGACAAGATTTGCCAGGACA 57.345 45.000 0.00 0.00 0.00 4.02
2086 2106 0.947180 TCTCGGCGGCTACAAAACAC 60.947 55.000 7.21 0.00 0.00 3.32
2094 2114 1.886542 GGCTACAAAACACCCAAGGAG 59.113 52.381 0.00 0.00 0.00 3.69
2301 2325 2.446435 ACTTGGATGTGTATTGTGGGC 58.554 47.619 0.00 0.00 0.00 5.36
2520 2544 2.182842 GGGCTACCGAATGCAGCAG 61.183 63.158 0.00 0.00 37.02 4.24
2714 2738 7.717568 AGCACTGAAATACGTCTAGATACATT 58.282 34.615 0.00 0.00 0.00 2.71
2715 2739 8.198109 AGCACTGAAATACGTCTAGATACATTT 58.802 33.333 0.00 2.12 0.00 2.32
2868 2892 3.372954 GCACGAGCAAGTACAGGTATAG 58.627 50.000 0.00 0.00 41.58 1.31
2900 2929 8.483307 AAACCATATTGCAATCAAATTCTCAC 57.517 30.769 16.86 0.00 35.56 3.51
2914 2943 6.436847 TCAAATTCTCACCATGCCATTCTTTA 59.563 34.615 0.00 0.00 0.00 1.85
3249 3281 4.696479 AGAATGTCTCAACTTGTCCTGT 57.304 40.909 0.00 0.00 0.00 4.00
3290 3322 1.281899 GAGATAAGGACAGTGCACGC 58.718 55.000 12.01 5.00 0.00 5.34
3291 3323 0.458543 AGATAAGGACAGTGCACGCG 60.459 55.000 12.01 3.53 0.00 6.01
3292 3324 2.025359 GATAAGGACAGTGCACGCGC 62.025 60.000 12.01 0.00 39.24 6.86
3347 3379 5.189928 CAGAGAGAGTAGTGGAGCTTTCTA 58.810 45.833 0.00 0.00 0.00 2.10
3353 3385 3.444388 AGTAGTGGAGCTTTCTAAGTCCG 59.556 47.826 0.00 0.00 33.87 4.79
3447 3479 4.451900 CAGGAACAAGGTACAGACAAACT 58.548 43.478 0.00 0.00 0.00 2.66
3562 3602 0.409484 ACAACCTTCTTCCATGGGGG 59.591 55.000 13.02 9.19 38.37 5.40
3747 3787 0.039798 CACTGACTGCGCTGCAAAAT 60.040 50.000 14.80 0.00 38.41 1.82
3846 3903 2.203337 GGTCTGCTTGTGGTGCCA 60.203 61.111 0.00 0.00 0.00 4.92
3872 3929 8.648693 AGTATTGCCTAGGTTATAATTCGTTCT 58.351 33.333 11.31 0.00 0.00 3.01
3986 4047 7.328737 AGCTACTAATACAGTAATATTGCGCAC 59.671 37.037 11.12 0.00 39.28 5.34
4036 4104 6.473778 CCGTATGTCTCAAGATCTGTTAAGTG 59.526 42.308 0.00 0.00 0.00 3.16
4057 4126 4.364415 GATGTATACATCCGAGCCTCTC 57.636 50.000 28.45 7.21 45.24 3.20
4058 4127 3.181505 GATGTATACATCCGAGCCTCTCG 60.182 52.174 28.45 9.07 45.24 4.04
4144 4213 0.976641 TAGGTTGTGCACAGGAGAGG 59.023 55.000 20.59 0.00 0.00 3.69
4170 4239 5.864474 GTGTACTCCATTTACAGAGACTGTG 59.136 44.000 13.62 5.37 45.01 3.66
4171 4240 4.543590 ACTCCATTTACAGAGACTGTGG 57.456 45.455 13.62 7.11 45.01 4.17
4174 4243 5.542635 ACTCCATTTACAGAGACTGTGGTTA 59.457 40.000 13.62 0.00 45.01 2.85
4175 4244 6.042781 ACTCCATTTACAGAGACTGTGGTTAA 59.957 38.462 13.62 4.53 45.01 2.01
4176 4245 6.833041 TCCATTTACAGAGACTGTGGTTAAA 58.167 36.000 13.62 7.19 45.01 1.52
4177 4246 7.284074 TCCATTTACAGAGACTGTGGTTAAAA 58.716 34.615 13.62 6.88 45.01 1.52
4178 4247 7.444183 TCCATTTACAGAGACTGTGGTTAAAAG 59.556 37.037 13.62 4.56 45.01 2.27
4180 4249 6.488769 TTACAGAGACTGTGGTTAAAAGGA 57.511 37.500 13.62 0.00 45.01 3.36
4181 4250 4.962155 ACAGAGACTGTGGTTAAAAGGAG 58.038 43.478 4.43 0.00 43.63 3.69
4182 4251 4.202367 ACAGAGACTGTGGTTAAAAGGAGG 60.202 45.833 4.43 0.00 43.63 4.30
4185 4254 1.165270 CTGTGGTTAAAAGGAGGGCG 58.835 55.000 0.00 0.00 0.00 6.13
4186 4255 0.891904 TGTGGTTAAAAGGAGGGCGC 60.892 55.000 0.00 0.00 0.00 6.53
4187 4256 1.673009 TGGTTAAAAGGAGGGCGCG 60.673 57.895 0.00 0.00 0.00 6.86
4189 4258 2.038837 GTTAAAAGGAGGGCGCGCT 61.039 57.895 32.29 28.53 0.00 5.92
4273 5011 2.579738 GAGGAGAACCAGCCGTCC 59.420 66.667 0.00 0.00 38.94 4.79
4277 5015 1.005394 GAGAACCAGCCGTCCGAAA 60.005 57.895 0.00 0.00 0.00 3.46
4298 5036 0.971386 AATGGGTTCGACCGTAGTGT 59.029 50.000 0.00 0.00 39.83 3.55
4329 5070 4.016706 ACCCGGCCGACTGAAAGG 62.017 66.667 30.73 20.07 39.30 3.11
4500 5241 2.469826 CGTCCAGCGACAAAGCATATA 58.530 47.619 0.00 0.00 44.77 0.86
4502 5243 3.717707 GTCCAGCGACAAAGCATATAGA 58.282 45.455 0.00 0.00 38.99 1.98
4565 5306 1.957177 TCTCTTTCCGATCGATGGGAG 59.043 52.381 25.52 16.95 36.03 4.30
4566 5307 1.957177 CTCTTTCCGATCGATGGGAGA 59.043 52.381 25.52 21.22 36.03 3.71
4581 5322 2.043450 AGAGGGAGACGAGGCTGG 60.043 66.667 0.00 0.00 0.00 4.85
4631 5372 2.060980 ACGAGACAGGGAGATGGGC 61.061 63.158 0.00 0.00 0.00 5.36
4757 5498 4.690748 TCTCTCAACACGGCATTCTTTTAG 59.309 41.667 0.00 0.00 0.00 1.85
4761 5502 4.213270 TCAACACGGCATTCTTTTAGACTG 59.787 41.667 0.00 0.00 0.00 3.51
4762 5503 4.002906 ACACGGCATTCTTTTAGACTGA 57.997 40.909 0.00 0.00 27.42 3.41
4804 5913 3.044305 GCACCGTGCACCTCTCAC 61.044 66.667 18.79 0.00 44.26 3.51
4825 5934 3.568853 ACTACGTGTAGAGCAACTCTTGT 59.431 43.478 13.69 0.60 41.50 3.16
4875 5984 7.375808 TCGTTGTAATAACCGTTCGTATATGTC 59.624 37.037 0.00 0.00 0.00 3.06
4876 5985 7.165647 CGTTGTAATAACCGTTCGTATATGTCA 59.834 37.037 0.00 0.00 0.00 3.58
4877 5986 8.474577 GTTGTAATAACCGTTCGTATATGTCAG 58.525 37.037 0.00 0.00 0.00 3.51
4880 5990 7.689953 AATAACCGTTCGTATATGTCAGTTC 57.310 36.000 0.00 0.00 0.00 3.01
4883 5993 3.040795 CGTTCGTATATGTCAGTTCGGG 58.959 50.000 0.00 0.00 0.00 5.14
4926 6036 3.159472 AGAATTGCCATTCTGCACTCAA 58.841 40.909 12.00 0.00 46.38 3.02
4933 6043 1.674441 CATTCTGCACTCAATCGCCAT 59.326 47.619 0.00 0.00 0.00 4.40
4934 6044 1.089112 TTCTGCACTCAATCGCCATG 58.911 50.000 0.00 0.00 0.00 3.66
4977 6088 0.820891 AGCCCGCAAGCCTTCATATG 60.821 55.000 0.00 0.00 0.00 1.78
4982 6094 1.767759 GCAAGCCTTCATATGTGGGT 58.232 50.000 13.56 13.56 0.00 4.51
4989 6101 3.626222 GCCTTCATATGTGGGTTTGGGTA 60.626 47.826 15.55 0.00 0.00 3.69
5007 6119 4.080687 GGGTAAGACGATATAGCACTCCT 58.919 47.826 0.00 0.00 0.00 3.69
5017 6129 7.220030 ACGATATAGCACTCCTTTCATCAATT 58.780 34.615 0.00 0.00 0.00 2.32
5018 6130 7.716998 ACGATATAGCACTCCTTTCATCAATTT 59.283 33.333 0.00 0.00 0.00 1.82
5019 6131 8.013947 CGATATAGCACTCCTTTCATCAATTTG 58.986 37.037 0.00 0.00 0.00 2.32
5020 6132 8.757982 ATATAGCACTCCTTTCATCAATTTGT 57.242 30.769 0.00 0.00 0.00 2.83
5021 6133 5.796424 AGCACTCCTTTCATCAATTTGTT 57.204 34.783 0.00 0.00 0.00 2.83
5022 6134 5.535333 AGCACTCCTTTCATCAATTTGTTG 58.465 37.500 1.72 1.72 0.00 3.33
5023 6135 5.302568 AGCACTCCTTTCATCAATTTGTTGA 59.697 36.000 6.14 6.14 35.15 3.18
5024 6136 5.632347 GCACTCCTTTCATCAATTTGTTGAG 59.368 40.000 9.46 2.57 34.02 3.02
5025 6137 6.154445 CACTCCTTTCATCAATTTGTTGAGG 58.846 40.000 9.46 8.92 34.02 3.86
5026 6138 6.016024 CACTCCTTTCATCAATTTGTTGAGGA 60.016 38.462 13.60 13.60 39.59 3.71
5027 6139 6.550854 ACTCCTTTCATCAATTTGTTGAGGAA 59.449 34.615 12.48 12.48 46.02 3.36
5028 6140 6.748132 TCCTTTCATCAATTTGTTGAGGAAC 58.252 36.000 15.19 0.00 46.90 3.62
5029 6141 5.630680 CCTTTCATCAATTTGTTGAGGAACG 59.369 40.000 15.19 13.60 46.90 3.95
5030 6142 5.766150 TTCATCAATTTGTTGAGGAACGT 57.234 34.783 12.48 0.00 43.85 3.99
5031 6143 6.869315 TTCATCAATTTGTTGAGGAACGTA 57.131 33.333 12.48 0.00 43.85 3.57
5032 6144 6.480524 TCATCAATTTGTTGAGGAACGTAG 57.519 37.500 6.14 0.00 38.58 3.51
5033 6145 4.742438 TCAATTTGTTGAGGAACGTAGC 57.258 40.909 0.00 0.00 34.49 3.58
5034 6146 4.130857 TCAATTTGTTGAGGAACGTAGCA 58.869 39.130 0.00 0.00 34.49 3.49
5035 6147 4.759693 TCAATTTGTTGAGGAACGTAGCAT 59.240 37.500 0.00 0.00 34.49 3.79
5036 6148 4.685169 ATTTGTTGAGGAACGTAGCATG 57.315 40.909 0.00 0.00 34.49 4.06
5037 6149 1.438651 TGTTGAGGAACGTAGCATGC 58.561 50.000 10.51 10.51 34.49 4.06
5038 6150 1.270571 TGTTGAGGAACGTAGCATGCA 60.271 47.619 21.98 2.77 34.49 3.96
5039 6151 1.804151 GTTGAGGAACGTAGCATGCAA 59.196 47.619 21.98 0.00 0.00 4.08
5040 6152 2.401583 TGAGGAACGTAGCATGCAAT 57.598 45.000 21.98 1.90 0.00 3.56
5041 6153 2.710377 TGAGGAACGTAGCATGCAATT 58.290 42.857 21.98 7.96 0.00 2.32
5042 6154 3.081061 TGAGGAACGTAGCATGCAATTT 58.919 40.909 21.98 7.02 0.00 1.82
5043 6155 3.505680 TGAGGAACGTAGCATGCAATTTT 59.494 39.130 21.98 7.41 0.00 1.82
5044 6156 4.697828 TGAGGAACGTAGCATGCAATTTTA 59.302 37.500 21.98 0.00 0.00 1.52
5045 6157 5.182190 TGAGGAACGTAGCATGCAATTTTAA 59.818 36.000 21.98 0.00 0.00 1.52
5046 6158 6.019779 AGGAACGTAGCATGCAATTTTAAA 57.980 33.333 21.98 0.00 0.00 1.52
5047 6159 6.451393 AGGAACGTAGCATGCAATTTTAAAA 58.549 32.000 21.98 2.51 0.00 1.52
5048 6160 6.926272 AGGAACGTAGCATGCAATTTTAAAAA 59.074 30.769 21.98 0.00 0.00 1.94
5069 6181 5.856126 AAAATTTCTACGATCACGCAAGA 57.144 34.783 0.00 0.00 43.96 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.311265 TGAATGAGAATGAGCAGAACAAGT 58.689 37.500 0.00 0.00 0.00 3.16
1 2 5.874895 TGAATGAGAATGAGCAGAACAAG 57.125 39.130 0.00 0.00 0.00 3.16
2 3 6.178324 AGATGAATGAGAATGAGCAGAACAA 58.822 36.000 0.00 0.00 0.00 2.83
3 4 5.742063 AGATGAATGAGAATGAGCAGAACA 58.258 37.500 0.00 0.00 0.00 3.18
4 5 6.539464 AGAAGATGAATGAGAATGAGCAGAAC 59.461 38.462 0.00 0.00 0.00 3.01
5 6 6.651086 AGAAGATGAATGAGAATGAGCAGAA 58.349 36.000 0.00 0.00 0.00 3.02
6 7 6.236558 AGAAGATGAATGAGAATGAGCAGA 57.763 37.500 0.00 0.00 0.00 4.26
7 8 5.467399 GGAGAAGATGAATGAGAATGAGCAG 59.533 44.000 0.00 0.00 0.00 4.24
8 9 5.104652 TGGAGAAGATGAATGAGAATGAGCA 60.105 40.000 0.00 0.00 0.00 4.26
9 10 5.366460 TGGAGAAGATGAATGAGAATGAGC 58.634 41.667 0.00 0.00 0.00 4.26
10 11 6.993308 ACATGGAGAAGATGAATGAGAATGAG 59.007 38.462 0.00 0.00 0.00 2.90
11 12 6.896883 ACATGGAGAAGATGAATGAGAATGA 58.103 36.000 0.00 0.00 0.00 2.57
12 13 6.205076 GGACATGGAGAAGATGAATGAGAATG 59.795 42.308 0.00 0.00 0.00 2.67
13 14 6.126565 TGGACATGGAGAAGATGAATGAGAAT 60.127 38.462 0.00 0.00 0.00 2.40
14 15 5.190330 TGGACATGGAGAAGATGAATGAGAA 59.810 40.000 0.00 0.00 0.00 2.87
15 16 4.718276 TGGACATGGAGAAGATGAATGAGA 59.282 41.667 0.00 0.00 0.00 3.27
16 17 5.032327 TGGACATGGAGAAGATGAATGAG 57.968 43.478 0.00 0.00 0.00 2.90
17 18 4.472470 ACTGGACATGGAGAAGATGAATGA 59.528 41.667 0.00 0.00 0.00 2.57
18 19 4.575236 CACTGGACATGGAGAAGATGAATG 59.425 45.833 0.00 0.00 0.00 2.67
19 20 4.384978 CCACTGGACATGGAGAAGATGAAT 60.385 45.833 0.00 0.00 39.87 2.57
20 21 3.054875 CCACTGGACATGGAGAAGATGAA 60.055 47.826 0.00 0.00 39.87 2.57
21 22 2.502947 CCACTGGACATGGAGAAGATGA 59.497 50.000 0.00 0.00 39.87 2.92
22 23 2.915349 CCACTGGACATGGAGAAGATG 58.085 52.381 0.00 0.00 39.87 2.90
23 24 1.211457 GCCACTGGACATGGAGAAGAT 59.789 52.381 0.00 0.00 39.87 2.40
24 25 0.615331 GCCACTGGACATGGAGAAGA 59.385 55.000 0.00 0.00 39.87 2.87
25 26 0.325933 TGCCACTGGACATGGAGAAG 59.674 55.000 0.00 0.00 39.87 2.85
26 27 0.770499 TTGCCACTGGACATGGAGAA 59.230 50.000 0.00 0.00 39.87 2.87
27 28 0.770499 TTTGCCACTGGACATGGAGA 59.230 50.000 0.00 0.00 39.87 3.71
28 29 1.843368 ATTTGCCACTGGACATGGAG 58.157 50.000 0.00 0.00 39.87 3.86
29 30 2.308570 AGTATTTGCCACTGGACATGGA 59.691 45.455 0.00 0.00 39.87 3.41
30 31 2.726821 AGTATTTGCCACTGGACATGG 58.273 47.619 0.00 0.00 40.50 3.66
31 32 4.789012 AAAGTATTTGCCACTGGACATG 57.211 40.909 0.00 0.00 36.60 3.21
32 33 5.304101 TGAAAAAGTATTTGCCACTGGACAT 59.696 36.000 0.00 0.00 39.02 3.06
33 34 4.646945 TGAAAAAGTATTTGCCACTGGACA 59.353 37.500 0.00 0.00 39.02 4.02
34 35 5.195001 TGAAAAAGTATTTGCCACTGGAC 57.805 39.130 0.00 0.00 39.02 4.02
35 36 4.280677 CCTGAAAAAGTATTTGCCACTGGA 59.719 41.667 0.00 0.00 39.02 3.86
36 37 4.039124 ACCTGAAAAAGTATTTGCCACTGG 59.961 41.667 0.00 0.00 39.02 4.00
37 38 5.200368 ACCTGAAAAAGTATTTGCCACTG 57.800 39.130 0.00 0.00 39.02 3.66
38 39 5.869649 AACCTGAAAAAGTATTTGCCACT 57.130 34.783 0.00 0.00 39.02 4.00
39 40 6.536941 TGAAAACCTGAAAAAGTATTTGCCAC 59.463 34.615 0.00 0.00 39.02 5.01
40 41 6.644347 TGAAAACCTGAAAAAGTATTTGCCA 58.356 32.000 0.00 0.00 39.02 4.92
41 42 7.406553 GTTGAAAACCTGAAAAAGTATTTGCC 58.593 34.615 0.00 0.00 42.21 4.52
66 67 2.787473 TGCAACTGGATACCTTCAGG 57.213 50.000 0.00 0.00 42.17 3.86
67 68 3.804325 CGTATGCAACTGGATACCTTCAG 59.196 47.826 13.70 0.00 43.60 3.02
68 69 3.431626 CCGTATGCAACTGGATACCTTCA 60.432 47.826 13.70 0.00 43.60 3.02
69 70 3.131396 CCGTATGCAACTGGATACCTTC 58.869 50.000 13.70 0.00 43.60 3.46
70 71 2.504175 ACCGTATGCAACTGGATACCTT 59.496 45.455 13.70 1.12 43.60 3.50
71 72 2.116238 ACCGTATGCAACTGGATACCT 58.884 47.619 13.70 0.00 43.60 3.08
72 73 2.210116 CACCGTATGCAACTGGATACC 58.790 52.381 13.70 0.00 43.60 2.73
73 74 2.901249 ACACCGTATGCAACTGGATAC 58.099 47.619 10.42 10.42 43.24 2.24
74 75 3.702548 AGTACACCGTATGCAACTGGATA 59.297 43.478 8.30 0.00 0.00 2.59
75 76 2.500098 AGTACACCGTATGCAACTGGAT 59.500 45.455 8.30 0.00 0.00 3.41
76 77 1.897133 AGTACACCGTATGCAACTGGA 59.103 47.619 8.30 0.00 0.00 3.86
77 78 1.999735 CAGTACACCGTATGCAACTGG 59.000 52.381 0.00 0.00 39.95 4.00
78 79 2.683968 ACAGTACACCGTATGCAACTG 58.316 47.619 8.90 8.90 45.11 3.16
79 80 3.396260 AACAGTACACCGTATGCAACT 57.604 42.857 0.00 0.00 0.00 3.16
80 81 3.744426 AGAAACAGTACACCGTATGCAAC 59.256 43.478 0.00 0.00 0.00 4.17
81 82 3.997762 AGAAACAGTACACCGTATGCAA 58.002 40.909 0.00 0.00 0.00 4.08
82 83 3.671008 AGAAACAGTACACCGTATGCA 57.329 42.857 0.00 0.00 0.00 3.96
83 84 5.501897 GCATTAGAAACAGTACACCGTATGC 60.502 44.000 0.00 0.00 0.00 3.14
84 85 5.579119 TGCATTAGAAACAGTACACCGTATG 59.421 40.000 0.00 0.00 0.00 2.39
85 86 5.726397 TGCATTAGAAACAGTACACCGTAT 58.274 37.500 0.00 0.00 0.00 3.06
86 87 5.136816 TGCATTAGAAACAGTACACCGTA 57.863 39.130 0.00 0.00 0.00 4.02
87 88 3.997762 TGCATTAGAAACAGTACACCGT 58.002 40.909 0.00 0.00 0.00 4.83
88 89 4.669197 GCTTGCATTAGAAACAGTACACCG 60.669 45.833 0.00 0.00 0.00 4.94
89 90 4.215399 TGCTTGCATTAGAAACAGTACACC 59.785 41.667 0.00 0.00 0.00 4.16
90 91 5.356882 TGCTTGCATTAGAAACAGTACAC 57.643 39.130 0.00 0.00 0.00 2.90
91 92 6.384258 TTTGCTTGCATTAGAAACAGTACA 57.616 33.333 0.00 0.00 0.00 2.90
92 93 7.062255 GGATTTTGCTTGCATTAGAAACAGTAC 59.938 37.037 0.00 0.00 0.00 2.73
93 94 7.090173 GGATTTTGCTTGCATTAGAAACAGTA 58.910 34.615 0.00 0.00 0.00 2.74
94 95 5.928264 GGATTTTGCTTGCATTAGAAACAGT 59.072 36.000 0.00 0.00 0.00 3.55
95 96 5.927689 TGGATTTTGCTTGCATTAGAAACAG 59.072 36.000 0.00 0.00 0.00 3.16
96 97 5.851720 TGGATTTTGCTTGCATTAGAAACA 58.148 33.333 0.00 0.00 0.00 2.83
97 98 5.928264 ACTGGATTTTGCTTGCATTAGAAAC 59.072 36.000 0.00 0.00 0.00 2.78
98 99 6.100404 ACTGGATTTTGCTTGCATTAGAAA 57.900 33.333 0.00 0.00 0.00 2.52
99 100 5.726980 ACTGGATTTTGCTTGCATTAGAA 57.273 34.783 0.00 0.00 0.00 2.10
100 101 5.472148 CAACTGGATTTTGCTTGCATTAGA 58.528 37.500 0.00 0.00 0.00 2.10
101 102 4.092383 GCAACTGGATTTTGCTTGCATTAG 59.908 41.667 0.00 0.00 44.96 1.73
102 103 3.995705 GCAACTGGATTTTGCTTGCATTA 59.004 39.130 0.00 0.00 44.96 1.90
103 104 2.809696 GCAACTGGATTTTGCTTGCATT 59.190 40.909 0.00 0.00 44.96 3.56
104 105 2.419667 GCAACTGGATTTTGCTTGCAT 58.580 42.857 0.00 0.00 44.96 3.96
105 106 1.868469 GCAACTGGATTTTGCTTGCA 58.132 45.000 0.00 0.00 44.96 4.08
111 112 6.541278 TCATCTAGATCTGCAACTGGATTTTG 59.459 38.462 5.18 4.07 33.34 2.44
112 113 6.656902 TCATCTAGATCTGCAACTGGATTTT 58.343 36.000 5.18 0.00 33.34 1.82
113 114 6.244552 TCATCTAGATCTGCAACTGGATTT 57.755 37.500 5.18 0.00 33.34 2.17
114 115 5.883685 TCATCTAGATCTGCAACTGGATT 57.116 39.130 5.18 0.00 33.34 3.01
115 116 5.609423 GTTCATCTAGATCTGCAACTGGAT 58.391 41.667 5.18 7.78 35.36 3.41
116 117 4.440663 CGTTCATCTAGATCTGCAACTGGA 60.441 45.833 5.18 0.00 0.00 3.86
117 118 3.801050 CGTTCATCTAGATCTGCAACTGG 59.199 47.826 5.18 0.00 0.00 4.00
118 119 4.676546 TCGTTCATCTAGATCTGCAACTG 58.323 43.478 5.18 0.00 0.00 3.16
119 120 4.991153 TCGTTCATCTAGATCTGCAACT 57.009 40.909 5.18 0.00 0.00 3.16
120 121 7.881643 AATATCGTTCATCTAGATCTGCAAC 57.118 36.000 5.18 3.22 0.00 4.17
121 122 8.363390 AGAAATATCGTTCATCTAGATCTGCAA 58.637 33.333 5.18 0.00 0.00 4.08
122 123 7.890515 AGAAATATCGTTCATCTAGATCTGCA 58.109 34.615 5.18 0.00 0.00 4.41
123 124 8.755696 AAGAAATATCGTTCATCTAGATCTGC 57.244 34.615 5.18 0.00 0.00 4.26
130 131 9.534565 CCTTGAAGAAGAAATATCGTTCATCTA 57.465 33.333 0.00 0.00 35.17 1.98
131 132 8.260818 TCCTTGAAGAAGAAATATCGTTCATCT 58.739 33.333 0.00 0.00 37.20 2.90
132 133 8.425577 TCCTTGAAGAAGAAATATCGTTCATC 57.574 34.615 0.00 0.00 30.13 2.92
133 134 8.043710 ACTCCTTGAAGAAGAAATATCGTTCAT 58.956 33.333 0.00 0.00 30.13 2.57
134 135 7.386851 ACTCCTTGAAGAAGAAATATCGTTCA 58.613 34.615 0.00 0.00 0.00 3.18
135 136 7.835634 ACTCCTTGAAGAAGAAATATCGTTC 57.164 36.000 0.00 0.00 0.00 3.95
136 137 9.892130 ATAACTCCTTGAAGAAGAAATATCGTT 57.108 29.630 0.00 0.00 0.00 3.85
137 138 9.892130 AATAACTCCTTGAAGAAGAAATATCGT 57.108 29.630 0.00 0.00 0.00 3.73
141 142 9.587772 CGAGAATAACTCCTTGAAGAAGAAATA 57.412 33.333 0.00 0.00 42.18 1.40
142 143 8.314751 TCGAGAATAACTCCTTGAAGAAGAAAT 58.685 33.333 0.00 0.00 42.18 2.17
143 144 7.667557 TCGAGAATAACTCCTTGAAGAAGAAA 58.332 34.615 0.00 0.00 42.18 2.52
144 145 7.176865 TCTCGAGAATAACTCCTTGAAGAAGAA 59.823 37.037 14.01 0.00 42.18 2.52
145 146 6.659668 TCTCGAGAATAACTCCTTGAAGAAGA 59.340 38.462 14.01 0.00 42.18 2.87
146 147 6.857956 TCTCGAGAATAACTCCTTGAAGAAG 58.142 40.000 14.01 0.00 42.18 2.85
147 148 6.835819 TCTCGAGAATAACTCCTTGAAGAA 57.164 37.500 14.01 0.00 42.18 2.52
148 149 6.208797 TGTTCTCGAGAATAACTCCTTGAAGA 59.791 38.462 29.29 0.00 42.18 2.87
149 150 6.390721 TGTTCTCGAGAATAACTCCTTGAAG 58.609 40.000 29.29 0.00 42.18 3.02
150 151 6.340962 TGTTCTCGAGAATAACTCCTTGAA 57.659 37.500 29.29 0.53 42.18 2.69
151 152 5.977489 TGTTCTCGAGAATAACTCCTTGA 57.023 39.130 29.29 0.75 42.18 3.02
152 153 5.006165 GCATGTTCTCGAGAATAACTCCTTG 59.994 44.000 29.29 21.49 42.18 3.61
153 154 5.112686 GCATGTTCTCGAGAATAACTCCTT 58.887 41.667 29.29 11.57 42.18 3.36
154 155 4.160439 TGCATGTTCTCGAGAATAACTCCT 59.840 41.667 29.29 9.89 42.18 3.69
155 156 4.433615 TGCATGTTCTCGAGAATAACTCC 58.566 43.478 29.29 16.25 42.18 3.85
156 157 5.807520 TCTTGCATGTTCTCGAGAATAACTC 59.192 40.000 29.29 16.93 41.79 3.01
157 158 5.724328 TCTTGCATGTTCTCGAGAATAACT 58.276 37.500 29.29 11.34 36.33 2.24
158 159 6.408858 TTCTTGCATGTTCTCGAGAATAAC 57.591 37.500 29.29 21.86 36.33 1.89
159 160 7.981789 ACTATTCTTGCATGTTCTCGAGAATAA 59.018 33.333 29.29 20.87 41.49 1.40
160 161 7.492524 ACTATTCTTGCATGTTCTCGAGAATA 58.507 34.615 29.29 26.72 41.34 1.75
161 162 6.344500 ACTATTCTTGCATGTTCTCGAGAAT 58.656 36.000 29.29 13.13 42.77 2.40
162 163 5.724328 ACTATTCTTGCATGTTCTCGAGAA 58.276 37.500 23.74 23.74 37.19 2.87
163 164 5.126222 AGACTATTCTTGCATGTTCTCGAGA 59.874 40.000 12.08 12.08 0.00 4.04
164 165 5.347342 AGACTATTCTTGCATGTTCTCGAG 58.653 41.667 5.93 5.93 0.00 4.04
165 166 5.330455 AGACTATTCTTGCATGTTCTCGA 57.670 39.130 0.00 0.00 0.00 4.04
166 167 7.706281 ATAAGACTATTCTTGCATGTTCTCG 57.294 36.000 5.63 0.00 42.41 4.04
193 194 9.844790 CATGATCAGATTACAAAACTAGCAAAA 57.155 29.630 0.09 0.00 0.00 2.44
194 195 9.230122 TCATGATCAGATTACAAAACTAGCAAA 57.770 29.630 0.09 0.00 0.00 3.68
195 196 8.791327 TCATGATCAGATTACAAAACTAGCAA 57.209 30.769 0.09 0.00 0.00 3.91
196 197 8.833493 CATCATGATCAGATTACAAAACTAGCA 58.167 33.333 4.86 0.00 0.00 3.49
197 198 7.802251 GCATCATGATCAGATTACAAAACTAGC 59.198 37.037 4.86 0.00 0.00 3.42
198 199 9.053840 AGCATCATGATCAGATTACAAAACTAG 57.946 33.333 4.86 0.00 0.00 2.57
199 200 8.969260 AGCATCATGATCAGATTACAAAACTA 57.031 30.769 4.86 0.00 0.00 2.24
200 201 7.555195 TGAGCATCATGATCAGATTACAAAACT 59.445 33.333 4.86 0.00 42.56 2.66
201 202 7.700505 TGAGCATCATGATCAGATTACAAAAC 58.299 34.615 4.86 0.00 42.56 2.43
202 203 7.868906 TGAGCATCATGATCAGATTACAAAA 57.131 32.000 4.86 0.00 42.56 2.44
222 223 1.742268 GAGAAGTTCAATGCCCTGAGC 59.258 52.381 5.50 0.00 44.14 4.26
223 224 2.746362 GTGAGAAGTTCAATGCCCTGAG 59.254 50.000 5.50 0.00 37.61 3.35
224 225 2.373169 AGTGAGAAGTTCAATGCCCTGA 59.627 45.455 5.50 0.00 37.61 3.86
225 226 2.787994 AGTGAGAAGTTCAATGCCCTG 58.212 47.619 5.50 0.00 37.61 4.45
226 227 3.515602 AAGTGAGAAGTTCAATGCCCT 57.484 42.857 5.50 0.00 37.61 5.19
227 228 3.858503 GCAAAGTGAGAAGTTCAATGCCC 60.859 47.826 5.50 0.00 37.61 5.36
228 229 3.243501 TGCAAAGTGAGAAGTTCAATGCC 60.244 43.478 5.50 0.00 39.51 4.40
229 230 3.968649 TGCAAAGTGAGAAGTTCAATGC 58.031 40.909 5.50 6.62 40.13 3.56
230 231 6.010294 AGATGCAAAGTGAGAAGTTCAATG 57.990 37.500 5.50 0.00 37.61 2.82
231 232 6.645790 AAGATGCAAAGTGAGAAGTTCAAT 57.354 33.333 5.50 0.00 37.61 2.57
232 233 6.455360 AAAGATGCAAAGTGAGAAGTTCAA 57.545 33.333 5.50 0.00 37.61 2.69
233 234 6.205464 CCTAAAGATGCAAAGTGAGAAGTTCA 59.795 38.462 5.50 0.00 0.00 3.18
234 235 6.428159 TCCTAAAGATGCAAAGTGAGAAGTTC 59.572 38.462 0.00 0.00 0.00 3.01
235 236 6.299141 TCCTAAAGATGCAAAGTGAGAAGTT 58.701 36.000 0.00 0.00 0.00 2.66
236 237 5.869579 TCCTAAAGATGCAAAGTGAGAAGT 58.130 37.500 0.00 0.00 0.00 3.01
237 238 6.038050 GGATCCTAAAGATGCAAAGTGAGAAG 59.962 42.308 3.84 0.00 42.63 2.85
238 239 5.882557 GGATCCTAAAGATGCAAAGTGAGAA 59.117 40.000 3.84 0.00 42.63 2.87
239 240 5.190528 AGGATCCTAAAGATGCAAAGTGAGA 59.809 40.000 14.27 0.00 45.38 3.27
240 241 5.435291 AGGATCCTAAAGATGCAAAGTGAG 58.565 41.667 14.27 0.00 45.38 3.51
241 242 5.441718 AGGATCCTAAAGATGCAAAGTGA 57.558 39.130 14.27 0.00 45.38 3.41
242 243 5.067023 GGAAGGATCCTAAAGATGCAAAGTG 59.933 44.000 16.55 0.00 45.38 3.16
243 244 5.196695 GGAAGGATCCTAAAGATGCAAAGT 58.803 41.667 16.55 0.00 45.38 2.66
244 245 5.764487 GGAAGGATCCTAAAGATGCAAAG 57.236 43.478 16.55 0.00 45.38 2.77
257 258 2.171659 GAGGGAGTTGAAGGAAGGATCC 59.828 54.545 2.48 2.48 46.98 3.36
258 259 3.111484 AGAGGGAGTTGAAGGAAGGATC 58.889 50.000 0.00 0.00 0.00 3.36
259 260 3.111484 GAGAGGGAGTTGAAGGAAGGAT 58.889 50.000 0.00 0.00 0.00 3.24
260 261 2.158158 TGAGAGGGAGTTGAAGGAAGGA 60.158 50.000 0.00 0.00 0.00 3.36
261 262 2.235898 CTGAGAGGGAGTTGAAGGAAGG 59.764 54.545 0.00 0.00 0.00 3.46
262 263 3.169099 TCTGAGAGGGAGTTGAAGGAAG 58.831 50.000 0.00 0.00 0.00 3.46
263 264 3.169099 CTCTGAGAGGGAGTTGAAGGAA 58.831 50.000 0.36 0.00 0.00 3.36
264 265 2.110899 ACTCTGAGAGGGAGTTGAAGGA 59.889 50.000 14.83 0.00 40.65 3.36
265 266 2.534990 ACTCTGAGAGGGAGTTGAAGG 58.465 52.381 14.83 0.00 40.65 3.46
281 282 8.189119 AGAAGAAGAGATACAACAGAAACTCT 57.811 34.615 0.00 0.00 36.48 3.24
282 283 8.825667 AAGAAGAAGAGATACAACAGAAACTC 57.174 34.615 0.00 0.00 0.00 3.01
283 284 8.646900 AGAAGAAGAAGAGATACAACAGAAACT 58.353 33.333 0.00 0.00 0.00 2.66
284 285 8.825667 AGAAGAAGAAGAGATACAACAGAAAC 57.174 34.615 0.00 0.00 0.00 2.78
285 286 8.865090 AGAGAAGAAGAAGAGATACAACAGAAA 58.135 33.333 0.00 0.00 0.00 2.52
286 287 8.415950 AGAGAAGAAGAAGAGATACAACAGAA 57.584 34.615 0.00 0.00 0.00 3.02
287 288 8.415950 AAGAGAAGAAGAAGAGATACAACAGA 57.584 34.615 0.00 0.00 0.00 3.41
288 289 9.487790 AAAAGAGAAGAAGAAGAGATACAACAG 57.512 33.333 0.00 0.00 0.00 3.16
289 290 9.838339 AAAAAGAGAAGAAGAAGAGATACAACA 57.162 29.630 0.00 0.00 0.00 3.33
313 314 7.333528 AGTCAGATACAAAGTTCTGCAAAAA 57.666 32.000 0.00 0.00 39.36 1.94
314 315 6.942532 AGTCAGATACAAAGTTCTGCAAAA 57.057 33.333 0.00 0.00 39.36 2.44
315 316 6.942532 AAGTCAGATACAAAGTTCTGCAAA 57.057 33.333 0.00 0.00 39.36 3.68
316 317 9.151471 GTATAAGTCAGATACAAAGTTCTGCAA 57.849 33.333 0.00 0.00 39.36 4.08
317 318 8.531982 AGTATAAGTCAGATACAAAGTTCTGCA 58.468 33.333 0.00 0.00 39.36 4.41
318 319 8.934507 AGTATAAGTCAGATACAAAGTTCTGC 57.065 34.615 0.00 0.00 39.36 4.26
321 322 9.747293 GGGTAGTATAAGTCAGATACAAAGTTC 57.253 37.037 0.00 0.00 33.05 3.01
322 323 9.490083 AGGGTAGTATAAGTCAGATACAAAGTT 57.510 33.333 0.00 0.00 33.05 2.66
323 324 9.490083 AAGGGTAGTATAAGTCAGATACAAAGT 57.510 33.333 0.00 0.00 33.05 2.66
326 327 9.483489 TCAAAGGGTAGTATAAGTCAGATACAA 57.517 33.333 0.00 0.00 33.05 2.41
327 328 9.132923 CTCAAAGGGTAGTATAAGTCAGATACA 57.867 37.037 0.00 0.00 33.05 2.29
328 329 8.083462 GCTCAAAGGGTAGTATAAGTCAGATAC 58.917 40.741 0.00 0.00 0.00 2.24
329 330 8.005388 AGCTCAAAGGGTAGTATAAGTCAGATA 58.995 37.037 0.00 0.00 0.00 1.98
330 331 6.841755 AGCTCAAAGGGTAGTATAAGTCAGAT 59.158 38.462 0.00 0.00 0.00 2.90
331 332 6.096987 CAGCTCAAAGGGTAGTATAAGTCAGA 59.903 42.308 0.00 0.00 0.00 3.27
332 333 6.096987 TCAGCTCAAAGGGTAGTATAAGTCAG 59.903 42.308 0.00 0.00 0.00 3.51
333 334 5.955959 TCAGCTCAAAGGGTAGTATAAGTCA 59.044 40.000 0.00 0.00 0.00 3.41
334 335 6.466885 TCAGCTCAAAGGGTAGTATAAGTC 57.533 41.667 0.00 0.00 0.00 3.01
335 336 6.869206 TTCAGCTCAAAGGGTAGTATAAGT 57.131 37.500 0.00 0.00 0.00 2.24
336 337 6.708054 CCATTCAGCTCAAAGGGTAGTATAAG 59.292 42.308 1.69 0.00 0.00 1.73
337 338 6.385759 TCCATTCAGCTCAAAGGGTAGTATAA 59.614 38.462 8.47 0.00 0.00 0.98
338 339 5.903010 TCCATTCAGCTCAAAGGGTAGTATA 59.097 40.000 8.47 0.00 0.00 1.47
339 340 4.721776 TCCATTCAGCTCAAAGGGTAGTAT 59.278 41.667 8.47 0.00 0.00 2.12
340 341 4.101114 TCCATTCAGCTCAAAGGGTAGTA 58.899 43.478 8.47 0.00 0.00 1.82
341 342 2.912956 TCCATTCAGCTCAAAGGGTAGT 59.087 45.455 8.47 0.00 0.00 2.73
342 343 3.634397 TCCATTCAGCTCAAAGGGTAG 57.366 47.619 8.47 0.00 0.00 3.18
343 344 4.591321 ATTCCATTCAGCTCAAAGGGTA 57.409 40.909 8.47 1.02 0.00 3.69
344 345 2.978156 TTCCATTCAGCTCAAAGGGT 57.022 45.000 8.47 0.00 0.00 4.34
345 346 6.278363 CAAATATTCCATTCAGCTCAAAGGG 58.722 40.000 0.00 0.00 0.00 3.95
346 347 6.278363 CCAAATATTCCATTCAGCTCAAAGG 58.722 40.000 0.00 0.00 0.00 3.11
347 348 5.751990 GCCAAATATTCCATTCAGCTCAAAG 59.248 40.000 0.00 0.00 0.00 2.77
348 349 5.187381 TGCCAAATATTCCATTCAGCTCAAA 59.813 36.000 0.00 0.00 0.00 2.69
349 350 4.710865 TGCCAAATATTCCATTCAGCTCAA 59.289 37.500 0.00 0.00 0.00 3.02
350 351 4.098349 GTGCCAAATATTCCATTCAGCTCA 59.902 41.667 0.00 0.00 0.00 4.26
351 352 4.500375 GGTGCCAAATATTCCATTCAGCTC 60.500 45.833 0.00 0.00 0.00 4.09
352 353 3.385755 GGTGCCAAATATTCCATTCAGCT 59.614 43.478 0.00 0.00 0.00 4.24
353 354 3.385755 AGGTGCCAAATATTCCATTCAGC 59.614 43.478 0.00 0.00 0.00 4.26
354 355 5.353938 CAAGGTGCCAAATATTCCATTCAG 58.646 41.667 0.00 0.00 0.00 3.02
355 356 4.161942 CCAAGGTGCCAAATATTCCATTCA 59.838 41.667 0.00 0.00 0.00 2.57
356 357 4.162131 ACCAAGGTGCCAAATATTCCATTC 59.838 41.667 0.00 0.00 0.00 2.67
357 358 4.080975 CACCAAGGTGCCAAATATTCCATT 60.081 41.667 6.27 0.00 39.39 3.16
358 359 3.451902 CACCAAGGTGCCAAATATTCCAT 59.548 43.478 6.27 0.00 39.39 3.41
359 360 2.830923 CACCAAGGTGCCAAATATTCCA 59.169 45.455 6.27 0.00 39.39 3.53
360 361 3.525268 CACCAAGGTGCCAAATATTCC 57.475 47.619 6.27 0.00 39.39 3.01
372 373 2.694616 ATAAACCAAGGCACCAAGGT 57.305 45.000 0.00 0.00 35.47 3.50
373 374 2.896685 TGAATAAACCAAGGCACCAAGG 59.103 45.455 0.00 0.00 0.00 3.61
374 375 4.599047 TTGAATAAACCAAGGCACCAAG 57.401 40.909 0.00 0.00 0.00 3.61
375 376 5.359194 TTTTGAATAAACCAAGGCACCAA 57.641 34.783 0.00 0.00 0.00 3.67
376 377 5.359194 TTTTTGAATAAACCAAGGCACCA 57.641 34.783 0.00 0.00 0.00 4.17
408 409 8.946085 ACACGTTATTGATTAATGAACATCAGT 58.054 29.630 0.00 0.00 31.04 3.41
409 410 9.425893 GACACGTTATTGATTAATGAACATCAG 57.574 33.333 0.00 0.00 31.04 2.90
422 423 8.322906 TGAGAGAATTTTGACACGTTATTGAT 57.677 30.769 0.00 0.00 0.00 2.57
461 462 3.194542 CACACTCACCCAAAAGGAAAACA 59.805 43.478 0.00 0.00 39.89 2.83
468 469 0.944386 CGTCCACACTCACCCAAAAG 59.056 55.000 0.00 0.00 0.00 2.27
469 470 0.464735 CCGTCCACACTCACCCAAAA 60.465 55.000 0.00 0.00 0.00 2.44
476 477 3.238497 CCCACCCGTCCACACTCA 61.238 66.667 0.00 0.00 0.00 3.41
749 750 6.320164 TGCAGTTTAGCTTCTTCAAAAAGGTA 59.680 34.615 0.00 0.00 36.06 3.08
851 852 2.664698 CGGCGCCTTTTAAGAACTGTTC 60.665 50.000 26.68 12.54 0.00 3.18
871 872 7.171848 ACAGACAGCTAGTAGTAGTATGATTCG 59.828 40.741 18.95 6.49 0.00 3.34
878 879 6.339730 GTCAGACAGACAGCTAGTAGTAGTA 58.660 44.000 6.47 0.00 46.77 1.82
879 880 5.180271 GTCAGACAGACAGCTAGTAGTAGT 58.820 45.833 6.47 0.00 46.77 2.73
880 881 5.728351 GTCAGACAGACAGCTAGTAGTAG 57.272 47.826 0.00 0.00 46.77 2.57
902 903 6.830114 AAAGTTTCAGTAAGAAGACTGTCG 57.170 37.500 1.52 0.00 45.88 4.35
1103 1105 1.334869 GAGTGGACCAAAGTTGCTGTG 59.665 52.381 0.00 0.00 0.00 3.66
1495 1497 1.139256 GAGTTGCTAGGACTTAGGGCC 59.861 57.143 0.00 0.00 0.00 5.80
1510 1512 0.606401 ATCAAGCACACCGGGAGTTG 60.606 55.000 6.32 2.02 0.00 3.16
1521 1526 2.161855 TCCACAATCCACATCAAGCAC 58.838 47.619 0.00 0.00 0.00 4.40
1549 1565 2.806288 ACATATTTGACTTGCGACGC 57.194 45.000 14.19 14.19 0.00 5.19
1734 1751 1.922570 CAACCTCGTACTTGATCGGG 58.077 55.000 0.00 0.00 0.00 5.14
1797 1814 2.696125 TTCATCCCCTGGGCCTCC 60.696 66.667 7.39 0.00 34.68 4.30
1884 1904 0.890683 GGTTCCCATGTTCTTGCTGG 59.109 55.000 0.00 0.00 0.00 4.85
2086 2106 1.374252 CCAACGTCGACTCCTTGGG 60.374 63.158 20.72 8.99 31.16 4.12
2094 2114 3.343421 GGTGGCACCAACGTCGAC 61.343 66.667 31.26 5.18 38.42 4.20
2246 2266 3.198409 AGTTCATGAACAGCTGTCACA 57.802 42.857 33.92 22.31 43.47 3.58
2301 2325 3.146066 CTGCTACTACTCCTAGCCTGAG 58.854 54.545 0.00 0.00 36.54 3.35
2520 2544 2.485814 CAGCTTCACTTTAGGAACTGGC 59.514 50.000 0.00 0.00 41.52 4.85
2723 2747 7.182817 TCCCTCCTATCCATAATAATTGTCG 57.817 40.000 0.00 0.00 0.00 4.35
2888 2912 4.960469 AGAATGGCATGGTGAGAATTTGAT 59.040 37.500 0.00 0.00 0.00 2.57
2889 2913 4.346730 AGAATGGCATGGTGAGAATTTGA 58.653 39.130 0.00 0.00 0.00 2.69
2890 2914 4.730949 AGAATGGCATGGTGAGAATTTG 57.269 40.909 0.00 0.00 0.00 2.32
2891 2915 5.750352 AAAGAATGGCATGGTGAGAATTT 57.250 34.783 0.00 0.00 0.00 1.82
2948 2977 6.444633 TCTAGCTAGGTCAAATTATACACGC 58.555 40.000 20.58 0.00 0.00 5.34
3069 3098 0.110823 GGATCGTGTTTCGTGTGTGC 60.111 55.000 0.00 0.00 40.80 4.57
3249 3281 2.115427 TGTTTCTGGTGGAGTGTGAGA 58.885 47.619 0.00 0.00 0.00 3.27
3290 3322 0.589479 CATGTGTGTGTGTGTGTGCG 60.589 55.000 0.00 0.00 0.00 5.34
3291 3323 0.451383 ACATGTGTGTGTGTGTGTGC 59.549 50.000 0.00 0.00 37.14 4.57
3292 3324 1.267483 CGACATGTGTGTGTGTGTGTG 60.267 52.381 1.15 0.00 39.09 3.82
3293 3325 1.006086 CGACATGTGTGTGTGTGTGT 58.994 50.000 1.15 0.00 39.09 3.72
3294 3326 0.316114 GCGACATGTGTGTGTGTGTG 60.316 55.000 1.15 0.00 39.09 3.82
3295 3327 1.436195 GGCGACATGTGTGTGTGTGT 61.436 55.000 1.15 0.00 39.09 3.72
3296 3328 1.279539 GGCGACATGTGTGTGTGTG 59.720 57.895 1.15 0.00 39.09 3.82
3297 3329 1.153269 TGGCGACATGTGTGTGTGT 60.153 52.632 1.15 0.00 39.09 3.72
3347 3379 4.250116 CTAATCAGCATAGCTCGGACTT 57.750 45.455 0.00 0.00 36.40 3.01
3447 3479 4.404394 AGAATGGATTTTGCAGCATCATCA 59.596 37.500 13.79 3.44 0.00 3.07
3448 3480 4.945246 AGAATGGATTTTGCAGCATCATC 58.055 39.130 0.00 0.49 0.00 2.92
3449 3481 5.353394 AAGAATGGATTTTGCAGCATCAT 57.647 34.783 0.00 0.00 0.00 2.45
3562 3602 4.933064 CTCGCCTCCGCACGATCC 62.933 72.222 0.00 0.00 37.72 3.36
3846 3903 8.648693 AGAACGAATTATAACCTAGGCAATACT 58.351 33.333 9.30 0.00 0.00 2.12
4009 4070 4.909696 ACAGATCTTGAGACATACGGAG 57.090 45.455 0.00 0.00 0.00 4.63
4010 4071 6.377429 ACTTAACAGATCTTGAGACATACGGA 59.623 38.462 0.00 0.00 0.00 4.69
4011 4072 6.473778 CACTTAACAGATCTTGAGACATACGG 59.526 42.308 0.00 0.00 0.00 4.02
4012 4073 7.251281 TCACTTAACAGATCTTGAGACATACG 58.749 38.462 0.00 0.00 0.00 3.06
4013 4074 9.029243 CATCACTTAACAGATCTTGAGACATAC 57.971 37.037 0.00 0.00 0.00 2.39
4014 4075 8.753133 ACATCACTTAACAGATCTTGAGACATA 58.247 33.333 0.00 0.00 0.00 2.29
4015 4076 7.619050 ACATCACTTAACAGATCTTGAGACAT 58.381 34.615 0.00 0.00 0.00 3.06
4057 4126 1.325640 CTGACTTGCCGATCATCAACG 59.674 52.381 0.00 0.00 0.00 4.10
4058 4127 2.621338 TCTGACTTGCCGATCATCAAC 58.379 47.619 0.00 0.00 0.00 3.18
4107 4176 1.164662 TATCTCGTCTTCTCCGCCGG 61.165 60.000 0.00 0.00 0.00 6.13
4114 4183 2.826128 TGCACAACCTATCTCGTCTTCT 59.174 45.455 0.00 0.00 0.00 2.85
4144 4213 6.071840 ACAGTCTCTGTAAATGGAGTACACTC 60.072 42.308 0.49 0.49 43.46 3.51
4170 4239 3.047718 GCGCGCCCTCCTTTTAACC 62.048 63.158 23.24 0.00 0.00 2.85
4171 4240 1.583495 AAGCGCGCCCTCCTTTTAAC 61.583 55.000 30.33 0.00 0.00 2.01
4174 4243 3.365265 CAAGCGCGCCCTCCTTTT 61.365 61.111 30.33 11.02 0.00 2.27
4273 5011 2.273557 ACGGTCGAACCCATTATTTCG 58.726 47.619 0.00 0.00 44.79 3.46
4277 5015 2.762327 ACACTACGGTCGAACCCATTAT 59.238 45.455 0.00 0.00 33.75 1.28
4293 5031 3.478780 GGACTGCCCCACACACTA 58.521 61.111 0.00 0.00 0.00 2.74
4317 5058 1.079057 GTCCTCCCTTTCAGTCGGC 60.079 63.158 0.00 0.00 0.00 5.54
4318 5059 0.037232 GTGTCCTCCCTTTCAGTCGG 60.037 60.000 0.00 0.00 0.00 4.79
4319 5060 0.388649 CGTGTCCTCCCTTTCAGTCG 60.389 60.000 0.00 0.00 0.00 4.18
4320 5061 0.037232 CCGTGTCCTCCCTTTCAGTC 60.037 60.000 0.00 0.00 0.00 3.51
4368 5109 1.227380 CATCCTAGGGCTCGTGTGC 60.227 63.158 9.46 0.00 0.00 4.57
4369 5110 1.443407 CCATCCTAGGGCTCGTGTG 59.557 63.158 9.46 0.00 0.00 3.82
4370 5111 1.762460 CCCATCCTAGGGCTCGTGT 60.762 63.158 9.46 0.00 43.10 4.49
4388 5129 4.023173 GCGTTGCGGGTCCTATAC 57.977 61.111 0.00 0.00 0.00 1.47
4493 5234 0.600255 GCGCACCGGTTCTATATGCT 60.600 55.000 2.97 0.00 34.06 3.79
4500 5241 4.595538 TTGACGCGCACCGGTTCT 62.596 61.111 2.97 0.00 42.52 3.01
4502 5243 3.944233 GTTTGACGCGCACCGGTT 61.944 61.111 2.97 0.00 42.52 4.44
4565 5306 3.844090 GCCAGCCTCGTCTCCCTC 61.844 72.222 0.00 0.00 0.00 4.30
4566 5307 4.704103 TGCCAGCCTCGTCTCCCT 62.704 66.667 0.00 0.00 0.00 4.20
4581 5322 1.103803 GGCCCCTAGTAAAGCTTTGC 58.896 55.000 22.02 20.16 0.00 3.68
4757 5498 0.316196 GCACACACGCTGTTTCAGTC 60.316 55.000 0.00 0.00 33.43 3.51
4761 5502 2.052237 CCGCACACACGCTGTTTC 60.052 61.111 0.00 0.00 0.00 2.78
4762 5503 4.250431 GCCGCACACACGCTGTTT 62.250 61.111 0.00 0.00 0.00 2.83
4804 5913 3.914966 CACAAGAGTTGCTCTACACGTAG 59.085 47.826 0.00 0.00 40.28 3.51
4825 5934 5.349690 TCTGGCCCATAATATGATACTCCA 58.650 41.667 0.00 1.35 0.00 3.86
4836 5945 4.431416 TTACAACGATCTGGCCCATAAT 57.569 40.909 0.00 0.00 0.00 1.28
4837 5946 3.916359 TTACAACGATCTGGCCCATAA 57.084 42.857 0.00 0.00 0.00 1.90
4916 6026 0.036105 ACATGGCGATTGAGTGCAGA 60.036 50.000 0.00 0.00 0.00 4.26
4918 6028 1.246649 AAACATGGCGATTGAGTGCA 58.753 45.000 0.00 0.00 0.00 4.57
4943 6054 2.099062 GCTCGATTTGGTGCAGCG 59.901 61.111 11.91 0.00 0.00 5.18
4977 6088 2.484742 ATCGTCTTACCCAAACCCAC 57.515 50.000 0.00 0.00 0.00 4.61
4982 6094 5.221382 GGAGTGCTATATCGTCTTACCCAAA 60.221 44.000 0.00 0.00 0.00 3.28
4989 6101 5.854010 TGAAAGGAGTGCTATATCGTCTT 57.146 39.130 0.00 0.00 0.00 3.01
5007 6119 6.142818 ACGTTCCTCAACAAATTGATGAAA 57.857 33.333 7.34 0.00 45.35 2.69
5017 6129 1.804151 GCATGCTACGTTCCTCAACAA 59.196 47.619 11.37 0.00 32.14 2.83
5018 6130 1.270571 TGCATGCTACGTTCCTCAACA 60.271 47.619 20.33 0.00 32.14 3.33
5019 6131 1.438651 TGCATGCTACGTTCCTCAAC 58.561 50.000 20.33 0.00 0.00 3.18
5020 6132 2.177394 TTGCATGCTACGTTCCTCAA 57.823 45.000 20.33 0.00 0.00 3.02
5021 6133 2.401583 ATTGCATGCTACGTTCCTCA 57.598 45.000 20.33 0.00 0.00 3.86
5022 6134 3.764885 AAATTGCATGCTACGTTCCTC 57.235 42.857 20.33 0.00 0.00 3.71
5023 6135 5.637006 TTAAAATTGCATGCTACGTTCCT 57.363 34.783 20.33 0.00 0.00 3.36
5024 6136 6.698359 TTTTAAAATTGCATGCTACGTTCC 57.302 33.333 20.33 0.00 0.00 3.62
5046 6158 6.236017 TCTTGCGTGATCGTAGAAATTTTT 57.764 33.333 0.00 0.00 43.58 1.94
5047 6159 5.856126 TCTTGCGTGATCGTAGAAATTTT 57.144 34.783 0.00 0.00 43.58 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.