Multiple sequence alignment - TraesCS6D01G232400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G232400 chr6D 100.000 3269 0 0 1 3269 325822489 325819221 0.000000e+00 6037.0
1 TraesCS6D01G232400 chr6D 88.194 432 50 1 1232 1663 10810276 10809846 6.250000e-142 514.0
2 TraesCS6D01G232400 chr6B 95.571 2032 63 12 739 2763 496986239 496988250 0.000000e+00 3229.0
3 TraesCS6D01G232400 chr6B 94.118 459 16 6 2744 3192 496988418 496988875 0.000000e+00 688.0
4 TraesCS6D01G232400 chr6B 92.889 225 10 3 522 741 496985225 496985448 4.070000e-84 322.0
5 TraesCS6D01G232400 chr6A 94.786 1611 48 12 738 2328 464691286 464689692 0.000000e+00 2477.0
6 TraesCS6D01G232400 chr6A 92.752 883 21 11 2425 3269 464689651 464688774 0.000000e+00 1236.0
7 TraesCS6D01G232400 chr6A 86.610 351 44 1 1313 1663 12367546 12367199 5.120000e-103 385.0
8 TraesCS6D01G232400 chr6A 90.667 75 6 1 182 255 577834362 577834288 7.460000e-17 99.0
9 TraesCS6D01G232400 chr2D 86.941 850 109 2 1241 2089 526526865 526526017 0.000000e+00 953.0
10 TraesCS6D01G232400 chr2D 86.076 79 11 0 2771 2849 526516562 526516484 5.810000e-13 86.1
11 TraesCS6D01G232400 chr2A 86.941 850 109 2 1241 2089 671712475 671711627 0.000000e+00 953.0
12 TraesCS6D01G232400 chr2A 88.525 610 61 3 1234 1835 535218087 535217479 0.000000e+00 730.0
13 TraesCS6D01G232400 chr2A 82.075 106 17 2 2771 2875 671704443 671704339 4.490000e-14 89.8
14 TraesCS6D01G232400 chr2B 86.706 850 111 2 1241 2089 622922682 622921834 0.000000e+00 942.0
15 TraesCS6D01G232400 chr2B 85.106 470 62 4 1518 1987 572269045 572268584 1.060000e-129 473.0
16 TraesCS6D01G232400 chr2B 83.871 93 15 0 2771 2863 622914438 622914346 4.490000e-14 89.8
17 TraesCS6D01G232400 chr3A 86.928 612 55 9 1233 1835 648104212 648104807 0.000000e+00 664.0
18 TraesCS6D01G232400 chr3A 87.273 55 7 0 529 583 634578397 634578451 2.720000e-06 63.9
19 TraesCS6D01G232400 chr5B 87.981 416 39 4 1252 1656 690230581 690230996 6.340000e-132 481.0
20 TraesCS6D01G232400 chr5B 86.337 344 41 1 1505 1842 579515052 579515395 1.430000e-98 370.0
21 TraesCS6D01G232400 chr5B 85.246 61 6 3 528 587 545123952 545123894 3.520000e-05 60.2
22 TraesCS6D01G232400 chr1B 86.224 392 47 4 1518 1908 625757440 625757055 5.040000e-113 418.0
23 TraesCS6D01G232400 chr1B 78.151 119 19 7 525 640 216104494 216104608 5.850000e-08 69.4
24 TraesCS6D01G232400 chr7D 80.597 201 36 2 7 206 293634156 293633958 5.650000e-33 152.0
25 TraesCS6D01G232400 chr7D 76.786 224 41 7 76 296 634601198 634600983 7.410000e-22 115.0
26 TraesCS6D01G232400 chr4A 78.070 228 39 9 76 296 52064859 52064636 2.050000e-27 134.0
27 TraesCS6D01G232400 chr5A 79.104 201 35 6 100 296 14417884 14418081 7.360000e-27 132.0
28 TraesCS6D01G232400 chr3B 91.071 56 5 0 76 131 828246425 828246480 3.500000e-10 76.8
29 TraesCS6D01G232400 chr5D 89.091 55 4 2 528 581 545282134 545282187 2.110000e-07 67.6
30 TraesCS6D01G232400 chr1D 89.091 55 5 1 529 583 471139770 471139823 2.110000e-07 67.6
31 TraesCS6D01G232400 chr7A 86.885 61 5 3 528 587 573821084 573821142 7.570000e-07 65.8
32 TraesCS6D01G232400 chr7B 85.246 61 6 3 528 587 616569673 616569615 3.520000e-05 60.2
33 TraesCS6D01G232400 chr4D 85.246 61 6 3 528 587 335890567 335890509 3.520000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G232400 chr6D 325819221 325822489 3268 True 6037.0 6037 100.000000 1 3269 1 chr6D.!!$R2 3268
1 TraesCS6D01G232400 chr6B 496985225 496988875 3650 False 1413.0 3229 94.192667 522 3192 3 chr6B.!!$F1 2670
2 TraesCS6D01G232400 chr6A 464688774 464691286 2512 True 1856.5 2477 93.769000 738 3269 2 chr6A.!!$R3 2531
3 TraesCS6D01G232400 chr2D 526526017 526526865 848 True 953.0 953 86.941000 1241 2089 1 chr2D.!!$R2 848
4 TraesCS6D01G232400 chr2A 671711627 671712475 848 True 953.0 953 86.941000 1241 2089 1 chr2A.!!$R3 848
5 TraesCS6D01G232400 chr2A 535217479 535218087 608 True 730.0 730 88.525000 1234 1835 1 chr2A.!!$R1 601
6 TraesCS6D01G232400 chr2B 622921834 622922682 848 True 942.0 942 86.706000 1241 2089 1 chr2B.!!$R3 848
7 TraesCS6D01G232400 chr3A 648104212 648104807 595 False 664.0 664 86.928000 1233 1835 1 chr3A.!!$F2 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
144 145 0.034767 AGACCCCGTCGTGACATCTA 60.035 55.0 0.41 0.0 37.67 1.98 F
1026 1832 0.036388 CCTTCCGTCTAGGCAAGCAA 60.036 55.0 0.00 0.0 40.77 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1763 2578 1.411246 TCGGCGTTGATGTTATAGGCT 59.589 47.619 6.85 0.0 0.0 4.58 R
2886 3929 0.034896 TCTTCCACCCTCAAAGCGAC 59.965 55.000 0.00 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.725556 GAAACTATTGCACGTGAAGACA 57.274 40.909 22.23 4.34 0.00 3.41
22 23 5.090652 GAAACTATTGCACGTGAAGACAA 57.909 39.130 22.23 14.19 0.00 3.18
23 24 4.468095 AACTATTGCACGTGAAGACAAC 57.532 40.909 22.23 0.00 0.00 3.32
24 25 3.462982 ACTATTGCACGTGAAGACAACA 58.537 40.909 22.23 2.21 0.00 3.33
25 26 3.874543 ACTATTGCACGTGAAGACAACAA 59.125 39.130 22.23 12.26 0.00 2.83
26 27 2.535934 TTGCACGTGAAGACAACAAC 57.464 45.000 22.23 0.00 0.00 3.32
27 28 1.443802 TGCACGTGAAGACAACAACA 58.556 45.000 22.23 0.00 0.00 3.33
28 29 1.807142 TGCACGTGAAGACAACAACAA 59.193 42.857 22.23 0.00 0.00 2.83
29 30 2.226674 TGCACGTGAAGACAACAACAAA 59.773 40.909 22.23 0.00 0.00 2.83
30 31 3.238441 GCACGTGAAGACAACAACAAAA 58.762 40.909 22.23 0.00 0.00 2.44
31 32 3.670991 GCACGTGAAGACAACAACAAAAA 59.329 39.130 22.23 0.00 0.00 1.94
58 59 1.908483 AGGATCGTCCTTTCAGGCC 59.092 57.895 0.00 0.00 46.91 5.19
59 60 1.153147 GGATCGTCCTTTCAGGCCC 60.153 63.158 0.00 0.00 34.61 5.80
60 61 1.602237 GATCGTCCTTTCAGGCCCA 59.398 57.895 0.00 0.00 34.61 5.36
61 62 0.035439 GATCGTCCTTTCAGGCCCAA 60.035 55.000 0.00 0.00 34.61 4.12
62 63 0.322546 ATCGTCCTTTCAGGCCCAAC 60.323 55.000 0.00 0.00 34.61 3.77
63 64 1.228124 CGTCCTTTCAGGCCCAACA 60.228 57.895 0.00 0.00 34.61 3.33
64 65 0.821711 CGTCCTTTCAGGCCCAACAA 60.822 55.000 0.00 0.00 34.61 2.83
65 66 1.408969 GTCCTTTCAGGCCCAACAAA 58.591 50.000 0.00 0.00 34.61 2.83
66 67 1.970640 GTCCTTTCAGGCCCAACAAAT 59.029 47.619 0.00 0.00 34.61 2.32
67 68 3.161866 GTCCTTTCAGGCCCAACAAATA 58.838 45.455 0.00 0.00 34.61 1.40
68 69 3.056821 GTCCTTTCAGGCCCAACAAATAC 60.057 47.826 0.00 0.00 34.61 1.89
69 70 2.233676 CCTTTCAGGCCCAACAAATACC 59.766 50.000 0.00 0.00 0.00 2.73
70 71 2.990740 TTCAGGCCCAACAAATACCT 57.009 45.000 0.00 0.00 0.00 3.08
71 72 2.507407 TCAGGCCCAACAAATACCTC 57.493 50.000 0.00 0.00 0.00 3.85
72 73 1.992557 TCAGGCCCAACAAATACCTCT 59.007 47.619 0.00 0.00 0.00 3.69
73 74 2.378547 TCAGGCCCAACAAATACCTCTT 59.621 45.455 0.00 0.00 0.00 2.85
74 75 2.755103 CAGGCCCAACAAATACCTCTTC 59.245 50.000 0.00 0.00 0.00 2.87
75 76 2.378547 AGGCCCAACAAATACCTCTTCA 59.621 45.455 0.00 0.00 0.00 3.02
76 77 3.161866 GGCCCAACAAATACCTCTTCAA 58.838 45.455 0.00 0.00 0.00 2.69
77 78 3.193479 GGCCCAACAAATACCTCTTCAAG 59.807 47.826 0.00 0.00 0.00 3.02
78 79 3.826729 GCCCAACAAATACCTCTTCAAGT 59.173 43.478 0.00 0.00 0.00 3.16
79 80 5.007682 GCCCAACAAATACCTCTTCAAGTA 58.992 41.667 0.00 0.00 0.00 2.24
80 81 5.106277 GCCCAACAAATACCTCTTCAAGTAC 60.106 44.000 0.00 0.00 0.00 2.73
81 82 6.001460 CCCAACAAATACCTCTTCAAGTACA 58.999 40.000 0.00 0.00 0.00 2.90
82 83 6.659242 CCCAACAAATACCTCTTCAAGTACAT 59.341 38.462 0.00 0.00 0.00 2.29
83 84 7.176690 CCCAACAAATACCTCTTCAAGTACATT 59.823 37.037 0.00 0.00 0.00 2.71
84 85 9.226606 CCAACAAATACCTCTTCAAGTACATTA 57.773 33.333 0.00 0.00 0.00 1.90
93 94 9.847224 ACCTCTTCAAGTACATTAAGAAAGAAA 57.153 29.630 0.00 0.00 0.00 2.52
96 97 9.621629 TCTTCAAGTACATTAAGAAAGAAACCA 57.378 29.630 0.00 0.00 0.00 3.67
97 98 9.665264 CTTCAAGTACATTAAGAAAGAAACCAC 57.335 33.333 0.00 0.00 0.00 4.16
98 99 8.740123 TCAAGTACATTAAGAAAGAAACCACA 57.260 30.769 0.00 0.00 0.00 4.17
99 100 8.617809 TCAAGTACATTAAGAAAGAAACCACAC 58.382 33.333 0.00 0.00 0.00 3.82
100 101 8.402472 CAAGTACATTAAGAAAGAAACCACACA 58.598 33.333 0.00 0.00 0.00 3.72
101 102 8.691661 AGTACATTAAGAAAGAAACCACACAT 57.308 30.769 0.00 0.00 0.00 3.21
102 103 8.567948 AGTACATTAAGAAAGAAACCACACATG 58.432 33.333 0.00 0.00 0.00 3.21
103 104 7.346751 ACATTAAGAAAGAAACCACACATGT 57.653 32.000 0.00 0.00 0.00 3.21
104 105 7.425606 ACATTAAGAAAGAAACCACACATGTC 58.574 34.615 0.00 0.00 0.00 3.06
105 106 4.918810 AAGAAAGAAACCACACATGTCC 57.081 40.909 0.00 0.00 0.00 4.02
106 107 3.897239 AGAAAGAAACCACACATGTCCA 58.103 40.909 0.00 0.00 0.00 4.02
107 108 3.885297 AGAAAGAAACCACACATGTCCAG 59.115 43.478 0.00 0.00 0.00 3.86
108 109 3.576078 AAGAAACCACACATGTCCAGA 57.424 42.857 0.00 0.00 0.00 3.86
109 110 3.795688 AGAAACCACACATGTCCAGAT 57.204 42.857 0.00 0.00 0.00 2.90
110 111 4.908601 AGAAACCACACATGTCCAGATA 57.091 40.909 0.00 0.00 0.00 1.98
111 112 4.836825 AGAAACCACACATGTCCAGATAG 58.163 43.478 0.00 0.00 0.00 2.08
112 113 4.287067 AGAAACCACACATGTCCAGATAGT 59.713 41.667 0.00 0.00 0.00 2.12
113 114 4.640771 AACCACACATGTCCAGATAGTT 57.359 40.909 0.00 0.00 0.00 2.24
114 115 4.207891 ACCACACATGTCCAGATAGTTC 57.792 45.455 0.00 0.00 0.00 3.01
115 116 3.840666 ACCACACATGTCCAGATAGTTCT 59.159 43.478 0.00 0.00 0.00 3.01
116 117 4.081420 ACCACACATGTCCAGATAGTTCTC 60.081 45.833 0.00 0.00 0.00 2.87
117 118 4.081476 CCACACATGTCCAGATAGTTCTCA 60.081 45.833 0.00 0.00 0.00 3.27
118 119 5.482006 CACACATGTCCAGATAGTTCTCAA 58.518 41.667 0.00 0.00 0.00 3.02
119 120 5.349817 CACACATGTCCAGATAGTTCTCAAC 59.650 44.000 0.00 0.00 0.00 3.18
120 121 4.564372 CACATGTCCAGATAGTTCTCAACG 59.436 45.833 0.00 0.00 36.23 4.10
121 122 4.462834 ACATGTCCAGATAGTTCTCAACGA 59.537 41.667 0.00 0.00 36.23 3.85
122 123 5.047306 ACATGTCCAGATAGTTCTCAACGAA 60.047 40.000 0.00 0.00 36.23 3.85
123 124 5.060662 TGTCCAGATAGTTCTCAACGAAG 57.939 43.478 0.00 0.00 36.23 3.79
124 125 4.765339 TGTCCAGATAGTTCTCAACGAAGA 59.235 41.667 0.00 0.00 36.23 2.87
125 126 5.243060 TGTCCAGATAGTTCTCAACGAAGAA 59.757 40.000 0.00 0.00 36.23 2.52
126 127 5.802956 GTCCAGATAGTTCTCAACGAAGAAG 59.197 44.000 0.00 0.00 35.99 2.85
127 128 5.710567 TCCAGATAGTTCTCAACGAAGAAGA 59.289 40.000 0.00 0.00 35.99 2.87
128 129 5.802956 CCAGATAGTTCTCAACGAAGAAGAC 59.197 44.000 0.00 0.00 35.99 3.01
129 130 5.802956 CAGATAGTTCTCAACGAAGAAGACC 59.197 44.000 0.00 0.00 35.99 3.85
130 131 3.388345 AGTTCTCAACGAAGAAGACCC 57.612 47.619 0.00 0.00 35.99 4.46
131 132 2.037381 AGTTCTCAACGAAGAAGACCCC 59.963 50.000 0.00 0.00 35.99 4.95
132 133 0.601558 TCTCAACGAAGAAGACCCCG 59.398 55.000 0.00 0.00 0.00 5.73
133 134 0.317479 CTCAACGAAGAAGACCCCGT 59.683 55.000 0.00 0.00 36.77 5.28
134 135 0.316204 TCAACGAAGAAGACCCCGTC 59.684 55.000 0.00 0.00 33.84 4.79
135 136 1.007336 CAACGAAGAAGACCCCGTCG 61.007 60.000 0.00 0.00 40.39 5.12
136 137 1.900498 ACGAAGAAGACCCCGTCGT 60.900 57.895 0.00 0.00 42.15 4.34
137 138 1.443872 CGAAGAAGACCCCGTCGTG 60.444 63.158 0.00 0.00 37.67 4.35
138 139 1.859427 CGAAGAAGACCCCGTCGTGA 61.859 60.000 0.00 0.00 37.67 4.35
139 140 0.388263 GAAGAAGACCCCGTCGTGAC 60.388 60.000 0.00 0.00 37.67 3.67
140 141 1.111116 AAGAAGACCCCGTCGTGACA 61.111 55.000 0.41 0.00 37.67 3.58
141 142 0.898789 AGAAGACCCCGTCGTGACAT 60.899 55.000 0.41 0.00 37.67 3.06
142 143 0.458025 GAAGACCCCGTCGTGACATC 60.458 60.000 0.41 0.00 37.67 3.06
143 144 0.898789 AAGACCCCGTCGTGACATCT 60.899 55.000 0.41 0.00 37.67 2.90
144 145 0.034767 AGACCCCGTCGTGACATCTA 60.035 55.000 0.41 0.00 37.67 1.98
145 146 0.100146 GACCCCGTCGTGACATCTAC 59.900 60.000 0.41 0.00 0.00 2.59
146 147 0.609957 ACCCCGTCGTGACATCTACA 60.610 55.000 0.41 0.00 0.00 2.74
147 148 0.528924 CCCCGTCGTGACATCTACAA 59.471 55.000 0.41 0.00 0.00 2.41
148 149 1.067425 CCCCGTCGTGACATCTACAAA 60.067 52.381 0.41 0.00 0.00 2.83
149 150 2.418197 CCCCGTCGTGACATCTACAAAT 60.418 50.000 0.41 0.00 0.00 2.32
150 151 3.181484 CCCCGTCGTGACATCTACAAATA 60.181 47.826 0.41 0.00 0.00 1.40
151 152 4.426416 CCCGTCGTGACATCTACAAATAA 58.574 43.478 0.41 0.00 0.00 1.40
152 153 4.865925 CCCGTCGTGACATCTACAAATAAA 59.134 41.667 0.41 0.00 0.00 1.40
153 154 5.522460 CCCGTCGTGACATCTACAAATAAAT 59.478 40.000 0.41 0.00 0.00 1.40
154 155 6.036735 CCCGTCGTGACATCTACAAATAAATT 59.963 38.462 0.41 0.00 0.00 1.82
155 156 7.413657 CCCGTCGTGACATCTACAAATAAATTT 60.414 37.037 0.00 0.00 0.00 1.82
156 157 8.597227 CCGTCGTGACATCTACAAATAAATTTA 58.403 33.333 0.00 0.00 0.00 1.40
157 158 9.961266 CGTCGTGACATCTACAAATAAATTTAA 57.039 29.630 1.21 0.00 0.00 1.52
248 249 9.460019 TCAACTATCATATTGTTGATCCAAACA 57.540 29.630 11.22 0.00 45.36 2.83
254 255 9.976511 ATCATATTGTTGATCCAAACATTCATC 57.023 29.630 0.00 0.00 39.68 2.92
255 256 9.192642 TCATATTGTTGATCCAAACATTCATCT 57.807 29.630 0.00 0.00 39.68 2.90
256 257 9.811995 CATATTGTTGATCCAAACATTCATCTT 57.188 29.630 0.00 0.00 39.68 2.40
258 259 6.897706 TGTTGATCCAAACATTCATCTTCA 57.102 33.333 0.00 0.00 35.16 3.02
259 260 7.287512 TGTTGATCCAAACATTCATCTTCAA 57.712 32.000 0.00 0.00 35.16 2.69
260 261 7.898918 TGTTGATCCAAACATTCATCTTCAAT 58.101 30.769 0.00 0.00 35.16 2.57
261 262 9.022884 TGTTGATCCAAACATTCATCTTCAATA 57.977 29.630 0.00 0.00 35.16 1.90
262 263 9.512435 GTTGATCCAAACATTCATCTTCAATAG 57.488 33.333 0.00 0.00 0.00 1.73
263 264 9.465199 TTGATCCAAACATTCATCTTCAATAGA 57.535 29.630 0.00 0.00 37.28 1.98
264 265 9.465199 TGATCCAAACATTCATCTTCAATAGAA 57.535 29.630 0.00 0.00 36.22 2.10
265 266 9.727627 GATCCAAACATTCATCTTCAATAGAAC 57.272 33.333 0.00 0.00 36.22 3.01
266 267 8.634335 TCCAAACATTCATCTTCAATAGAACA 57.366 30.769 0.00 0.00 36.22 3.18
267 268 9.076781 TCCAAACATTCATCTTCAATAGAACAA 57.923 29.630 0.00 0.00 36.22 2.83
268 269 9.695526 CCAAACATTCATCTTCAATAGAACAAA 57.304 29.630 0.00 0.00 36.22 2.83
272 273 9.362539 ACATTCATCTTCAATAGAACAAAATGC 57.637 29.630 0.00 0.00 36.22 3.56
273 274 8.814235 CATTCATCTTCAATAGAACAAAATGCC 58.186 33.333 0.00 0.00 36.22 4.40
274 275 7.465353 TCATCTTCAATAGAACAAAATGCCA 57.535 32.000 0.00 0.00 36.22 4.92
275 276 8.070034 TCATCTTCAATAGAACAAAATGCCAT 57.930 30.769 0.00 0.00 36.22 4.40
276 277 8.192774 TCATCTTCAATAGAACAAAATGCCATC 58.807 33.333 0.00 0.00 36.22 3.51
277 278 6.866480 TCTTCAATAGAACAAAATGCCATCC 58.134 36.000 0.00 0.00 0.00 3.51
278 279 6.436847 TCTTCAATAGAACAAAATGCCATCCA 59.563 34.615 0.00 0.00 0.00 3.41
279 280 6.602410 TCAATAGAACAAAATGCCATCCAA 57.398 33.333 0.00 0.00 0.00 3.53
280 281 7.002250 TCAATAGAACAAAATGCCATCCAAA 57.998 32.000 0.00 0.00 0.00 3.28
281 282 7.622713 TCAATAGAACAAAATGCCATCCAAAT 58.377 30.769 0.00 0.00 0.00 2.32
282 283 7.549842 TCAATAGAACAAAATGCCATCCAAATG 59.450 33.333 0.00 0.00 0.00 2.32
283 284 5.231702 AGAACAAAATGCCATCCAAATGT 57.768 34.783 0.00 0.00 0.00 2.71
284 285 6.357579 AGAACAAAATGCCATCCAAATGTA 57.642 33.333 0.00 0.00 0.00 2.29
285 286 6.949715 AGAACAAAATGCCATCCAAATGTAT 58.050 32.000 0.00 0.00 0.00 2.29
286 287 7.396418 AGAACAAAATGCCATCCAAATGTATT 58.604 30.769 0.00 0.00 0.00 1.89
287 288 6.988622 ACAAAATGCCATCCAAATGTATTG 57.011 33.333 0.00 0.00 0.00 1.90
288 289 6.474630 ACAAAATGCCATCCAAATGTATTGT 58.525 32.000 0.00 0.00 0.00 2.71
289 290 7.619050 ACAAAATGCCATCCAAATGTATTGTA 58.381 30.769 0.00 0.00 0.00 2.41
290 291 8.099537 ACAAAATGCCATCCAAATGTATTGTAA 58.900 29.630 0.00 0.00 0.00 2.41
291 292 8.389603 CAAAATGCCATCCAAATGTATTGTAAC 58.610 33.333 0.00 0.00 0.00 2.50
292 293 5.590530 TGCCATCCAAATGTATTGTAACC 57.409 39.130 0.00 0.00 0.00 2.85
293 294 5.019470 TGCCATCCAAATGTATTGTAACCA 58.981 37.500 0.00 0.00 0.00 3.67
294 295 5.481824 TGCCATCCAAATGTATTGTAACCAA 59.518 36.000 0.00 0.00 34.45 3.67
295 296 6.155910 TGCCATCCAAATGTATTGTAACCAAT 59.844 34.615 0.00 0.00 43.62 3.16
296 297 7.047271 GCCATCCAAATGTATTGTAACCAATT 58.953 34.615 0.00 0.00 41.50 2.32
297 298 7.224557 GCCATCCAAATGTATTGTAACCAATTC 59.775 37.037 0.00 0.00 41.50 2.17
298 299 8.477256 CCATCCAAATGTATTGTAACCAATTCT 58.523 33.333 0.00 0.00 41.50 2.40
299 300 9.520204 CATCCAAATGTATTGTAACCAATTCTC 57.480 33.333 0.00 0.00 41.50 2.87
300 301 7.757526 TCCAAATGTATTGTAACCAATTCTCG 58.242 34.615 0.00 0.00 41.50 4.04
301 302 6.472163 CCAAATGTATTGTAACCAATTCTCGC 59.528 38.462 0.00 0.00 41.50 5.03
302 303 5.751243 ATGTATTGTAACCAATTCTCGCC 57.249 39.130 0.00 0.00 41.50 5.54
303 304 3.619483 TGTATTGTAACCAATTCTCGCCG 59.381 43.478 0.00 0.00 41.50 6.46
304 305 0.800012 TTGTAACCAATTCTCGCCGC 59.200 50.000 0.00 0.00 0.00 6.53
305 306 0.320858 TGTAACCAATTCTCGCCGCA 60.321 50.000 0.00 0.00 0.00 5.69
306 307 0.800012 GTAACCAATTCTCGCCGCAA 59.200 50.000 0.00 0.00 0.00 4.85
307 308 0.800012 TAACCAATTCTCGCCGCAAC 59.200 50.000 0.00 0.00 0.00 4.17
308 309 2.098298 CCAATTCTCGCCGCAACG 59.902 61.111 0.00 0.00 0.00 4.10
309 310 2.574212 CAATTCTCGCCGCAACGC 60.574 61.111 0.00 0.00 0.00 4.84
310 311 3.047280 AATTCTCGCCGCAACGCA 61.047 55.556 0.00 0.00 0.00 5.24
311 312 3.308878 AATTCTCGCCGCAACGCAC 62.309 57.895 0.00 0.00 0.00 5.34
319 320 3.122323 CGCAACGCACGGGGTATT 61.122 61.111 0.00 0.00 0.00 1.89
320 321 1.810441 CGCAACGCACGGGGTATTA 60.810 57.895 0.00 0.00 0.00 0.98
321 322 1.155424 CGCAACGCACGGGGTATTAT 61.155 55.000 0.00 0.00 0.00 1.28
322 323 0.584876 GCAACGCACGGGGTATTATC 59.415 55.000 0.00 0.00 0.00 1.75
323 324 1.808891 GCAACGCACGGGGTATTATCT 60.809 52.381 0.00 0.00 0.00 1.98
324 325 2.546373 GCAACGCACGGGGTATTATCTA 60.546 50.000 0.00 0.00 0.00 1.98
325 326 3.054878 CAACGCACGGGGTATTATCTAC 58.945 50.000 0.00 0.00 0.00 2.59
326 327 2.590821 ACGCACGGGGTATTATCTACT 58.409 47.619 0.00 0.00 0.00 2.57
327 328 2.961062 ACGCACGGGGTATTATCTACTT 59.039 45.455 0.00 0.00 0.00 2.24
328 329 3.005155 ACGCACGGGGTATTATCTACTTC 59.995 47.826 0.00 0.00 0.00 3.01
329 330 3.005050 CGCACGGGGTATTATCTACTTCA 59.995 47.826 0.00 0.00 0.00 3.02
330 331 4.500205 CGCACGGGGTATTATCTACTTCAA 60.500 45.833 0.00 0.00 0.00 2.69
331 332 5.362263 GCACGGGGTATTATCTACTTCAAA 58.638 41.667 0.00 0.00 0.00 2.69
332 333 5.465724 GCACGGGGTATTATCTACTTCAAAG 59.534 44.000 0.00 0.00 0.00 2.77
333 334 6.684613 GCACGGGGTATTATCTACTTCAAAGA 60.685 42.308 0.00 0.00 0.00 2.52
334 335 7.270047 CACGGGGTATTATCTACTTCAAAGAA 58.730 38.462 0.00 0.00 0.00 2.52
335 336 7.931948 CACGGGGTATTATCTACTTCAAAGAAT 59.068 37.037 0.00 0.00 0.00 2.40
336 337 8.491958 ACGGGGTATTATCTACTTCAAAGAATT 58.508 33.333 0.00 0.00 0.00 2.17
337 338 8.989980 CGGGGTATTATCTACTTCAAAGAATTC 58.010 37.037 0.00 0.00 0.00 2.17
338 339 9.847224 GGGGTATTATCTACTTCAAAGAATTCA 57.153 33.333 8.44 0.00 0.00 2.57
346 347 9.605275 ATCTACTTCAAAGAATTCATCGATTCA 57.395 29.630 8.44 0.00 38.27 2.57
347 348 9.605275 TCTACTTCAAAGAATTCATCGATTCAT 57.395 29.630 8.44 0.00 38.27 2.57
348 349 9.861138 CTACTTCAAAGAATTCATCGATTCATC 57.139 33.333 8.44 0.00 38.27 2.92
349 350 7.701445 ACTTCAAAGAATTCATCGATTCATCC 58.299 34.615 8.44 0.00 38.27 3.51
350 351 6.291067 TCAAAGAATTCATCGATTCATCCG 57.709 37.500 8.44 0.00 38.27 4.18
351 352 6.048509 TCAAAGAATTCATCGATTCATCCGA 58.951 36.000 8.44 0.00 38.27 4.55
352 353 6.707608 TCAAAGAATTCATCGATTCATCCGAT 59.292 34.615 8.44 0.00 46.32 4.18
353 354 7.227314 TCAAAGAATTCATCGATTCATCCGATT 59.773 33.333 8.44 0.00 43.33 3.34
354 355 6.718454 AGAATTCATCGATTCATCCGATTC 57.282 37.500 8.44 0.00 43.33 2.52
355 356 6.226052 AGAATTCATCGATTCATCCGATTCA 58.774 36.000 8.44 0.00 43.33 2.57
356 357 6.368243 AGAATTCATCGATTCATCCGATTCAG 59.632 38.462 8.44 0.00 43.33 3.02
357 358 4.853924 TCATCGATTCATCCGATTCAGA 57.146 40.909 0.00 0.00 43.33 3.27
358 359 4.550422 TCATCGATTCATCCGATTCAGAC 58.450 43.478 0.00 0.00 43.33 3.51
359 360 4.037923 TCATCGATTCATCCGATTCAGACA 59.962 41.667 0.00 0.00 43.33 3.41
360 361 4.590850 TCGATTCATCCGATTCAGACAT 57.409 40.909 0.00 0.00 0.00 3.06
361 362 4.948847 TCGATTCATCCGATTCAGACATT 58.051 39.130 0.00 0.00 0.00 2.71
362 363 4.746611 TCGATTCATCCGATTCAGACATTG 59.253 41.667 0.00 0.00 0.00 2.82
363 364 4.746611 CGATTCATCCGATTCAGACATTGA 59.253 41.667 0.00 0.00 0.00 2.57
364 365 5.407691 CGATTCATCCGATTCAGACATTGAT 59.592 40.000 0.00 0.00 35.27 2.57
365 366 5.996669 TTCATCCGATTCAGACATTGATG 57.003 39.130 0.00 0.00 35.27 3.07
366 367 4.383173 TCATCCGATTCAGACATTGATGG 58.617 43.478 0.00 0.00 35.27 3.51
367 368 3.912496 TCCGATTCAGACATTGATGGT 57.088 42.857 0.00 0.00 35.27 3.55
368 369 3.534554 TCCGATTCAGACATTGATGGTG 58.465 45.455 0.00 0.00 35.27 4.17
369 370 3.197549 TCCGATTCAGACATTGATGGTGA 59.802 43.478 0.00 0.00 35.27 4.02
370 371 3.310774 CCGATTCAGACATTGATGGTGAC 59.689 47.826 0.00 0.00 35.27 3.67
384 385 3.708403 TGGTGACAAAGATGCTGAGAT 57.292 42.857 0.00 0.00 37.44 2.75
385 386 3.340928 TGGTGACAAAGATGCTGAGATG 58.659 45.455 0.00 0.00 37.44 2.90
386 387 3.008266 TGGTGACAAAGATGCTGAGATGA 59.992 43.478 0.00 0.00 37.44 2.92
387 388 4.197750 GGTGACAAAGATGCTGAGATGAT 58.802 43.478 0.00 0.00 0.00 2.45
388 389 4.035324 GGTGACAAAGATGCTGAGATGATG 59.965 45.833 0.00 0.00 0.00 3.07
389 390 4.035324 GTGACAAAGATGCTGAGATGATGG 59.965 45.833 0.00 0.00 0.00 3.51
390 391 4.197750 GACAAAGATGCTGAGATGATGGT 58.802 43.478 0.00 0.00 0.00 3.55
391 392 3.945921 ACAAAGATGCTGAGATGATGGTG 59.054 43.478 0.00 0.00 0.00 4.17
392 393 2.932855 AGATGCTGAGATGATGGTGG 57.067 50.000 0.00 0.00 0.00 4.61
393 394 2.125233 AGATGCTGAGATGATGGTGGT 58.875 47.619 0.00 0.00 0.00 4.16
394 395 2.158798 AGATGCTGAGATGATGGTGGTG 60.159 50.000 0.00 0.00 0.00 4.17
395 396 1.278537 TGCTGAGATGATGGTGGTGA 58.721 50.000 0.00 0.00 0.00 4.02
396 397 1.208776 TGCTGAGATGATGGTGGTGAG 59.791 52.381 0.00 0.00 0.00 3.51
397 398 1.474677 GCTGAGATGATGGTGGTGAGG 60.475 57.143 0.00 0.00 0.00 3.86
398 399 2.113807 CTGAGATGATGGTGGTGAGGA 58.886 52.381 0.00 0.00 0.00 3.71
399 400 2.102757 CTGAGATGATGGTGGTGAGGAG 59.897 54.545 0.00 0.00 0.00 3.69
400 401 0.835941 AGATGATGGTGGTGAGGAGC 59.164 55.000 0.00 0.00 0.00 4.70
401 402 0.543277 GATGATGGTGGTGAGGAGCA 59.457 55.000 0.00 0.00 0.00 4.26
402 403 1.142465 GATGATGGTGGTGAGGAGCAT 59.858 52.381 0.00 0.00 34.27 3.79
403 404 0.543277 TGATGGTGGTGAGGAGCATC 59.457 55.000 0.00 0.00 44.86 3.91
416 417 1.964552 GAGCATCCCTGAAGACATGG 58.035 55.000 0.00 0.00 33.97 3.66
417 418 1.487976 GAGCATCCCTGAAGACATGGA 59.512 52.381 0.00 0.00 42.99 3.41
418 419 1.489649 AGCATCCCTGAAGACATGGAG 59.510 52.381 0.00 0.00 42.33 3.86
419 420 1.487976 GCATCCCTGAAGACATGGAGA 59.512 52.381 0.00 0.00 42.33 3.71
420 421 2.744494 GCATCCCTGAAGACATGGAGAC 60.744 54.545 0.00 0.00 42.33 3.36
421 422 1.186200 TCCCTGAAGACATGGAGACG 58.814 55.000 0.00 0.00 36.25 4.18
422 423 1.186200 CCCTGAAGACATGGAGACGA 58.814 55.000 0.00 0.00 34.45 4.20
423 424 1.550524 CCCTGAAGACATGGAGACGAA 59.449 52.381 0.00 0.00 34.45 3.85
424 425 2.028112 CCCTGAAGACATGGAGACGAAA 60.028 50.000 0.00 0.00 34.45 3.46
425 426 3.257393 CCTGAAGACATGGAGACGAAAG 58.743 50.000 0.00 0.00 0.00 2.62
426 427 6.366817 CCCTGAAGACATGGAGACGAAAGT 62.367 50.000 0.00 0.00 39.53 2.66
438 439 2.550830 ACGAAAGTGGAGCATGTTCT 57.449 45.000 9.57 0.00 46.97 3.01
439 440 2.417719 ACGAAAGTGGAGCATGTTCTC 58.582 47.619 9.57 0.65 46.97 2.87
440 441 2.224281 ACGAAAGTGGAGCATGTTCTCA 60.224 45.455 9.57 3.34 46.97 3.27
441 442 2.807967 CGAAAGTGGAGCATGTTCTCAA 59.192 45.455 9.57 0.00 34.84 3.02
442 443 3.438087 CGAAAGTGGAGCATGTTCTCAAT 59.562 43.478 9.57 2.74 34.84 2.57
443 444 4.083110 CGAAAGTGGAGCATGTTCTCAATT 60.083 41.667 9.57 8.36 34.84 2.32
444 445 5.563475 CGAAAGTGGAGCATGTTCTCAATTT 60.563 40.000 18.61 18.61 34.84 1.82
445 446 5.382618 AAGTGGAGCATGTTCTCAATTTC 57.617 39.130 9.57 0.00 34.84 2.17
446 447 4.401022 AGTGGAGCATGTTCTCAATTTCA 58.599 39.130 9.57 0.00 34.84 2.69
447 448 4.458295 AGTGGAGCATGTTCTCAATTTCAG 59.542 41.667 9.57 0.00 34.84 3.02
448 449 4.217118 GTGGAGCATGTTCTCAATTTCAGT 59.783 41.667 9.57 0.00 34.84 3.41
449 450 4.216902 TGGAGCATGTTCTCAATTTCAGTG 59.783 41.667 9.57 0.00 34.84 3.66
450 451 4.380233 GGAGCATGTTCTCAATTTCAGTGG 60.380 45.833 9.57 0.00 34.84 4.00
451 452 4.147321 AGCATGTTCTCAATTTCAGTGGT 58.853 39.130 0.00 0.00 0.00 4.16
452 453 4.586001 AGCATGTTCTCAATTTCAGTGGTT 59.414 37.500 0.00 0.00 0.00 3.67
453 454 4.919754 GCATGTTCTCAATTTCAGTGGTTC 59.080 41.667 0.00 0.00 0.00 3.62
454 455 5.507817 GCATGTTCTCAATTTCAGTGGTTCA 60.508 40.000 0.00 0.00 0.00 3.18
455 456 6.506147 CATGTTCTCAATTTCAGTGGTTCAA 58.494 36.000 0.00 0.00 0.00 2.69
456 457 6.713762 TGTTCTCAATTTCAGTGGTTCAAT 57.286 33.333 0.00 0.00 0.00 2.57
457 458 6.738114 TGTTCTCAATTTCAGTGGTTCAATC 58.262 36.000 0.00 0.00 0.00 2.67
458 459 6.320926 TGTTCTCAATTTCAGTGGTTCAATCA 59.679 34.615 0.00 0.00 0.00 2.57
459 460 6.957920 TCTCAATTTCAGTGGTTCAATCAA 57.042 33.333 0.00 0.00 0.00 2.57
460 461 6.973843 TCTCAATTTCAGTGGTTCAATCAAG 58.026 36.000 0.00 0.00 0.00 3.02
461 462 6.547141 TCTCAATTTCAGTGGTTCAATCAAGT 59.453 34.615 0.00 0.00 0.00 3.16
462 463 6.506147 TCAATTTCAGTGGTTCAATCAAGTG 58.494 36.000 0.00 0.00 0.00 3.16
463 464 6.320926 TCAATTTCAGTGGTTCAATCAAGTGA 59.679 34.615 0.00 0.00 0.00 3.41
464 465 5.756195 TTTCAGTGGTTCAATCAAGTGAG 57.244 39.130 0.00 0.00 0.00 3.51
465 466 3.141398 TCAGTGGTTCAATCAAGTGAGC 58.859 45.455 0.00 0.00 0.00 4.26
466 467 2.096069 CAGTGGTTCAATCAAGTGAGCG 60.096 50.000 0.00 0.00 30.07 5.03
467 468 1.197721 GTGGTTCAATCAAGTGAGCGG 59.802 52.381 0.00 0.00 30.07 5.52
468 469 1.071542 TGGTTCAATCAAGTGAGCGGA 59.928 47.619 0.00 0.00 30.07 5.54
469 470 2.151202 GGTTCAATCAAGTGAGCGGAA 58.849 47.619 0.00 0.00 30.07 4.30
470 471 2.552315 GGTTCAATCAAGTGAGCGGAAA 59.448 45.455 0.00 0.00 30.07 3.13
471 472 3.004315 GGTTCAATCAAGTGAGCGGAAAA 59.996 43.478 0.00 0.00 30.07 2.29
472 473 4.499019 GGTTCAATCAAGTGAGCGGAAAAA 60.499 41.667 0.00 0.00 30.07 1.94
473 474 4.488126 TCAATCAAGTGAGCGGAAAAAG 57.512 40.909 0.00 0.00 0.00 2.27
474 475 3.253188 TCAATCAAGTGAGCGGAAAAAGG 59.747 43.478 0.00 0.00 0.00 3.11
475 476 2.631160 TCAAGTGAGCGGAAAAAGGA 57.369 45.000 0.00 0.00 0.00 3.36
476 477 2.925724 TCAAGTGAGCGGAAAAAGGAA 58.074 42.857 0.00 0.00 0.00 3.36
477 478 2.616842 TCAAGTGAGCGGAAAAAGGAAC 59.383 45.455 0.00 0.00 0.00 3.62
478 479 2.341846 AGTGAGCGGAAAAAGGAACA 57.658 45.000 0.00 0.00 0.00 3.18
479 480 2.863809 AGTGAGCGGAAAAAGGAACAT 58.136 42.857 0.00 0.00 0.00 2.71
480 481 4.015872 AGTGAGCGGAAAAAGGAACATA 57.984 40.909 0.00 0.00 0.00 2.29
481 482 3.751698 AGTGAGCGGAAAAAGGAACATAC 59.248 43.478 0.00 0.00 0.00 2.39
482 483 3.500680 GTGAGCGGAAAAAGGAACATACA 59.499 43.478 0.00 0.00 0.00 2.29
483 484 3.500680 TGAGCGGAAAAAGGAACATACAC 59.499 43.478 0.00 0.00 0.00 2.90
484 485 2.817844 AGCGGAAAAAGGAACATACACC 59.182 45.455 0.00 0.00 0.00 4.16
485 486 2.094906 GCGGAAAAAGGAACATACACCC 60.095 50.000 0.00 0.00 0.00 4.61
486 487 3.418047 CGGAAAAAGGAACATACACCCT 58.582 45.455 0.00 0.00 0.00 4.34
487 488 3.439129 CGGAAAAAGGAACATACACCCTC 59.561 47.826 0.00 0.00 0.00 4.30
488 489 4.403734 GGAAAAAGGAACATACACCCTCA 58.596 43.478 0.00 0.00 0.00 3.86
489 490 4.830600 GGAAAAAGGAACATACACCCTCAA 59.169 41.667 0.00 0.00 0.00 3.02
490 491 5.048013 GGAAAAAGGAACATACACCCTCAAG 60.048 44.000 0.00 0.00 0.00 3.02
491 492 4.993705 AAAGGAACATACACCCTCAAGA 57.006 40.909 0.00 0.00 0.00 3.02
492 493 5.520748 AAAGGAACATACACCCTCAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
493 494 4.762289 AGGAACATACACCCTCAAGATC 57.238 45.455 0.00 0.00 0.00 2.75
494 495 3.133003 AGGAACATACACCCTCAAGATCG 59.867 47.826 0.00 0.00 0.00 3.69
495 496 3.118738 GGAACATACACCCTCAAGATCGT 60.119 47.826 0.00 0.00 0.00 3.73
496 497 3.526931 ACATACACCCTCAAGATCGTG 57.473 47.619 1.76 1.76 0.00 4.35
497 498 3.096852 ACATACACCCTCAAGATCGTGA 58.903 45.455 10.99 10.99 0.00 4.35
498 499 3.706594 ACATACACCCTCAAGATCGTGAT 59.293 43.478 11.88 0.00 0.00 3.06
499 500 4.162320 ACATACACCCTCAAGATCGTGATT 59.838 41.667 11.88 0.00 0.00 2.57
500 501 3.703001 ACACCCTCAAGATCGTGATTT 57.297 42.857 11.88 0.00 0.00 2.17
501 502 4.021102 ACACCCTCAAGATCGTGATTTT 57.979 40.909 11.88 0.00 0.00 1.82
502 503 4.003648 ACACCCTCAAGATCGTGATTTTC 58.996 43.478 11.88 0.00 0.00 2.29
503 504 4.256920 CACCCTCAAGATCGTGATTTTCT 58.743 43.478 11.88 0.00 0.00 2.52
504 505 4.697352 CACCCTCAAGATCGTGATTTTCTT 59.303 41.667 11.88 0.00 0.00 2.52
505 506 5.182001 CACCCTCAAGATCGTGATTTTCTTT 59.818 40.000 11.88 0.00 0.00 2.52
506 507 5.770162 ACCCTCAAGATCGTGATTTTCTTTT 59.230 36.000 11.88 0.00 0.00 2.27
507 508 6.940298 ACCCTCAAGATCGTGATTTTCTTTTA 59.060 34.615 11.88 0.00 0.00 1.52
508 509 7.094762 ACCCTCAAGATCGTGATTTTCTTTTAC 60.095 37.037 11.88 0.00 0.00 2.01
509 510 6.955963 CCTCAAGATCGTGATTTTCTTTTACG 59.044 38.462 11.88 0.00 36.20 3.18
510 511 7.360101 CCTCAAGATCGTGATTTTCTTTTACGT 60.360 37.037 11.88 0.00 36.28 3.57
511 512 7.857569 TCAAGATCGTGATTTTCTTTTACGTT 58.142 30.769 7.29 0.00 36.28 3.99
512 513 8.339714 TCAAGATCGTGATTTTCTTTTACGTTT 58.660 29.630 7.29 0.00 36.28 3.60
513 514 8.618952 CAAGATCGTGATTTTCTTTTACGTTTC 58.381 33.333 2.01 0.00 36.28 2.78
514 515 7.857569 AGATCGTGATTTTCTTTTACGTTTCA 58.142 30.769 0.00 0.00 36.28 2.69
515 516 8.339714 AGATCGTGATTTTCTTTTACGTTTCAA 58.660 29.630 0.00 0.00 36.28 2.69
516 517 9.113876 GATCGTGATTTTCTTTTACGTTTCAAT 57.886 29.630 0.00 0.00 36.28 2.57
517 518 8.844441 TCGTGATTTTCTTTTACGTTTCAATT 57.156 26.923 0.00 0.00 36.28 2.32
518 519 9.932699 TCGTGATTTTCTTTTACGTTTCAATTA 57.067 25.926 0.00 0.00 36.28 1.40
524 525 9.522804 TTTTCTTTTACGTTTCAATTATGCACT 57.477 25.926 0.00 0.00 0.00 4.40
525 526 8.722342 TTCTTTTACGTTTCAATTATGCACTC 57.278 30.769 0.00 0.00 0.00 3.51
526 527 7.866729 TCTTTTACGTTTCAATTATGCACTCA 58.133 30.769 0.00 0.00 0.00 3.41
585 586 7.718314 TGAAGACCTATCATTCAATTGAGGATG 59.282 37.037 24.08 18.81 30.33 3.51
594 595 7.507829 TCATTCAATTGAGGATGTTGGTTTTT 58.492 30.769 16.18 0.00 0.00 1.94
595 596 7.656948 TCATTCAATTGAGGATGTTGGTTTTTC 59.343 33.333 16.18 0.00 0.00 2.29
601 602 2.965147 AGGATGTTGGTTTTTCACTGGG 59.035 45.455 0.00 0.00 0.00 4.45
615 616 2.091610 TCACTGGGTTCCCAATTTGACA 60.092 45.455 11.94 0.00 35.46 3.58
643 644 8.451748 GGTCAACGATTTTTAATAAGCTCTCTT 58.548 33.333 0.00 0.00 36.35 2.85
662 663 4.584874 TCTTGTTCAAGTGAGGTGTTCAA 58.415 39.130 11.52 0.00 37.61 2.69
726 727 4.143543 TCTCAAATCAACCATCAGCAACA 58.856 39.130 0.00 0.00 0.00 3.33
740 1539 9.797642 ACCATCAGCAACAATAGAAATATATCA 57.202 29.630 0.00 0.00 0.00 2.15
801 1600 5.126869 TCAAAGGACTGCTGAAAACATGAAA 59.873 36.000 0.00 0.00 0.00 2.69
802 1601 5.596836 AAGGACTGCTGAAAACATGAAAA 57.403 34.783 0.00 0.00 0.00 2.29
803 1602 5.192327 AGGACTGCTGAAAACATGAAAAG 57.808 39.130 0.00 0.00 0.00 2.27
804 1603 4.038402 AGGACTGCTGAAAACATGAAAAGG 59.962 41.667 0.00 0.00 0.00 3.11
1026 1832 0.036388 CCTTCCGTCTAGGCAAGCAA 60.036 55.000 0.00 0.00 40.77 3.91
1050 1856 3.723348 GGCGCGAACACCAAGTCC 61.723 66.667 12.10 0.00 0.00 3.85
1136 1942 4.477213 TCCCTCCCAAATCCTAACCTAAAG 59.523 45.833 0.00 0.00 0.00 1.85
1210 2016 3.213402 CGTCTCGGCCTCCTCCTC 61.213 72.222 0.00 0.00 0.00 3.71
1211 2017 2.835895 GTCTCGGCCTCCTCCTCC 60.836 72.222 0.00 0.00 0.00 4.30
1212 2018 3.024356 TCTCGGCCTCCTCCTCCT 61.024 66.667 0.00 0.00 0.00 3.69
2110 2925 5.845433 GCTGAAACTTGTTTGTTTGTTGTTG 59.155 36.000 3.27 0.00 39.86 3.33
2111 2926 6.510960 GCTGAAACTTGTTTGTTTGTTGTTGT 60.511 34.615 3.27 0.00 39.86 3.32
2112 2927 7.308782 TGAAACTTGTTTGTTTGTTGTTGTT 57.691 28.000 3.27 0.00 39.86 2.83
2113 2928 7.752695 TGAAACTTGTTTGTTTGTTGTTGTTT 58.247 26.923 3.27 0.00 39.86 2.83
2156 2971 3.324556 CACATTCTTTGGGTTGGATGGTT 59.675 43.478 0.00 0.00 0.00 3.67
2175 2991 3.244181 GGTTTTGCATCCCTCATTTGTGT 60.244 43.478 0.00 0.00 0.00 3.72
2179 2995 5.798125 TTGCATCCCTCATTTGTGTTAAA 57.202 34.783 0.00 0.00 0.00 1.52
2226 3042 2.787994 AGGAGTGGTGAAAGATTGCAG 58.212 47.619 0.00 0.00 0.00 4.41
2382 3218 7.278646 CACGATGAAGAATCCTCATTGACTTTA 59.721 37.037 14.32 0.00 30.80 1.85
2406 3242 6.772078 ACAGTTACAGAAACGAAAAACAGAG 58.228 36.000 0.00 0.00 43.29 3.35
2441 3277 8.458573 ACAATACCTTTACAACAGTTTCATGA 57.541 30.769 0.00 0.00 0.00 3.07
2667 3524 0.454196 ACCGGCAATGTAAATTCGGC 59.546 50.000 0.00 0.15 40.95 5.54
2880 3923 1.148157 CGCTGTACAGATCGGGCTTG 61.148 60.000 27.08 0.00 0.00 4.01
2886 3929 0.108615 ACAGATCGGGCTTGTCTTCG 60.109 55.000 0.00 0.00 0.00 3.79
2986 4029 2.170607 GCCAGGATCCACTTAAGCACTA 59.829 50.000 15.82 0.00 0.00 2.74
3101 4144 9.916397 CCAGACGAAAATAATAATACAACTGTC 57.084 33.333 0.00 0.00 0.00 3.51
3193 4246 4.518249 GGGGAAAATGACACTCTTCTAGG 58.482 47.826 0.00 0.00 0.00 3.02
3203 4256 6.591935 TGACACTCTTCTAGGAAACAAACAT 58.408 36.000 0.00 0.00 0.00 2.71
3219 4278 7.786178 AACAAACATATATATGTGACGCTGT 57.214 32.000 25.42 19.32 45.55 4.40
3235 4294 2.352617 CGCTGTGGTTTATGCCAAACAT 60.353 45.455 11.73 0.00 40.68 2.71
3250 4309 5.207768 GCCAAACATAGCTGATCATAAACG 58.792 41.667 0.00 0.00 0.00 3.60
3263 4322 9.047871 GCTGATCATAAACGTTTTAGTGTAAAC 57.952 33.333 20.19 9.36 35.23 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.725556 TGTCTTCACGTGCAATAGTTTC 57.274 40.909 11.67 2.73 0.00 2.78
2 3 3.874543 TGTTGTCTTCACGTGCAATAGTT 59.125 39.130 11.67 0.00 0.00 2.24
3 4 3.462982 TGTTGTCTTCACGTGCAATAGT 58.537 40.909 11.67 0.00 0.00 2.12
4 5 4.211389 GTTGTTGTCTTCACGTGCAATAG 58.789 43.478 11.67 5.62 0.00 1.73
5 6 3.623510 TGTTGTTGTCTTCACGTGCAATA 59.376 39.130 11.67 4.84 0.00 1.90
6 7 2.421775 TGTTGTTGTCTTCACGTGCAAT 59.578 40.909 11.67 0.00 0.00 3.56
7 8 1.807142 TGTTGTTGTCTTCACGTGCAA 59.193 42.857 11.67 6.45 0.00 4.08
8 9 1.443802 TGTTGTTGTCTTCACGTGCA 58.556 45.000 11.67 0.00 0.00 4.57
9 10 2.535934 TTGTTGTTGTCTTCACGTGC 57.464 45.000 11.67 0.00 0.00 5.34
49 50 3.165071 AGGTATTTGTTGGGCCTGAAAG 58.835 45.455 4.53 0.00 0.00 2.62
50 51 3.161866 GAGGTATTTGTTGGGCCTGAAA 58.838 45.455 4.53 1.10 0.00 2.69
51 52 2.378547 AGAGGTATTTGTTGGGCCTGAA 59.621 45.455 4.53 0.00 0.00 3.02
52 53 1.992557 AGAGGTATTTGTTGGGCCTGA 59.007 47.619 4.53 0.00 0.00 3.86
53 54 2.514458 AGAGGTATTTGTTGGGCCTG 57.486 50.000 4.53 0.00 0.00 4.85
54 55 2.378547 TGAAGAGGTATTTGTTGGGCCT 59.621 45.455 4.53 0.00 0.00 5.19
55 56 2.802719 TGAAGAGGTATTTGTTGGGCC 58.197 47.619 0.00 0.00 0.00 5.80
56 57 3.826729 ACTTGAAGAGGTATTTGTTGGGC 59.173 43.478 0.00 0.00 0.00 5.36
57 58 6.001460 TGTACTTGAAGAGGTATTTGTTGGG 58.999 40.000 0.00 0.00 0.00 4.12
58 59 7.687941 ATGTACTTGAAGAGGTATTTGTTGG 57.312 36.000 0.00 0.00 0.00 3.77
67 68 9.847224 TTTCTTTCTTAATGTACTTGAAGAGGT 57.153 29.630 0.00 0.00 30.03 3.85
70 71 9.621629 TGGTTTCTTTCTTAATGTACTTGAAGA 57.378 29.630 0.00 4.73 0.00 2.87
71 72 9.665264 GTGGTTTCTTTCTTAATGTACTTGAAG 57.335 33.333 0.19 0.19 0.00 3.02
72 73 9.179909 TGTGGTTTCTTTCTTAATGTACTTGAA 57.820 29.630 0.00 0.00 0.00 2.69
73 74 8.617809 GTGTGGTTTCTTTCTTAATGTACTTGA 58.382 33.333 0.00 0.00 0.00 3.02
74 75 8.402472 TGTGTGGTTTCTTTCTTAATGTACTTG 58.598 33.333 0.00 0.00 0.00 3.16
75 76 8.514330 TGTGTGGTTTCTTTCTTAATGTACTT 57.486 30.769 0.00 0.00 0.00 2.24
76 77 8.567948 CATGTGTGGTTTCTTTCTTAATGTACT 58.432 33.333 0.00 0.00 0.00 2.73
77 78 8.349983 ACATGTGTGGTTTCTTTCTTAATGTAC 58.650 33.333 0.00 0.00 0.00 2.90
78 79 8.458573 ACATGTGTGGTTTCTTTCTTAATGTA 57.541 30.769 0.00 0.00 0.00 2.29
79 80 7.346751 ACATGTGTGGTTTCTTTCTTAATGT 57.653 32.000 0.00 0.00 0.00 2.71
80 81 6.863126 GGACATGTGTGGTTTCTTTCTTAATG 59.137 38.462 1.15 0.00 0.00 1.90
81 82 6.549364 TGGACATGTGTGGTTTCTTTCTTAAT 59.451 34.615 1.15 0.00 0.00 1.40
82 83 5.888724 TGGACATGTGTGGTTTCTTTCTTAA 59.111 36.000 1.15 0.00 0.00 1.85
83 84 5.441500 TGGACATGTGTGGTTTCTTTCTTA 58.558 37.500 1.15 0.00 0.00 2.10
84 85 4.277476 TGGACATGTGTGGTTTCTTTCTT 58.723 39.130 1.15 0.00 0.00 2.52
85 86 3.885297 CTGGACATGTGTGGTTTCTTTCT 59.115 43.478 1.15 0.00 0.00 2.52
86 87 3.882888 TCTGGACATGTGTGGTTTCTTTC 59.117 43.478 1.15 0.00 0.00 2.62
87 88 3.897239 TCTGGACATGTGTGGTTTCTTT 58.103 40.909 1.15 0.00 0.00 2.52
88 89 3.576078 TCTGGACATGTGTGGTTTCTT 57.424 42.857 1.15 0.00 0.00 2.52
89 90 3.795688 ATCTGGACATGTGTGGTTTCT 57.204 42.857 1.15 0.00 0.00 2.52
90 91 4.579869 ACTATCTGGACATGTGTGGTTTC 58.420 43.478 1.15 0.00 0.00 2.78
91 92 4.640771 ACTATCTGGACATGTGTGGTTT 57.359 40.909 1.15 0.00 0.00 3.27
92 93 4.287067 AGAACTATCTGGACATGTGTGGTT 59.713 41.667 1.15 0.00 33.59 3.67
93 94 3.840666 AGAACTATCTGGACATGTGTGGT 59.159 43.478 1.15 0.00 33.59 4.16
94 95 4.081476 TGAGAACTATCTGGACATGTGTGG 60.081 45.833 1.15 0.00 35.54 4.17
95 96 5.077134 TGAGAACTATCTGGACATGTGTG 57.923 43.478 1.15 0.00 35.54 3.82
96 97 5.482908 GTTGAGAACTATCTGGACATGTGT 58.517 41.667 1.15 0.00 35.54 3.72
97 98 4.564372 CGTTGAGAACTATCTGGACATGTG 59.436 45.833 1.15 0.00 35.54 3.21
98 99 4.462834 TCGTTGAGAACTATCTGGACATGT 59.537 41.667 0.00 0.00 35.54 3.21
99 100 4.998788 TCGTTGAGAACTATCTGGACATG 58.001 43.478 0.00 0.00 35.54 3.21
100 101 5.419155 TCTTCGTTGAGAACTATCTGGACAT 59.581 40.000 0.00 0.00 35.54 3.06
101 102 4.765339 TCTTCGTTGAGAACTATCTGGACA 59.235 41.667 0.00 0.00 35.54 4.02
102 103 5.312120 TCTTCGTTGAGAACTATCTGGAC 57.688 43.478 0.00 0.00 35.54 4.02
103 104 5.710567 TCTTCTTCGTTGAGAACTATCTGGA 59.289 40.000 0.00 0.00 35.54 3.86
104 105 5.802956 GTCTTCTTCGTTGAGAACTATCTGG 59.197 44.000 0.00 0.00 35.54 3.86
105 106 5.802956 GGTCTTCTTCGTTGAGAACTATCTG 59.197 44.000 0.00 0.00 35.54 2.90
106 107 5.105675 GGGTCTTCTTCGTTGAGAACTATCT 60.106 44.000 0.00 0.00 39.10 1.98
107 108 5.103687 GGGTCTTCTTCGTTGAGAACTATC 58.896 45.833 0.00 0.00 34.66 2.08
108 109 4.081586 GGGGTCTTCTTCGTTGAGAACTAT 60.082 45.833 0.00 0.00 34.66 2.12
109 110 3.257624 GGGGTCTTCTTCGTTGAGAACTA 59.742 47.826 0.00 0.00 34.66 2.24
110 111 2.037381 GGGGTCTTCTTCGTTGAGAACT 59.963 50.000 0.00 0.00 34.66 3.01
111 112 2.414806 GGGGTCTTCTTCGTTGAGAAC 58.585 52.381 0.00 0.00 34.66 3.01
112 113 1.000506 CGGGGTCTTCTTCGTTGAGAA 59.999 52.381 0.00 0.00 37.31 2.87
113 114 0.601558 CGGGGTCTTCTTCGTTGAGA 59.398 55.000 0.00 0.00 0.00 3.27
114 115 0.317479 ACGGGGTCTTCTTCGTTGAG 59.683 55.000 0.00 0.00 31.38 3.02
115 116 0.316204 GACGGGGTCTTCTTCGTTGA 59.684 55.000 0.00 0.00 35.91 3.18
116 117 1.007336 CGACGGGGTCTTCTTCGTTG 61.007 60.000 0.00 0.00 35.91 4.10
117 118 1.288127 CGACGGGGTCTTCTTCGTT 59.712 57.895 0.00 0.00 35.91 3.85
118 119 1.900498 ACGACGGGGTCTTCTTCGT 60.900 57.895 0.00 0.00 38.07 3.85
119 120 1.443872 CACGACGGGGTCTTCTTCG 60.444 63.158 0.00 0.00 35.80 3.79
120 121 0.388263 GTCACGACGGGGTCTTCTTC 60.388 60.000 0.00 0.00 0.00 2.87
121 122 1.111116 TGTCACGACGGGGTCTTCTT 61.111 55.000 0.00 0.00 0.00 2.52
122 123 0.898789 ATGTCACGACGGGGTCTTCT 60.899 55.000 0.00 0.00 0.00 2.85
123 124 0.458025 GATGTCACGACGGGGTCTTC 60.458 60.000 0.00 0.00 0.00 2.87
124 125 0.898789 AGATGTCACGACGGGGTCTT 60.899 55.000 0.00 0.00 0.00 3.01
125 126 0.034767 TAGATGTCACGACGGGGTCT 60.035 55.000 0.00 1.55 0.00 3.85
126 127 0.100146 GTAGATGTCACGACGGGGTC 59.900 60.000 0.00 0.00 0.00 4.46
127 128 0.609957 TGTAGATGTCACGACGGGGT 60.610 55.000 0.00 0.00 0.00 4.95
128 129 0.528924 TTGTAGATGTCACGACGGGG 59.471 55.000 0.00 0.00 0.00 5.73
129 130 2.357327 TTTGTAGATGTCACGACGGG 57.643 50.000 0.00 0.00 0.00 5.28
130 131 6.583912 ATTTATTTGTAGATGTCACGACGG 57.416 37.500 0.00 0.00 0.00 4.79
131 132 9.961266 TTAAATTTATTTGTAGATGTCACGACG 57.039 29.630 0.00 0.00 0.00 5.12
228 229 9.976511 GATGAATGTTTGGATCAACAATATGAT 57.023 29.630 3.02 0.00 42.62 2.45
229 230 9.192642 AGATGAATGTTTGGATCAACAATATGA 57.807 29.630 3.02 0.00 0.00 2.15
230 231 9.811995 AAGATGAATGTTTGGATCAACAATATG 57.188 29.630 3.02 0.00 0.00 1.78
232 233 9.022884 TGAAGATGAATGTTTGGATCAACAATA 57.977 29.630 3.02 0.00 0.00 1.90
233 234 7.898918 TGAAGATGAATGTTTGGATCAACAAT 58.101 30.769 3.02 0.00 0.00 2.71
234 235 7.287512 TGAAGATGAATGTTTGGATCAACAA 57.712 32.000 3.02 0.00 0.00 2.83
235 236 6.897706 TGAAGATGAATGTTTGGATCAACA 57.102 33.333 1.48 1.48 0.00 3.33
236 237 9.512435 CTATTGAAGATGAATGTTTGGATCAAC 57.488 33.333 0.00 0.00 0.00 3.18
237 238 9.465199 TCTATTGAAGATGAATGTTTGGATCAA 57.535 29.630 0.00 0.00 0.00 2.57
238 239 9.465199 TTCTATTGAAGATGAATGTTTGGATCA 57.535 29.630 0.00 0.00 33.05 2.92
239 240 9.727627 GTTCTATTGAAGATGAATGTTTGGATC 57.272 33.333 0.00 0.00 33.05 3.36
240 241 9.246670 TGTTCTATTGAAGATGAATGTTTGGAT 57.753 29.630 0.00 0.00 33.05 3.41
241 242 8.634335 TGTTCTATTGAAGATGAATGTTTGGA 57.366 30.769 0.00 0.00 33.05 3.53
242 243 9.695526 TTTGTTCTATTGAAGATGAATGTTTGG 57.304 29.630 0.00 0.00 33.05 3.28
246 247 9.362539 GCATTTTGTTCTATTGAAGATGAATGT 57.637 29.630 16.55 0.00 35.00 2.71
247 248 8.814235 GGCATTTTGTTCTATTGAAGATGAATG 58.186 33.333 13.69 13.69 35.27 2.67
248 249 8.533657 TGGCATTTTGTTCTATTGAAGATGAAT 58.466 29.630 0.00 0.00 33.05 2.57
249 250 7.894708 TGGCATTTTGTTCTATTGAAGATGAA 58.105 30.769 0.00 0.00 33.05 2.57
250 251 7.465353 TGGCATTTTGTTCTATTGAAGATGA 57.535 32.000 0.00 0.00 33.05 2.92
251 252 7.437267 GGATGGCATTTTGTTCTATTGAAGATG 59.563 37.037 0.00 0.00 33.05 2.90
252 253 7.124599 TGGATGGCATTTTGTTCTATTGAAGAT 59.875 33.333 0.00 0.00 33.05 2.40
253 254 6.436847 TGGATGGCATTTTGTTCTATTGAAGA 59.563 34.615 0.00 0.00 32.15 2.87
254 255 6.632909 TGGATGGCATTTTGTTCTATTGAAG 58.367 36.000 0.00 0.00 32.15 3.02
255 256 6.602410 TGGATGGCATTTTGTTCTATTGAA 57.398 33.333 0.00 0.00 0.00 2.69
256 257 6.602410 TTGGATGGCATTTTGTTCTATTGA 57.398 33.333 0.00 0.00 0.00 2.57
257 258 7.334921 ACATTTGGATGGCATTTTGTTCTATTG 59.665 33.333 0.00 0.00 37.60 1.90
258 259 7.396418 ACATTTGGATGGCATTTTGTTCTATT 58.604 30.769 0.00 0.00 37.60 1.73
259 260 6.949715 ACATTTGGATGGCATTTTGTTCTAT 58.050 32.000 0.00 0.00 37.60 1.98
260 261 6.357579 ACATTTGGATGGCATTTTGTTCTA 57.642 33.333 0.00 0.00 37.60 2.10
261 262 5.231702 ACATTTGGATGGCATTTTGTTCT 57.768 34.783 0.00 0.00 37.60 3.01
262 263 7.119553 ACAATACATTTGGATGGCATTTTGTTC 59.880 33.333 0.00 0.00 37.60 3.18
263 264 6.941436 ACAATACATTTGGATGGCATTTTGTT 59.059 30.769 0.00 0.00 37.60 2.83
264 265 6.474630 ACAATACATTTGGATGGCATTTTGT 58.525 32.000 0.00 4.42 37.60 2.83
265 266 6.988622 ACAATACATTTGGATGGCATTTTG 57.011 33.333 0.00 0.00 37.60 2.44
266 267 7.552330 GGTTACAATACATTTGGATGGCATTTT 59.448 33.333 0.00 0.00 37.60 1.82
267 268 7.047271 GGTTACAATACATTTGGATGGCATTT 58.953 34.615 0.00 0.00 37.60 2.32
268 269 6.155910 TGGTTACAATACATTTGGATGGCATT 59.844 34.615 0.00 0.00 37.60 3.56
269 270 5.660417 TGGTTACAATACATTTGGATGGCAT 59.340 36.000 0.00 0.00 37.60 4.40
270 271 5.019470 TGGTTACAATACATTTGGATGGCA 58.981 37.500 0.00 0.00 37.60 4.92
271 272 5.590530 TGGTTACAATACATTTGGATGGC 57.409 39.130 0.00 0.00 37.60 4.40
272 273 8.477256 AGAATTGGTTACAATACATTTGGATGG 58.523 33.333 0.00 0.00 46.25 3.51
273 274 9.520204 GAGAATTGGTTACAATACATTTGGATG 57.480 33.333 0.00 0.00 46.25 3.51
274 275 8.405531 CGAGAATTGGTTACAATACATTTGGAT 58.594 33.333 0.00 0.00 46.25 3.41
275 276 7.627513 GCGAGAATTGGTTACAATACATTTGGA 60.628 37.037 0.00 0.00 46.25 3.53
276 277 6.472163 GCGAGAATTGGTTACAATACATTTGG 59.528 38.462 0.00 0.00 46.25 3.28
277 278 6.472163 GGCGAGAATTGGTTACAATACATTTG 59.528 38.462 0.00 0.00 46.25 2.32
278 279 6.560711 GGCGAGAATTGGTTACAATACATTT 58.439 36.000 0.00 0.00 46.25 2.32
279 280 5.220777 CGGCGAGAATTGGTTACAATACATT 60.221 40.000 0.00 0.00 46.25 2.71
280 281 4.272504 CGGCGAGAATTGGTTACAATACAT 59.727 41.667 0.00 0.00 46.25 2.29
281 282 3.619483 CGGCGAGAATTGGTTACAATACA 59.381 43.478 0.00 0.00 46.25 2.29
282 283 3.545426 GCGGCGAGAATTGGTTACAATAC 60.545 47.826 12.98 0.00 46.25 1.89
283 284 2.610374 GCGGCGAGAATTGGTTACAATA 59.390 45.455 12.98 0.00 46.25 1.90
285 286 0.800012 GCGGCGAGAATTGGTTACAA 59.200 50.000 12.98 0.00 41.59 2.41
286 287 0.320858 TGCGGCGAGAATTGGTTACA 60.321 50.000 12.98 0.00 0.00 2.41
287 288 0.800012 TTGCGGCGAGAATTGGTTAC 59.200 50.000 12.98 0.00 0.00 2.50
288 289 0.800012 GTTGCGGCGAGAATTGGTTA 59.200 50.000 12.98 0.00 0.00 2.85
289 290 1.579429 GTTGCGGCGAGAATTGGTT 59.421 52.632 12.98 0.00 0.00 3.67
290 291 2.677003 CGTTGCGGCGAGAATTGGT 61.677 57.895 12.98 0.00 0.00 3.67
291 292 2.098298 CGTTGCGGCGAGAATTGG 59.902 61.111 12.98 0.00 0.00 3.16
292 293 2.574212 GCGTTGCGGCGAGAATTG 60.574 61.111 12.98 0.62 0.00 2.32
293 294 3.047280 TGCGTTGCGGCGAGAATT 61.047 55.556 12.98 0.00 35.06 2.17
294 295 3.788766 GTGCGTTGCGGCGAGAAT 61.789 61.111 12.98 0.00 35.06 2.40
302 303 1.155424 ATAATACCCCGTGCGTTGCG 61.155 55.000 0.00 0.00 0.00 4.85
303 304 0.584876 GATAATACCCCGTGCGTTGC 59.415 55.000 0.00 0.00 0.00 4.17
304 305 2.234300 AGATAATACCCCGTGCGTTG 57.766 50.000 0.00 0.00 0.00 4.10
305 306 2.961062 AGTAGATAATACCCCGTGCGTT 59.039 45.455 0.00 0.00 0.00 4.84
306 307 2.590821 AGTAGATAATACCCCGTGCGT 58.409 47.619 0.00 0.00 0.00 5.24
307 308 3.005050 TGAAGTAGATAATACCCCGTGCG 59.995 47.826 0.00 0.00 0.00 5.34
308 309 4.595762 TGAAGTAGATAATACCCCGTGC 57.404 45.455 0.00 0.00 0.00 5.34
309 310 6.812998 TCTTTGAAGTAGATAATACCCCGTG 58.187 40.000 0.00 0.00 0.00 4.94
310 311 7.427989 TTCTTTGAAGTAGATAATACCCCGT 57.572 36.000 0.00 0.00 0.00 5.28
311 312 8.904099 AATTCTTTGAAGTAGATAATACCCCG 57.096 34.615 0.00 0.00 0.00 5.73
312 313 9.847224 TGAATTCTTTGAAGTAGATAATACCCC 57.153 33.333 7.05 0.00 0.00 4.95
320 321 9.605275 TGAATCGATGAATTCTTTGAAGTAGAT 57.395 29.630 13.65 0.00 36.73 1.98
321 322 9.605275 ATGAATCGATGAATTCTTTGAAGTAGA 57.395 29.630 13.65 0.64 36.73 2.59
322 323 9.861138 GATGAATCGATGAATTCTTTGAAGTAG 57.139 33.333 13.65 0.00 36.73 2.57
323 324 8.830580 GGATGAATCGATGAATTCTTTGAAGTA 58.169 33.333 13.65 5.39 36.73 2.24
324 325 7.466455 CGGATGAATCGATGAATTCTTTGAAGT 60.466 37.037 13.65 6.61 36.73 3.01
325 326 6.849811 CGGATGAATCGATGAATTCTTTGAAG 59.150 38.462 13.65 0.00 36.73 3.02
326 327 6.538381 TCGGATGAATCGATGAATTCTTTGAA 59.462 34.615 13.65 0.92 36.73 2.69
327 328 6.048509 TCGGATGAATCGATGAATTCTTTGA 58.951 36.000 12.38 12.38 36.73 2.69
328 329 6.291067 TCGGATGAATCGATGAATTCTTTG 57.709 37.500 7.05 4.65 36.73 2.77
329 330 7.227314 TGAATCGGATGAATCGATGAATTCTTT 59.773 33.333 7.05 0.00 45.20 2.52
330 331 6.707608 TGAATCGGATGAATCGATGAATTCTT 59.292 34.615 7.05 0.00 45.20 2.52
331 332 6.226052 TGAATCGGATGAATCGATGAATTCT 58.774 36.000 7.05 0.00 45.20 2.40
332 333 6.367149 TCTGAATCGGATGAATCGATGAATTC 59.633 38.462 0.00 0.00 45.20 2.17
333 334 6.146837 GTCTGAATCGGATGAATCGATGAATT 59.853 38.462 0.00 0.00 45.20 2.17
334 335 5.636965 GTCTGAATCGGATGAATCGATGAAT 59.363 40.000 0.00 0.00 45.20 2.57
335 336 4.984785 GTCTGAATCGGATGAATCGATGAA 59.015 41.667 0.00 0.00 45.20 2.57
336 337 4.037923 TGTCTGAATCGGATGAATCGATGA 59.962 41.667 0.00 0.00 45.20 2.92
337 338 4.301628 TGTCTGAATCGGATGAATCGATG 58.698 43.478 0.00 0.00 45.20 3.84
339 340 4.590850 ATGTCTGAATCGGATGAATCGA 57.409 40.909 0.00 0.00 41.04 3.59
340 341 4.746611 TCAATGTCTGAATCGGATGAATCG 59.253 41.667 0.00 0.00 0.00 3.34
341 342 6.348295 CCATCAATGTCTGAATCGGATGAATC 60.348 42.308 0.00 0.00 37.67 2.52
342 343 5.472478 CCATCAATGTCTGAATCGGATGAAT 59.528 40.000 0.00 0.00 37.67 2.57
343 344 4.818005 CCATCAATGTCTGAATCGGATGAA 59.182 41.667 0.00 0.00 37.67 2.57
344 345 4.141642 ACCATCAATGTCTGAATCGGATGA 60.142 41.667 0.00 0.00 37.67 2.92
345 346 4.024302 CACCATCAATGTCTGAATCGGATG 60.024 45.833 0.00 0.00 37.67 3.51
346 347 4.132336 CACCATCAATGTCTGAATCGGAT 58.868 43.478 0.00 0.00 37.67 4.18
347 348 3.197549 TCACCATCAATGTCTGAATCGGA 59.802 43.478 0.00 0.00 37.67 4.55
348 349 3.310774 GTCACCATCAATGTCTGAATCGG 59.689 47.826 0.00 0.00 37.67 4.18
349 350 3.934579 TGTCACCATCAATGTCTGAATCG 59.065 43.478 0.00 0.00 37.67 3.34
350 351 5.885230 TTGTCACCATCAATGTCTGAATC 57.115 39.130 0.00 0.00 37.67 2.52
351 352 6.005823 TCTTTGTCACCATCAATGTCTGAAT 58.994 36.000 0.00 0.00 37.67 2.57
352 353 5.375773 TCTTTGTCACCATCAATGTCTGAA 58.624 37.500 0.00 0.00 37.67 3.02
353 354 4.971939 TCTTTGTCACCATCAATGTCTGA 58.028 39.130 0.00 0.00 38.81 3.27
354 355 5.637809 CATCTTTGTCACCATCAATGTCTG 58.362 41.667 0.00 0.00 0.00 3.51
355 356 4.157289 GCATCTTTGTCACCATCAATGTCT 59.843 41.667 0.00 0.00 0.00 3.41
356 357 4.157289 AGCATCTTTGTCACCATCAATGTC 59.843 41.667 0.00 0.00 0.00 3.06
357 358 4.082408 CAGCATCTTTGTCACCATCAATGT 60.082 41.667 0.00 0.00 0.00 2.71
358 359 4.157105 TCAGCATCTTTGTCACCATCAATG 59.843 41.667 0.00 0.00 0.00 2.82
359 360 4.338012 TCAGCATCTTTGTCACCATCAAT 58.662 39.130 0.00 0.00 0.00 2.57
360 361 3.753815 TCAGCATCTTTGTCACCATCAA 58.246 40.909 0.00 0.00 0.00 2.57
361 362 3.008266 TCTCAGCATCTTTGTCACCATCA 59.992 43.478 0.00 0.00 0.00 3.07
362 363 3.603532 TCTCAGCATCTTTGTCACCATC 58.396 45.455 0.00 0.00 0.00 3.51
363 364 3.708403 TCTCAGCATCTTTGTCACCAT 57.292 42.857 0.00 0.00 0.00 3.55
364 365 3.008266 TCATCTCAGCATCTTTGTCACCA 59.992 43.478 0.00 0.00 0.00 4.17
365 366 3.603532 TCATCTCAGCATCTTTGTCACC 58.396 45.455 0.00 0.00 0.00 4.02
366 367 4.035324 CCATCATCTCAGCATCTTTGTCAC 59.965 45.833 0.00 0.00 0.00 3.67
367 368 4.196971 CCATCATCTCAGCATCTTTGTCA 58.803 43.478 0.00 0.00 0.00 3.58
368 369 4.035324 CACCATCATCTCAGCATCTTTGTC 59.965 45.833 0.00 0.00 0.00 3.18
369 370 3.945921 CACCATCATCTCAGCATCTTTGT 59.054 43.478 0.00 0.00 0.00 2.83
370 371 3.315470 CCACCATCATCTCAGCATCTTTG 59.685 47.826 0.00 0.00 0.00 2.77
371 372 3.053842 ACCACCATCATCTCAGCATCTTT 60.054 43.478 0.00 0.00 0.00 2.52
372 373 2.508716 ACCACCATCATCTCAGCATCTT 59.491 45.455 0.00 0.00 0.00 2.40
373 374 2.125233 ACCACCATCATCTCAGCATCT 58.875 47.619 0.00 0.00 0.00 2.90
374 375 2.158856 TCACCACCATCATCTCAGCATC 60.159 50.000 0.00 0.00 0.00 3.91
375 376 1.841919 TCACCACCATCATCTCAGCAT 59.158 47.619 0.00 0.00 0.00 3.79
376 377 1.208776 CTCACCACCATCATCTCAGCA 59.791 52.381 0.00 0.00 0.00 4.41
377 378 1.474677 CCTCACCACCATCATCTCAGC 60.475 57.143 0.00 0.00 0.00 4.26
378 379 2.102757 CTCCTCACCACCATCATCTCAG 59.897 54.545 0.00 0.00 0.00 3.35
379 380 2.113807 CTCCTCACCACCATCATCTCA 58.886 52.381 0.00 0.00 0.00 3.27
380 381 1.202627 GCTCCTCACCACCATCATCTC 60.203 57.143 0.00 0.00 0.00 2.75
381 382 0.835941 GCTCCTCACCACCATCATCT 59.164 55.000 0.00 0.00 0.00 2.90
382 383 0.543277 TGCTCCTCACCACCATCATC 59.457 55.000 0.00 0.00 0.00 2.92
383 384 1.142465 GATGCTCCTCACCACCATCAT 59.858 52.381 0.00 0.00 34.09 2.45
384 385 0.543277 GATGCTCCTCACCACCATCA 59.457 55.000 0.00 0.00 34.09 3.07
385 386 0.179034 GGATGCTCCTCACCACCATC 60.179 60.000 0.00 0.00 32.53 3.51
386 387 1.639635 GGGATGCTCCTCACCACCAT 61.640 60.000 2.79 0.00 36.57 3.55
387 388 2.300967 GGGATGCTCCTCACCACCA 61.301 63.158 2.79 0.00 36.57 4.17
388 389 1.997874 AGGGATGCTCCTCACCACC 60.998 63.158 2.79 0.00 36.57 4.61
389 390 1.222936 CAGGGATGCTCCTCACCAC 59.777 63.158 2.79 0.00 36.57 4.16
390 391 0.547471 TTCAGGGATGCTCCTCACCA 60.547 55.000 2.79 0.00 36.57 4.17
391 392 0.179936 CTTCAGGGATGCTCCTCACC 59.820 60.000 2.79 0.00 36.57 4.02
392 393 1.134551 GTCTTCAGGGATGCTCCTCAC 60.135 57.143 2.79 0.00 36.57 3.51
393 394 1.198713 GTCTTCAGGGATGCTCCTCA 58.801 55.000 2.79 0.00 36.57 3.86
394 395 1.198713 TGTCTTCAGGGATGCTCCTC 58.801 55.000 2.79 0.00 36.57 3.71
395 396 1.489649 CATGTCTTCAGGGATGCTCCT 59.510 52.381 2.79 0.00 36.57 3.69
396 397 1.964552 CATGTCTTCAGGGATGCTCC 58.035 55.000 0.00 0.00 35.23 4.70
403 404 1.186200 TCGTCTCCATGTCTTCAGGG 58.814 55.000 0.00 0.00 45.64 4.45
404 405 3.257393 CTTTCGTCTCCATGTCTTCAGG 58.743 50.000 0.00 0.00 0.00 3.86
405 406 3.677121 CACTTTCGTCTCCATGTCTTCAG 59.323 47.826 0.00 0.00 0.00 3.02
406 407 3.554960 CCACTTTCGTCTCCATGTCTTCA 60.555 47.826 0.00 0.00 0.00 3.02
407 408 2.996621 CCACTTTCGTCTCCATGTCTTC 59.003 50.000 0.00 0.00 0.00 2.87
408 409 2.632996 TCCACTTTCGTCTCCATGTCTT 59.367 45.455 0.00 0.00 0.00 3.01
409 410 2.232452 CTCCACTTTCGTCTCCATGTCT 59.768 50.000 0.00 0.00 0.00 3.41
410 411 2.611518 CTCCACTTTCGTCTCCATGTC 58.388 52.381 0.00 0.00 0.00 3.06
411 412 1.338200 GCTCCACTTTCGTCTCCATGT 60.338 52.381 0.00 0.00 0.00 3.21
412 413 1.338105 TGCTCCACTTTCGTCTCCATG 60.338 52.381 0.00 0.00 0.00 3.66
413 414 0.976641 TGCTCCACTTTCGTCTCCAT 59.023 50.000 0.00 0.00 0.00 3.41
414 415 0.976641 ATGCTCCACTTTCGTCTCCA 59.023 50.000 0.00 0.00 0.00 3.86
415 416 1.338200 ACATGCTCCACTTTCGTCTCC 60.338 52.381 0.00 0.00 0.00 3.71
416 417 2.086054 ACATGCTCCACTTTCGTCTC 57.914 50.000 0.00 0.00 0.00 3.36
417 418 2.037772 AGAACATGCTCCACTTTCGTCT 59.962 45.455 0.00 0.00 0.00 4.18
418 419 2.413453 GAGAACATGCTCCACTTTCGTC 59.587 50.000 0.00 0.00 0.00 4.20
419 420 2.224281 TGAGAACATGCTCCACTTTCGT 60.224 45.455 0.00 0.00 33.95 3.85
420 421 2.416747 TGAGAACATGCTCCACTTTCG 58.583 47.619 0.00 0.00 33.95 3.46
421 422 5.382618 AATTGAGAACATGCTCCACTTTC 57.617 39.130 0.00 0.00 33.95 2.62
422 423 5.302568 TGAAATTGAGAACATGCTCCACTTT 59.697 36.000 0.00 0.00 33.95 2.66
423 424 4.828939 TGAAATTGAGAACATGCTCCACTT 59.171 37.500 0.00 0.00 33.95 3.16
424 425 4.401022 TGAAATTGAGAACATGCTCCACT 58.599 39.130 0.00 0.00 33.95 4.00
425 426 4.217118 ACTGAAATTGAGAACATGCTCCAC 59.783 41.667 0.00 0.00 33.95 4.02
426 427 4.216902 CACTGAAATTGAGAACATGCTCCA 59.783 41.667 0.00 0.00 33.95 3.86
427 428 4.380233 CCACTGAAATTGAGAACATGCTCC 60.380 45.833 0.00 0.00 33.95 4.70
428 429 4.217118 ACCACTGAAATTGAGAACATGCTC 59.783 41.667 0.00 0.00 35.46 4.26
429 430 4.147321 ACCACTGAAATTGAGAACATGCT 58.853 39.130 0.00 0.00 0.00 3.79
430 431 4.510038 ACCACTGAAATTGAGAACATGC 57.490 40.909 0.00 0.00 0.00 4.06
431 432 6.075762 TGAACCACTGAAATTGAGAACATG 57.924 37.500 0.00 0.00 0.00 3.21
432 433 6.713762 TTGAACCACTGAAATTGAGAACAT 57.286 33.333 0.00 0.00 0.00 2.71
433 434 6.320926 TGATTGAACCACTGAAATTGAGAACA 59.679 34.615 0.00 0.00 0.00 3.18
434 435 6.738114 TGATTGAACCACTGAAATTGAGAAC 58.262 36.000 0.00 0.00 0.00 3.01
435 436 6.957920 TGATTGAACCACTGAAATTGAGAA 57.042 33.333 0.00 0.00 0.00 2.87
436 437 6.547141 ACTTGATTGAACCACTGAAATTGAGA 59.453 34.615 0.00 0.00 0.00 3.27
437 438 6.639686 CACTTGATTGAACCACTGAAATTGAG 59.360 38.462 0.00 0.00 0.00 3.02
438 439 6.320926 TCACTTGATTGAACCACTGAAATTGA 59.679 34.615 0.00 0.00 0.00 2.57
439 440 6.506147 TCACTTGATTGAACCACTGAAATTG 58.494 36.000 0.00 0.00 0.00 2.32
440 441 6.713762 TCACTTGATTGAACCACTGAAATT 57.286 33.333 0.00 0.00 0.00 1.82
441 442 5.278660 GCTCACTTGATTGAACCACTGAAAT 60.279 40.000 0.00 0.00 0.00 2.17
442 443 4.036734 GCTCACTTGATTGAACCACTGAAA 59.963 41.667 0.00 0.00 0.00 2.69
443 444 3.565482 GCTCACTTGATTGAACCACTGAA 59.435 43.478 0.00 0.00 0.00 3.02
444 445 3.141398 GCTCACTTGATTGAACCACTGA 58.859 45.455 0.00 0.00 0.00 3.41
445 446 2.096069 CGCTCACTTGATTGAACCACTG 60.096 50.000 0.00 0.00 0.00 3.66
446 447 2.146342 CGCTCACTTGATTGAACCACT 58.854 47.619 0.00 0.00 0.00 4.00
447 448 1.197721 CCGCTCACTTGATTGAACCAC 59.802 52.381 0.00 0.00 0.00 4.16
448 449 1.071542 TCCGCTCACTTGATTGAACCA 59.928 47.619 0.00 0.00 0.00 3.67
449 450 1.808411 TCCGCTCACTTGATTGAACC 58.192 50.000 0.00 0.00 0.00 3.62
450 451 3.896648 TTTCCGCTCACTTGATTGAAC 57.103 42.857 0.00 0.00 0.00 3.18
451 452 4.261572 CCTTTTTCCGCTCACTTGATTGAA 60.262 41.667 0.00 0.00 0.00 2.69
452 453 3.253188 CCTTTTTCCGCTCACTTGATTGA 59.747 43.478 0.00 0.00 0.00 2.57
453 454 3.253188 TCCTTTTTCCGCTCACTTGATTG 59.747 43.478 0.00 0.00 0.00 2.67
454 455 3.486383 TCCTTTTTCCGCTCACTTGATT 58.514 40.909 0.00 0.00 0.00 2.57
455 456 3.140325 TCCTTTTTCCGCTCACTTGAT 57.860 42.857 0.00 0.00 0.00 2.57
456 457 2.616842 GTTCCTTTTTCCGCTCACTTGA 59.383 45.455 0.00 0.00 0.00 3.02
457 458 2.357637 TGTTCCTTTTTCCGCTCACTTG 59.642 45.455 0.00 0.00 0.00 3.16
458 459 2.650322 TGTTCCTTTTTCCGCTCACTT 58.350 42.857 0.00 0.00 0.00 3.16
459 460 2.341846 TGTTCCTTTTTCCGCTCACT 57.658 45.000 0.00 0.00 0.00 3.41
460 461 3.500680 TGTATGTTCCTTTTTCCGCTCAC 59.499 43.478 0.00 0.00 0.00 3.51
461 462 3.500680 GTGTATGTTCCTTTTTCCGCTCA 59.499 43.478 0.00 0.00 0.00 4.26
462 463 3.119955 GGTGTATGTTCCTTTTTCCGCTC 60.120 47.826 0.00 0.00 0.00 5.03
463 464 2.817844 GGTGTATGTTCCTTTTTCCGCT 59.182 45.455 0.00 0.00 0.00 5.52
464 465 2.094906 GGGTGTATGTTCCTTTTTCCGC 60.095 50.000 0.00 0.00 0.00 5.54
465 466 3.418047 AGGGTGTATGTTCCTTTTTCCG 58.582 45.455 0.00 0.00 0.00 4.30
466 467 4.403734 TGAGGGTGTATGTTCCTTTTTCC 58.596 43.478 0.00 0.00 0.00 3.13
467 468 5.768164 TCTTGAGGGTGTATGTTCCTTTTTC 59.232 40.000 0.00 0.00 0.00 2.29
468 469 5.701224 TCTTGAGGGTGTATGTTCCTTTTT 58.299 37.500 0.00 0.00 0.00 1.94
469 470 5.319043 TCTTGAGGGTGTATGTTCCTTTT 57.681 39.130 0.00 0.00 0.00 2.27
470 471 4.993705 TCTTGAGGGTGTATGTTCCTTT 57.006 40.909 0.00 0.00 0.00 3.11
471 472 4.383118 CGATCTTGAGGGTGTATGTTCCTT 60.383 45.833 0.00 0.00 0.00 3.36
472 473 3.133003 CGATCTTGAGGGTGTATGTTCCT 59.867 47.826 0.00 0.00 0.00 3.36
473 474 3.118738 ACGATCTTGAGGGTGTATGTTCC 60.119 47.826 0.00 0.00 0.00 3.62
474 475 3.865745 CACGATCTTGAGGGTGTATGTTC 59.134 47.826 0.00 0.00 0.00 3.18
475 476 3.513912 TCACGATCTTGAGGGTGTATGTT 59.486 43.478 0.00 0.00 0.00 2.71
476 477 3.096852 TCACGATCTTGAGGGTGTATGT 58.903 45.455 0.00 0.00 0.00 2.29
477 478 3.801114 TCACGATCTTGAGGGTGTATG 57.199 47.619 0.00 0.00 0.00 2.39
478 479 5.359194 AAATCACGATCTTGAGGGTGTAT 57.641 39.130 8.01 0.00 0.00 2.29
479 480 4.819105 AAATCACGATCTTGAGGGTGTA 57.181 40.909 8.01 0.00 0.00 2.90
480 481 3.703001 AAATCACGATCTTGAGGGTGT 57.297 42.857 8.01 0.00 0.00 4.16
481 482 4.256920 AGAAAATCACGATCTTGAGGGTG 58.743 43.478 8.01 0.00 0.00 4.61
482 483 4.559862 AGAAAATCACGATCTTGAGGGT 57.440 40.909 8.01 0.00 0.00 4.34
483 484 5.886960 AAAGAAAATCACGATCTTGAGGG 57.113 39.130 8.01 0.00 33.86 4.30
484 485 6.955963 CGTAAAAGAAAATCACGATCTTGAGG 59.044 38.462 8.01 0.00 33.86 3.86
485 486 7.510630 ACGTAAAAGAAAATCACGATCTTGAG 58.489 34.615 8.01 0.00 33.86 3.02
486 487 7.416154 ACGTAAAAGAAAATCACGATCTTGA 57.584 32.000 4.15 4.15 33.86 3.02
487 488 8.488979 AAACGTAAAAGAAAATCACGATCTTG 57.511 30.769 0.00 0.00 33.86 3.02
488 489 8.339714 TGAAACGTAAAAGAAAATCACGATCTT 58.660 29.630 0.00 0.00 36.51 2.40
489 490 7.857569 TGAAACGTAAAAGAAAATCACGATCT 58.142 30.769 0.00 0.00 36.51 2.75
490 491 8.483743 TTGAAACGTAAAAGAAAATCACGATC 57.516 30.769 0.00 0.00 36.51 3.69
491 492 9.458374 AATTGAAACGTAAAAGAAAATCACGAT 57.542 25.926 0.00 0.00 36.51 3.73
492 493 8.844441 AATTGAAACGTAAAAGAAAATCACGA 57.156 26.923 0.00 0.00 36.51 4.35
498 499 9.522804 AGTGCATAATTGAAACGTAAAAGAAAA 57.477 25.926 0.00 0.00 0.00 2.29
499 500 9.176181 GAGTGCATAATTGAAACGTAAAAGAAA 57.824 29.630 0.00 0.00 0.00 2.52
500 501 8.346300 TGAGTGCATAATTGAAACGTAAAAGAA 58.654 29.630 0.00 0.00 0.00 2.52
501 502 7.866729 TGAGTGCATAATTGAAACGTAAAAGA 58.133 30.769 0.00 0.00 0.00 2.52
502 503 8.015087 TCTGAGTGCATAATTGAAACGTAAAAG 58.985 33.333 0.00 0.00 0.00 2.27
503 504 7.866729 TCTGAGTGCATAATTGAAACGTAAAA 58.133 30.769 0.00 0.00 0.00 1.52
504 505 7.428282 TCTGAGTGCATAATTGAAACGTAAA 57.572 32.000 0.00 0.00 0.00 2.01
505 506 7.428282 TTCTGAGTGCATAATTGAAACGTAA 57.572 32.000 0.00 0.00 0.00 3.18
506 507 7.549134 AGATTCTGAGTGCATAATTGAAACGTA 59.451 33.333 0.00 0.00 0.00 3.57
507 508 5.940192 TTCTGAGTGCATAATTGAAACGT 57.060 34.783 0.00 0.00 0.00 3.99
508 509 6.779117 AGATTCTGAGTGCATAATTGAAACG 58.221 36.000 0.00 0.00 0.00 3.60
509 510 8.887717 AGTAGATTCTGAGTGCATAATTGAAAC 58.112 33.333 0.00 0.00 0.00 2.78
517 518 9.746457 AGTGATATAGTAGATTCTGAGTGCATA 57.254 33.333 0.00 0.00 0.00 3.14
518 519 8.648698 AGTGATATAGTAGATTCTGAGTGCAT 57.351 34.615 0.00 0.00 0.00 3.96
519 520 9.574516 TTAGTGATATAGTAGATTCTGAGTGCA 57.425 33.333 0.00 0.00 0.00 4.57
524 525 9.456147 GGAGCTTAGTGATATAGTAGATTCTGA 57.544 37.037 0.00 0.00 0.00 3.27
525 526 8.682710 GGGAGCTTAGTGATATAGTAGATTCTG 58.317 40.741 0.00 0.00 0.00 3.02
526 527 8.620177 AGGGAGCTTAGTGATATAGTAGATTCT 58.380 37.037 0.00 0.00 0.00 2.40
585 586 3.173668 GGAACCCAGTGAAAAACCAAC 57.826 47.619 0.00 0.00 0.00 3.77
615 616 8.281212 AGAGCTTATTAAAAATCGTTGACCAT 57.719 30.769 0.00 0.00 0.00 3.55
643 644 3.680490 TGTTGAACACCTCACTTGAACA 58.320 40.909 0.00 0.00 32.21 3.18
1763 2578 1.411246 TCGGCGTTGATGTTATAGGCT 59.589 47.619 6.85 0.00 0.00 4.58
1934 2749 3.996621 ATGCCCCCACCCACCTTG 61.997 66.667 0.00 0.00 0.00 3.61
2136 2951 4.622260 AAACCATCCAACCCAAAGAATG 57.378 40.909 0.00 0.00 0.00 2.67
2137 2952 4.746395 GCAAAACCATCCAACCCAAAGAAT 60.746 41.667 0.00 0.00 0.00 2.40
2141 2956 1.839994 TGCAAAACCATCCAACCCAAA 59.160 42.857 0.00 0.00 0.00 3.28
2156 2971 5.798125 TTAACACAAATGAGGGATGCAAA 57.202 34.783 0.00 0.00 0.00 3.68
2210 3026 3.375782 AAAGCTGCAATCTTTCACCAC 57.624 42.857 1.02 0.00 0.00 4.16
2290 3126 1.336887 GCCAGCGAGTAGTTTCAGACA 60.337 52.381 0.00 0.00 0.00 3.41
2354 3190 4.872124 TCAATGAGGATTCTTCATCGTGTG 59.128 41.667 11.26 6.76 35.42 3.82
2371 3207 7.707464 TCGTTTCTGTAACTGTAAAGTCAATGA 59.293 33.333 0.00 0.00 34.46 2.57
2382 3218 6.370718 ACTCTGTTTTTCGTTTCTGTAACTGT 59.629 34.615 0.00 0.00 34.46 3.55
2406 3242 9.141400 TGTTGTAAAGGTATTGTTTGTTTTGAC 57.859 29.630 0.00 0.00 0.00 3.18
2441 3277 3.091633 ACTGGGCTGTAATCATTTGCT 57.908 42.857 0.00 0.00 0.00 3.91
2667 3524 0.313987 GGACTTGGTTTGAAAGGCCG 59.686 55.000 0.00 0.00 42.88 6.13
2880 3923 0.319641 ACCCTCAAAGCGACGAAGAC 60.320 55.000 0.00 0.00 0.00 3.01
2886 3929 0.034896 TCTTCCACCCTCAAAGCGAC 59.965 55.000 0.00 0.00 0.00 5.19
2967 4010 4.437239 CTGTAGTGCTTAAGTGGATCCTG 58.563 47.826 14.23 0.00 0.00 3.86
2986 4029 4.711949 CTCTTGCGGCCCTGCTGT 62.712 66.667 0.00 0.00 37.24 4.40
2997 4040 7.689446 AGTTAATAGAAAGGGAAACTCTTGC 57.311 36.000 0.00 0.00 0.00 4.01
3101 4144 9.853555 TGTGTACTCTTGCCAAATTATTAATTG 57.146 29.630 2.48 0.00 0.00 2.32
3179 4232 5.984725 TGTTTGTTTCCTAGAAGAGTGTCA 58.015 37.500 0.00 0.00 0.00 3.58
3180 4233 8.779354 ATATGTTTGTTTCCTAGAAGAGTGTC 57.221 34.615 0.00 0.00 0.00 3.67
3193 4246 8.335356 ACAGCGTCACATATATATGTTTGTTTC 58.665 33.333 23.03 11.70 43.99 2.78
3203 4256 6.367695 GCATAAACCACAGCGTCACATATATA 59.632 38.462 0.00 0.00 0.00 0.86
3219 4278 4.339748 TCAGCTATGTTTGGCATAAACCA 58.660 39.130 11.73 0.00 39.36 3.67
3235 4294 9.642327 TTACACTAAAACGTTTATGATCAGCTA 57.358 29.630 15.03 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.