Multiple sequence alignment - TraesCS6D01G228400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G228400 chr6D 100.000 3766 0 0 1 3766 319354922 319351157 0.000000e+00 6955
1 TraesCS6D01G228400 chr6D 97.911 383 8 0 1791 2173 408942832 408943214 0.000000e+00 664
2 TraesCS6D01G228400 chr6D 91.733 375 29 2 1797 2171 419731813 419732185 1.550000e-143 520
3 TraesCS6D01G228400 chr6D 91.733 375 27 2 1796 2170 470898281 470898651 5.580000e-143 518
4 TraesCS6D01G228400 chr6A 94.137 1552 62 9 2168 3693 457319577 457318029 0.000000e+00 2335
5 TraesCS6D01G228400 chr6A 91.038 703 30 8 1073 1766 457336191 457335513 0.000000e+00 918
6 TraesCS6D01G228400 chr6A 84.760 584 56 17 284 860 457356499 457355942 4.250000e-154 555
7 TraesCS6D01G228400 chr6A 91.304 207 8 4 887 1085 457351433 457351229 1.330000e-69 274
8 TraesCS6D01G228400 chr6A 100.000 73 0 0 3680 3752 457315138 457315066 6.560000e-28 135
9 TraesCS6D01G228400 chr7D 100.000 373 0 0 1798 2170 126710091 126710463 0.000000e+00 689
10 TraesCS6D01G228400 chr7D 91.733 375 29 1 1796 2170 626566532 626566160 1.550000e-143 520
11 TraesCS6D01G228400 chr1D 98.922 371 4 0 1798 2168 425567673 425567303 0.000000e+00 664
12 TraesCS6D01G228400 chr2B 93.261 371 22 2 1798 2168 690718188 690718555 9.200000e-151 544
13 TraesCS6D01G228400 chr2B 84.404 109 16 1 3130 3238 201268835 201268728 5.140000e-19 106
14 TraesCS6D01G228400 chr7A 92.204 372 26 2 1798 2168 14461080 14460711 1.200000e-144 523
15 TraesCS6D01G228400 chr5D 91.935 372 28 1 1798 2169 13633876 13633507 1.550000e-143 520
16 TraesCS6D01G228400 chr6B 94.650 243 12 1 2704 2945 503896504 503896746 3.550000e-100 375
17 TraesCS6D01G228400 chr6B 84.362 243 22 12 34 273 503894586 503894815 1.360000e-54 224
18 TraesCS6D01G228400 chr6B 85.398 226 20 9 34 257 503895293 503895507 4.900000e-54 222
19 TraesCS6D01G228400 chr2D 83.486 109 17 1 3130 3238 143265610 143265503 2.390000e-17 100


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G228400 chr6D 319351157 319354922 3765 True 6955.000000 6955 100.000000 1 3766 1 chr6D.!!$R1 3765
1 TraesCS6D01G228400 chr6A 457315066 457319577 4511 True 1235.000000 2335 97.068500 2168 3752 2 chr6A.!!$R4 1584
2 TraesCS6D01G228400 chr6A 457335513 457336191 678 True 918.000000 918 91.038000 1073 1766 1 chr6A.!!$R1 693
3 TraesCS6D01G228400 chr6A 457355942 457356499 557 True 555.000000 555 84.760000 284 860 1 chr6A.!!$R3 576
4 TraesCS6D01G228400 chr6B 503894586 503896746 2160 False 273.666667 375 88.136667 34 2945 3 chr6B.!!$F1 2911

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
903 1670 0.032130 GCGCGAGATCAGGATTGGTA 59.968 55.0 12.10 0.0 0.00 3.25 F
1066 1833 0.179094 TACAAGCAAGGATACGGCGG 60.179 55.0 13.24 0.0 44.93 6.13 F
1857 2629 0.025384 GTTACCGCGTATTTCCGTGC 59.975 55.0 4.92 0.0 37.03 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1838 2610 0.025384 GCACGGAAATACGCGGTAAC 59.975 55.0 12.47 0.0 37.37 2.50 R
2127 2899 0.033503 AGGCAATTTTACCGAGGGGG 60.034 55.0 0.00 0.0 43.62 5.40 R
3613 4409 0.188342 AAAAGCCAGGGGTCATGTGT 59.812 50.0 0.00 0.0 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.652300 CCAAAAACTAATTTTCCCAAGCTAC 57.348 36.000 0.00 0.00 39.20 3.58
25 26 6.364976 CCAAAAACTAATTTTCCCAAGCTACG 59.635 38.462 0.00 0.00 39.20 3.51
26 27 6.887626 AAAACTAATTTTCCCAAGCTACGA 57.112 33.333 0.00 0.00 32.29 3.43
27 28 5.874895 AACTAATTTTCCCAAGCTACGAC 57.125 39.130 0.00 0.00 0.00 4.34
28 29 5.161943 ACTAATTTTCCCAAGCTACGACT 57.838 39.130 0.00 0.00 0.00 4.18
29 30 5.557866 ACTAATTTTCCCAAGCTACGACTT 58.442 37.500 0.00 0.00 0.00 3.01
30 31 6.002082 ACTAATTTTCCCAAGCTACGACTTT 58.998 36.000 0.00 0.00 0.00 2.66
31 32 5.784578 AATTTTCCCAAGCTACGACTTTT 57.215 34.783 0.00 0.00 0.00 2.27
32 33 5.784578 ATTTTCCCAAGCTACGACTTTTT 57.215 34.783 0.00 0.00 0.00 1.94
47 48 6.512297 ACGACTTTTTCCATGCTACAAAAAT 58.488 32.000 0.00 0.00 30.61 1.82
50 752 9.139174 CGACTTTTTCCATGCTACAAAAATAAT 57.861 29.630 0.00 0.00 30.61 1.28
97 799 6.824553 TGTCCATGTTCCATCAAAATGAAAA 58.175 32.000 0.00 0.00 34.61 2.29
99 801 7.937942 TGTCCATGTTCCATCAAAATGAAAATT 59.062 29.630 0.00 0.00 34.61 1.82
101 803 9.001542 TCCATGTTCCATCAAAATGAAAATTTC 57.998 29.630 0.00 0.00 34.61 2.17
147 849 5.528320 CCATGGTCCATGAAATAAAATTGCC 59.472 40.000 30.14 0.00 43.81 4.52
148 850 5.752036 TGGTCCATGAAATAAAATTGCCA 57.248 34.783 0.00 0.00 0.00 4.92
149 851 5.486526 TGGTCCATGAAATAAAATTGCCAC 58.513 37.500 0.00 0.00 0.00 5.01
160 862 4.809815 AAAATTGCCACGGTCAAATTTG 57.190 36.364 12.15 12.15 28.70 2.32
161 863 1.794512 ATTGCCACGGTCAAATTTGC 58.205 45.000 13.54 8.47 0.00 3.68
183 885 5.299782 TGCTTTTACCGTGGTCAACTAAAAT 59.700 36.000 0.00 0.00 0.00 1.82
186 888 7.308169 GCTTTTACCGTGGTCAACTAAAATAGT 60.308 37.037 0.00 0.00 41.73 2.12
212 914 6.695278 TGCCAGCGTCTATAAAATAAATTTGC 59.305 34.615 0.00 0.00 32.27 3.68
295 1043 7.957992 TTTCCTTTTGTAAAACTAGGGTTCA 57.042 32.000 0.00 0.00 34.14 3.18
310 1058 2.084546 GGTTCAAACCTGAATCTCCCG 58.915 52.381 4.63 0.00 45.75 5.14
326 1074 0.819666 CCCGAATGGAGGCTTAAGGC 60.820 60.000 20.84 20.84 37.49 4.35
362 1110 5.640732 GGTGAACTATTGTGTTTGCATAGG 58.359 41.667 0.00 0.00 0.00 2.57
391 1139 2.232941 TCTCGCCGGTTTTCTGTTCTAT 59.767 45.455 1.90 0.00 0.00 1.98
393 1141 1.323534 CGCCGGTTTTCTGTTCTATCG 59.676 52.381 1.90 0.00 0.00 2.92
413 1164 4.806330 TCGAACGAGTTTTAGAGCTGATT 58.194 39.130 0.00 0.00 0.00 2.57
414 1165 4.621460 TCGAACGAGTTTTAGAGCTGATTG 59.379 41.667 0.00 0.00 0.00 2.67
433 1184 0.519077 GGTTTCCTCTTCGCTGCTTG 59.481 55.000 0.00 0.00 0.00 4.01
437 1188 0.671781 TCCTCTTCGCTGCTTGAAGC 60.672 55.000 10.84 10.84 42.02 3.86
449 1200 2.158827 TGCTTGAAGCTCTGTGTGGTTA 60.159 45.455 18.94 0.00 42.97 2.85
468 1219 5.282126 GGTTAATCCAACGGCATCTAGCAT 61.282 45.833 0.00 0.00 39.67 3.79
480 1231 1.474330 TCTAGCATGTTCAGGCGAGA 58.526 50.000 15.54 15.54 39.04 4.04
482 1233 3.222603 TCTAGCATGTTCAGGCGAGATA 58.777 45.455 15.54 0.00 36.95 1.98
491 1242 4.083324 TGTTCAGGCGAGATAAGCAAAAAG 60.083 41.667 0.00 0.00 36.08 2.27
592 1348 2.094026 TCCACATCCTCATCTTCGTGTG 60.094 50.000 0.00 0.00 37.34 3.82
616 1372 1.832998 CCCTGCATACTTTTTGCCCAT 59.167 47.619 0.00 0.00 39.39 4.00
630 1386 0.179056 GCCCATACGCACCACACTAT 60.179 55.000 0.00 0.00 0.00 2.12
631 1387 1.069513 GCCCATACGCACCACACTATA 59.930 52.381 0.00 0.00 0.00 1.31
648 1404 5.715753 ACACTATAACTCTCTTTCCGAACCT 59.284 40.000 0.00 0.00 0.00 3.50
697 1453 6.377327 AACATATCGAACAATTGGTCCATC 57.623 37.500 17.76 3.14 0.00 3.51
704 1460 4.320202 CGAACAATTGGTCCATCGAAACTT 60.320 41.667 17.76 0.00 32.38 2.66
713 1469 6.234920 TGGTCCATCGAAACTTGAAGAAATA 58.765 36.000 0.00 0.00 0.00 1.40
714 1470 6.712998 TGGTCCATCGAAACTTGAAGAAATAA 59.287 34.615 0.00 0.00 0.00 1.40
715 1471 7.021790 GGTCCATCGAAACTTGAAGAAATAAC 58.978 38.462 0.00 0.00 0.00 1.89
716 1472 6.736853 GTCCATCGAAACTTGAAGAAATAACG 59.263 38.462 0.00 0.00 0.00 3.18
717 1473 6.425721 TCCATCGAAACTTGAAGAAATAACGT 59.574 34.615 0.00 0.00 0.00 3.99
853 1620 1.480137 AGGAGTAGCAGCAGTAGCAAG 59.520 52.381 0.00 0.00 45.49 4.01
860 1627 1.932156 GCAGCAGTAGCAAGCAAAACC 60.932 52.381 0.00 0.00 45.49 3.27
861 1628 1.610522 CAGCAGTAGCAAGCAAAACCT 59.389 47.619 0.00 0.00 45.49 3.50
862 1629 1.610522 AGCAGTAGCAAGCAAAACCTG 59.389 47.619 0.00 0.00 45.49 4.00
881 1648 2.083774 TGCTTGTTTCTAATGGGCGAG 58.916 47.619 0.00 0.00 0.00 5.03
882 1649 2.290008 TGCTTGTTTCTAATGGGCGAGA 60.290 45.455 0.00 0.00 0.00 4.04
883 1650 2.352960 GCTTGTTTCTAATGGGCGAGAG 59.647 50.000 0.00 0.00 0.00 3.20
884 1651 2.691409 TGTTTCTAATGGGCGAGAGG 57.309 50.000 0.00 0.00 0.00 3.69
895 1662 2.051435 CGAGAGGCGCGAGATCAG 60.051 66.667 12.10 0.00 0.00 2.90
897 1664 2.124109 AGAGGCGCGAGATCAGGA 60.124 61.111 12.10 0.00 0.00 3.86
899 1666 1.112315 AGAGGCGCGAGATCAGGATT 61.112 55.000 12.10 0.00 0.00 3.01
900 1667 0.943359 GAGGCGCGAGATCAGGATTG 60.943 60.000 12.10 0.00 0.00 2.67
901 1668 1.958205 GGCGCGAGATCAGGATTGG 60.958 63.158 12.10 0.00 0.00 3.16
902 1669 1.227380 GCGCGAGATCAGGATTGGT 60.227 57.895 12.10 0.00 0.00 3.67
903 1670 0.032130 GCGCGAGATCAGGATTGGTA 59.968 55.000 12.10 0.00 0.00 3.25
904 1671 1.337260 GCGCGAGATCAGGATTGGTAT 60.337 52.381 12.10 0.00 0.00 2.73
905 1672 2.600731 CGCGAGATCAGGATTGGTATC 58.399 52.381 0.00 0.00 0.00 2.24
912 1679 3.330275 GGATTGGTATCCGCACGC 58.670 61.111 0.00 0.00 40.98 5.34
913 1680 1.522806 GGATTGGTATCCGCACGCA 60.523 57.895 0.00 0.00 40.98 5.24
914 1681 1.092921 GGATTGGTATCCGCACGCAA 61.093 55.000 0.00 0.00 40.98 4.85
915 1682 0.730265 GATTGGTATCCGCACGCAAA 59.270 50.000 0.00 0.00 0.00 3.68
916 1683 0.450184 ATTGGTATCCGCACGCAAAC 59.550 50.000 0.00 0.00 0.00 2.93
917 1684 0.604243 TTGGTATCCGCACGCAAACT 60.604 50.000 0.00 0.00 0.00 2.66
918 1685 1.295357 TGGTATCCGCACGCAAACTG 61.295 55.000 0.00 0.00 0.00 3.16
919 1686 1.296056 GGTATCCGCACGCAAACTGT 61.296 55.000 0.00 0.00 0.00 3.55
920 1687 1.352114 GTATCCGCACGCAAACTGTA 58.648 50.000 0.00 0.00 0.00 2.74
921 1688 1.727880 GTATCCGCACGCAAACTGTAA 59.272 47.619 0.00 0.00 0.00 2.41
922 1689 1.231221 ATCCGCACGCAAACTGTAAA 58.769 45.000 0.00 0.00 0.00 2.01
923 1690 0.305313 TCCGCACGCAAACTGTAAAC 59.695 50.000 0.00 0.00 0.00 2.01
924 1691 0.659123 CCGCACGCAAACTGTAAACC 60.659 55.000 0.00 0.00 0.00 3.27
925 1692 0.659123 CGCACGCAAACTGTAAACCC 60.659 55.000 0.00 0.00 0.00 4.11
926 1693 0.666374 GCACGCAAACTGTAAACCCT 59.334 50.000 0.00 0.00 0.00 4.34
927 1694 1.874872 GCACGCAAACTGTAAACCCTA 59.125 47.619 0.00 0.00 0.00 3.53
928 1695 2.291190 GCACGCAAACTGTAAACCCTAA 59.709 45.455 0.00 0.00 0.00 2.69
929 1696 3.608474 GCACGCAAACTGTAAACCCTAAG 60.608 47.826 0.00 0.00 0.00 2.18
930 1697 3.058501 CACGCAAACTGTAAACCCTAAGG 60.059 47.826 0.00 0.00 40.04 2.69
943 1710 3.967332 CCCTAAGGTTTCCTCACGTAA 57.033 47.619 0.00 0.00 30.89 3.18
944 1711 4.276058 CCCTAAGGTTTCCTCACGTAAA 57.724 45.455 0.00 0.00 30.89 2.01
945 1712 4.644498 CCCTAAGGTTTCCTCACGTAAAA 58.356 43.478 0.00 0.00 30.89 1.52
946 1713 5.065235 CCCTAAGGTTTCCTCACGTAAAAA 58.935 41.667 0.00 0.00 30.89 1.94
980 1747 2.946564 GTTGGAAACTATGCAAGGTGC 58.053 47.619 0.00 0.00 45.32 5.01
981 1748 2.668279 GTTGGAAACTATGCAAGGTGCG 60.668 50.000 0.00 0.00 45.35 5.34
982 1749 5.155332 GTTGGAAACTATGCAAGGTGCGT 62.155 47.826 0.00 0.01 45.35 5.24
983 1750 5.861571 GTTGGAAACTATGCAAGGTGCGTA 61.862 45.833 0.00 2.41 45.35 4.42
984 1751 7.808937 GTTGGAAACTATGCAAGGTGCGTAC 62.809 48.000 0.00 0.00 45.35 3.67
996 1763 3.454371 GGTGCGTACCATAGTGAGATT 57.546 47.619 18.66 0.00 46.71 2.40
997 1764 3.123804 GGTGCGTACCATAGTGAGATTG 58.876 50.000 18.66 0.00 46.71 2.67
998 1765 3.181479 GGTGCGTACCATAGTGAGATTGA 60.181 47.826 18.66 0.00 46.71 2.57
999 1766 4.045104 GTGCGTACCATAGTGAGATTGAG 58.955 47.826 0.00 0.00 0.00 3.02
1000 1767 3.951680 TGCGTACCATAGTGAGATTGAGA 59.048 43.478 0.00 0.00 0.00 3.27
1001 1768 4.584743 TGCGTACCATAGTGAGATTGAGAT 59.415 41.667 0.00 0.00 0.00 2.75
1002 1769 4.920340 GCGTACCATAGTGAGATTGAGATG 59.080 45.833 0.00 0.00 0.00 2.90
1003 1770 5.465051 CGTACCATAGTGAGATTGAGATGG 58.535 45.833 0.00 0.00 39.80 3.51
1004 1771 5.241728 CGTACCATAGTGAGATTGAGATGGA 59.758 44.000 5.74 0.00 37.78 3.41
1005 1772 6.071672 CGTACCATAGTGAGATTGAGATGGAT 60.072 42.308 5.74 0.00 37.78 3.41
1006 1773 6.760440 ACCATAGTGAGATTGAGATGGATT 57.240 37.500 5.74 0.00 37.78 3.01
1007 1774 6.767456 ACCATAGTGAGATTGAGATGGATTC 58.233 40.000 5.74 0.00 37.78 2.52
1008 1775 6.171921 CCATAGTGAGATTGAGATGGATTCC 58.828 44.000 0.00 0.00 36.71 3.01
1009 1776 6.239800 CCATAGTGAGATTGAGATGGATTCCA 60.240 42.308 8.08 8.08 36.71 3.53
1010 1777 5.705397 AGTGAGATTGAGATGGATTCCAA 57.295 39.130 9.98 0.00 36.95 3.53
1011 1778 5.682659 AGTGAGATTGAGATGGATTCCAAG 58.317 41.667 9.98 0.00 36.95 3.61
1012 1779 5.427806 AGTGAGATTGAGATGGATTCCAAGA 59.572 40.000 9.98 0.00 36.95 3.02
1013 1780 6.069789 AGTGAGATTGAGATGGATTCCAAGAA 60.070 38.462 9.98 0.85 36.95 2.52
1014 1781 6.260493 GTGAGATTGAGATGGATTCCAAGAAG 59.740 42.308 9.98 0.00 36.95 2.85
1015 1782 5.692928 AGATTGAGATGGATTCCAAGAAGG 58.307 41.667 9.98 0.00 36.95 3.46
1016 1783 3.939740 TGAGATGGATTCCAAGAAGGG 57.060 47.619 9.98 0.00 36.95 3.95
1017 1784 3.192944 TGAGATGGATTCCAAGAAGGGT 58.807 45.455 9.98 0.00 36.95 4.34
1018 1785 4.370776 TGAGATGGATTCCAAGAAGGGTA 58.629 43.478 9.98 0.00 36.95 3.69
1019 1786 4.410228 TGAGATGGATTCCAAGAAGGGTAG 59.590 45.833 9.98 0.00 36.95 3.18
1020 1787 3.718956 AGATGGATTCCAAGAAGGGTAGG 59.281 47.826 9.98 0.00 36.95 3.18
1021 1788 2.929301 TGGATTCCAAGAAGGGTAGGT 58.071 47.619 1.94 0.00 38.24 3.08
1022 1789 2.844348 TGGATTCCAAGAAGGGTAGGTC 59.156 50.000 1.94 0.00 38.24 3.85
1026 1793 0.824759 CCAAGAAGGGTAGGTCCGAG 59.175 60.000 0.00 0.00 37.00 4.63
1034 1801 1.333177 GGTAGGTCCGAGATGCAGAT 58.667 55.000 0.00 0.00 0.00 2.90
1035 1802 1.000283 GGTAGGTCCGAGATGCAGATG 60.000 57.143 0.00 0.00 0.00 2.90
1038 1805 0.683973 GGTCCGAGATGCAGATGGAT 59.316 55.000 0.00 0.00 0.00 3.41
1040 1807 2.353208 GGTCCGAGATGCAGATGGATAC 60.353 54.545 0.00 0.00 0.00 2.24
1053 1820 0.837272 TGGATACAGGGGCTACAAGC 59.163 55.000 0.00 0.00 46.17 4.01
1055 1822 1.211949 GGATACAGGGGCTACAAGCAA 59.788 52.381 0.78 0.00 44.75 3.91
1056 1823 2.565841 GATACAGGGGCTACAAGCAAG 58.434 52.381 0.78 0.00 44.75 4.01
1057 1824 0.618458 TACAGGGGCTACAAGCAAGG 59.382 55.000 0.78 0.00 44.75 3.61
1058 1825 1.133809 ACAGGGGCTACAAGCAAGGA 61.134 55.000 0.78 0.00 44.75 3.36
1059 1826 0.257039 CAGGGGCTACAAGCAAGGAT 59.743 55.000 0.78 0.00 44.75 3.24
1060 1827 1.490490 CAGGGGCTACAAGCAAGGATA 59.510 52.381 0.78 0.00 44.75 2.59
1061 1828 1.490910 AGGGGCTACAAGCAAGGATAC 59.509 52.381 0.78 0.00 44.75 2.24
1062 1829 1.583054 GGGCTACAAGCAAGGATACG 58.417 55.000 0.78 0.00 44.75 3.06
1064 1831 0.938008 GCTACAAGCAAGGATACGGC 59.062 55.000 0.00 0.00 41.89 5.68
1066 1833 0.179094 TACAAGCAAGGATACGGCGG 60.179 55.000 13.24 0.00 44.93 6.13
1068 1835 3.031417 AAGCAAGGATACGGCGGCT 62.031 57.895 13.24 5.13 44.93 5.52
1069 1836 3.272334 GCAAGGATACGGCGGCTG 61.272 66.667 13.24 7.39 46.39 4.85
1070 1837 2.588877 CAAGGATACGGCGGCTGG 60.589 66.667 13.24 1.76 46.39 4.85
1099 1866 4.451435 GGAAGACGAAGAAAAAGGTACCTG 59.549 45.833 17.14 2.27 0.00 4.00
1101 1868 2.140717 ACGAAGAAAAAGGTACCTGCG 58.859 47.619 17.14 12.64 34.07 5.18
1102 1869 2.224113 ACGAAGAAAAAGGTACCTGCGA 60.224 45.455 17.14 0.00 32.35 5.10
1106 1873 1.197036 GAAAAAGGTACCTGCGACTGC 59.803 52.381 17.14 0.00 43.20 4.40
1122 1889 2.100991 GCGATGGCAAAGAAGGCG 59.899 61.111 0.00 0.00 39.62 5.52
1250 2017 1.535462 CAACGAACTGTGGATGGGAAC 59.465 52.381 0.00 0.00 0.00 3.62
1261 2028 2.275089 TGGGAACATGGGGCGATG 59.725 61.111 0.00 0.00 33.40 3.84
1292 2059 2.159572 CCATGGACCGAAAAAGTAAGCG 60.160 50.000 5.56 0.00 0.00 4.68
1293 2060 2.529780 TGGACCGAAAAAGTAAGCGA 57.470 45.000 0.00 0.00 0.00 4.93
1324 2091 6.393720 ACAAATTGCATGCGTTTCTTAATC 57.606 33.333 14.09 0.00 0.00 1.75
1371 2138 8.865420 TGGACATATTAGAAGCTACTACTAGG 57.135 38.462 0.00 0.00 0.00 3.02
1372 2139 8.666821 TGGACATATTAGAAGCTACTACTAGGA 58.333 37.037 0.00 0.00 0.00 2.94
1373 2140 9.517868 GGACATATTAGAAGCTACTACTAGGAA 57.482 37.037 0.00 0.00 0.00 3.36
1435 2202 8.917415 ATCTCATATGCATAACTACGTACATG 57.083 34.615 11.13 1.45 0.00 3.21
1449 2216 1.325640 GTACATGTGATGCAGCGACTG 59.674 52.381 9.11 0.00 34.12 3.51
1451 2218 0.372679 CATGTGATGCAGCGACTGTC 59.627 55.000 0.00 0.00 33.43 3.51
1514 2281 1.730902 CAGCCTCGTCGACACTGTG 60.731 63.158 17.16 6.19 0.00 3.66
1536 2303 4.002316 GCAGCTCTTTGAAGTCAGAATCT 58.998 43.478 0.00 0.00 0.00 2.40
1556 2323 1.494721 TCAACAAAAGAGGCCTCAGGT 59.505 47.619 33.90 21.58 0.00 4.00
1639 2406 3.245990 CGCAATATCATCTTTGAGCGTGA 59.754 43.478 0.00 0.00 37.77 4.35
1643 2410 6.195983 GCAATATCATCTTTGAGCGTGAAAAG 59.804 38.462 0.00 0.00 34.73 2.27
1647 2414 4.154737 TCATCTTTGAGCGTGAAAAGGATG 59.845 41.667 0.00 0.00 34.75 3.51
1708 2475 2.252714 GCTAGCTAGCCCCTTGTCTAT 58.747 52.381 31.67 0.00 43.39 1.98
1710 2477 3.193903 GCTAGCTAGCCCCTTGTCTATAC 59.806 52.174 31.67 2.16 43.39 1.47
1711 2478 3.621682 AGCTAGCCCCTTGTCTATACT 57.378 47.619 12.13 0.00 0.00 2.12
1714 2481 3.804063 GCTAGCCCCTTGTCTATACTTGC 60.804 52.174 2.29 0.00 0.00 4.01
1718 2485 3.433598 GCCCCTTGTCTATACTTGCATGA 60.434 47.826 6.60 0.00 0.00 3.07
1720 2487 4.999950 CCCCTTGTCTATACTTGCATGATC 59.000 45.833 6.60 0.00 0.00 2.92
1766 2538 8.979534 AGCTAAGCCTTACACTAGTATTTACTT 58.020 33.333 0.00 0.00 37.73 2.24
1767 2539 9.032420 GCTAAGCCTTACACTAGTATTTACTTG 57.968 37.037 0.00 0.00 37.73 3.16
1797 2569 2.776312 CATTGCATGCAGTCTCCATC 57.224 50.000 21.50 0.00 0.00 3.51
1798 2570 2.021457 CATTGCATGCAGTCTCCATCA 58.979 47.619 21.50 2.55 0.00 3.07
1799 2571 2.203470 TTGCATGCAGTCTCCATCAA 57.797 45.000 21.50 0.00 0.00 2.57
1800 2572 1.746470 TGCATGCAGTCTCCATCAAG 58.254 50.000 18.46 0.00 0.00 3.02
1801 2573 1.022735 GCATGCAGTCTCCATCAAGG 58.977 55.000 14.21 0.00 39.47 3.61
1802 2574 1.681166 GCATGCAGTCTCCATCAAGGT 60.681 52.381 14.21 0.00 39.02 3.50
1803 2575 2.719739 CATGCAGTCTCCATCAAGGTT 58.280 47.619 0.00 0.00 39.02 3.50
1804 2576 2.957402 TGCAGTCTCCATCAAGGTTT 57.043 45.000 0.00 0.00 39.02 3.27
1805 2577 3.228188 TGCAGTCTCCATCAAGGTTTT 57.772 42.857 0.00 0.00 39.02 2.43
1806 2578 2.886523 TGCAGTCTCCATCAAGGTTTTG 59.113 45.455 0.00 0.00 39.02 2.44
1807 2579 2.229784 GCAGTCTCCATCAAGGTTTTGG 59.770 50.000 0.00 0.00 39.02 3.28
1808 2580 3.490348 CAGTCTCCATCAAGGTTTTGGT 58.510 45.455 0.00 0.00 39.02 3.67
1809 2581 3.891366 CAGTCTCCATCAAGGTTTTGGTT 59.109 43.478 0.00 0.00 39.02 3.67
1810 2582 5.070001 CAGTCTCCATCAAGGTTTTGGTTA 58.930 41.667 0.00 0.00 39.02 2.85
1811 2583 5.048713 CAGTCTCCATCAAGGTTTTGGTTAC 60.049 44.000 0.00 0.00 39.02 2.50
1812 2584 4.217767 GTCTCCATCAAGGTTTTGGTTACC 59.782 45.833 0.00 0.00 39.02 2.85
1813 2585 3.150767 TCCATCAAGGTTTTGGTTACCG 58.849 45.455 0.00 0.00 40.69 4.02
1814 2586 2.230266 CCATCAAGGTTTTGGTTACCGG 59.770 50.000 0.00 0.00 40.69 5.28
1815 2587 2.732844 TCAAGGTTTTGGTTACCGGT 57.267 45.000 13.98 13.98 40.69 5.28
1816 2588 2.574450 TCAAGGTTTTGGTTACCGGTC 58.426 47.619 12.40 0.00 40.69 4.79
1817 2589 1.264826 CAAGGTTTTGGTTACCGGTCG 59.735 52.381 12.40 0.00 40.69 4.79
1818 2590 0.758123 AGGTTTTGGTTACCGGTCGA 59.242 50.000 12.40 0.00 40.69 4.20
1819 2591 1.140652 AGGTTTTGGTTACCGGTCGAA 59.859 47.619 12.40 0.00 40.69 3.71
1820 2592 1.946081 GGTTTTGGTTACCGGTCGAAA 59.054 47.619 12.40 6.74 0.00 3.46
1821 2593 2.553602 GGTTTTGGTTACCGGTCGAAAT 59.446 45.455 12.40 0.00 0.00 2.17
1822 2594 3.004629 GGTTTTGGTTACCGGTCGAAATT 59.995 43.478 12.40 0.00 0.00 1.82
1823 2595 4.499526 GGTTTTGGTTACCGGTCGAAATTT 60.500 41.667 12.40 0.00 0.00 1.82
1824 2596 4.486574 TTTGGTTACCGGTCGAAATTTC 57.513 40.909 12.40 8.20 0.00 2.17
1839 2611 5.582689 GAAATTTCGAGATTTCCCATGGT 57.417 39.130 23.99 0.00 39.16 3.55
1840 2612 5.965922 GAAATTTCGAGATTTCCCATGGTT 58.034 37.500 23.99 0.00 39.16 3.67
1841 2613 7.095695 GAAATTTCGAGATTTCCCATGGTTA 57.904 36.000 23.99 0.00 39.16 2.85
1842 2614 6.451064 AATTTCGAGATTTCCCATGGTTAC 57.549 37.500 11.73 0.00 0.00 2.50
1843 2615 3.553828 TCGAGATTTCCCATGGTTACC 57.446 47.619 11.73 0.00 0.00 2.85
1844 2616 2.159014 TCGAGATTTCCCATGGTTACCG 60.159 50.000 11.73 5.01 0.00 4.02
1845 2617 1.947456 GAGATTTCCCATGGTTACCGC 59.053 52.381 11.73 0.00 0.00 5.68
1846 2618 0.661020 GATTTCCCATGGTTACCGCG 59.339 55.000 11.73 0.00 0.00 6.46
1847 2619 0.034863 ATTTCCCATGGTTACCGCGT 60.035 50.000 11.73 0.00 0.00 6.01
1848 2620 0.612229 TTTCCCATGGTTACCGCGTA 59.388 50.000 11.73 0.00 0.00 4.42
1849 2621 0.831966 TTCCCATGGTTACCGCGTAT 59.168 50.000 11.73 0.00 0.00 3.06
1850 2622 0.831966 TCCCATGGTTACCGCGTATT 59.168 50.000 11.73 0.00 0.00 1.89
1851 2623 1.209990 TCCCATGGTTACCGCGTATTT 59.790 47.619 11.73 0.00 0.00 1.40
1852 2624 1.600485 CCCATGGTTACCGCGTATTTC 59.400 52.381 11.73 0.00 0.00 2.17
1853 2625 1.600485 CCATGGTTACCGCGTATTTCC 59.400 52.381 4.92 1.35 0.00 3.13
1854 2626 1.259507 CATGGTTACCGCGTATTTCCG 59.740 52.381 4.92 0.00 0.00 4.30
1855 2627 0.246086 TGGTTACCGCGTATTTCCGT 59.754 50.000 4.92 0.00 0.00 4.69
1856 2628 0.646895 GGTTACCGCGTATTTCCGTG 59.353 55.000 4.92 0.00 38.04 4.94
1857 2629 0.025384 GTTACCGCGTATTTCCGTGC 59.975 55.000 4.92 0.00 37.03 5.34
1858 2630 1.083242 TTACCGCGTATTTCCGTGCC 61.083 55.000 4.92 0.00 37.03 5.01
1859 2631 2.904470 TACCGCGTATTTCCGTGCCC 62.904 60.000 4.92 0.00 37.03 5.36
1860 2632 3.569690 CGCGTATTTCCGTGCCCC 61.570 66.667 0.00 0.00 0.00 5.80
1861 2633 2.124860 GCGTATTTCCGTGCCCCT 60.125 61.111 0.00 0.00 0.00 4.79
1862 2634 2.178235 GCGTATTTCCGTGCCCCTC 61.178 63.158 0.00 0.00 0.00 4.30
1863 2635 1.881252 CGTATTTCCGTGCCCCTCG 60.881 63.158 0.00 0.00 0.00 4.63
1865 2637 1.991167 TATTTCCGTGCCCCTCGGT 60.991 57.895 4.36 0.00 46.86 4.69
1866 2638 0.687098 TATTTCCGTGCCCCTCGGTA 60.687 55.000 4.36 0.00 46.86 4.02
1867 2639 1.555477 ATTTCCGTGCCCCTCGGTAA 61.555 55.000 4.36 1.98 46.86 2.85
1868 2640 1.766625 TTTCCGTGCCCCTCGGTAAA 61.767 55.000 4.36 2.21 46.86 2.01
1869 2641 1.555477 TTCCGTGCCCCTCGGTAAAT 61.555 55.000 4.36 0.00 46.86 1.40
1870 2642 1.523032 CCGTGCCCCTCGGTAAATC 60.523 63.158 0.00 0.00 42.62 2.17
1871 2643 1.523032 CGTGCCCCTCGGTAAATCC 60.523 63.158 0.00 0.00 0.00 3.01
1872 2644 1.153025 GTGCCCCTCGGTAAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
1873 2645 2.380285 TGCCCCTCGGTAAATCCCC 61.380 63.158 0.00 0.00 0.00 4.81
1874 2646 2.380285 GCCCCTCGGTAAATCCCCA 61.380 63.158 0.00 0.00 0.00 4.96
1875 2647 1.716028 GCCCCTCGGTAAATCCCCAT 61.716 60.000 0.00 0.00 0.00 4.00
1876 2648 1.737199 CCCCTCGGTAAATCCCCATA 58.263 55.000 0.00 0.00 0.00 2.74
1877 2649 1.350019 CCCCTCGGTAAATCCCCATAC 59.650 57.143 0.00 0.00 0.00 2.39
1878 2650 1.350019 CCCTCGGTAAATCCCCATACC 59.650 57.143 0.00 0.00 38.55 2.73
1882 2654 2.180432 GGTAAATCCCCATACCGAGC 57.820 55.000 0.00 0.00 32.84 5.03
1883 2655 1.418637 GGTAAATCCCCATACCGAGCA 59.581 52.381 0.00 0.00 32.84 4.26
1884 2656 2.158726 GGTAAATCCCCATACCGAGCAA 60.159 50.000 0.00 0.00 32.84 3.91
1885 2657 2.818751 AAATCCCCATACCGAGCAAA 57.181 45.000 0.00 0.00 0.00 3.68
1886 2658 2.818751 AATCCCCATACCGAGCAAAA 57.181 45.000 0.00 0.00 0.00 2.44
1887 2659 2.818751 ATCCCCATACCGAGCAAAAA 57.181 45.000 0.00 0.00 0.00 1.94
1952 2724 9.764363 TTTATAGTAAAGTACATGCAGGATCTG 57.236 33.333 4.84 0.00 34.12 2.90
1953 2725 5.939764 AGTAAAGTACATGCAGGATCTGA 57.060 39.130 4.84 0.00 32.44 3.27
1954 2726 6.491714 AGTAAAGTACATGCAGGATCTGAT 57.508 37.500 4.84 0.00 32.44 2.90
1955 2727 6.893583 AGTAAAGTACATGCAGGATCTGATT 58.106 36.000 4.84 0.00 32.44 2.57
1956 2728 8.023021 AGTAAAGTACATGCAGGATCTGATTA 57.977 34.615 4.84 0.00 32.44 1.75
1957 2729 8.486210 AGTAAAGTACATGCAGGATCTGATTAA 58.514 33.333 4.84 0.00 32.44 1.40
1958 2730 9.277783 GTAAAGTACATGCAGGATCTGATTAAT 57.722 33.333 4.84 0.00 32.44 1.40
1959 2731 7.741027 AAGTACATGCAGGATCTGATTAATG 57.259 36.000 4.84 0.00 32.44 1.90
1960 2732 5.704515 AGTACATGCAGGATCTGATTAATGC 59.295 40.000 4.84 12.81 32.44 3.56
1961 2733 3.825014 ACATGCAGGATCTGATTAATGCC 59.175 43.478 4.84 3.12 32.44 4.40
1962 2734 3.581265 TGCAGGATCTGATTAATGCCA 57.419 42.857 15.49 5.88 32.44 4.92
1963 2735 4.108501 TGCAGGATCTGATTAATGCCAT 57.891 40.909 15.49 0.00 32.44 4.40
1964 2736 3.824443 TGCAGGATCTGATTAATGCCATG 59.176 43.478 15.49 0.00 32.44 3.66
1965 2737 4.077108 GCAGGATCTGATTAATGCCATGA 58.923 43.478 0.00 0.00 32.44 3.07
1966 2738 4.156190 GCAGGATCTGATTAATGCCATGAG 59.844 45.833 0.00 0.00 32.44 2.90
1967 2739 5.557866 CAGGATCTGATTAATGCCATGAGA 58.442 41.667 0.00 0.00 32.44 3.27
1968 2740 5.644206 CAGGATCTGATTAATGCCATGAGAG 59.356 44.000 0.00 0.00 32.44 3.20
1969 2741 5.310068 AGGATCTGATTAATGCCATGAGAGT 59.690 40.000 0.00 0.00 0.00 3.24
1970 2742 6.002704 GGATCTGATTAATGCCATGAGAGTT 58.997 40.000 0.00 0.00 0.00 3.01
1971 2743 6.072618 GGATCTGATTAATGCCATGAGAGTTG 60.073 42.308 0.00 0.00 0.00 3.16
1972 2744 5.128205 TCTGATTAATGCCATGAGAGTTGG 58.872 41.667 0.00 0.00 37.31 3.77
1973 2745 4.858850 TGATTAATGCCATGAGAGTTGGT 58.141 39.130 0.00 0.00 36.57 3.67
1974 2746 5.263599 TGATTAATGCCATGAGAGTTGGTT 58.736 37.500 0.00 0.00 36.57 3.67
1975 2747 5.357878 TGATTAATGCCATGAGAGTTGGTTC 59.642 40.000 0.00 0.00 36.57 3.62
1976 2748 3.446442 AATGCCATGAGAGTTGGTTCT 57.554 42.857 0.00 0.00 36.57 3.01
1977 2749 2.479566 TGCCATGAGAGTTGGTTCTC 57.520 50.000 0.00 0.00 43.14 2.87
1984 2756 4.422073 TGAGAGTTGGTTCTCATGTGTT 57.578 40.909 1.79 0.00 46.42 3.32
1985 2757 4.129380 TGAGAGTTGGTTCTCATGTGTTG 58.871 43.478 1.79 0.00 46.42 3.33
1986 2758 3.480470 AGAGTTGGTTCTCATGTGTTGG 58.520 45.455 0.00 0.00 36.97 3.77
1987 2759 3.117888 AGAGTTGGTTCTCATGTGTTGGT 60.118 43.478 0.00 0.00 36.97 3.67
1988 2760 4.102524 AGAGTTGGTTCTCATGTGTTGGTA 59.897 41.667 0.00 0.00 36.97 3.25
1989 2761 4.389374 AGTTGGTTCTCATGTGTTGGTAG 58.611 43.478 0.00 0.00 0.00 3.18
1990 2762 2.778299 TGGTTCTCATGTGTTGGTAGC 58.222 47.619 0.00 0.00 0.00 3.58
1991 2763 2.105649 TGGTTCTCATGTGTTGGTAGCA 59.894 45.455 0.00 0.00 0.00 3.49
1992 2764 3.146066 GGTTCTCATGTGTTGGTAGCAA 58.854 45.455 2.54 2.54 0.00 3.91
1993 2765 3.058224 GGTTCTCATGTGTTGGTAGCAAC 60.058 47.826 26.90 26.90 35.75 4.17
1994 2766 2.778299 TCTCATGTGTTGGTAGCAACC 58.222 47.619 29.46 21.76 46.98 3.77
1995 2767 2.371841 TCTCATGTGTTGGTAGCAACCT 59.628 45.455 29.46 14.92 46.91 3.50
1996 2768 3.580895 TCTCATGTGTTGGTAGCAACCTA 59.419 43.478 29.46 20.32 46.91 3.08
1997 2769 3.935203 CTCATGTGTTGGTAGCAACCTAG 59.065 47.826 29.46 18.50 46.91 3.02
1998 2770 3.326588 TCATGTGTTGGTAGCAACCTAGT 59.673 43.478 29.46 13.78 46.91 2.57
1999 2771 3.849563 TGTGTTGGTAGCAACCTAGTT 57.150 42.857 29.46 0.00 46.91 2.24
2000 2772 4.159244 TGTGTTGGTAGCAACCTAGTTT 57.841 40.909 29.46 0.00 46.91 2.66
2001 2773 4.528920 TGTGTTGGTAGCAACCTAGTTTT 58.471 39.130 29.46 0.00 46.91 2.43
2002 2774 4.951094 TGTGTTGGTAGCAACCTAGTTTTT 59.049 37.500 29.46 0.00 46.91 1.94
2003 2775 5.163602 TGTGTTGGTAGCAACCTAGTTTTTG 60.164 40.000 29.46 0.00 46.91 2.44
2004 2776 4.951094 TGTTGGTAGCAACCTAGTTTTTGT 59.049 37.500 29.46 0.00 46.91 2.83
2005 2777 5.419471 TGTTGGTAGCAACCTAGTTTTTGTT 59.581 36.000 29.46 0.00 46.91 2.83
2006 2778 6.071278 TGTTGGTAGCAACCTAGTTTTTGTTT 60.071 34.615 29.46 0.00 46.91 2.83
2007 2779 6.532988 TGGTAGCAACCTAGTTTTTGTTTT 57.467 33.333 0.00 0.00 46.91 2.43
2008 2780 6.334202 TGGTAGCAACCTAGTTTTTGTTTTG 58.666 36.000 0.00 0.00 46.91 2.44
2009 2781 5.751509 GGTAGCAACCTAGTTTTTGTTTTGG 59.248 40.000 0.00 0.00 43.08 3.28
2010 2782 4.765273 AGCAACCTAGTTTTTGTTTTGGG 58.235 39.130 0.00 0.00 0.00 4.12
2011 2783 4.468153 AGCAACCTAGTTTTTGTTTTGGGA 59.532 37.500 0.00 0.00 0.00 4.37
2012 2784 4.808895 GCAACCTAGTTTTTGTTTTGGGAG 59.191 41.667 0.00 0.00 0.00 4.30
2013 2785 5.356426 CAACCTAGTTTTTGTTTTGGGAGG 58.644 41.667 0.00 0.00 0.00 4.30
2014 2786 4.616553 ACCTAGTTTTTGTTTTGGGAGGT 58.383 39.130 0.00 0.00 0.00 3.85
2015 2787 4.647853 ACCTAGTTTTTGTTTTGGGAGGTC 59.352 41.667 0.00 0.00 28.54 3.85
2016 2788 4.893524 CCTAGTTTTTGTTTTGGGAGGTCT 59.106 41.667 0.00 0.00 0.00 3.85
2017 2789 5.009710 CCTAGTTTTTGTTTTGGGAGGTCTC 59.990 44.000 0.00 0.00 0.00 3.36
2018 2790 4.610333 AGTTTTTGTTTTGGGAGGTCTCT 58.390 39.130 0.00 0.00 0.00 3.10
2019 2791 4.402474 AGTTTTTGTTTTGGGAGGTCTCTG 59.598 41.667 0.00 0.00 0.00 3.35
2020 2792 2.656947 TTGTTTTGGGAGGTCTCTGG 57.343 50.000 0.00 0.00 0.00 3.86
2021 2793 1.518367 TGTTTTGGGAGGTCTCTGGT 58.482 50.000 0.00 0.00 0.00 4.00
2022 2794 1.850345 TGTTTTGGGAGGTCTCTGGTT 59.150 47.619 0.00 0.00 0.00 3.67
2023 2795 2.158667 TGTTTTGGGAGGTCTCTGGTTC 60.159 50.000 0.00 0.00 0.00 3.62
2024 2796 0.685097 TTTGGGAGGTCTCTGGTTCG 59.315 55.000 0.00 0.00 0.00 3.95
2025 2797 0.178944 TTGGGAGGTCTCTGGTTCGA 60.179 55.000 0.00 0.00 0.00 3.71
2026 2798 0.178944 TGGGAGGTCTCTGGTTCGAA 60.179 55.000 0.00 0.00 0.00 3.71
2027 2799 1.196012 GGGAGGTCTCTGGTTCGAAT 58.804 55.000 0.00 0.00 0.00 3.34
2028 2800 1.134670 GGGAGGTCTCTGGTTCGAATG 60.135 57.143 0.00 0.00 0.00 2.67
2029 2801 1.550976 GGAGGTCTCTGGTTCGAATGT 59.449 52.381 0.00 0.00 0.00 2.71
2030 2802 2.028020 GGAGGTCTCTGGTTCGAATGTT 60.028 50.000 0.00 0.00 0.00 2.71
2031 2803 3.254892 GAGGTCTCTGGTTCGAATGTTC 58.745 50.000 0.00 0.00 0.00 3.18
2091 2863 6.657836 AATTTCGTTCGAAATATTCTCGGT 57.342 33.333 25.90 10.91 42.04 4.69
2092 2864 7.760131 AATTTCGTTCGAAATATTCTCGGTA 57.240 32.000 25.90 2.69 42.04 4.02
2093 2865 7.941795 ATTTCGTTCGAAATATTCTCGGTAT 57.058 32.000 24.92 4.38 41.37 2.73
2094 2866 7.760131 TTTCGTTCGAAATATTCTCGGTATT 57.240 32.000 14.89 0.00 36.93 1.89
2095 2867 7.760131 TTCGTTCGAAATATTCTCGGTATTT 57.240 32.000 0.00 0.00 36.93 1.40
2096 2868 7.385668 TCGTTCGAAATATTCTCGGTATTTC 57.614 36.000 0.00 8.01 41.66 2.17
2097 2869 7.198390 TCGTTCGAAATATTCTCGGTATTTCT 58.802 34.615 0.00 0.00 42.35 2.52
2098 2870 7.377928 TCGTTCGAAATATTCTCGGTATTTCTC 59.622 37.037 0.00 6.33 42.35 2.87
2099 2871 7.491683 GTTCGAAATATTCTCGGTATTTCTCG 58.508 38.462 0.00 6.03 42.35 4.04
2100 2872 6.147581 TCGAAATATTCTCGGTATTTCTCGG 58.852 40.000 15.30 3.07 42.35 4.63
2101 2873 5.919141 CGAAATATTCTCGGTATTTCTCGGT 59.081 40.000 13.53 0.00 42.35 4.69
2102 2874 7.041167 TCGAAATATTCTCGGTATTTCTCGGTA 60.041 37.037 15.30 0.00 42.35 4.02
2103 2875 7.592533 CGAAATATTCTCGGTATTTCTCGGTAA 59.407 37.037 13.53 0.00 42.35 2.85
2104 2876 8.585189 AAATATTCTCGGTATTTCTCGGTAAC 57.415 34.615 0.00 0.00 28.29 2.50
2105 2877 4.376340 TTCTCGGTATTTCTCGGTAACC 57.624 45.455 0.00 0.00 0.00 2.85
2129 2901 2.416747 GTAACCACGTTTACCAGTCCC 58.583 52.381 0.00 0.00 0.00 4.46
2130 2902 0.109153 AACCACGTTTACCAGTCCCC 59.891 55.000 0.00 0.00 0.00 4.81
2131 2903 1.002990 CCACGTTTACCAGTCCCCC 60.003 63.158 0.00 0.00 0.00 5.40
2132 2904 1.486145 CCACGTTTACCAGTCCCCCT 61.486 60.000 0.00 0.00 0.00 4.79
2133 2905 0.036671 CACGTTTACCAGTCCCCCTC 60.037 60.000 0.00 0.00 0.00 4.30
2134 2906 1.217244 CGTTTACCAGTCCCCCTCG 59.783 63.158 0.00 0.00 0.00 4.63
2135 2907 1.600638 GTTTACCAGTCCCCCTCGG 59.399 63.158 0.00 0.00 0.00 4.63
2136 2908 1.159184 TTTACCAGTCCCCCTCGGT 59.841 57.895 0.00 0.00 35.46 4.69
2137 2909 0.413037 TTTACCAGTCCCCCTCGGTA 59.587 55.000 0.00 0.00 32.81 4.02
2138 2910 0.413037 TTACCAGTCCCCCTCGGTAA 59.587 55.000 0.00 0.00 40.74 2.85
2139 2911 0.413037 TACCAGTCCCCCTCGGTAAA 59.587 55.000 0.00 0.00 31.10 2.01
2140 2912 0.474273 ACCAGTCCCCCTCGGTAAAA 60.474 55.000 0.00 0.00 0.00 1.52
2141 2913 0.916809 CCAGTCCCCCTCGGTAAAAT 59.083 55.000 0.00 0.00 0.00 1.82
2142 2914 1.283905 CCAGTCCCCCTCGGTAAAATT 59.716 52.381 0.00 0.00 0.00 1.82
2143 2915 2.365582 CAGTCCCCCTCGGTAAAATTG 58.634 52.381 0.00 0.00 0.00 2.32
2144 2916 1.100510 GTCCCCCTCGGTAAAATTGC 58.899 55.000 0.00 0.00 0.00 3.56
2145 2917 0.033894 TCCCCCTCGGTAAAATTGCC 60.034 55.000 0.00 0.00 0.00 4.52
2146 2918 0.033503 CCCCCTCGGTAAAATTGCCT 60.034 55.000 0.00 0.00 0.00 4.75
2147 2919 1.389555 CCCCTCGGTAAAATTGCCTC 58.610 55.000 0.00 0.00 0.00 4.70
2148 2920 1.340600 CCCCTCGGTAAAATTGCCTCA 60.341 52.381 0.00 0.00 0.00 3.86
2149 2921 2.654863 CCCTCGGTAAAATTGCCTCAT 58.345 47.619 0.00 0.00 0.00 2.90
2150 2922 3.023832 CCCTCGGTAAAATTGCCTCATT 58.976 45.455 0.00 0.00 0.00 2.57
2151 2923 3.066760 CCCTCGGTAAAATTGCCTCATTC 59.933 47.826 0.00 0.00 0.00 2.67
2152 2924 3.242739 CCTCGGTAAAATTGCCTCATTCG 60.243 47.826 0.00 0.00 0.00 3.34
2153 2925 2.680841 TCGGTAAAATTGCCTCATTCGG 59.319 45.455 0.00 0.00 0.00 4.30
2154 2926 2.422127 CGGTAAAATTGCCTCATTCGGT 59.578 45.455 0.00 0.00 0.00 4.69
2155 2927 3.623960 CGGTAAAATTGCCTCATTCGGTA 59.376 43.478 0.00 0.00 0.00 4.02
2156 2928 4.095185 CGGTAAAATTGCCTCATTCGGTAA 59.905 41.667 0.00 0.00 33.14 2.85
2157 2929 5.337554 GGTAAAATTGCCTCATTCGGTAAC 58.662 41.667 0.00 0.00 31.36 2.50
2158 2930 4.450082 AAAATTGCCTCATTCGGTAACC 57.550 40.909 0.00 0.00 31.36 2.85
2159 2931 2.799126 ATTGCCTCATTCGGTAACCA 57.201 45.000 0.00 0.00 31.36 3.67
2160 2932 2.570415 TTGCCTCATTCGGTAACCAA 57.430 45.000 0.00 0.00 0.00 3.67
2161 2933 2.570415 TGCCTCATTCGGTAACCAAA 57.430 45.000 0.00 0.00 0.00 3.28
2162 2934 2.865079 TGCCTCATTCGGTAACCAAAA 58.135 42.857 0.00 0.00 0.00 2.44
2163 2935 2.554893 TGCCTCATTCGGTAACCAAAAC 59.445 45.455 0.00 0.00 0.00 2.43
2164 2936 2.094906 GCCTCATTCGGTAACCAAAACC 60.095 50.000 0.00 0.00 0.00 3.27
2165 2937 3.418047 CCTCATTCGGTAACCAAAACCT 58.582 45.455 0.00 0.00 34.66 3.50
2166 2938 3.824443 CCTCATTCGGTAACCAAAACCTT 59.176 43.478 0.00 0.00 34.66 3.50
2267 3039 1.203441 TGAGTGGAGCTGGGCAATCT 61.203 55.000 0.00 0.00 0.00 2.40
2294 3066 8.700676 GAGGATCAAGAGCTAATCTACGTAGCT 61.701 44.444 18.00 13.67 45.76 3.32
2300 3072 4.303086 GCTAATCTACGTAGCTTGTCCA 57.697 45.455 19.29 1.46 40.71 4.02
2465 3237 2.010497 GATGGTTTCCGAGGCTCTTTC 58.990 52.381 13.50 0.00 0.00 2.62
2523 3295 2.499693 TGGTTGCTTGAGATCGGTGATA 59.500 45.455 0.00 0.00 0.00 2.15
2528 3300 6.292919 GGTTGCTTGAGATCGGTGATAATAAC 60.293 42.308 0.00 0.00 0.00 1.89
2555 3327 0.656259 CTCTTGCTGATGATGGCACG 59.344 55.000 0.00 0.00 38.23 5.34
2592 3364 4.736168 GCCATGTTGTTTGTGCTGAACTTA 60.736 41.667 0.00 0.00 0.00 2.24
2596 3368 6.942886 TGTTGTTTGTGCTGAACTTAAAAG 57.057 33.333 0.00 0.00 0.00 2.27
2624 3396 6.031751 GAGTATCTGGAAGTTTCTGTCAGT 57.968 41.667 0.00 0.00 33.76 3.41
2672 3444 3.669536 TGATGACGGTCTGCATTTTACA 58.330 40.909 9.88 0.00 0.00 2.41
2799 3572 0.882042 CAGTGGTGTGTCTGGCAGTC 60.882 60.000 15.27 9.82 0.00 3.51
2813 3586 1.547372 GGCAGTCGACTGTTTACCCTA 59.453 52.381 38.11 0.00 45.45 3.53
2981 3773 2.572290 GTACAGGCAAGTCACTGGTTT 58.428 47.619 0.00 0.00 39.00 3.27
2989 3781 3.744660 CAAGTCACTGGTTTAGCTTCCT 58.255 45.455 0.00 0.00 0.00 3.36
3062 3854 7.413657 GCGATTTTATTAACAACCAGCACTCTA 60.414 37.037 0.00 0.00 0.00 2.43
3146 3938 2.959707 ACTGATACTCCCTTCGATCCAC 59.040 50.000 0.00 0.00 0.00 4.02
3176 3968 5.773575 TCTCGCTCAAATGGATGTATCTAC 58.226 41.667 0.00 0.00 0.00 2.59
3179 3971 4.449068 CGCTCAAATGGATGTATCTACCAC 59.551 45.833 0.00 0.00 36.49 4.16
3254 4046 9.981114 AAAAGGAGTAAATAAAAAGTCCACATG 57.019 29.630 0.00 0.00 37.63 3.21
3291 4083 4.933505 TTGCACATTCAAATTCCACTCA 57.066 36.364 0.00 0.00 0.00 3.41
3391 4186 7.435068 TTTAATTAGTTTGACTCACAGGAGC 57.565 36.000 0.00 0.00 45.42 4.70
3438 4233 3.627395 ATGACTAATTCGCCCACTGAA 57.373 42.857 0.00 0.00 0.00 3.02
3448 4244 0.673985 GCCCACTGAACCTGGAAAAC 59.326 55.000 0.00 0.00 0.00 2.43
3499 4295 3.550436 GCCTACCGAACTGACTACTATGC 60.550 52.174 0.00 0.00 0.00 3.14
3509 4305 7.376336 CGAACTGACTACTATGCTACATGTAAC 59.624 40.741 7.06 2.93 0.00 2.50
3513 4309 2.739292 ACTATGCTACATGTAACCGCG 58.261 47.619 7.06 0.00 0.00 6.46
3519 4315 1.260561 CTACATGTAACCGCGCATTCC 59.739 52.381 8.75 0.00 0.00 3.01
3523 4319 0.885150 TGTAACCGCGCATTCCAACA 60.885 50.000 8.75 0.23 0.00 3.33
3613 4409 2.202690 CGGACAGGCGCGATAACA 60.203 61.111 12.10 0.00 0.00 2.41
3661 4459 0.904865 ACCATCCGAGAGCCTTCACA 60.905 55.000 0.00 0.00 0.00 3.58
3677 4475 2.039418 TCACATATCTGGTTCTCCGGG 58.961 52.381 0.00 0.00 40.36 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.364976 CGTAGCTTGGGAAAATTAGTTTTTGG 59.635 38.462 0.00 0.00 37.65 3.28
1 2 7.114388 GTCGTAGCTTGGGAAAATTAGTTTTTG 59.886 37.037 0.00 0.00 37.65 2.44
2 3 7.013942 AGTCGTAGCTTGGGAAAATTAGTTTTT 59.986 33.333 0.00 0.00 40.25 1.94
3 4 6.489022 AGTCGTAGCTTGGGAAAATTAGTTTT 59.511 34.615 0.00 0.00 40.13 2.43
4 5 6.002082 AGTCGTAGCTTGGGAAAATTAGTTT 58.998 36.000 0.00 0.00 0.00 2.66
5 6 5.557866 AGTCGTAGCTTGGGAAAATTAGTT 58.442 37.500 0.00 0.00 0.00 2.24
6 7 5.161943 AGTCGTAGCTTGGGAAAATTAGT 57.838 39.130 0.00 0.00 0.00 2.24
7 8 6.496338 AAAGTCGTAGCTTGGGAAAATTAG 57.504 37.500 0.00 0.00 0.00 1.73
8 9 6.887626 AAAAGTCGTAGCTTGGGAAAATTA 57.112 33.333 0.00 0.00 0.00 1.40
9 10 5.784578 AAAAGTCGTAGCTTGGGAAAATT 57.215 34.783 0.00 0.00 0.00 1.82
10 11 5.278808 GGAAAAAGTCGTAGCTTGGGAAAAT 60.279 40.000 0.00 0.00 0.00 1.82
11 12 4.037089 GGAAAAAGTCGTAGCTTGGGAAAA 59.963 41.667 0.00 0.00 0.00 2.29
12 13 3.566742 GGAAAAAGTCGTAGCTTGGGAAA 59.433 43.478 0.00 0.00 0.00 3.13
13 14 3.143728 GGAAAAAGTCGTAGCTTGGGAA 58.856 45.455 0.00 0.00 0.00 3.97
14 15 2.105134 TGGAAAAAGTCGTAGCTTGGGA 59.895 45.455 0.00 0.00 0.00 4.37
15 16 2.500229 TGGAAAAAGTCGTAGCTTGGG 58.500 47.619 0.00 0.00 0.00 4.12
16 17 3.670627 GCATGGAAAAAGTCGTAGCTTGG 60.671 47.826 0.00 0.00 0.00 3.61
17 18 3.189287 AGCATGGAAAAAGTCGTAGCTTG 59.811 43.478 0.00 0.00 0.00 4.01
18 19 3.412386 AGCATGGAAAAAGTCGTAGCTT 58.588 40.909 0.00 0.00 0.00 3.74
19 20 3.059352 AGCATGGAAAAAGTCGTAGCT 57.941 42.857 0.00 0.00 0.00 3.32
20 21 3.682858 TGTAGCATGGAAAAAGTCGTAGC 59.317 43.478 0.00 0.00 0.00 3.58
21 22 5.856126 TTGTAGCATGGAAAAAGTCGTAG 57.144 39.130 0.00 0.00 0.00 3.51
22 23 6.621316 TTTTGTAGCATGGAAAAAGTCGTA 57.379 33.333 0.00 0.00 0.00 3.43
23 24 5.508200 TTTTGTAGCATGGAAAAAGTCGT 57.492 34.783 0.00 0.00 0.00 4.34
24 25 8.514136 TTATTTTTGTAGCATGGAAAAAGTCG 57.486 30.769 0.00 0.00 33.36 4.18
99 801 7.671819 TGGTAAATTTATTCTGTGGACCATGAA 59.328 33.333 13.07 13.07 29.67 2.57
101 803 7.403312 TGGTAAATTTATTCTGTGGACCATG 57.597 36.000 0.00 0.00 29.67 3.66
110 812 8.236585 TCATGGACCATGGTAAATTTATTCTG 57.763 34.615 29.97 4.58 41.66 3.02
139 841 3.003171 GCAAATTTGACCGTGGCAATTTT 59.997 39.130 22.31 6.55 32.31 1.82
147 849 4.965042 GGTAAAAGCAAATTTGACCGTG 57.035 40.909 22.31 0.00 41.67 4.94
160 862 4.816786 TTTAGTTGACCACGGTAAAAGC 57.183 40.909 0.00 0.00 0.00 3.51
161 863 8.091385 ACTATTTTAGTTGACCACGGTAAAAG 57.909 34.615 0.00 0.00 34.86 2.27
183 885 8.671384 ATTTATTTTATAGACGCTGGCAACTA 57.329 30.769 0.00 0.00 37.61 2.24
186 888 7.221838 GCAAATTTATTTTATAGACGCTGGCAA 59.778 33.333 0.00 0.00 0.00 4.52
261 985 8.919145 AGTTTTACAAAAGGAAATGTACATGGA 58.081 29.630 9.63 0.00 32.07 3.41
271 995 7.957992 TGAACCCTAGTTTTACAAAAGGAAA 57.042 32.000 0.00 0.00 35.94 3.13
274 998 6.982141 GGTTTGAACCCTAGTTTTACAAAAGG 59.018 38.462 1.32 0.00 43.43 3.11
295 1043 2.576191 TCCATTCGGGAGATTCAGGTTT 59.424 45.455 0.00 0.00 42.15 3.27
310 1058 0.464554 AGCGCCTTAAGCCTCCATTC 60.465 55.000 2.29 0.00 38.78 2.67
339 1087 5.414454 TCCTATGCAAACACAATAGTTCACC 59.586 40.000 0.00 0.00 0.00 4.02
391 1139 3.909776 TCAGCTCTAAAACTCGTTCGA 57.090 42.857 0.00 0.00 0.00 3.71
393 1141 4.691216 ACCAATCAGCTCTAAAACTCGTTC 59.309 41.667 0.00 0.00 0.00 3.95
413 1164 0.108585 AAGCAGCGAAGAGGAAACCA 59.891 50.000 0.00 0.00 0.00 3.67
414 1165 0.519077 CAAGCAGCGAAGAGGAAACC 59.481 55.000 0.00 0.00 0.00 3.27
433 1184 3.674997 TGGATTAACCACACAGAGCTTC 58.325 45.455 0.00 0.00 44.64 3.86
449 1200 2.224606 CATGCTAGATGCCGTTGGATT 58.775 47.619 0.00 0.00 42.00 3.01
468 1219 2.760634 TTGCTTATCTCGCCTGAACA 57.239 45.000 0.00 0.00 0.00 3.18
474 1225 2.917343 GTTGCTTTTTGCTTATCTCGCC 59.083 45.455 0.00 0.00 43.37 5.54
480 1231 4.568152 ACTGACGTTGCTTTTTGCTTAT 57.432 36.364 0.00 0.00 43.37 1.73
482 1233 2.939460 ACTGACGTTGCTTTTTGCTT 57.061 40.000 0.00 0.00 43.37 3.91
525 1280 0.253044 TTGGGCTAGAGGCATGTGAC 59.747 55.000 5.38 0.00 44.01 3.67
568 1324 1.759445 CGAAGATGAGGATGTGGACCT 59.241 52.381 0.00 0.00 40.80 3.85
592 1348 1.204704 GCAAAAAGTATGCAGGGTCCC 59.795 52.381 0.00 0.00 43.29 4.46
616 1372 4.267536 AGAGAGTTATAGTGTGGTGCGTA 58.732 43.478 0.00 0.00 0.00 4.42
630 1386 5.540400 TGAAAGGTTCGGAAAGAGAGTTA 57.460 39.130 0.00 0.00 0.00 2.24
631 1387 4.417426 TGAAAGGTTCGGAAAGAGAGTT 57.583 40.909 0.00 0.00 0.00 3.01
648 1404 7.451731 AAATAGAGGATGTGGACCTATGAAA 57.548 36.000 0.00 0.00 37.93 2.69
687 1443 4.651778 TCTTCAAGTTTCGATGGACCAAT 58.348 39.130 0.00 0.00 0.00 3.16
691 1447 6.736853 CGTTATTTCTTCAAGTTTCGATGGAC 59.263 38.462 0.00 0.00 0.00 4.02
693 1449 6.599437 ACGTTATTTCTTCAAGTTTCGATGG 58.401 36.000 0.00 0.00 0.00 3.51
694 1450 9.755064 ATAACGTTATTTCTTCAAGTTTCGATG 57.245 29.630 15.07 0.00 0.00 3.84
732 1488 7.849804 ATTTAGATCACGGCATTATATGGTC 57.150 36.000 0.00 0.00 0.00 4.02
833 1600 1.480137 CTTGCTACTGCTGCTACTCCT 59.520 52.381 0.00 0.00 40.48 3.69
860 1627 2.083774 TCGCCCATTAGAAACAAGCAG 58.916 47.619 0.00 0.00 0.00 4.24
861 1628 2.083774 CTCGCCCATTAGAAACAAGCA 58.916 47.619 0.00 0.00 0.00 3.91
862 1629 2.352960 CTCTCGCCCATTAGAAACAAGC 59.647 50.000 0.00 0.00 0.00 4.01
864 1631 2.939640 GCCTCTCGCCCATTAGAAACAA 60.940 50.000 0.00 0.00 0.00 2.83
865 1632 1.406887 GCCTCTCGCCCATTAGAAACA 60.407 52.381 0.00 0.00 0.00 2.83
866 1633 1.300481 GCCTCTCGCCCATTAGAAAC 58.700 55.000 0.00 0.00 0.00 2.78
867 1634 0.179084 CGCCTCTCGCCCATTAGAAA 60.179 55.000 0.00 0.00 0.00 2.52
869 1636 3.129300 CGCCTCTCGCCCATTAGA 58.871 61.111 0.00 0.00 0.00 2.10
881 1648 0.943359 CAATCCTGATCTCGCGCCTC 60.943 60.000 0.00 0.00 0.00 4.70
882 1649 1.068753 CAATCCTGATCTCGCGCCT 59.931 57.895 0.00 0.00 0.00 5.52
883 1650 1.958205 CCAATCCTGATCTCGCGCC 60.958 63.158 0.00 0.00 0.00 6.53
884 1651 0.032130 TACCAATCCTGATCTCGCGC 59.968 55.000 0.00 0.00 0.00 6.86
897 1664 0.450184 GTTTGCGTGCGGATACCAAT 59.550 50.000 0.00 0.00 0.00 3.16
899 1666 1.004320 AGTTTGCGTGCGGATACCA 60.004 52.632 3.56 0.00 0.00 3.25
900 1667 1.296056 ACAGTTTGCGTGCGGATACC 61.296 55.000 3.56 0.00 0.00 2.73
901 1668 1.352114 TACAGTTTGCGTGCGGATAC 58.648 50.000 0.00 0.00 0.00 2.24
902 1669 2.081725 TTACAGTTTGCGTGCGGATA 57.918 45.000 0.00 0.00 0.00 2.59
903 1670 1.069500 GTTTACAGTTTGCGTGCGGAT 60.069 47.619 0.00 0.00 0.00 4.18
904 1671 0.305313 GTTTACAGTTTGCGTGCGGA 59.695 50.000 0.00 0.00 0.00 5.54
905 1672 0.659123 GGTTTACAGTTTGCGTGCGG 60.659 55.000 0.00 0.00 0.00 5.69
906 1673 0.659123 GGGTTTACAGTTTGCGTGCG 60.659 55.000 0.00 0.00 0.00 5.34
907 1674 0.666374 AGGGTTTACAGTTTGCGTGC 59.334 50.000 0.00 0.00 0.00 5.34
908 1675 3.058501 CCTTAGGGTTTACAGTTTGCGTG 60.059 47.826 0.00 0.00 0.00 5.34
909 1676 3.143728 CCTTAGGGTTTACAGTTTGCGT 58.856 45.455 0.00 0.00 0.00 5.24
910 1677 3.143728 ACCTTAGGGTTTACAGTTTGCG 58.856 45.455 2.32 0.00 44.73 4.85
922 1689 4.102996 TTTTACGTGAGGAAACCTTAGGGT 59.897 41.667 2.32 0.00 45.22 4.34
923 1690 3.967332 TTACGTGAGGAAACCTTAGGG 57.033 47.619 2.32 0.00 31.76 3.53
943 1710 2.359975 CCCTCGCGGCCTCTTTTT 60.360 61.111 6.13 0.00 0.00 1.94
944 1711 3.192103 AACCCTCGCGGCCTCTTTT 62.192 57.895 6.13 0.00 33.26 2.27
945 1712 3.637273 AACCCTCGCGGCCTCTTT 61.637 61.111 6.13 0.00 33.26 2.52
946 1713 4.394712 CAACCCTCGCGGCCTCTT 62.395 66.667 6.13 0.00 33.26 2.85
951 1718 2.791501 TAGTTTCCAACCCTCGCGGC 62.792 60.000 6.13 0.00 33.26 6.53
952 1719 0.107848 ATAGTTTCCAACCCTCGCGG 60.108 55.000 6.13 0.00 37.81 6.46
953 1720 1.006832 CATAGTTTCCAACCCTCGCG 58.993 55.000 0.00 0.00 0.00 5.87
954 1721 0.733150 GCATAGTTTCCAACCCTCGC 59.267 55.000 0.00 0.00 0.00 5.03
955 1722 2.107950 TGCATAGTTTCCAACCCTCG 57.892 50.000 0.00 0.00 0.00 4.63
956 1723 2.755103 CCTTGCATAGTTTCCAACCCTC 59.245 50.000 0.00 0.00 0.00 4.30
957 1724 2.110011 ACCTTGCATAGTTTCCAACCCT 59.890 45.455 0.00 0.00 0.00 4.34
958 1725 2.231235 CACCTTGCATAGTTTCCAACCC 59.769 50.000 0.00 0.00 0.00 4.11
959 1726 2.352715 GCACCTTGCATAGTTTCCAACC 60.353 50.000 0.00 0.00 44.26 3.77
960 1727 2.668279 CGCACCTTGCATAGTTTCCAAC 60.668 50.000 0.00 0.00 45.36 3.77
961 1728 1.539388 CGCACCTTGCATAGTTTCCAA 59.461 47.619 0.00 0.00 45.36 3.53
962 1729 1.164411 CGCACCTTGCATAGTTTCCA 58.836 50.000 0.00 0.00 45.36 3.53
963 1730 1.165270 ACGCACCTTGCATAGTTTCC 58.835 50.000 0.00 0.00 45.36 3.13
964 1731 2.095372 GGTACGCACCTTGCATAGTTTC 59.905 50.000 0.00 0.00 45.36 2.78
965 1732 2.081462 GGTACGCACCTTGCATAGTTT 58.919 47.619 0.00 0.00 45.36 2.66
966 1733 1.002659 TGGTACGCACCTTGCATAGTT 59.997 47.619 6.34 0.00 45.36 2.24
967 1734 0.611200 TGGTACGCACCTTGCATAGT 59.389 50.000 6.34 0.00 45.36 2.12
968 1735 1.953559 ATGGTACGCACCTTGCATAG 58.046 50.000 6.34 0.00 45.36 2.23
969 1736 2.432874 ACTATGGTACGCACCTTGCATA 59.567 45.455 6.34 0.00 45.36 3.14
970 1737 1.209504 ACTATGGTACGCACCTTGCAT 59.790 47.619 6.34 0.00 45.36 3.96
971 1738 0.611200 ACTATGGTACGCACCTTGCA 59.389 50.000 6.34 0.00 45.36 4.08
972 1739 1.006832 CACTATGGTACGCACCTTGC 58.993 55.000 6.34 0.00 45.98 4.01
973 1740 2.165641 TCTCACTATGGTACGCACCTTG 59.834 50.000 6.34 0.00 45.98 3.61
974 1741 2.453521 TCTCACTATGGTACGCACCTT 58.546 47.619 6.34 2.08 45.98 3.50
975 1742 2.139323 TCTCACTATGGTACGCACCT 57.861 50.000 6.34 0.00 45.98 4.00
976 1743 3.123804 CAATCTCACTATGGTACGCACC 58.876 50.000 0.00 0.00 46.00 5.01
977 1744 4.041740 TCAATCTCACTATGGTACGCAC 57.958 45.455 0.00 0.00 0.00 5.34
978 1745 3.951680 TCTCAATCTCACTATGGTACGCA 59.048 43.478 0.00 0.00 0.00 5.24
979 1746 4.569761 TCTCAATCTCACTATGGTACGC 57.430 45.455 0.00 0.00 0.00 4.42
980 1747 5.241728 TCCATCTCAATCTCACTATGGTACG 59.758 44.000 0.00 0.00 36.19 3.67
981 1748 6.656632 TCCATCTCAATCTCACTATGGTAC 57.343 41.667 0.00 0.00 36.19 3.34
982 1749 7.038729 GGAATCCATCTCAATCTCACTATGGTA 60.039 40.741 0.00 0.00 36.19 3.25
983 1750 6.239829 GGAATCCATCTCAATCTCACTATGGT 60.240 42.308 0.00 0.00 36.19 3.55
984 1751 6.171921 GGAATCCATCTCAATCTCACTATGG 58.828 44.000 0.00 0.00 36.11 2.74
985 1752 6.766429 TGGAATCCATCTCAATCTCACTATG 58.234 40.000 0.00 0.00 0.00 2.23
986 1753 7.291885 TCTTGGAATCCATCTCAATCTCACTAT 59.708 37.037 1.39 0.00 31.53 2.12
987 1754 6.612863 TCTTGGAATCCATCTCAATCTCACTA 59.387 38.462 1.39 0.00 31.53 2.74
988 1755 5.427806 TCTTGGAATCCATCTCAATCTCACT 59.572 40.000 1.39 0.00 31.53 3.41
989 1756 5.678583 TCTTGGAATCCATCTCAATCTCAC 58.321 41.667 1.39 0.00 31.53 3.51
990 1757 5.963214 TCTTGGAATCCATCTCAATCTCA 57.037 39.130 1.39 0.00 31.53 3.27
991 1758 5.764192 CCTTCTTGGAATCCATCTCAATCTC 59.236 44.000 1.39 0.00 38.35 2.75
992 1759 5.398809 CCCTTCTTGGAATCCATCTCAATCT 60.399 44.000 1.39 0.00 38.35 2.40
993 1760 4.826183 CCCTTCTTGGAATCCATCTCAATC 59.174 45.833 1.39 0.00 38.35 2.67
994 1761 4.231426 ACCCTTCTTGGAATCCATCTCAAT 59.769 41.667 1.39 0.00 38.35 2.57
995 1762 3.593328 ACCCTTCTTGGAATCCATCTCAA 59.407 43.478 1.39 0.00 38.35 3.02
996 1763 3.192944 ACCCTTCTTGGAATCCATCTCA 58.807 45.455 1.39 0.00 38.35 3.27
997 1764 3.941704 ACCCTTCTTGGAATCCATCTC 57.058 47.619 1.39 0.00 38.35 2.75
998 1765 3.718956 CCTACCCTTCTTGGAATCCATCT 59.281 47.826 1.39 0.00 38.35 2.90
999 1766 3.459969 ACCTACCCTTCTTGGAATCCATC 59.540 47.826 1.39 0.00 38.35 3.51
1000 1767 3.459969 GACCTACCCTTCTTGGAATCCAT 59.540 47.826 1.39 0.00 38.35 3.41
1001 1768 2.844348 GACCTACCCTTCTTGGAATCCA 59.156 50.000 0.00 0.00 38.35 3.41
1002 1769 2.172930 GGACCTACCCTTCTTGGAATCC 59.827 54.545 0.00 0.00 38.35 3.01
1003 1770 2.158943 CGGACCTACCCTTCTTGGAATC 60.159 54.545 0.00 0.00 38.35 2.52
1004 1771 1.838077 CGGACCTACCCTTCTTGGAAT 59.162 52.381 0.00 0.00 38.35 3.01
1005 1772 1.203212 TCGGACCTACCCTTCTTGGAA 60.203 52.381 0.00 0.00 38.35 3.53
1006 1773 0.410663 TCGGACCTACCCTTCTTGGA 59.589 55.000 0.00 0.00 38.35 3.53
1007 1774 0.824759 CTCGGACCTACCCTTCTTGG 59.175 60.000 0.00 0.00 34.64 3.61
1008 1775 1.848652 TCTCGGACCTACCCTTCTTG 58.151 55.000 0.00 0.00 34.64 3.02
1009 1776 2.389715 CATCTCGGACCTACCCTTCTT 58.610 52.381 0.00 0.00 34.64 2.52
1010 1777 2.030045 GCATCTCGGACCTACCCTTCT 61.030 57.143 0.00 0.00 34.64 2.85
1011 1778 0.389757 GCATCTCGGACCTACCCTTC 59.610 60.000 0.00 0.00 34.64 3.46
1012 1779 0.325296 TGCATCTCGGACCTACCCTT 60.325 55.000 0.00 0.00 34.64 3.95
1013 1780 0.757188 CTGCATCTCGGACCTACCCT 60.757 60.000 0.00 0.00 34.64 4.34
1014 1781 0.755698 TCTGCATCTCGGACCTACCC 60.756 60.000 0.00 0.00 34.64 3.69
1015 1782 1.000283 CATCTGCATCTCGGACCTACC 60.000 57.143 0.00 0.00 31.81 3.18
1016 1783 1.000283 CCATCTGCATCTCGGACCTAC 60.000 57.143 0.00 0.00 31.81 3.18
1017 1784 1.133482 TCCATCTGCATCTCGGACCTA 60.133 52.381 0.00 0.00 31.81 3.08
1018 1785 0.397675 TCCATCTGCATCTCGGACCT 60.398 55.000 0.00 0.00 31.81 3.85
1019 1786 0.683973 ATCCATCTGCATCTCGGACC 59.316 55.000 0.00 0.00 31.81 4.46
1020 1787 2.297315 TGTATCCATCTGCATCTCGGAC 59.703 50.000 0.00 0.00 31.81 4.79
1021 1788 2.560105 CTGTATCCATCTGCATCTCGGA 59.440 50.000 0.00 0.00 33.95 4.55
1022 1789 2.353505 CCTGTATCCATCTGCATCTCGG 60.354 54.545 0.00 0.00 0.00 4.63
1026 1793 1.612726 GCCCCTGTATCCATCTGCATC 60.613 57.143 0.00 0.00 0.00 3.91
1034 1801 0.837272 GCTTGTAGCCCCTGTATCCA 59.163 55.000 0.00 0.00 34.48 3.41
1035 1802 0.837272 TGCTTGTAGCCCCTGTATCC 59.163 55.000 0.00 0.00 41.51 2.59
1038 1805 0.618458 CCTTGCTTGTAGCCCCTGTA 59.382 55.000 0.00 0.00 41.51 2.74
1040 1807 0.257039 ATCCTTGCTTGTAGCCCCTG 59.743 55.000 0.00 0.00 41.51 4.45
1041 1808 1.490910 GTATCCTTGCTTGTAGCCCCT 59.509 52.381 0.00 0.00 41.51 4.79
1042 1809 1.810412 CGTATCCTTGCTTGTAGCCCC 60.810 57.143 0.00 0.00 41.51 5.80
1043 1810 1.583054 CGTATCCTTGCTTGTAGCCC 58.417 55.000 0.00 0.00 41.51 5.19
1045 1812 0.938008 GCCGTATCCTTGCTTGTAGC 59.062 55.000 0.00 0.00 42.82 3.58
1047 1814 0.179094 CCGCCGTATCCTTGCTTGTA 60.179 55.000 0.00 0.00 0.00 2.41
1049 1816 2.823829 GCCGCCGTATCCTTGCTTG 61.824 63.158 0.00 0.00 0.00 4.01
1050 1817 2.513897 GCCGCCGTATCCTTGCTT 60.514 61.111 0.00 0.00 0.00 3.91
1052 1819 3.272334 CAGCCGCCGTATCCTTGC 61.272 66.667 0.00 0.00 0.00 4.01
1053 1820 2.588877 CCAGCCGCCGTATCCTTG 60.589 66.667 0.00 0.00 0.00 3.61
1055 1822 4.853142 TCCCAGCCGCCGTATCCT 62.853 66.667 0.00 0.00 0.00 3.24
1056 1823 3.809374 CTTCCCAGCCGCCGTATCC 62.809 68.421 0.00 0.00 0.00 2.59
1057 1824 2.280186 CTTCCCAGCCGCCGTATC 60.280 66.667 0.00 0.00 0.00 2.24
1058 1825 4.547367 GCTTCCCAGCCGCCGTAT 62.547 66.667 0.00 0.00 40.61 3.06
1064 1831 4.082523 TCTTCCGCTTCCCAGCCG 62.083 66.667 0.00 0.00 44.06 5.52
1066 1833 2.781595 TTCGTCTTCCGCTTCCCAGC 62.782 60.000 0.00 0.00 43.41 4.85
1068 1835 1.183030 TCTTCGTCTTCCGCTTCCCA 61.183 55.000 0.00 0.00 36.19 4.37
1069 1836 0.037605 TTCTTCGTCTTCCGCTTCCC 60.038 55.000 0.00 0.00 36.19 3.97
1070 1837 1.792006 TTTCTTCGTCTTCCGCTTCC 58.208 50.000 0.00 0.00 36.19 3.46
1076 1843 4.451435 CAGGTACCTTTTTCTTCGTCTTCC 59.549 45.833 13.15 0.00 0.00 3.46
1087 1854 1.235724 GCAGTCGCAGGTACCTTTTT 58.764 50.000 13.15 0.00 38.36 1.94
1092 1859 1.878522 CATCGCAGTCGCAGGTACC 60.879 63.158 2.73 2.73 38.40 3.34
1093 1860 1.878522 CCATCGCAGTCGCAGGTAC 60.879 63.158 0.00 0.00 38.40 3.34
1094 1861 2.494445 CCATCGCAGTCGCAGGTA 59.506 61.111 0.00 0.00 38.40 3.08
1106 1873 2.793946 CCGCCTTCTTTGCCATCG 59.206 61.111 0.00 0.00 0.00 3.84
1122 1889 3.479269 CTCACGCTCGGTTTCGCC 61.479 66.667 0.00 0.00 36.13 5.54
1182 1949 5.186198 ACAGGAATTGTCAGCTTGTATACC 58.814 41.667 0.00 0.00 33.87 2.73
1226 1993 2.217750 CCATCCACAGTTCGTTGAACA 58.782 47.619 11.81 0.00 44.11 3.18
1250 2017 3.646554 CGATGACATCGCCCCATG 58.353 61.111 23.70 0.00 46.55 3.66
1261 2028 1.006832 CGGTCCATGGAAACGATGAC 58.993 55.000 27.29 10.25 0.00 3.06
1292 2059 5.762045 ACGCATGCAATTTGTAGGATATTC 58.238 37.500 19.57 0.00 0.00 1.75
1293 2060 5.772825 ACGCATGCAATTTGTAGGATATT 57.227 34.783 19.57 0.00 0.00 1.28
1377 2144 9.860650 TGGCACTAATTTTGGTATCATAATACT 57.139 29.630 0.00 0.00 38.27 2.12
1401 2168 8.037382 AGTTATGCATATGAGATTTCGATTGG 57.963 34.615 7.36 0.00 0.00 3.16
1435 2202 2.103042 GGGACAGTCGCTGCATCAC 61.103 63.158 10.36 0.00 34.37 3.06
1497 2264 2.645567 CACAGTGTCGACGAGGCT 59.354 61.111 11.62 3.58 0.00 4.58
1500 2267 2.368105 GCTGCACAGTGTCGACGAG 61.368 63.158 11.62 5.62 0.00 4.18
1501 2268 2.354656 GCTGCACAGTGTCGACGA 60.355 61.111 11.62 0.00 0.00 4.20
1514 2281 4.002316 AGATTCTGACTTCAAAGAGCTGC 58.998 43.478 0.00 0.00 0.00 5.25
1536 2303 1.494721 ACCTGAGGCCTCTTTTGTTGA 59.505 47.619 32.28 9.62 0.00 3.18
1556 2323 1.303236 ATGCAGCGGCCACACTAAA 60.303 52.632 6.32 0.00 40.13 1.85
1639 2406 2.026822 ACGATCTGGCAGTCATCCTTTT 60.027 45.455 15.27 0.00 0.00 2.27
1643 2410 0.461548 TGACGATCTGGCAGTCATCC 59.538 55.000 15.27 3.44 39.63 3.51
1647 2414 0.528017 TCACTGACGATCTGGCAGTC 59.472 55.000 19.07 10.34 40.63 3.51
1708 2475 7.443272 CCAGATGAAATAGTGATCATGCAAGTA 59.557 37.037 0.00 0.00 36.45 2.24
1710 2477 6.262496 ACCAGATGAAATAGTGATCATGCAAG 59.738 38.462 0.00 0.00 36.45 4.01
1711 2478 6.124340 ACCAGATGAAATAGTGATCATGCAA 58.876 36.000 0.00 0.00 36.45 4.08
1714 2481 7.713942 TGAAGACCAGATGAAATAGTGATCATG 59.286 37.037 0.00 0.00 36.45 3.07
1718 2485 6.054295 GCTGAAGACCAGATGAAATAGTGAT 58.946 40.000 0.00 0.00 45.78 3.06
1720 2487 5.426504 AGCTGAAGACCAGATGAAATAGTG 58.573 41.667 0.00 0.00 45.78 2.74
1778 2550 6.514404 CCTTGATGGAGACTGCATGCAATG 62.514 50.000 22.88 13.68 43.01 2.82
1779 2551 2.430248 TGATGGAGACTGCATGCAAT 57.570 45.000 22.88 12.81 0.00 3.56
1780 2552 2.089201 CTTGATGGAGACTGCATGCAA 58.911 47.619 22.88 15.32 0.00 4.08
1781 2553 1.680860 CCTTGATGGAGACTGCATGCA 60.681 52.381 21.29 21.29 38.35 3.96
1782 2554 1.022735 CCTTGATGGAGACTGCATGC 58.977 55.000 14.87 11.82 38.35 4.06
1783 2555 2.414994 ACCTTGATGGAGACTGCATG 57.585 50.000 14.87 2.39 39.71 4.06
1784 2556 3.446442 AAACCTTGATGGAGACTGCAT 57.554 42.857 9.49 9.49 39.71 3.96
1785 2557 2.886523 CAAAACCTTGATGGAGACTGCA 59.113 45.455 0.00 0.00 39.71 4.41
1786 2558 2.229784 CCAAAACCTTGATGGAGACTGC 59.770 50.000 0.00 0.00 39.71 4.40
1787 2559 3.490348 ACCAAAACCTTGATGGAGACTG 58.510 45.455 0.00 0.00 39.71 3.51
1788 2560 3.884037 ACCAAAACCTTGATGGAGACT 57.116 42.857 0.00 0.00 39.71 3.24
1789 2561 4.217767 GGTAACCAAAACCTTGATGGAGAC 59.782 45.833 0.00 0.00 39.71 3.36
1790 2562 4.403734 GGTAACCAAAACCTTGATGGAGA 58.596 43.478 0.00 0.00 39.71 3.71
1791 2563 3.190535 CGGTAACCAAAACCTTGATGGAG 59.809 47.826 0.00 0.00 39.71 3.86
1792 2564 3.150767 CGGTAACCAAAACCTTGATGGA 58.849 45.455 0.00 0.00 39.71 3.41
1793 2565 2.230266 CCGGTAACCAAAACCTTGATGG 59.770 50.000 0.00 0.00 42.93 3.51
1794 2566 2.888414 ACCGGTAACCAAAACCTTGATG 59.112 45.455 4.49 0.00 34.14 3.07
1795 2567 3.151554 GACCGGTAACCAAAACCTTGAT 58.848 45.455 7.34 0.00 34.14 2.57
1796 2568 2.574450 GACCGGTAACCAAAACCTTGA 58.426 47.619 7.34 0.00 34.14 3.02
1797 2569 1.264826 CGACCGGTAACCAAAACCTTG 59.735 52.381 7.34 0.00 34.66 3.61
1798 2570 1.140652 TCGACCGGTAACCAAAACCTT 59.859 47.619 7.34 0.00 34.66 3.50
1799 2571 0.758123 TCGACCGGTAACCAAAACCT 59.242 50.000 7.34 0.00 34.66 3.50
1800 2572 1.592064 TTCGACCGGTAACCAAAACC 58.408 50.000 7.34 0.00 0.00 3.27
1801 2573 3.902261 ATTTCGACCGGTAACCAAAAC 57.098 42.857 7.34 0.00 0.00 2.43
1802 2574 4.857799 GAAATTTCGACCGGTAACCAAAA 58.142 39.130 7.34 4.39 0.00 2.44
1803 2575 4.486574 GAAATTTCGACCGGTAACCAAA 57.513 40.909 7.34 4.53 0.00 3.28
1817 2589 5.582689 ACCATGGGAAATCTCGAAATTTC 57.417 39.130 18.09 14.57 42.41 2.17
1818 2590 6.127451 GGTAACCATGGGAAATCTCGAAATTT 60.127 38.462 18.09 0.00 0.00 1.82
1819 2591 5.359860 GGTAACCATGGGAAATCTCGAAATT 59.640 40.000 18.09 0.00 0.00 1.82
1820 2592 4.887655 GGTAACCATGGGAAATCTCGAAAT 59.112 41.667 18.09 0.00 0.00 2.17
1821 2593 4.266714 GGTAACCATGGGAAATCTCGAAA 58.733 43.478 18.09 0.00 0.00 3.46
1822 2594 3.680475 CGGTAACCATGGGAAATCTCGAA 60.680 47.826 18.09 0.00 0.00 3.71
1823 2595 2.159014 CGGTAACCATGGGAAATCTCGA 60.159 50.000 18.09 0.00 0.00 4.04
1824 2596 2.210116 CGGTAACCATGGGAAATCTCG 58.790 52.381 18.09 6.68 0.00 4.04
1825 2597 1.947456 GCGGTAACCATGGGAAATCTC 59.053 52.381 18.09 0.00 0.00 2.75
1826 2598 1.745827 CGCGGTAACCATGGGAAATCT 60.746 52.381 18.09 0.00 0.00 2.40
1827 2599 0.661020 CGCGGTAACCATGGGAAATC 59.339 55.000 18.09 0.00 0.00 2.17
1828 2600 0.034863 ACGCGGTAACCATGGGAAAT 60.035 50.000 18.09 1.59 0.00 2.17
1829 2601 0.612229 TACGCGGTAACCATGGGAAA 59.388 50.000 18.09 0.00 0.00 3.13
1830 2602 0.831966 ATACGCGGTAACCATGGGAA 59.168 50.000 18.09 0.00 0.00 3.97
1831 2603 0.831966 AATACGCGGTAACCATGGGA 59.168 50.000 18.09 0.00 0.00 4.37
1832 2604 1.600485 GAAATACGCGGTAACCATGGG 59.400 52.381 18.09 0.00 0.00 4.00
1833 2605 1.600485 GGAAATACGCGGTAACCATGG 59.400 52.381 11.19 11.19 0.00 3.66
1834 2606 1.259507 CGGAAATACGCGGTAACCATG 59.740 52.381 12.47 0.00 0.00 3.66
1835 2607 1.134729 ACGGAAATACGCGGTAACCAT 60.135 47.619 12.47 0.00 37.37 3.55
1836 2608 0.246086 ACGGAAATACGCGGTAACCA 59.754 50.000 12.47 0.00 37.37 3.67
1837 2609 0.646895 CACGGAAATACGCGGTAACC 59.353 55.000 12.47 6.30 37.37 2.85
1838 2610 0.025384 GCACGGAAATACGCGGTAAC 59.975 55.000 12.47 0.00 37.37 2.50
1839 2611 1.083242 GGCACGGAAATACGCGGTAA 61.083 55.000 12.47 0.00 37.37 2.85
1840 2612 1.519013 GGCACGGAAATACGCGGTA 60.519 57.895 12.47 0.25 37.37 4.02
1841 2613 2.816520 GGCACGGAAATACGCGGT 60.817 61.111 12.47 0.00 37.37 5.68
1842 2614 3.569690 GGGCACGGAAATACGCGG 61.570 66.667 12.47 0.00 37.37 6.46
1843 2615 3.569690 GGGGCACGGAAATACGCG 61.570 66.667 3.53 3.53 37.37 6.01
1844 2616 2.124860 AGGGGCACGGAAATACGC 60.125 61.111 0.00 0.00 37.37 4.42
1845 2617 1.881252 CGAGGGGCACGGAAATACG 60.881 63.158 0.00 0.00 40.31 3.06
1846 2618 4.120085 CGAGGGGCACGGAAATAC 57.880 61.111 0.00 0.00 0.00 1.89
1853 2625 1.523032 GGATTTACCGAGGGGCACG 60.523 63.158 0.00 0.00 36.48 5.34
1854 2626 1.153025 GGGATTTACCGAGGGGCAC 60.153 63.158 0.00 0.00 40.11 5.01
1855 2627 2.380285 GGGGATTTACCGAGGGGCA 61.380 63.158 0.00 0.00 40.11 5.36
1856 2628 1.716028 ATGGGGATTTACCGAGGGGC 61.716 60.000 0.00 0.00 40.11 5.80
1857 2629 1.350019 GTATGGGGATTTACCGAGGGG 59.650 57.143 0.00 0.00 40.11 4.79
1858 2630 1.350019 GGTATGGGGATTTACCGAGGG 59.650 57.143 0.00 0.00 40.11 4.30
1859 2631 2.853235 GGTATGGGGATTTACCGAGG 57.147 55.000 0.00 0.00 40.11 4.63
1863 2635 1.418637 TGCTCGGTATGGGGATTTACC 59.581 52.381 0.00 0.00 38.08 2.85
1864 2636 2.922740 TGCTCGGTATGGGGATTTAC 57.077 50.000 0.00 0.00 0.00 2.01
1865 2637 3.935818 TTTGCTCGGTATGGGGATTTA 57.064 42.857 0.00 0.00 0.00 1.40
1866 2638 2.818751 TTTGCTCGGTATGGGGATTT 57.181 45.000 0.00 0.00 0.00 2.17
1867 2639 2.818751 TTTTGCTCGGTATGGGGATT 57.181 45.000 0.00 0.00 0.00 3.01
1868 2640 2.818751 TTTTTGCTCGGTATGGGGAT 57.181 45.000 0.00 0.00 0.00 3.85
1926 2698 9.764363 CAGATCCTGCATGTACTTTACTATAAA 57.236 33.333 0.00 0.00 0.00 1.40
1927 2699 9.143155 TCAGATCCTGCATGTACTTTACTATAA 57.857 33.333 0.00 0.00 0.00 0.98
1928 2700 8.706322 TCAGATCCTGCATGTACTTTACTATA 57.294 34.615 0.00 0.00 0.00 1.31
1929 2701 7.603180 TCAGATCCTGCATGTACTTTACTAT 57.397 36.000 0.00 0.00 0.00 2.12
1930 2702 7.603180 ATCAGATCCTGCATGTACTTTACTA 57.397 36.000 0.00 0.00 0.00 1.82
1931 2703 5.939764 TCAGATCCTGCATGTACTTTACT 57.060 39.130 0.00 0.00 0.00 2.24
1932 2704 8.662781 TTAATCAGATCCTGCATGTACTTTAC 57.337 34.615 0.00 0.00 0.00 2.01
1933 2705 9.276590 CATTAATCAGATCCTGCATGTACTTTA 57.723 33.333 0.00 0.00 0.00 1.85
1934 2706 7.255381 GCATTAATCAGATCCTGCATGTACTTT 60.255 37.037 0.00 0.00 0.00 2.66
1935 2707 6.206243 GCATTAATCAGATCCTGCATGTACTT 59.794 38.462 0.00 0.00 0.00 2.24
1936 2708 5.704515 GCATTAATCAGATCCTGCATGTACT 59.295 40.000 0.00 0.00 0.00 2.73
1937 2709 5.106396 GGCATTAATCAGATCCTGCATGTAC 60.106 44.000 11.74 0.00 0.00 2.90
1938 2710 5.005740 GGCATTAATCAGATCCTGCATGTA 58.994 41.667 11.74 0.00 0.00 2.29
1939 2711 3.825014 GGCATTAATCAGATCCTGCATGT 59.175 43.478 11.74 0.00 0.00 3.21
1940 2712 3.824443 TGGCATTAATCAGATCCTGCATG 59.176 43.478 11.74 0.00 0.00 4.06
1941 2713 4.108501 TGGCATTAATCAGATCCTGCAT 57.891 40.909 11.74 0.00 0.00 3.96
1942 2714 3.581265 TGGCATTAATCAGATCCTGCA 57.419 42.857 11.74 0.00 0.00 4.41
1943 2715 4.077108 TCATGGCATTAATCAGATCCTGC 58.923 43.478 0.00 4.08 0.00 4.85
1944 2716 5.557866 TCTCATGGCATTAATCAGATCCTG 58.442 41.667 0.00 0.00 0.00 3.86
1945 2717 5.310068 ACTCTCATGGCATTAATCAGATCCT 59.690 40.000 0.00 0.00 0.00 3.24
1946 2718 5.558818 ACTCTCATGGCATTAATCAGATCC 58.441 41.667 0.00 0.00 0.00 3.36
1947 2719 6.072618 CCAACTCTCATGGCATTAATCAGATC 60.073 42.308 0.00 0.00 0.00 2.75
1948 2720 5.768662 CCAACTCTCATGGCATTAATCAGAT 59.231 40.000 0.00 0.00 0.00 2.90
1949 2721 5.128205 CCAACTCTCATGGCATTAATCAGA 58.872 41.667 0.00 0.00 0.00 3.27
1950 2722 4.885907 ACCAACTCTCATGGCATTAATCAG 59.114 41.667 0.00 0.00 41.89 2.90
1951 2723 4.858850 ACCAACTCTCATGGCATTAATCA 58.141 39.130 0.00 0.00 41.89 2.57
1952 2724 5.591877 AGAACCAACTCTCATGGCATTAATC 59.408 40.000 0.00 0.00 41.89 1.75
1953 2725 5.513233 AGAACCAACTCTCATGGCATTAAT 58.487 37.500 0.00 0.00 41.89 1.40
1954 2726 4.922206 AGAACCAACTCTCATGGCATTAA 58.078 39.130 0.00 0.00 41.89 1.40
1955 2727 4.019411 TGAGAACCAACTCTCATGGCATTA 60.019 41.667 0.00 0.00 45.45 1.90
1956 2728 3.245016 TGAGAACCAACTCTCATGGCATT 60.245 43.478 0.00 0.00 45.45 3.56
1957 2729 2.306805 TGAGAACCAACTCTCATGGCAT 59.693 45.455 0.00 0.00 45.45 4.40
1958 2730 1.699083 TGAGAACCAACTCTCATGGCA 59.301 47.619 0.00 0.00 45.45 4.92
1959 2731 2.479566 TGAGAACCAACTCTCATGGC 57.520 50.000 0.00 0.00 45.45 4.40
1964 2736 3.499918 CCAACACATGAGAACCAACTCTC 59.500 47.826 0.00 0.00 41.98 3.20
1965 2737 3.117888 ACCAACACATGAGAACCAACTCT 60.118 43.478 0.00 0.00 37.73 3.24
1966 2738 3.214328 ACCAACACATGAGAACCAACTC 58.786 45.455 0.00 0.00 37.42 3.01
1967 2739 3.297134 ACCAACACATGAGAACCAACT 57.703 42.857 0.00 0.00 0.00 3.16
1968 2740 3.058224 GCTACCAACACATGAGAACCAAC 60.058 47.826 0.00 0.00 0.00 3.77
1969 2741 3.146066 GCTACCAACACATGAGAACCAA 58.854 45.455 0.00 0.00 0.00 3.67
1970 2742 2.105649 TGCTACCAACACATGAGAACCA 59.894 45.455 0.00 0.00 0.00 3.67
1971 2743 2.778299 TGCTACCAACACATGAGAACC 58.222 47.619 0.00 0.00 0.00 3.62
1985 2757 5.751509 CCAAAACAAAAACTAGGTTGCTACC 59.248 40.000 9.54 9.54 45.39 3.18
1986 2758 5.751509 CCCAAAACAAAAACTAGGTTGCTAC 59.248 40.000 0.00 0.00 0.00 3.58
1987 2759 5.657302 TCCCAAAACAAAAACTAGGTTGCTA 59.343 36.000 0.00 0.00 0.00 3.49
1988 2760 4.468153 TCCCAAAACAAAAACTAGGTTGCT 59.532 37.500 0.00 0.00 0.00 3.91
1989 2761 4.760878 TCCCAAAACAAAAACTAGGTTGC 58.239 39.130 0.00 0.00 0.00 4.17
1990 2762 5.105106 ACCTCCCAAAACAAAAACTAGGTTG 60.105 40.000 0.00 0.00 0.00 3.77
1991 2763 5.027460 ACCTCCCAAAACAAAAACTAGGTT 58.973 37.500 0.00 0.00 0.00 3.50
1992 2764 4.616553 ACCTCCCAAAACAAAAACTAGGT 58.383 39.130 0.00 0.00 0.00 3.08
1993 2765 4.893524 AGACCTCCCAAAACAAAAACTAGG 59.106 41.667 0.00 0.00 0.00 3.02
1994 2766 5.828328 AGAGACCTCCCAAAACAAAAACTAG 59.172 40.000 0.00 0.00 0.00 2.57
1995 2767 5.592688 CAGAGACCTCCCAAAACAAAAACTA 59.407 40.000 0.00 0.00 0.00 2.24
1996 2768 4.402474 CAGAGACCTCCCAAAACAAAAACT 59.598 41.667 0.00 0.00 0.00 2.66
1997 2769 4.441495 CCAGAGACCTCCCAAAACAAAAAC 60.441 45.833 0.00 0.00 0.00 2.43
1998 2770 3.704061 CCAGAGACCTCCCAAAACAAAAA 59.296 43.478 0.00 0.00 0.00 1.94
1999 2771 3.295973 CCAGAGACCTCCCAAAACAAAA 58.704 45.455 0.00 0.00 0.00 2.44
2000 2772 2.243736 ACCAGAGACCTCCCAAAACAAA 59.756 45.455 0.00 0.00 0.00 2.83
2001 2773 1.850345 ACCAGAGACCTCCCAAAACAA 59.150 47.619 0.00 0.00 0.00 2.83
2002 2774 1.518367 ACCAGAGACCTCCCAAAACA 58.482 50.000 0.00 0.00 0.00 2.83
2003 2775 2.505405 GAACCAGAGACCTCCCAAAAC 58.495 52.381 0.00 0.00 0.00 2.43
2004 2776 1.071699 CGAACCAGAGACCTCCCAAAA 59.928 52.381 0.00 0.00 0.00 2.44
2005 2777 0.685097 CGAACCAGAGACCTCCCAAA 59.315 55.000 0.00 0.00 0.00 3.28
2006 2778 0.178944 TCGAACCAGAGACCTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
2007 2779 0.178944 TTCGAACCAGAGACCTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
2008 2780 1.134670 CATTCGAACCAGAGACCTCCC 60.135 57.143 0.00 0.00 0.00 4.30
2009 2781 1.550976 ACATTCGAACCAGAGACCTCC 59.449 52.381 0.00 0.00 0.00 4.30
2010 2782 3.254892 GAACATTCGAACCAGAGACCTC 58.745 50.000 0.00 0.00 0.00 3.85
2011 2783 3.320673 GAACATTCGAACCAGAGACCT 57.679 47.619 0.00 0.00 0.00 3.85
2070 2842 7.760131 AATACCGAGAATATTTCGAACGAAA 57.240 32.000 21.28 21.28 46.37 3.46
2071 2843 7.703621 AGAAATACCGAGAATATTTCGAACGAA 59.296 33.333 16.51 5.53 46.64 3.85
2072 2844 7.198390 AGAAATACCGAGAATATTTCGAACGA 58.802 34.615 16.51 0.00 46.64 3.85
2073 2845 7.390918 AGAAATACCGAGAATATTTCGAACG 57.609 36.000 16.51 0.00 46.64 3.95
2074 2846 7.358187 CCGAGAAATACCGAGAATATTTCGAAC 60.358 40.741 16.51 0.00 46.64 3.95
2075 2847 6.639686 CCGAGAAATACCGAGAATATTTCGAA 59.360 38.462 16.51 0.00 46.64 3.71
2076 2848 6.147581 CCGAGAAATACCGAGAATATTTCGA 58.852 40.000 16.51 0.00 46.64 3.71
2077 2849 5.919141 ACCGAGAAATACCGAGAATATTTCG 59.081 40.000 10.33 10.96 46.64 3.46
2078 2850 8.697960 GTTACCGAGAAATACCGAGAATATTTC 58.302 37.037 8.71 8.71 44.27 2.17
2079 2851 7.654923 GGTTACCGAGAAATACCGAGAATATTT 59.345 37.037 0.00 0.00 35.43 1.40
2080 2852 7.150640 GGTTACCGAGAAATACCGAGAATATT 58.849 38.462 0.00 0.00 0.00 1.28
2081 2853 6.685657 GGTTACCGAGAAATACCGAGAATAT 58.314 40.000 0.00 0.00 0.00 1.28
2082 2854 6.076981 GGTTACCGAGAAATACCGAGAATA 57.923 41.667 0.00 0.00 0.00 1.75
2083 2855 4.941657 GGTTACCGAGAAATACCGAGAAT 58.058 43.478 0.00 0.00 0.00 2.40
2084 2856 4.376340 GGTTACCGAGAAATACCGAGAA 57.624 45.455 0.00 0.00 0.00 2.87
2109 2881 2.416747 GGGACTGGTAAACGTGGTTAC 58.583 52.381 0.00 0.00 33.91 2.50
2110 2882 1.347378 GGGGACTGGTAAACGTGGTTA 59.653 52.381 0.00 0.00 0.00 2.85
2111 2883 0.109153 GGGGACTGGTAAACGTGGTT 59.891 55.000 0.00 0.00 0.00 3.67
2112 2884 1.756665 GGGGACTGGTAAACGTGGT 59.243 57.895 0.00 0.00 0.00 4.16
2113 2885 1.002990 GGGGGACTGGTAAACGTGG 60.003 63.158 0.00 0.00 0.00 4.94
2114 2886 0.036671 GAGGGGGACTGGTAAACGTG 60.037 60.000 0.00 0.00 0.00 4.49
2115 2887 1.538687 CGAGGGGGACTGGTAAACGT 61.539 60.000 0.00 0.00 0.00 3.99
2116 2888 1.217244 CGAGGGGGACTGGTAAACG 59.783 63.158 0.00 0.00 0.00 3.60
2117 2889 1.196766 ACCGAGGGGGACTGGTAAAC 61.197 60.000 0.00 0.00 39.97 2.01
2118 2890 0.413037 TACCGAGGGGGACTGGTAAA 59.587 55.000 0.00 0.00 39.97 2.01
2119 2891 0.413037 TTACCGAGGGGGACTGGTAA 59.587 55.000 0.00 0.00 38.93 2.85
2120 2892 0.413037 TTTACCGAGGGGGACTGGTA 59.587 55.000 0.00 0.00 39.97 3.25
2121 2893 0.474273 TTTTACCGAGGGGGACTGGT 60.474 55.000 0.00 0.00 39.97 4.00
2122 2894 0.916809 ATTTTACCGAGGGGGACTGG 59.083 55.000 0.00 0.00 39.97 4.00
2123 2895 2.365582 CAATTTTACCGAGGGGGACTG 58.634 52.381 0.00 0.00 39.97 3.51
2124 2896 1.340697 GCAATTTTACCGAGGGGGACT 60.341 52.381 0.00 0.00 39.97 3.85
2125 2897 1.100510 GCAATTTTACCGAGGGGGAC 58.899 55.000 0.00 0.00 39.97 4.46
2126 2898 0.033894 GGCAATTTTACCGAGGGGGA 60.034 55.000 0.00 0.00 39.97 4.81
2127 2899 0.033503 AGGCAATTTTACCGAGGGGG 60.034 55.000 0.00 0.00 43.62 5.40
2128 2900 1.340600 TGAGGCAATTTTACCGAGGGG 60.341 52.381 0.00 0.00 40.11 4.79
2129 2901 2.122783 TGAGGCAATTTTACCGAGGG 57.877 50.000 0.00 0.00 0.00 4.30
2130 2902 3.242739 CGAATGAGGCAATTTTACCGAGG 60.243 47.826 0.00 0.00 0.00 4.63
2131 2903 3.242739 CCGAATGAGGCAATTTTACCGAG 60.243 47.826 0.00 0.00 0.00 4.63
2132 2904 2.680841 CCGAATGAGGCAATTTTACCGA 59.319 45.455 0.00 0.00 0.00 4.69
2133 2905 2.422127 ACCGAATGAGGCAATTTTACCG 59.578 45.455 0.00 0.00 33.69 4.02
2134 2906 5.337554 GTTACCGAATGAGGCAATTTTACC 58.662 41.667 0.00 0.00 33.69 2.85
2135 2907 5.106078 TGGTTACCGAATGAGGCAATTTTAC 60.106 40.000 0.00 0.00 33.69 2.01
2136 2908 5.010933 TGGTTACCGAATGAGGCAATTTTA 58.989 37.500 0.00 0.00 33.69 1.52
2137 2909 3.829601 TGGTTACCGAATGAGGCAATTTT 59.170 39.130 0.00 0.00 33.69 1.82
2138 2910 3.426615 TGGTTACCGAATGAGGCAATTT 58.573 40.909 0.00 0.00 33.69 1.82
2139 2911 3.080300 TGGTTACCGAATGAGGCAATT 57.920 42.857 0.00 0.00 33.69 2.32
2140 2912 2.799126 TGGTTACCGAATGAGGCAAT 57.201 45.000 0.00 0.00 33.69 3.56
2141 2913 2.570415 TTGGTTACCGAATGAGGCAA 57.430 45.000 0.00 0.00 33.69 4.52
2142 2914 2.554893 GTTTTGGTTACCGAATGAGGCA 59.445 45.455 4.72 0.00 33.69 4.75
2143 2915 2.094906 GGTTTTGGTTACCGAATGAGGC 60.095 50.000 4.72 0.00 33.69 4.70
2144 2916 3.418047 AGGTTTTGGTTACCGAATGAGG 58.582 45.455 4.72 0.00 40.69 3.86
2145 2917 4.794169 CAAGGTTTTGGTTACCGAATGAG 58.206 43.478 4.72 0.00 40.69 2.90
2146 2918 4.839668 CAAGGTTTTGGTTACCGAATGA 57.160 40.909 4.72 0.00 40.69 2.57
2158 2930 4.034285 AGGTATGGAGACCAAGGTTTTG 57.966 45.455 0.00 0.00 42.47 2.44
2159 2931 4.324331 GCTAGGTATGGAGACCAAGGTTTT 60.324 45.833 0.00 0.00 42.47 2.43
2160 2932 3.200165 GCTAGGTATGGAGACCAAGGTTT 59.800 47.826 0.00 0.00 42.47 3.27
2161 2933 2.772515 GCTAGGTATGGAGACCAAGGTT 59.227 50.000 0.00 0.00 42.47 3.50
2162 2934 2.292918 TGCTAGGTATGGAGACCAAGGT 60.293 50.000 0.00 0.00 42.47 3.50
2163 2935 2.103263 GTGCTAGGTATGGAGACCAAGG 59.897 54.545 0.00 0.00 42.47 3.61
2164 2936 3.034635 AGTGCTAGGTATGGAGACCAAG 58.965 50.000 0.00 0.00 42.47 3.61
2165 2937 2.766263 CAGTGCTAGGTATGGAGACCAA 59.234 50.000 0.00 0.00 42.47 3.67
2166 2938 2.024369 TCAGTGCTAGGTATGGAGACCA 60.024 50.000 0.00 0.00 42.47 4.02
2206 2978 1.421268 AGACAGGATCAACCAGCACAA 59.579 47.619 0.00 0.00 42.04 3.33
2267 3039 5.133941 ACGTAGATTAGCTCTTGATCCTCA 58.866 41.667 0.00 0.00 35.28 3.86
2294 3066 1.496857 TGGGTGTTCCTGAATGGACAA 59.503 47.619 0.00 0.00 46.14 3.18
2296 3068 1.826385 CTGGGTGTTCCTGAATGGAC 58.174 55.000 0.00 0.00 46.14 4.02
2300 3072 1.002134 CGGCTGGGTGTTCCTGAAT 60.002 57.895 0.00 0.00 36.68 2.57
2309 3081 2.825836 GAATCAGGCGGCTGGGTG 60.826 66.667 35.20 14.25 0.00 4.61
2396 3168 0.394488 TGACCGAGGCCTCTACTGAG 60.394 60.000 29.73 13.29 39.92 3.35
2411 3183 4.818546 CCATGGATGACTTTCATACTGACC 59.181 45.833 5.56 0.00 38.53 4.02
2523 3295 1.173913 GCAAGAGGCAACCCGTTATT 58.826 50.000 0.00 0.00 43.97 1.40
2555 3327 1.470098 ACATGGCGTTGAAGCTTGATC 59.530 47.619 2.10 0.00 37.29 2.92
2592 3364 5.986501 ACTTCCAGATACTCTCGTCTTTT 57.013 39.130 0.00 0.00 0.00 2.27
2596 3368 5.106078 ACAGAAACTTCCAGATACTCTCGTC 60.106 44.000 0.00 0.00 0.00 4.20
2624 3396 2.125310 CCACCGACGCCATAAGCA 60.125 61.111 0.00 0.00 44.04 3.91
2672 3444 0.320160 GTTTACCGCGTTCCTGAGGT 60.320 55.000 4.92 0.00 44.66 3.85
2799 3572 2.559668 TGGACAGTAGGGTAAACAGTCG 59.440 50.000 0.00 0.00 35.04 4.18
2896 3670 6.385649 ACGACAACATATCAAACCTTTGTT 57.614 33.333 0.00 0.00 39.18 2.83
2974 3766 1.003696 GGCAGAGGAAGCTAAACCAGT 59.996 52.381 7.16 0.00 0.00 4.00
2981 3773 2.234908 GAGAAGTTGGCAGAGGAAGCTA 59.765 50.000 0.00 0.00 0.00 3.32
3102 3894 3.643199 TTTACACCATGCCTAGATGCA 57.357 42.857 0.00 0.00 46.94 3.96
3103 3895 4.981806 TTTTTACACCATGCCTAGATGC 57.018 40.909 0.00 0.00 0.00 3.91
3146 3938 6.732154 ACATCCATTTGAGCGAGAATTAATG 58.268 36.000 0.00 0.00 0.00 1.90
3194 3986 1.409064 TGTCGCTGAGGTGGATGTATC 59.591 52.381 0.00 0.00 0.00 2.24
3254 4046 3.037431 TGCAATTTTGGCACATGGTAC 57.963 42.857 0.00 0.00 39.30 3.34
3310 4104 6.959639 TGTTTCTTAAGCTTTGAGTGGATT 57.040 33.333 3.20 0.00 0.00 3.01
3438 4233 7.670364 CCAGATTCAAAATAAGTTTTCCAGGT 58.330 34.615 0.00 0.00 35.41 4.00
3448 4244 4.222588 TGTTGGGGCCAGATTCAAAATAAG 59.777 41.667 4.39 0.00 0.00 1.73
3499 4295 1.260561 GGAATGCGCGGTTACATGTAG 59.739 52.381 8.83 0.00 0.00 2.74
3509 4305 2.179018 CCTTGTTGGAATGCGCGG 59.821 61.111 8.83 0.00 38.35 6.46
3523 4319 1.812571 CGCATAGGTCAAACAAGCCTT 59.187 47.619 0.00 0.00 34.07 4.35
3541 4337 2.658593 CCGACGATCATGGACCGC 60.659 66.667 0.00 0.00 0.00 5.68
3605 4401 1.014352 GGGGTCATGTGTGTTATCGC 58.986 55.000 0.00 0.00 0.00 4.58
3613 4409 0.188342 AAAAGCCAGGGGTCATGTGT 59.812 50.000 0.00 0.00 0.00 3.72
3661 4459 7.569599 AATATTTACCCGGAGAACCAGATAT 57.430 36.000 0.73 0.00 35.59 1.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.