Multiple sequence alignment - TraesCS6D01G227400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G227400 chr6D 100.000 2552 0 0 1 2552 318951954 318949403 0.000000e+00 4713.0
1 TraesCS6D01G227400 chr5A 97.646 807 18 1 769 1574 90614564 90613758 0.000000e+00 1384.0
2 TraesCS6D01G227400 chr5A 84.738 688 87 10 895 1581 74104972 74105642 0.000000e+00 673.0
3 TraesCS6D01G227400 chr1A 96.814 816 22 4 769 1581 442463967 442464781 0.000000e+00 1360.0
4 TraesCS6D01G227400 chr6A 96.794 811 19 3 769 1578 40615016 40614212 0.000000e+00 1347.0
5 TraesCS6D01G227400 chr6A 87.050 695 60 18 1870 2552 456721619 456720943 0.000000e+00 758.0
6 TraesCS6D01G227400 chr6A 89.121 239 16 2 544 772 456722825 456722587 3.210000e-74 289.0
7 TraesCS6D01G227400 chr6A 86.170 282 18 11 1 282 456749542 456749282 4.160000e-73 285.0
8 TraesCS6D01G227400 chr6A 87.368 190 23 1 1385 1573 481078812 481078623 1.540000e-52 217.0
9 TraesCS6D01G227400 chr4B 96.069 814 31 1 769 1581 282888879 282888066 0.000000e+00 1325.0
10 TraesCS6D01G227400 chr6B 87.187 999 68 32 1569 2552 504588411 504589364 0.000000e+00 1081.0
11 TraesCS6D01G227400 chr6B 92.188 256 13 1 517 772 504588184 504588432 3.120000e-94 355.0
12 TraesCS6D01G227400 chr6B 89.268 205 14 4 97 296 504587517 504587718 1.520000e-62 250.0
13 TraesCS6D01G227400 chr7D 89.370 809 82 2 769 1577 234357151 234356347 0.000000e+00 1014.0
14 TraesCS6D01G227400 chr1B 87.871 808 95 3 769 1574 393448568 393447762 0.000000e+00 946.0
15 TraesCS6D01G227400 chr3D 86.198 797 102 3 769 1565 29709447 29708659 0.000000e+00 856.0
16 TraesCS6D01G227400 chr3D 81.818 121 14 6 517 637 531353375 531353263 7.520000e-16 95.3
17 TraesCS6D01G227400 chr7B 87.661 697 85 1 878 1573 206346626 206345930 0.000000e+00 809.0
18 TraesCS6D01G227400 chr7B 93.056 288 16 4 2266 2552 412763088 412762804 3.930000e-113 418.0
19 TraesCS6D01G227400 chr7B 92.982 114 8 0 769 882 206355788 206355675 1.570000e-37 167.0
20 TraesCS6D01G227400 chr7B 100.000 29 0 0 1984 2012 412763177 412763149 1.000000e-03 54.7
21 TraesCS6D01G227400 chr5B 89.381 113 12 0 1868 1980 193796675 193796563 2.650000e-30 143.0
22 TraesCS6D01G227400 chr7A 82.895 152 21 3 1861 2011 652485270 652485417 5.730000e-27 132.0
23 TraesCS6D01G227400 chr2D 82.759 116 13 5 517 632 46682946 46682838 2.090000e-16 97.1
24 TraesCS6D01G227400 chr4D 77.064 109 21 4 1868 1974 506961883 506961989 2.740000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G227400 chr6D 318949403 318951954 2551 True 4713.0 4713 100.000000 1 2552 1 chr6D.!!$R1 2551
1 TraesCS6D01G227400 chr5A 90613758 90614564 806 True 1384.0 1384 97.646000 769 1574 1 chr5A.!!$R1 805
2 TraesCS6D01G227400 chr5A 74104972 74105642 670 False 673.0 673 84.738000 895 1581 1 chr5A.!!$F1 686
3 TraesCS6D01G227400 chr1A 442463967 442464781 814 False 1360.0 1360 96.814000 769 1581 1 chr1A.!!$F1 812
4 TraesCS6D01G227400 chr6A 40614212 40615016 804 True 1347.0 1347 96.794000 769 1578 1 chr6A.!!$R1 809
5 TraesCS6D01G227400 chr6A 456720943 456722825 1882 True 523.5 758 88.085500 544 2552 2 chr6A.!!$R4 2008
6 TraesCS6D01G227400 chr4B 282888066 282888879 813 True 1325.0 1325 96.069000 769 1581 1 chr4B.!!$R1 812
7 TraesCS6D01G227400 chr6B 504587517 504589364 1847 False 562.0 1081 89.547667 97 2552 3 chr6B.!!$F1 2455
8 TraesCS6D01G227400 chr7D 234356347 234357151 804 True 1014.0 1014 89.370000 769 1577 1 chr7D.!!$R1 808
9 TraesCS6D01G227400 chr1B 393447762 393448568 806 True 946.0 946 87.871000 769 1574 1 chr1B.!!$R1 805
10 TraesCS6D01G227400 chr3D 29708659 29709447 788 True 856.0 856 86.198000 769 1565 1 chr3D.!!$R1 796
11 TraesCS6D01G227400 chr7B 206345930 206346626 696 True 809.0 809 87.661000 878 1573 1 chr7B.!!$R1 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.031178 GCAGTTGTTGGAGCTGGTTG 59.969 55.0 0.0 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1833 2076 0.114364 ATGTGGAAGGGGGTGGAAAC 59.886 55.0 0.0 0.0 0.0 2.78 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.702494 AGAAGTTTTCTCCATTTCATTTGAATC 57.298 29.630 0.00 0.00 34.07 2.52
27 28 9.702494 GAAGTTTTCTCCATTTCATTTGAATCT 57.298 29.630 0.00 0.00 33.54 2.40
28 29 9.485206 AAGTTTTCTCCATTTCATTTGAATCTG 57.515 29.630 0.00 0.00 33.54 2.90
29 30 7.601508 AGTTTTCTCCATTTCATTTGAATCTGC 59.398 33.333 0.00 0.00 33.54 4.26
30 31 6.593268 TTCTCCATTTCATTTGAATCTGCA 57.407 33.333 0.00 0.00 33.54 4.41
31 32 6.593268 TCTCCATTTCATTTGAATCTGCAA 57.407 33.333 0.00 0.00 33.54 4.08
32 33 6.627243 TCTCCATTTCATTTGAATCTGCAAG 58.373 36.000 0.00 0.00 33.54 4.01
33 34 5.726397 TCCATTTCATTTGAATCTGCAAGG 58.274 37.500 0.00 0.00 33.54 3.61
34 35 5.481122 TCCATTTCATTTGAATCTGCAAGGA 59.519 36.000 0.00 0.00 33.54 3.36
35 36 5.579511 CCATTTCATTTGAATCTGCAAGGAC 59.420 40.000 0.00 0.00 33.54 3.85
36 37 6.395629 CATTTCATTTGAATCTGCAAGGACT 58.604 36.000 0.00 0.00 33.54 3.85
37 38 5.381174 TTCATTTGAATCTGCAAGGACTG 57.619 39.130 0.00 0.00 0.00 3.51
38 39 5.794507 TTTCATTTGAATCTGCAAGGACTGC 60.795 40.000 0.00 0.00 41.73 4.40
39 40 8.135287 TTTCATTTGAATCTGCAAGGACTGCA 62.135 38.462 0.00 0.00 45.41 4.41
40 41 9.511527 TTTCATTTGAATCTGCAAGGACTGCAA 62.512 37.037 0.58 0.00 46.13 4.08
48 49 1.741993 CAAGGACTGCAAAACGAACG 58.258 50.000 0.00 0.00 0.00 3.95
49 50 0.661020 AAGGACTGCAAAACGAACGG 59.339 50.000 0.00 0.00 0.00 4.44
50 51 0.463116 AGGACTGCAAAACGAACGGT 60.463 50.000 0.00 0.00 0.00 4.83
51 52 1.202557 AGGACTGCAAAACGAACGGTA 60.203 47.619 0.00 0.00 0.00 4.02
52 53 1.193874 GGACTGCAAAACGAACGGTAG 59.806 52.381 0.00 0.00 0.00 3.18
53 54 1.862827 GACTGCAAAACGAACGGTAGT 59.137 47.619 0.00 0.00 0.00 2.73
54 55 1.595794 ACTGCAAAACGAACGGTAGTG 59.404 47.619 0.00 0.00 0.00 2.74
55 56 0.938713 TGCAAAACGAACGGTAGTGG 59.061 50.000 0.00 0.00 0.00 4.00
56 57 0.385098 GCAAAACGAACGGTAGTGGC 60.385 55.000 0.00 0.00 0.00 5.01
57 58 0.938713 CAAAACGAACGGTAGTGGCA 59.061 50.000 0.00 0.00 0.00 4.92
58 59 1.070175 CAAAACGAACGGTAGTGGCAG 60.070 52.381 0.00 0.00 0.00 4.85
59 60 0.105408 AAACGAACGGTAGTGGCAGT 59.895 50.000 0.00 0.00 0.00 4.40
60 61 0.105408 AACGAACGGTAGTGGCAGTT 59.895 50.000 0.00 0.00 0.00 3.16
61 62 0.599204 ACGAACGGTAGTGGCAGTTG 60.599 55.000 0.00 0.00 0.00 3.16
62 63 0.599204 CGAACGGTAGTGGCAGTTGT 60.599 55.000 0.00 0.00 0.00 3.32
63 64 1.589803 GAACGGTAGTGGCAGTTGTT 58.410 50.000 0.00 3.56 0.00 2.83
64 65 1.263217 GAACGGTAGTGGCAGTTGTTG 59.737 52.381 0.00 0.00 0.00 3.33
65 66 0.534203 ACGGTAGTGGCAGTTGTTGG 60.534 55.000 0.00 0.00 0.00 3.77
66 67 0.250124 CGGTAGTGGCAGTTGTTGGA 60.250 55.000 0.00 0.00 0.00 3.53
67 68 1.523758 GGTAGTGGCAGTTGTTGGAG 58.476 55.000 0.00 0.00 0.00 3.86
68 69 0.875059 GTAGTGGCAGTTGTTGGAGC 59.125 55.000 0.00 0.00 0.00 4.70
69 70 0.764890 TAGTGGCAGTTGTTGGAGCT 59.235 50.000 0.00 0.00 0.00 4.09
70 71 0.820891 AGTGGCAGTTGTTGGAGCTG 60.821 55.000 0.00 0.00 0.00 4.24
71 72 1.529010 TGGCAGTTGTTGGAGCTGG 60.529 57.895 0.00 0.00 0.00 4.85
72 73 1.529244 GGCAGTTGTTGGAGCTGGT 60.529 57.895 0.00 0.00 0.00 4.00
73 74 1.109323 GGCAGTTGTTGGAGCTGGTT 61.109 55.000 0.00 0.00 0.00 3.67
74 75 0.031178 GCAGTTGTTGGAGCTGGTTG 59.969 55.000 0.00 0.00 0.00 3.77
75 76 0.031178 CAGTTGTTGGAGCTGGTTGC 59.969 55.000 0.00 0.00 43.29 4.17
84 85 3.854856 GCTGGTTGCTTTGGTGGA 58.145 55.556 0.00 0.00 38.95 4.02
85 86 2.354902 GCTGGTTGCTTTGGTGGAT 58.645 52.632 0.00 0.00 38.95 3.41
86 87 0.037975 GCTGGTTGCTTTGGTGGATG 60.038 55.000 0.00 0.00 38.95 3.51
87 88 0.604578 CTGGTTGCTTTGGTGGATGG 59.395 55.000 0.00 0.00 0.00 3.51
88 89 0.105760 TGGTTGCTTTGGTGGATGGT 60.106 50.000 0.00 0.00 0.00 3.55
89 90 0.318120 GGTTGCTTTGGTGGATGGTG 59.682 55.000 0.00 0.00 0.00 4.17
90 91 0.318120 GTTGCTTTGGTGGATGGTGG 59.682 55.000 0.00 0.00 0.00 4.61
91 92 0.831288 TTGCTTTGGTGGATGGTGGG 60.831 55.000 0.00 0.00 0.00 4.61
92 93 1.984026 GCTTTGGTGGATGGTGGGG 60.984 63.158 0.00 0.00 0.00 4.96
93 94 1.773635 CTTTGGTGGATGGTGGGGA 59.226 57.895 0.00 0.00 0.00 4.81
94 95 0.611896 CTTTGGTGGATGGTGGGGAC 60.612 60.000 0.00 0.00 0.00 4.46
95 96 1.364317 TTTGGTGGATGGTGGGGACA 61.364 55.000 0.00 0.00 38.70 4.02
96 97 1.364317 TTGGTGGATGGTGGGGACAA 61.364 55.000 0.00 0.00 46.06 3.18
97 98 1.000896 GGTGGATGGTGGGGACAAG 60.001 63.158 0.00 0.00 46.06 3.16
98 99 1.000896 GTGGATGGTGGGGACAAGG 60.001 63.158 0.00 0.00 46.06 3.61
99 100 1.151699 TGGATGGTGGGGACAAGGA 60.152 57.895 0.00 0.00 46.06 3.36
100 101 0.552367 TGGATGGTGGGGACAAGGAT 60.552 55.000 0.00 0.00 46.06 3.24
118 119 2.035321 GGATGAAGATGGAGACGAGGAC 59.965 54.545 0.00 0.00 0.00 3.85
130 131 3.711086 AGACGAGGACGATTGATTGATG 58.289 45.455 0.00 0.00 42.66 3.07
132 133 1.528586 CGAGGACGATTGATTGATGGC 59.471 52.381 0.00 0.00 42.66 4.40
133 134 2.564771 GAGGACGATTGATTGATGGCA 58.435 47.619 0.00 0.00 0.00 4.92
135 136 3.559069 AGGACGATTGATTGATGGCATT 58.441 40.909 0.00 0.00 0.00 3.56
136 137 3.317149 AGGACGATTGATTGATGGCATTG 59.683 43.478 0.00 0.00 0.00 2.82
137 138 3.551454 GGACGATTGATTGATGGCATTGG 60.551 47.826 0.00 0.00 0.00 3.16
138 139 2.223876 ACGATTGATTGATGGCATTGGC 60.224 45.455 0.00 2.73 40.13 4.52
180 185 2.727647 CCGATAGTGCGCGCTCTC 60.728 66.667 35.71 25.28 0.00 3.20
207 212 2.562912 CACGGCACATGGCTTGTC 59.437 61.111 2.62 0.00 44.01 3.18
221 226 1.882352 GCTTGTCCCTGTCCGTTCAAT 60.882 52.381 0.00 0.00 0.00 2.57
223 228 0.762418 TGTCCCTGTCCGTTCAATGT 59.238 50.000 0.00 0.00 0.00 2.71
224 229 1.270625 TGTCCCTGTCCGTTCAATGTC 60.271 52.381 0.00 0.00 0.00 3.06
225 230 1.002087 GTCCCTGTCCGTTCAATGTCT 59.998 52.381 0.00 0.00 0.00 3.41
232 237 4.641396 TGTCCGTTCAATGTCTTCTGAAT 58.359 39.130 0.00 0.00 34.26 2.57
239 244 6.580041 CGTTCAATGTCTTCTGAATTCCAAAG 59.420 38.462 2.27 6.77 34.26 2.77
251 256 0.537188 TTCCAAAGGCGCCAAAACAA 59.463 45.000 31.54 12.73 0.00 2.83
274 279 0.249398 TTCGGAAGCCAAGGTCTAGC 59.751 55.000 0.00 0.00 0.00 3.42
277 282 2.125512 AAGCCAAGGTCTAGCGCG 60.126 61.111 0.00 0.00 0.00 6.86
289 294 2.131294 CTAGCGCGTAGGTAGCCAGG 62.131 65.000 8.43 0.00 43.01 4.45
306 311 3.458189 CCAGGGCTAGAAGAAATACACG 58.542 50.000 0.00 0.00 0.00 4.49
307 312 3.118738 CCAGGGCTAGAAGAAATACACGT 60.119 47.826 0.00 0.00 0.00 4.49
308 313 4.504858 CAGGGCTAGAAGAAATACACGTT 58.495 43.478 0.00 0.00 0.00 3.99
310 315 4.222145 AGGGCTAGAAGAAATACACGTTCA 59.778 41.667 0.00 0.00 0.00 3.18
313 335 6.238130 GGGCTAGAAGAAATACACGTTCATTC 60.238 42.308 0.00 0.00 0.00 2.67
326 348 5.049405 ACACGTTCATTCATCTGTTTTCTCC 60.049 40.000 0.00 0.00 0.00 3.71
333 355 6.881065 TCATTCATCTGTTTTCTCCGAAGAAT 59.119 34.615 0.00 0.00 41.12 2.40
334 356 7.391554 TCATTCATCTGTTTTCTCCGAAGAATT 59.608 33.333 0.00 0.00 41.12 2.17
335 357 7.510549 TTCATCTGTTTTCTCCGAAGAATTT 57.489 32.000 0.00 0.00 41.12 1.82
338 360 6.300354 TCTGTTTTCTCCGAAGAATTTGAC 57.700 37.500 0.00 0.00 41.12 3.18
339 361 5.820423 TCTGTTTTCTCCGAAGAATTTGACA 59.180 36.000 0.00 0.00 41.12 3.58
340 362 5.816919 TGTTTTCTCCGAAGAATTTGACAC 58.183 37.500 0.00 0.00 41.12 3.67
341 363 5.212934 GTTTTCTCCGAAGAATTTGACACC 58.787 41.667 0.00 0.00 41.12 4.16
342 364 3.053831 TCTCCGAAGAATTTGACACCC 57.946 47.619 0.00 0.00 0.00 4.61
343 365 2.637872 TCTCCGAAGAATTTGACACCCT 59.362 45.455 0.00 0.00 0.00 4.34
344 366 3.003480 CTCCGAAGAATTTGACACCCTC 58.997 50.000 0.00 0.00 0.00 4.30
345 367 1.732259 CCGAAGAATTTGACACCCTCG 59.268 52.381 0.00 0.00 0.00 4.63
346 368 1.128692 CGAAGAATTTGACACCCTCGC 59.871 52.381 0.00 0.00 0.00 5.03
347 369 2.427506 GAAGAATTTGACACCCTCGCT 58.572 47.619 0.00 0.00 0.00 4.93
348 370 2.100605 AGAATTTGACACCCTCGCTC 57.899 50.000 0.00 0.00 0.00 5.03
349 371 1.625818 AGAATTTGACACCCTCGCTCT 59.374 47.619 0.00 0.00 0.00 4.09
351 373 1.270907 ATTTGACACCCTCGCTCTCT 58.729 50.000 0.00 0.00 0.00 3.10
352 374 0.318441 TTTGACACCCTCGCTCTCTG 59.682 55.000 0.00 0.00 0.00 3.35
353 375 0.539669 TTGACACCCTCGCTCTCTGA 60.540 55.000 0.00 0.00 0.00 3.27
354 376 0.962855 TGACACCCTCGCTCTCTGAG 60.963 60.000 0.00 0.00 0.00 3.35
363 385 4.594367 CTCTCTGAGCAGCGCTTT 57.406 55.556 7.50 0.00 39.88 3.51
364 386 2.079874 CTCTCTGAGCAGCGCTTTG 58.920 57.895 7.50 0.00 39.88 2.77
365 387 0.389556 CTCTCTGAGCAGCGCTTTGA 60.390 55.000 7.50 0.45 39.88 2.69
366 388 0.033920 TCTCTGAGCAGCGCTTTGAA 59.966 50.000 7.50 0.00 39.88 2.69
369 391 0.385223 CTGAGCAGCGCTTTGAACAC 60.385 55.000 7.50 0.00 39.88 3.32
370 392 1.439365 GAGCAGCGCTTTGAACACG 60.439 57.895 7.50 0.00 39.88 4.49
372 394 1.298339 GCAGCGCTTTGAACACGTT 60.298 52.632 7.50 0.00 0.00 3.99
374 396 1.298339 AGCGCTTTGAACACGTTGC 60.298 52.632 2.64 0.00 0.00 4.17
375 397 2.626151 GCGCTTTGAACACGTTGCG 61.626 57.895 0.00 7.70 45.12 4.85
380 402 4.583254 TGAACACGTTGCGCGCAC 62.583 61.111 36.72 26.27 46.11 5.34
386 408 4.088762 CGTTGCGCGCACCTTCAT 62.089 61.111 36.72 0.00 0.00 2.57
387 409 2.255252 GTTGCGCGCACCTTCATT 59.745 55.556 36.72 0.00 0.00 2.57
388 410 1.499949 GTTGCGCGCACCTTCATTA 59.500 52.632 36.72 14.49 0.00 1.90
389 411 0.521242 GTTGCGCGCACCTTCATTAG 60.521 55.000 36.72 0.00 0.00 1.73
392 414 1.084370 GCGCGCACCTTCATTAGTCT 61.084 55.000 29.10 0.00 0.00 3.24
393 415 1.359848 CGCGCACCTTCATTAGTCTT 58.640 50.000 8.75 0.00 0.00 3.01
395 417 2.222819 CGCGCACCTTCATTAGTCTTTC 60.223 50.000 8.75 0.00 0.00 2.62
396 418 3.003480 GCGCACCTTCATTAGTCTTTCT 58.997 45.455 0.30 0.00 0.00 2.52
398 420 4.499183 CGCACCTTCATTAGTCTTTCTCT 58.501 43.478 0.00 0.00 0.00 3.10
399 421 4.932200 CGCACCTTCATTAGTCTTTCTCTT 59.068 41.667 0.00 0.00 0.00 2.85
402 424 6.652900 GCACCTTCATTAGTCTTTCTCTTTCT 59.347 38.462 0.00 0.00 0.00 2.52
405 427 8.432805 ACCTTCATTAGTCTTTCTCTTTCTGAA 58.567 33.333 0.00 0.00 0.00 3.02
406 428 9.277783 CCTTCATTAGTCTTTCTCTTTCTGAAA 57.722 33.333 2.44 2.44 33.15 2.69
431 460 3.815856 TCCAGAAAATTGTTTGCAGCA 57.184 38.095 0.00 0.00 0.00 4.41
434 463 4.059511 CCAGAAAATTGTTTGCAGCATCA 58.940 39.130 0.00 0.00 0.00 3.07
435 464 4.151689 CCAGAAAATTGTTTGCAGCATCAG 59.848 41.667 0.00 0.00 0.00 2.90
436 465 4.986034 CAGAAAATTGTTTGCAGCATCAGA 59.014 37.500 0.00 0.00 0.00 3.27
437 466 5.637810 CAGAAAATTGTTTGCAGCATCAGAT 59.362 36.000 0.00 0.00 0.00 2.90
438 467 6.147164 CAGAAAATTGTTTGCAGCATCAGATT 59.853 34.615 0.00 0.52 0.00 2.40
439 468 6.367969 AGAAAATTGTTTGCAGCATCAGATTC 59.632 34.615 0.00 5.49 0.00 2.52
440 469 4.794278 ATTGTTTGCAGCATCAGATTCA 57.206 36.364 0.00 0.00 0.00 2.57
442 471 4.168922 TGTTTGCAGCATCAGATTCAAG 57.831 40.909 0.00 0.00 0.00 3.02
444 473 4.038282 TGTTTGCAGCATCAGATTCAAGTT 59.962 37.500 0.00 0.00 0.00 2.66
447 476 3.439129 TGCAGCATCAGATTCAAGTTCAG 59.561 43.478 0.00 0.00 0.00 3.02
449 478 4.633126 GCAGCATCAGATTCAAGTTCAGTA 59.367 41.667 0.00 0.00 0.00 2.74
450 479 5.220624 GCAGCATCAGATTCAAGTTCAGTAG 60.221 44.000 0.00 0.00 0.00 2.57
452 481 6.592994 CAGCATCAGATTCAAGTTCAGTAGAA 59.407 38.462 0.00 0.00 0.00 2.10
453 482 7.118825 CAGCATCAGATTCAAGTTCAGTAGAAA 59.881 37.037 0.00 0.00 35.08 2.52
454 483 7.663081 AGCATCAGATTCAAGTTCAGTAGAAAA 59.337 33.333 0.00 0.00 35.08 2.29
455 484 8.292448 GCATCAGATTCAAGTTCAGTAGAAAAA 58.708 33.333 0.00 0.00 35.08 1.94
456 485 9.604626 CATCAGATTCAAGTTCAGTAGAAAAAC 57.395 33.333 0.00 0.00 35.08 2.43
457 486 8.154649 TCAGATTCAAGTTCAGTAGAAAAACC 57.845 34.615 0.00 0.00 35.08 3.27
458 487 7.042051 TCAGATTCAAGTTCAGTAGAAAAACCG 60.042 37.037 0.00 0.00 35.08 4.44
459 488 4.806342 TCAAGTTCAGTAGAAAAACCGC 57.194 40.909 0.00 0.00 35.08 5.68
460 489 4.448210 TCAAGTTCAGTAGAAAAACCGCT 58.552 39.130 0.00 0.00 35.08 5.52
461 490 5.603596 TCAAGTTCAGTAGAAAAACCGCTA 58.396 37.500 0.00 0.00 35.08 4.26
462 491 5.464389 TCAAGTTCAGTAGAAAAACCGCTAC 59.536 40.000 0.00 0.00 37.77 3.58
463 492 5.211174 AGTTCAGTAGAAAAACCGCTACT 57.789 39.130 0.00 0.00 46.01 2.57
464 493 6.336842 AGTTCAGTAGAAAAACCGCTACTA 57.663 37.500 0.00 0.00 43.95 1.82
465 494 6.388278 AGTTCAGTAGAAAAACCGCTACTAG 58.612 40.000 0.00 0.00 43.95 2.57
466 495 5.972107 TCAGTAGAAAAACCGCTACTAGT 57.028 39.130 0.00 0.00 43.95 2.57
467 496 7.175641 AGTTCAGTAGAAAAACCGCTACTAGTA 59.824 37.037 1.89 1.89 43.95 1.82
468 497 7.081526 TCAGTAGAAAAACCGCTACTAGTAG 57.918 40.000 23.25 23.25 43.95 2.57
469 498 6.656693 TCAGTAGAAAAACCGCTACTAGTAGT 59.343 38.462 26.76 8.14 43.95 2.73
470 499 7.824289 TCAGTAGAAAAACCGCTACTAGTAGTA 59.176 37.037 26.76 9.66 43.95 1.82
471 500 7.907563 CAGTAGAAAAACCGCTACTAGTAGTAC 59.092 40.741 26.76 18.06 43.95 2.73
472 501 6.824305 AGAAAAACCGCTACTAGTAGTACA 57.176 37.500 26.76 0.00 35.65 2.90
473 502 7.401955 AGAAAAACCGCTACTAGTAGTACAT 57.598 36.000 26.76 11.77 35.65 2.29
474 503 7.256286 AGAAAAACCGCTACTAGTAGTACATG 58.744 38.462 26.76 15.01 35.65 3.21
475 504 6.764308 AAAACCGCTACTAGTAGTACATGA 57.236 37.500 26.76 0.00 35.65 3.07
476 505 6.956202 AAACCGCTACTAGTAGTACATGAT 57.044 37.500 26.76 8.75 35.65 2.45
477 506 8.455903 AAAACCGCTACTAGTAGTACATGATA 57.544 34.615 26.76 0.00 35.65 2.15
478 507 8.632906 AAACCGCTACTAGTAGTACATGATAT 57.367 34.615 26.76 6.37 35.65 1.63
479 508 8.632906 AACCGCTACTAGTAGTACATGATATT 57.367 34.615 26.76 9.33 35.65 1.28
480 509 8.266392 ACCGCTACTAGTAGTACATGATATTC 57.734 38.462 26.76 8.31 35.65 1.75
481 510 7.881751 ACCGCTACTAGTAGTACATGATATTCA 59.118 37.037 26.76 0.00 35.65 2.57
482 511 8.391859 CCGCTACTAGTAGTACATGATATTCAG 58.608 40.741 26.76 3.16 35.65 3.02
483 512 8.937884 CGCTACTAGTAGTACATGATATTCAGT 58.062 37.037 26.76 0.00 35.65 3.41
495 524 7.983307 ACATGATATTCAGTTTCTTCTCAAGC 58.017 34.615 0.00 0.00 0.00 4.01
496 525 7.609146 ACATGATATTCAGTTTCTTCTCAAGCA 59.391 33.333 0.00 0.00 0.00 3.91
497 526 7.984422 TGATATTCAGTTTCTTCTCAAGCAA 57.016 32.000 0.00 0.00 0.00 3.91
498 527 7.810658 TGATATTCAGTTTCTTCTCAAGCAAC 58.189 34.615 0.00 0.00 35.31 4.17
499 528 4.536364 TTCAGTTTCTTCTCAAGCAACG 57.464 40.909 0.00 0.00 39.22 4.10
500 529 2.287915 TCAGTTTCTTCTCAAGCAACGC 59.712 45.455 0.00 0.00 39.22 4.84
501 530 1.261619 AGTTTCTTCTCAAGCAACGCG 59.738 47.619 3.53 3.53 39.22 6.01
502 531 1.003866 GTTTCTTCTCAAGCAACGCGT 60.004 47.619 5.58 5.58 0.00 6.01
503 532 0.859232 TTCTTCTCAAGCAACGCGTC 59.141 50.000 14.44 0.00 0.00 5.19
504 533 1.128611 CTTCTCAAGCAACGCGTCG 59.871 57.895 14.44 0.56 0.00 5.12
505 534 2.802346 CTTCTCAAGCAACGCGTCGC 62.802 60.000 15.75 15.75 0.00 5.19
506 535 3.406361 CTCAAGCAACGCGTCGCT 61.406 61.111 20.93 20.93 41.20 4.93
507 536 3.340721 CTCAAGCAACGCGTCGCTC 62.341 63.158 26.87 8.49 37.54 5.03
508 537 4.759893 CAAGCAACGCGTCGCTCG 62.760 66.667 26.87 11.30 37.54 5.03
512 541 3.524759 CAACGCGTCGCTCGTCTC 61.525 66.667 14.44 0.00 39.48 3.36
513 542 3.724403 AACGCGTCGCTCGTCTCT 61.724 61.111 14.44 0.00 39.48 3.10
514 543 3.648315 AACGCGTCGCTCGTCTCTC 62.648 63.158 14.44 0.00 39.48 3.20
515 544 4.148645 CGCGTCGCTCGTCTCTCA 62.149 66.667 16.36 0.00 42.13 3.27
516 545 2.405594 GCGTCGCTCGTCTCTCAT 59.594 61.111 10.68 0.00 42.13 2.90
517 546 1.652930 GCGTCGCTCGTCTCTCATC 60.653 63.158 10.68 0.00 42.13 2.92
518 547 1.716172 CGTCGCTCGTCTCTCATCA 59.284 57.895 0.00 0.00 34.52 3.07
519 548 0.097150 CGTCGCTCGTCTCTCATCAA 59.903 55.000 0.00 0.00 34.52 2.57
520 549 1.540407 GTCGCTCGTCTCTCATCAAC 58.460 55.000 0.00 0.00 0.00 3.18
521 550 1.131504 GTCGCTCGTCTCTCATCAACT 59.868 52.381 0.00 0.00 0.00 3.16
522 551 1.131315 TCGCTCGTCTCTCATCAACTG 59.869 52.381 0.00 0.00 0.00 3.16
523 552 1.276415 GCTCGTCTCTCATCAACTGC 58.724 55.000 0.00 0.00 0.00 4.40
524 553 1.135141 GCTCGTCTCTCATCAACTGCT 60.135 52.381 0.00 0.00 0.00 4.24
525 554 2.796304 CTCGTCTCTCATCAACTGCTC 58.204 52.381 0.00 0.00 0.00 4.26
526 555 2.162681 TCGTCTCTCATCAACTGCTCA 58.837 47.619 0.00 0.00 0.00 4.26
527 556 2.757314 TCGTCTCTCATCAACTGCTCAT 59.243 45.455 0.00 0.00 0.00 2.90
528 557 3.194329 TCGTCTCTCATCAACTGCTCATT 59.806 43.478 0.00 0.00 0.00 2.57
529 558 3.551082 CGTCTCTCATCAACTGCTCATTC 59.449 47.826 0.00 0.00 0.00 2.67
530 559 3.870419 GTCTCTCATCAACTGCTCATTCC 59.130 47.826 0.00 0.00 0.00 3.01
531 560 3.773667 TCTCTCATCAACTGCTCATTCCT 59.226 43.478 0.00 0.00 0.00 3.36
532 561 3.870274 TCTCATCAACTGCTCATTCCTG 58.130 45.455 0.00 0.00 0.00 3.86
533 562 2.355132 CTCATCAACTGCTCATTCCTGC 59.645 50.000 0.00 0.00 0.00 4.85
534 563 1.063616 CATCAACTGCTCATTCCTGCG 59.936 52.381 0.00 0.00 0.00 5.18
535 564 1.136147 CAACTGCTCATTCCTGCGC 59.864 57.895 0.00 0.00 33.64 6.09
536 565 2.393768 AACTGCTCATTCCTGCGCG 61.394 57.895 0.00 0.00 35.84 6.86
537 566 3.570638 CTGCTCATTCCTGCGCGG 61.571 66.667 9.96 9.96 35.84 6.46
549 578 4.771812 GCGCGGCGTCGTTTCTTC 62.772 66.667 24.46 0.00 38.89 2.87
569 598 0.034767 TCAAGATTCAGCTGGCCTGG 60.035 55.000 15.13 6.43 42.05 4.45
584 613 1.066143 GCCTGGCACTACACACTACAT 60.066 52.381 15.17 0.00 0.00 2.29
585 614 2.167693 GCCTGGCACTACACACTACATA 59.832 50.000 15.17 0.00 0.00 2.29
586 615 3.782046 CCTGGCACTACACACTACATAC 58.218 50.000 0.00 0.00 0.00 2.39
587 616 3.447586 CCTGGCACTACACACTACATACT 59.552 47.826 0.00 0.00 0.00 2.12
588 617 4.643334 CCTGGCACTACACACTACATACTA 59.357 45.833 0.00 0.00 0.00 1.82
590 619 5.957798 TGGCACTACACACTACATACTAAC 58.042 41.667 0.00 0.00 0.00 2.34
591 620 5.477637 TGGCACTACACACTACATACTAACA 59.522 40.000 0.00 0.00 0.00 2.41
592 621 5.803967 GGCACTACACACTACATACTAACAC 59.196 44.000 0.00 0.00 0.00 3.32
593 622 6.349944 GGCACTACACACTACATACTAACACT 60.350 42.308 0.00 0.00 0.00 3.55
594 623 6.527023 GCACTACACACTACATACTAACACTG 59.473 42.308 0.00 0.00 0.00 3.66
595 624 7.591165 CACTACACACTACATACTAACACTGT 58.409 38.462 0.00 0.00 0.00 3.55
596 625 7.749570 CACTACACACTACATACTAACACTGTC 59.250 40.741 0.00 0.00 0.00 3.51
597 626 6.644248 ACACACTACATACTAACACTGTCA 57.356 37.500 0.00 0.00 0.00 3.58
598 627 6.678878 ACACACTACATACTAACACTGTCAG 58.321 40.000 0.00 0.00 0.00 3.51
599 628 6.264744 ACACACTACATACTAACACTGTCAGT 59.735 38.462 0.00 0.00 0.00 3.41
600 629 7.446319 ACACACTACATACTAACACTGTCAGTA 59.554 37.037 4.85 0.00 0.00 2.74
601 630 8.459635 CACACTACATACTAACACTGTCAGTAT 58.540 37.037 4.85 0.00 36.21 2.12
606 635 7.101652 CATACTAACACTGTCAGTATGGACT 57.898 40.000 19.32 0.00 44.24 3.85
618 647 2.110213 TGGACTGGCCACGTGAAC 59.890 61.111 19.30 9.89 43.33 3.18
619 648 2.668550 GGACTGGCCACGTGAACC 60.669 66.667 19.30 18.37 36.34 3.62
620 649 2.668550 GACTGGCCACGTGAACCC 60.669 66.667 19.30 14.48 0.00 4.11
621 650 4.619227 ACTGGCCACGTGAACCCG 62.619 66.667 19.30 16.27 0.00 5.28
622 651 4.308458 CTGGCCACGTGAACCCGA 62.308 66.667 19.30 2.38 0.00 5.14
623 652 3.818121 CTGGCCACGTGAACCCGAA 62.818 63.158 19.30 1.65 0.00 4.30
624 653 2.592287 GGCCACGTGAACCCGAAA 60.592 61.111 19.30 0.00 0.00 3.46
625 654 2.613506 GGCCACGTGAACCCGAAAG 61.614 63.158 19.30 0.00 0.00 2.62
626 655 1.595929 GCCACGTGAACCCGAAAGA 60.596 57.895 19.30 0.00 0.00 2.52
627 656 1.161563 GCCACGTGAACCCGAAAGAA 61.162 55.000 19.30 0.00 0.00 2.52
628 657 1.301423 CCACGTGAACCCGAAAGAAA 58.699 50.000 19.30 0.00 0.00 2.52
629 658 1.003223 CCACGTGAACCCGAAAGAAAC 60.003 52.381 19.30 0.00 0.00 2.78
630 659 1.666700 CACGTGAACCCGAAAGAAACA 59.333 47.619 10.90 0.00 0.00 2.83
631 660 1.937899 ACGTGAACCCGAAAGAAACAG 59.062 47.619 0.00 0.00 0.00 3.16
632 661 1.263217 CGTGAACCCGAAAGAAACAGG 59.737 52.381 0.00 0.00 0.00 4.00
633 662 2.294979 GTGAACCCGAAAGAAACAGGT 58.705 47.619 0.00 0.00 0.00 4.00
634 663 3.469739 GTGAACCCGAAAGAAACAGGTA 58.530 45.455 0.00 0.00 0.00 3.08
635 664 3.878699 GTGAACCCGAAAGAAACAGGTAA 59.121 43.478 0.00 0.00 0.00 2.85
636 665 4.024302 GTGAACCCGAAAGAAACAGGTAAG 60.024 45.833 0.00 0.00 0.00 2.34
637 666 2.501261 ACCCGAAAGAAACAGGTAAGC 58.499 47.619 0.00 0.00 0.00 3.09
638 667 2.105993 ACCCGAAAGAAACAGGTAAGCT 59.894 45.455 0.00 0.00 0.00 3.74
639 668 3.146847 CCCGAAAGAAACAGGTAAGCTT 58.853 45.455 3.48 3.48 0.00 3.74
640 669 3.058224 CCCGAAAGAAACAGGTAAGCTTG 60.058 47.826 9.86 0.00 0.00 4.01
641 670 3.058224 CCGAAAGAAACAGGTAAGCTTGG 60.058 47.826 9.86 0.00 0.00 3.61
642 671 3.564225 CGAAAGAAACAGGTAAGCTTGGT 59.436 43.478 9.86 0.00 0.00 3.67
643 672 4.554723 CGAAAGAAACAGGTAAGCTTGGTG 60.555 45.833 9.86 6.11 0.00 4.17
644 673 2.230660 AGAAACAGGTAAGCTTGGTGC 58.769 47.619 9.86 0.00 43.29 5.01
654 683 3.621953 GCTTGGTGCTGAGAGTTCT 57.378 52.632 0.00 0.00 38.95 3.01
655 684 2.751166 GCTTGGTGCTGAGAGTTCTA 57.249 50.000 0.00 0.00 38.95 2.10
656 685 3.258971 GCTTGGTGCTGAGAGTTCTAT 57.741 47.619 0.00 0.00 38.95 1.98
657 686 2.935201 GCTTGGTGCTGAGAGTTCTATG 59.065 50.000 0.00 0.00 38.95 2.23
658 687 3.529533 CTTGGTGCTGAGAGTTCTATGG 58.470 50.000 0.00 0.00 0.00 2.74
659 688 2.820178 TGGTGCTGAGAGTTCTATGGA 58.180 47.619 0.00 0.00 0.00 3.41
660 689 2.762887 TGGTGCTGAGAGTTCTATGGAG 59.237 50.000 0.00 0.00 0.00 3.86
661 690 2.763448 GGTGCTGAGAGTTCTATGGAGT 59.237 50.000 0.00 0.00 0.00 3.85
662 691 3.954904 GGTGCTGAGAGTTCTATGGAGTA 59.045 47.826 0.00 0.00 0.00 2.59
663 692 4.202070 GGTGCTGAGAGTTCTATGGAGTAC 60.202 50.000 0.00 0.00 0.00 2.73
664 693 4.642885 GTGCTGAGAGTTCTATGGAGTACT 59.357 45.833 0.00 0.00 36.13 2.73
665 694 4.642437 TGCTGAGAGTTCTATGGAGTACTG 59.358 45.833 0.00 0.00 33.78 2.74
666 695 4.499019 GCTGAGAGTTCTATGGAGTACTGC 60.499 50.000 7.56 7.56 33.78 4.40
667 696 3.628032 TGAGAGTTCTATGGAGTACTGCG 59.372 47.826 10.02 0.00 33.78 5.18
668 697 3.878103 GAGAGTTCTATGGAGTACTGCGA 59.122 47.826 10.02 0.00 33.78 5.10
669 698 4.465886 AGAGTTCTATGGAGTACTGCGAT 58.534 43.478 10.02 7.14 33.78 4.58
670 699 5.622180 AGAGTTCTATGGAGTACTGCGATA 58.378 41.667 10.02 7.85 33.78 2.92
671 700 5.470777 AGAGTTCTATGGAGTACTGCGATAC 59.529 44.000 10.02 3.79 33.78 2.24
672 701 5.131067 AGTTCTATGGAGTACTGCGATACA 58.869 41.667 10.02 0.00 32.51 2.29
685 714 4.625972 TGCGATACAGAGAAATACGTCA 57.374 40.909 0.00 0.00 0.00 4.35
686 715 4.598062 TGCGATACAGAGAAATACGTCAG 58.402 43.478 0.00 0.00 0.00 3.51
687 716 4.095932 TGCGATACAGAGAAATACGTCAGT 59.904 41.667 0.00 0.00 0.00 3.41
688 717 4.671516 GCGATACAGAGAAATACGTCAGTC 59.328 45.833 0.00 0.00 0.00 3.51
689 718 5.729732 GCGATACAGAGAAATACGTCAGTCA 60.730 44.000 0.00 0.00 0.00 3.41
690 719 6.255950 CGATACAGAGAAATACGTCAGTCAA 58.744 40.000 0.00 0.00 0.00 3.18
691 720 6.745907 CGATACAGAGAAATACGTCAGTCAAA 59.254 38.462 0.00 0.00 0.00 2.69
692 721 7.044641 CGATACAGAGAAATACGTCAGTCAAAG 60.045 40.741 0.00 0.00 0.00 2.77
693 722 4.686554 ACAGAGAAATACGTCAGTCAAAGC 59.313 41.667 0.00 0.00 0.00 3.51
694 723 4.686091 CAGAGAAATACGTCAGTCAAAGCA 59.314 41.667 0.00 0.00 0.00 3.91
695 724 4.926238 AGAGAAATACGTCAGTCAAAGCAG 59.074 41.667 0.00 0.00 0.00 4.24
696 725 4.883083 AGAAATACGTCAGTCAAAGCAGA 58.117 39.130 0.00 0.00 0.00 4.26
697 726 5.297547 AGAAATACGTCAGTCAAAGCAGAA 58.702 37.500 0.00 0.00 0.00 3.02
698 727 5.406780 AGAAATACGTCAGTCAAAGCAGAAG 59.593 40.000 0.00 0.00 0.00 2.85
699 728 1.221414 ACGTCAGTCAAAGCAGAAGC 58.779 50.000 0.00 0.00 42.56 3.86
700 729 1.220529 CGTCAGTCAAAGCAGAAGCA 58.779 50.000 0.00 0.00 45.49 3.91
701 730 1.194098 CGTCAGTCAAAGCAGAAGCAG 59.806 52.381 0.00 0.00 45.49 4.24
702 731 1.069364 GTCAGTCAAAGCAGAAGCAGC 60.069 52.381 0.00 0.00 45.49 5.25
703 732 0.949397 CAGTCAAAGCAGAAGCAGCA 59.051 50.000 0.00 0.00 45.49 4.41
704 733 1.069159 CAGTCAAAGCAGAAGCAGCAG 60.069 52.381 0.00 0.00 45.49 4.24
705 734 0.950116 GTCAAAGCAGAAGCAGCAGT 59.050 50.000 0.00 0.00 45.49 4.40
706 735 2.146342 GTCAAAGCAGAAGCAGCAGTA 58.854 47.619 0.00 0.00 45.49 2.74
707 736 2.549754 GTCAAAGCAGAAGCAGCAGTAA 59.450 45.455 0.00 0.00 45.49 2.24
708 737 3.003689 GTCAAAGCAGAAGCAGCAGTAAA 59.996 43.478 0.00 0.00 45.49 2.01
709 738 3.003689 TCAAAGCAGAAGCAGCAGTAAAC 59.996 43.478 0.00 0.00 45.49 2.01
710 739 1.151668 AGCAGAAGCAGCAGTAAACG 58.848 50.000 0.00 0.00 45.49 3.60
711 740 0.166814 GCAGAAGCAGCAGTAAACGG 59.833 55.000 0.00 0.00 41.58 4.44
712 741 0.798776 CAGAAGCAGCAGTAAACGGG 59.201 55.000 0.00 0.00 0.00 5.28
713 742 0.396811 AGAAGCAGCAGTAAACGGGT 59.603 50.000 0.00 0.00 0.00 5.28
714 743 0.517316 GAAGCAGCAGTAAACGGGTG 59.483 55.000 7.88 7.88 41.32 4.61
715 744 0.107831 AAGCAGCAGTAAACGGGTGA 59.892 50.000 15.06 0.00 40.97 4.02
716 745 0.602905 AGCAGCAGTAAACGGGTGAC 60.603 55.000 15.06 7.44 40.97 3.67
733 762 3.759527 TGACCGTCGTCAGATTAGAAG 57.240 47.619 0.00 0.00 44.20 2.85
734 763 3.340928 TGACCGTCGTCAGATTAGAAGA 58.659 45.455 0.00 0.00 44.20 2.87
735 764 3.374367 TGACCGTCGTCAGATTAGAAGAG 59.626 47.826 0.00 0.00 44.20 2.85
736 765 2.097791 ACCGTCGTCAGATTAGAAGAGC 59.902 50.000 0.00 0.00 0.00 4.09
737 766 2.356382 CCGTCGTCAGATTAGAAGAGCT 59.644 50.000 0.00 0.00 0.00 4.09
738 767 3.358775 CGTCGTCAGATTAGAAGAGCTG 58.641 50.000 0.00 0.00 0.00 4.24
739 768 3.064134 CGTCGTCAGATTAGAAGAGCTGA 59.936 47.826 0.00 0.00 35.22 4.26
740 769 4.437524 CGTCGTCAGATTAGAAGAGCTGAA 60.438 45.833 0.00 0.00 38.92 3.02
741 770 5.587289 GTCGTCAGATTAGAAGAGCTGAAT 58.413 41.667 0.00 0.00 38.92 2.57
742 771 5.685511 GTCGTCAGATTAGAAGAGCTGAATC 59.314 44.000 0.00 0.00 38.92 2.52
749 778 2.709213 AGAAGAGCTGAATCTGGCAAC 58.291 47.619 0.00 0.00 0.00 4.17
1013 1077 6.592994 CAGAAGTGTCATATGTCAGTGTTGAT 59.407 38.462 10.48 0.00 35.39 2.57
1228 1292 0.371989 TGAAGTTTGTGCGTGTGTCG 59.628 50.000 0.00 0.00 43.12 4.35
1269 1333 7.067981 GCTCTTGACTTGGGAAATGATAAGATT 59.932 37.037 0.00 0.00 0.00 2.40
1599 1827 9.683069 ACAAAAATTGTGAGCTTAGAAATACAG 57.317 29.630 0.00 0.00 43.48 2.74
1600 1828 9.683069 CAAAAATTGTGAGCTTAGAAATACAGT 57.317 29.630 0.00 0.00 0.00 3.55
1604 1832 9.890629 AATTGTGAGCTTAGAAATACAGTATCA 57.109 29.630 0.00 0.00 0.00 2.15
1711 1951 2.868583 CCGCCATGAGTGACTGATAAAG 59.131 50.000 0.00 0.00 0.00 1.85
1725 1965 7.972277 GTGACTGATAAAGACAATGCATGAATT 59.028 33.333 0.00 0.00 32.26 2.17
1750 1993 4.946157 AGAGACAAGCATTTATCCCAACTG 59.054 41.667 0.00 0.00 0.00 3.16
1751 1994 4.922206 AGACAAGCATTTATCCCAACTGA 58.078 39.130 0.00 0.00 0.00 3.41
1768 2011 2.747989 ACTGAAGCATGAACATGAGCAG 59.252 45.455 17.40 18.76 41.20 4.24
1772 2015 0.809385 GCATGAACATGAGCAGCACT 59.191 50.000 17.40 0.00 41.20 4.40
1798 2041 5.946942 TTCTCTCATTACAATCTCCAGCT 57.053 39.130 0.00 0.00 0.00 4.24
1820 2063 4.510167 AGGTTACTCTACGGCTACCTAA 57.490 45.455 0.00 0.00 34.39 2.69
1828 2071 3.867723 CGGCTACCTAATCAGACGG 57.132 57.895 0.00 0.00 39.68 4.79
1830 2073 0.750850 GGCTACCTAATCAGACGGCA 59.249 55.000 0.00 0.00 0.00 5.69
1831 2074 1.138266 GGCTACCTAATCAGACGGCAA 59.862 52.381 0.00 0.00 0.00 4.52
1832 2075 2.474816 GCTACCTAATCAGACGGCAAG 58.525 52.381 0.00 0.00 0.00 4.01
1833 2076 2.803492 GCTACCTAATCAGACGGCAAGG 60.803 54.545 0.00 0.00 0.00 3.61
1834 2077 1.276622 ACCTAATCAGACGGCAAGGT 58.723 50.000 0.00 0.00 32.52 3.50
1835 2078 1.628846 ACCTAATCAGACGGCAAGGTT 59.371 47.619 0.00 0.00 33.59 3.50
1836 2079 2.039879 ACCTAATCAGACGGCAAGGTTT 59.960 45.455 0.00 0.00 33.59 3.27
1837 2080 2.678336 CCTAATCAGACGGCAAGGTTTC 59.322 50.000 0.00 0.00 0.00 2.78
1838 2081 1.534729 AATCAGACGGCAAGGTTTCC 58.465 50.000 0.00 0.00 0.00 3.13
1839 2082 0.400213 ATCAGACGGCAAGGTTTCCA 59.600 50.000 0.00 0.00 0.00 3.53
1840 2083 0.534203 TCAGACGGCAAGGTTTCCAC 60.534 55.000 0.00 0.00 0.00 4.02
1841 2084 1.228154 AGACGGCAAGGTTTCCACC 60.228 57.895 0.00 0.00 44.67 4.61
1842 2085 2.203437 ACGGCAAGGTTTCCACCC 60.203 61.111 0.00 0.00 45.63 4.61
1843 2086 2.989253 CGGCAAGGTTTCCACCCC 60.989 66.667 0.00 0.00 45.63 4.95
1844 2087 2.603473 GGCAAGGTTTCCACCCCC 60.603 66.667 0.00 0.00 45.63 5.40
1845 2088 2.526110 GCAAGGTTTCCACCCCCT 59.474 61.111 0.00 0.00 45.63 4.79
1846 2089 1.152333 GCAAGGTTTCCACCCCCTT 60.152 57.895 0.00 0.00 45.63 3.95
1922 2384 2.417586 GGTTGGACGAAATAAACCCTCG 59.582 50.000 0.00 0.00 36.81 4.63
1927 2389 3.319755 GACGAAATAAACCCTCGTGTCA 58.680 45.455 0.49 0.00 45.25 3.58
1942 2404 2.742053 CGTGTCAAAATCCCAGTCGATT 59.258 45.455 0.00 0.00 33.84 3.34
1950 2430 1.746615 CCCAGTCGATTGCACCCTG 60.747 63.158 1.73 0.00 0.00 4.45
1951 2431 1.296392 CCAGTCGATTGCACCCTGA 59.704 57.895 1.73 0.00 0.00 3.86
1954 2434 2.086869 CAGTCGATTGCACCCTGAAAT 58.913 47.619 0.00 0.00 0.00 2.17
1955 2435 3.270027 CAGTCGATTGCACCCTGAAATA 58.730 45.455 0.00 0.00 0.00 1.40
1956 2436 3.879295 CAGTCGATTGCACCCTGAAATAT 59.121 43.478 0.00 0.00 0.00 1.28
1957 2437 5.056480 CAGTCGATTGCACCCTGAAATATA 58.944 41.667 0.00 0.00 0.00 0.86
1958 2438 5.050091 CAGTCGATTGCACCCTGAAATATAC 60.050 44.000 0.00 0.00 0.00 1.47
1960 2440 5.295787 GTCGATTGCACCCTGAAATATACAA 59.704 40.000 0.00 0.00 0.00 2.41
1961 2441 6.017109 GTCGATTGCACCCTGAAATATACAAT 60.017 38.462 0.00 0.00 0.00 2.71
1962 2442 6.204688 TCGATTGCACCCTGAAATATACAATC 59.795 38.462 0.00 0.00 39.01 2.67
1963 2443 6.568462 CGATTGCACCCTGAAATATACAATCC 60.568 42.308 0.00 0.00 39.13 3.01
1964 2444 4.469657 TGCACCCTGAAATATACAATCCC 58.530 43.478 0.00 0.00 0.00 3.85
1965 2445 3.502211 GCACCCTGAAATATACAATCCCG 59.498 47.826 0.00 0.00 0.00 5.14
1966 2446 4.072131 CACCCTGAAATATACAATCCCGG 58.928 47.826 0.00 0.00 0.00 5.73
1967 2447 3.720002 ACCCTGAAATATACAATCCCGGT 59.280 43.478 0.00 0.00 0.00 5.28
1968 2448 4.202430 ACCCTGAAATATACAATCCCGGTC 60.202 45.833 0.00 0.00 0.00 4.79
1969 2449 4.041691 CCCTGAAATATACAATCCCGGTCT 59.958 45.833 0.00 0.00 0.00 3.85
1970 2450 5.247564 CCCTGAAATATACAATCCCGGTCTA 59.752 44.000 0.00 0.00 0.00 2.59
1971 2451 6.239772 CCCTGAAATATACAATCCCGGTCTAA 60.240 42.308 0.00 0.00 0.00 2.10
1972 2452 7.221450 CCTGAAATATACAATCCCGGTCTAAA 58.779 38.462 0.00 0.00 0.00 1.85
1973 2453 7.883311 CCTGAAATATACAATCCCGGTCTAAAT 59.117 37.037 0.00 0.00 0.00 1.40
1974 2454 9.284968 CTGAAATATACAATCCCGGTCTAAATT 57.715 33.333 0.00 0.00 0.00 1.82
1975 2455 9.062524 TGAAATATACAATCCCGGTCTAAATTG 57.937 33.333 0.00 5.07 35.68 2.32
1976 2456 9.280174 GAAATATACAATCCCGGTCTAAATTGA 57.720 33.333 0.00 0.00 34.12 2.57
1977 2457 9.635404 AAATATACAATCCCGGTCTAAATTGAA 57.365 29.630 0.00 0.00 34.12 2.69
1978 2458 6.937436 ATACAATCCCGGTCTAAATTGAAC 57.063 37.500 0.00 0.00 34.12 3.18
1979 2459 4.014406 ACAATCCCGGTCTAAATTGAACC 58.986 43.478 0.00 0.00 34.12 3.62
1980 2460 4.013728 CAATCCCGGTCTAAATTGAACCA 58.986 43.478 0.00 0.00 32.14 3.67
1981 2461 4.519906 ATCCCGGTCTAAATTGAACCAT 57.480 40.909 0.00 0.00 0.00 3.55
2014 2829 3.749665 TTTCCAAACAGGGATTGCAAG 57.250 42.857 4.94 0.00 36.67 4.01
2034 2856 0.521735 GGATGCCCAGTTCAACGTTC 59.478 55.000 0.00 0.00 0.00 3.95
2070 2892 2.919807 GCGAGGCTCAGCAAAAGAAAAG 60.920 50.000 20.90 0.63 0.00 2.27
2100 3131 4.211374 GGGCACAACTAAATATGCGACTAG 59.789 45.833 0.00 0.00 39.02 2.57
2114 3145 4.439968 TGCGACTAGAGAGATTCGAACTA 58.560 43.478 0.00 0.00 33.20 2.24
2115 3146 4.874396 TGCGACTAGAGAGATTCGAACTAA 59.126 41.667 0.00 0.00 33.20 2.24
2116 3147 5.006844 TGCGACTAGAGAGATTCGAACTAAG 59.993 44.000 0.00 0.00 33.20 2.18
2125 3156 3.260128 AGATTCGAACTAAGGACGGGTTT 59.740 43.478 0.00 0.00 0.00 3.27
2177 3208 5.235616 GGTCGACTTAAGTCAATTGTGAACA 59.764 40.000 29.95 0.61 44.99 3.18
2189 3220 5.872070 TCAATTGTGAACAAAAAGGACAACC 59.128 36.000 5.13 0.00 39.55 3.77
2193 3224 3.082548 TGAACAAAAAGGACAACCGACA 58.917 40.909 0.00 0.00 41.83 4.35
2204 3235 5.425630 AGGACAACCGACATATTTAACCTC 58.574 41.667 0.00 0.00 41.83 3.85
2396 3429 9.545611 TTTCACGAGTTTTGTAAGAAACTTAAC 57.454 29.630 4.70 0.00 46.73 2.01
2488 3524 6.758254 GAGAATCATCTAGCTAAGGAGCTTT 58.242 40.000 4.53 0.00 46.55 3.51
2501 3537 6.019559 GCTAAGGAGCTTTCACAAACAAAAAG 60.020 38.462 0.00 0.00 45.98 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.485206 CAGATTCAAATGAAATGGAGAAAACTT 57.515 29.630 0.00 0.00 37.61 2.66
3 4 7.601508 GCAGATTCAAATGAAATGGAGAAAACT 59.398 33.333 0.00 0.00 37.61 2.66
4 5 7.385752 TGCAGATTCAAATGAAATGGAGAAAAC 59.614 33.333 0.00 0.00 37.61 2.43
6 7 6.995364 TGCAGATTCAAATGAAATGGAGAAA 58.005 32.000 0.00 0.00 37.61 2.52
7 8 6.593268 TGCAGATTCAAATGAAATGGAGAA 57.407 33.333 0.00 0.00 37.61 2.87
8 9 6.350696 CCTTGCAGATTCAAATGAAATGGAGA 60.351 38.462 0.00 0.00 37.61 3.71
9 10 5.810587 CCTTGCAGATTCAAATGAAATGGAG 59.189 40.000 0.00 0.10 37.61 3.86
10 11 5.481122 TCCTTGCAGATTCAAATGAAATGGA 59.519 36.000 0.00 1.50 37.61 3.41
11 12 5.579511 GTCCTTGCAGATTCAAATGAAATGG 59.420 40.000 0.00 0.00 37.61 3.16
12 13 6.310467 CAGTCCTTGCAGATTCAAATGAAATG 59.690 38.462 0.00 4.05 37.61 2.32
13 14 6.395629 CAGTCCTTGCAGATTCAAATGAAAT 58.604 36.000 0.00 0.00 37.61 2.17
14 15 5.775686 CAGTCCTTGCAGATTCAAATGAAA 58.224 37.500 0.00 0.00 37.61 2.69
15 16 5.381174 CAGTCCTTGCAGATTCAAATGAA 57.619 39.130 0.00 0.00 38.56 2.57
29 30 1.596954 CCGTTCGTTTTGCAGTCCTTG 60.597 52.381 0.00 0.00 0.00 3.61
30 31 0.661020 CCGTTCGTTTTGCAGTCCTT 59.339 50.000 0.00 0.00 0.00 3.36
31 32 0.463116 ACCGTTCGTTTTGCAGTCCT 60.463 50.000 0.00 0.00 0.00 3.85
32 33 1.193874 CTACCGTTCGTTTTGCAGTCC 59.806 52.381 0.00 0.00 0.00 3.85
33 34 1.862827 ACTACCGTTCGTTTTGCAGTC 59.137 47.619 0.00 0.00 0.00 3.51
34 35 1.595794 CACTACCGTTCGTTTTGCAGT 59.404 47.619 0.00 0.00 0.00 4.40
35 36 1.070175 CCACTACCGTTCGTTTTGCAG 60.070 52.381 0.00 0.00 0.00 4.41
36 37 0.938713 CCACTACCGTTCGTTTTGCA 59.061 50.000 0.00 0.00 0.00 4.08
37 38 0.385098 GCCACTACCGTTCGTTTTGC 60.385 55.000 0.00 0.00 0.00 3.68
38 39 0.938713 TGCCACTACCGTTCGTTTTG 59.061 50.000 0.00 0.00 0.00 2.44
39 40 1.223187 CTGCCACTACCGTTCGTTTT 58.777 50.000 0.00 0.00 0.00 2.43
40 41 0.105408 ACTGCCACTACCGTTCGTTT 59.895 50.000 0.00 0.00 0.00 3.60
41 42 0.105408 AACTGCCACTACCGTTCGTT 59.895 50.000 0.00 0.00 0.00 3.85
42 43 0.599204 CAACTGCCACTACCGTTCGT 60.599 55.000 0.00 0.00 0.00 3.85
43 44 0.599204 ACAACTGCCACTACCGTTCG 60.599 55.000 0.00 0.00 0.00 3.95
44 45 1.263217 CAACAACTGCCACTACCGTTC 59.737 52.381 0.00 0.00 0.00 3.95
45 46 1.305201 CAACAACTGCCACTACCGTT 58.695 50.000 0.00 0.00 0.00 4.44
46 47 0.534203 CCAACAACTGCCACTACCGT 60.534 55.000 0.00 0.00 0.00 4.83
47 48 0.250124 TCCAACAACTGCCACTACCG 60.250 55.000 0.00 0.00 0.00 4.02
48 49 1.523758 CTCCAACAACTGCCACTACC 58.476 55.000 0.00 0.00 0.00 3.18
49 50 0.875059 GCTCCAACAACTGCCACTAC 59.125 55.000 0.00 0.00 0.00 2.73
50 51 0.764890 AGCTCCAACAACTGCCACTA 59.235 50.000 0.00 0.00 0.00 2.74
51 52 0.820891 CAGCTCCAACAACTGCCACT 60.821 55.000 0.00 0.00 0.00 4.00
52 53 1.656441 CAGCTCCAACAACTGCCAC 59.344 57.895 0.00 0.00 0.00 5.01
53 54 1.529010 CCAGCTCCAACAACTGCCA 60.529 57.895 0.00 0.00 0.00 4.92
54 55 1.109323 AACCAGCTCCAACAACTGCC 61.109 55.000 0.00 0.00 0.00 4.85
55 56 0.031178 CAACCAGCTCCAACAACTGC 59.969 55.000 0.00 0.00 0.00 4.40
56 57 0.031178 GCAACCAGCTCCAACAACTG 59.969 55.000 0.00 0.00 41.15 3.16
57 58 2.419057 GCAACCAGCTCCAACAACT 58.581 52.632 0.00 0.00 41.15 3.16
67 68 0.037975 CATCCACCAAAGCAACCAGC 60.038 55.000 0.00 0.00 46.19 4.85
68 69 0.604578 CCATCCACCAAAGCAACCAG 59.395 55.000 0.00 0.00 0.00 4.00
69 70 0.105760 ACCATCCACCAAAGCAACCA 60.106 50.000 0.00 0.00 0.00 3.67
70 71 0.318120 CACCATCCACCAAAGCAACC 59.682 55.000 0.00 0.00 0.00 3.77
71 72 0.318120 CCACCATCCACCAAAGCAAC 59.682 55.000 0.00 0.00 0.00 4.17
72 73 0.831288 CCCACCATCCACCAAAGCAA 60.831 55.000 0.00 0.00 0.00 3.91
73 74 1.228831 CCCACCATCCACCAAAGCA 60.229 57.895 0.00 0.00 0.00 3.91
74 75 1.984026 CCCCACCATCCACCAAAGC 60.984 63.158 0.00 0.00 0.00 3.51
75 76 0.611896 GTCCCCACCATCCACCAAAG 60.612 60.000 0.00 0.00 0.00 2.77
76 77 1.364317 TGTCCCCACCATCCACCAAA 61.364 55.000 0.00 0.00 0.00 3.28
77 78 1.364317 TTGTCCCCACCATCCACCAA 61.364 55.000 0.00 0.00 0.00 3.67
78 79 1.776293 TTGTCCCCACCATCCACCA 60.776 57.895 0.00 0.00 0.00 4.17
79 80 1.000896 CTTGTCCCCACCATCCACC 60.001 63.158 0.00 0.00 0.00 4.61
80 81 1.000896 CCTTGTCCCCACCATCCAC 60.001 63.158 0.00 0.00 0.00 4.02
81 82 0.552367 ATCCTTGTCCCCACCATCCA 60.552 55.000 0.00 0.00 0.00 3.41
82 83 0.106519 CATCCTTGTCCCCACCATCC 60.107 60.000 0.00 0.00 0.00 3.51
83 84 0.918983 TCATCCTTGTCCCCACCATC 59.081 55.000 0.00 0.00 0.00 3.51
84 85 1.285962 CTTCATCCTTGTCCCCACCAT 59.714 52.381 0.00 0.00 0.00 3.55
85 86 0.698238 CTTCATCCTTGTCCCCACCA 59.302 55.000 0.00 0.00 0.00 4.17
86 87 0.991920 TCTTCATCCTTGTCCCCACC 59.008 55.000 0.00 0.00 0.00 4.61
87 88 2.648059 CATCTTCATCCTTGTCCCCAC 58.352 52.381 0.00 0.00 0.00 4.61
88 89 1.565759 CCATCTTCATCCTTGTCCCCA 59.434 52.381 0.00 0.00 0.00 4.96
89 90 1.846439 TCCATCTTCATCCTTGTCCCC 59.154 52.381 0.00 0.00 0.00 4.81
90 91 2.774234 TCTCCATCTTCATCCTTGTCCC 59.226 50.000 0.00 0.00 0.00 4.46
91 92 3.739519 CGTCTCCATCTTCATCCTTGTCC 60.740 52.174 0.00 0.00 0.00 4.02
92 93 3.131223 TCGTCTCCATCTTCATCCTTGTC 59.869 47.826 0.00 0.00 0.00 3.18
93 94 3.099905 TCGTCTCCATCTTCATCCTTGT 58.900 45.455 0.00 0.00 0.00 3.16
94 95 3.492309 CCTCGTCTCCATCTTCATCCTTG 60.492 52.174 0.00 0.00 0.00 3.61
95 96 2.697751 CCTCGTCTCCATCTTCATCCTT 59.302 50.000 0.00 0.00 0.00 3.36
96 97 2.091610 TCCTCGTCTCCATCTTCATCCT 60.092 50.000 0.00 0.00 0.00 3.24
97 98 2.035321 GTCCTCGTCTCCATCTTCATCC 59.965 54.545 0.00 0.00 0.00 3.51
98 99 2.287308 CGTCCTCGTCTCCATCTTCATC 60.287 54.545 0.00 0.00 0.00 2.92
99 100 1.678627 CGTCCTCGTCTCCATCTTCAT 59.321 52.381 0.00 0.00 0.00 2.57
100 101 1.095600 CGTCCTCGTCTCCATCTTCA 58.904 55.000 0.00 0.00 0.00 3.02
118 119 2.223852 TGCCAATGCCATCAATCAATCG 60.224 45.455 0.00 0.00 36.33 3.34
130 131 3.304721 TGTGCCACTGCCAATGCC 61.305 61.111 0.00 0.00 36.33 4.40
132 133 2.256158 CGTGTGCCACTGCCAATG 59.744 61.111 0.00 0.00 36.33 2.82
133 134 2.985282 CCGTGTGCCACTGCCAAT 60.985 61.111 0.00 0.00 36.33 3.16
136 137 3.818121 TACACCGTGTGCCACTGCC 62.818 63.158 14.66 0.00 36.98 4.85
137 138 1.440938 TTTACACCGTGTGCCACTGC 61.441 55.000 14.66 0.00 36.98 4.40
138 139 0.586319 CTTTACACCGTGTGCCACTG 59.414 55.000 14.66 0.64 36.98 3.66
174 179 2.829003 TGGCGTAGAGGGAGAGCG 60.829 66.667 0.00 0.00 0.00 5.03
180 185 4.814294 GTGCCGTGGCGTAGAGGG 62.814 72.222 6.37 0.00 45.51 4.30
207 212 2.076863 GAAGACATTGAACGGACAGGG 58.923 52.381 0.00 0.00 0.00 4.45
221 226 2.813754 CGCCTTTGGAATTCAGAAGACA 59.186 45.455 17.03 0.00 0.00 3.41
223 228 1.812571 GCGCCTTTGGAATTCAGAAGA 59.187 47.619 17.03 0.00 0.00 2.87
224 229 1.135286 GGCGCCTTTGGAATTCAGAAG 60.135 52.381 22.15 9.94 0.00 2.85
225 230 0.887933 GGCGCCTTTGGAATTCAGAA 59.112 50.000 22.15 0.34 0.00 3.02
232 237 0.537188 TTGTTTTGGCGCCTTTGGAA 59.463 45.000 29.70 10.44 0.00 3.53
239 244 1.212455 CGAAAGGTTGTTTTGGCGCC 61.212 55.000 22.73 22.73 0.00 6.53
274 279 4.587189 GCCCTGGCTACCTACGCG 62.587 72.222 3.53 3.53 38.26 6.01
289 294 6.312918 TGAATGAACGTGTATTTCTTCTAGCC 59.687 38.462 0.00 0.00 0.00 3.93
296 301 7.672983 AACAGATGAATGAACGTGTATTTCT 57.327 32.000 0.00 0.00 0.00 2.52
297 302 8.728088 AAAACAGATGAATGAACGTGTATTTC 57.272 30.769 0.00 0.00 0.00 2.17
299 304 8.099364 AGAAAACAGATGAATGAACGTGTATT 57.901 30.769 0.00 0.00 0.00 1.89
300 305 7.148407 GGAGAAAACAGATGAATGAACGTGTAT 60.148 37.037 0.00 0.00 0.00 2.29
301 306 6.147164 GGAGAAAACAGATGAATGAACGTGTA 59.853 38.462 0.00 0.00 0.00 2.90
302 307 5.049405 GGAGAAAACAGATGAATGAACGTGT 60.049 40.000 0.00 0.00 0.00 4.49
306 311 5.862924 TCGGAGAAAACAGATGAATGAAC 57.137 39.130 0.00 0.00 0.00 3.18
307 312 6.230472 TCTTCGGAGAAAACAGATGAATGAA 58.770 36.000 0.00 0.00 45.90 2.57
308 313 5.793817 TCTTCGGAGAAAACAGATGAATGA 58.206 37.500 0.00 0.00 45.90 2.57
310 315 7.693969 AATTCTTCGGAGAAAACAGATGAAT 57.306 32.000 10.91 0.00 44.61 2.57
313 335 6.798959 GTCAAATTCTTCGGAGAAAACAGATG 59.201 38.462 10.91 4.04 44.61 2.90
326 348 1.128692 GCGAGGGTGTCAAATTCTTCG 59.871 52.381 0.00 0.00 0.00 3.79
333 355 0.318441 CAGAGAGCGAGGGTGTCAAA 59.682 55.000 0.00 0.00 0.00 2.69
334 356 0.539669 TCAGAGAGCGAGGGTGTCAA 60.540 55.000 0.00 0.00 0.00 3.18
335 357 0.962855 CTCAGAGAGCGAGGGTGTCA 60.963 60.000 0.00 0.00 0.00 3.58
338 360 2.493973 GCTCAGAGAGCGAGGGTG 59.506 66.667 0.00 0.00 45.85 4.61
346 368 0.389556 TCAAAGCGCTGCTCAGAGAG 60.390 55.000 12.58 0.00 38.25 3.20
347 369 0.033920 TTCAAAGCGCTGCTCAGAGA 59.966 50.000 12.58 0.00 38.25 3.10
348 370 0.165511 GTTCAAAGCGCTGCTCAGAG 59.834 55.000 12.58 0.00 38.25 3.35
349 371 0.532640 TGTTCAAAGCGCTGCTCAGA 60.533 50.000 12.58 1.56 38.25 3.27
351 373 1.648720 GTGTTCAAAGCGCTGCTCA 59.351 52.632 12.58 3.65 38.25 4.26
352 374 1.439365 CGTGTTCAAAGCGCTGCTC 60.439 57.895 12.58 0.65 38.25 4.26
353 375 1.714899 AACGTGTTCAAAGCGCTGCT 61.715 50.000 12.58 0.00 42.56 4.24
354 376 1.298339 AACGTGTTCAAAGCGCTGC 60.298 52.632 12.58 0.00 0.00 5.25
355 377 1.531522 GCAACGTGTTCAAAGCGCTG 61.532 55.000 12.58 0.00 0.00 5.18
356 378 1.298339 GCAACGTGTTCAAAGCGCT 60.298 52.632 2.64 2.64 0.00 5.92
357 379 2.626151 CGCAACGTGTTCAAAGCGC 61.626 57.895 0.00 0.00 38.68 5.92
358 380 2.626151 GCGCAACGTGTTCAAAGCG 61.626 57.895 0.30 9.85 46.99 4.68
359 381 2.626151 CGCGCAACGTGTTCAAAGC 61.626 57.895 8.75 0.00 36.87 3.51
360 382 2.626151 GCGCGCAACGTGTTCAAAG 61.626 57.895 29.10 0.00 46.11 2.77
363 385 4.583254 GTGCGCGCAACGTGTTCA 62.583 61.111 38.24 6.62 46.11 3.18
370 392 0.521242 CTAATGAAGGTGCGCGCAAC 60.521 55.000 40.59 40.59 0.00 4.17
372 394 1.358725 GACTAATGAAGGTGCGCGCA 61.359 55.000 33.09 33.09 0.00 6.09
374 396 1.359848 AAGACTAATGAAGGTGCGCG 58.640 50.000 0.00 0.00 0.00 6.86
375 397 3.003480 AGAAAGACTAATGAAGGTGCGC 58.997 45.455 0.00 0.00 0.00 6.09
380 402 8.839310 TTCAGAAAGAGAAAGACTAATGAAGG 57.161 34.615 0.00 0.00 0.00 3.46
406 428 6.095160 TGCTGCAAACAATTTTCTGGATTTTT 59.905 30.769 0.00 0.00 0.00 1.94
407 429 5.589452 TGCTGCAAACAATTTTCTGGATTTT 59.411 32.000 0.00 0.00 0.00 1.82
408 430 5.124645 TGCTGCAAACAATTTTCTGGATTT 58.875 33.333 0.00 0.00 0.00 2.17
409 431 4.706035 TGCTGCAAACAATTTTCTGGATT 58.294 34.783 0.00 0.00 0.00 3.01
410 432 4.339872 TGCTGCAAACAATTTTCTGGAT 57.660 36.364 0.00 0.00 0.00 3.41
411 433 3.815856 TGCTGCAAACAATTTTCTGGA 57.184 38.095 0.00 0.00 0.00 3.86
413 435 4.986034 TCTGATGCTGCAAACAATTTTCTG 59.014 37.500 6.36 1.34 0.00 3.02
414 436 5.204409 TCTGATGCTGCAAACAATTTTCT 57.796 34.783 6.36 0.00 0.00 2.52
415 437 6.146510 TGAATCTGATGCTGCAAACAATTTTC 59.853 34.615 6.36 12.34 0.00 2.29
425 454 3.414269 TGAACTTGAATCTGATGCTGCA 58.586 40.909 4.13 4.13 0.00 4.41
427 456 6.104665 TCTACTGAACTTGAATCTGATGCTG 58.895 40.000 0.00 0.00 0.00 4.41
428 457 6.291648 TCTACTGAACTTGAATCTGATGCT 57.708 37.500 0.00 0.00 0.00 3.79
431 460 8.787852 GGTTTTTCTACTGAACTTGAATCTGAT 58.212 33.333 0.00 0.00 31.02 2.90
434 463 6.293462 GCGGTTTTTCTACTGAACTTGAATCT 60.293 38.462 0.00 0.00 31.02 2.40
435 464 5.851703 GCGGTTTTTCTACTGAACTTGAATC 59.148 40.000 0.00 0.00 31.02 2.52
436 465 5.531287 AGCGGTTTTTCTACTGAACTTGAAT 59.469 36.000 0.00 0.00 31.02 2.57
437 466 4.879545 AGCGGTTTTTCTACTGAACTTGAA 59.120 37.500 0.00 0.00 31.02 2.69
438 467 4.448210 AGCGGTTTTTCTACTGAACTTGA 58.552 39.130 0.00 0.00 31.02 3.02
439 468 4.813296 AGCGGTTTTTCTACTGAACTTG 57.187 40.909 0.00 0.00 31.02 3.16
440 469 5.608449 AGTAGCGGTTTTTCTACTGAACTT 58.392 37.500 0.00 0.00 42.62 2.66
442 471 6.155136 ACTAGTAGCGGTTTTTCTACTGAAC 58.845 40.000 11.03 0.00 43.64 3.18
444 473 5.972107 ACTAGTAGCGGTTTTTCTACTGA 57.028 39.130 11.03 0.00 43.64 3.41
447 476 7.752695 TGTACTACTAGTAGCGGTTTTTCTAC 58.247 38.462 26.54 17.99 36.66 2.59
449 478 6.824305 TGTACTACTAGTAGCGGTTTTTCT 57.176 37.500 26.54 9.04 36.66 2.52
450 479 7.253422 TCATGTACTACTAGTAGCGGTTTTTC 58.747 38.462 26.54 7.53 36.66 2.29
452 481 6.764308 TCATGTACTACTAGTAGCGGTTTT 57.236 37.500 26.54 11.01 36.66 2.43
453 482 6.956202 ATCATGTACTACTAGTAGCGGTTT 57.044 37.500 26.54 11.67 36.66 3.27
454 483 8.632906 AATATCATGTACTACTAGTAGCGGTT 57.367 34.615 26.54 12.01 36.66 4.44
455 484 7.881751 TGAATATCATGTACTACTAGTAGCGGT 59.118 37.037 26.54 13.07 36.66 5.68
456 485 8.265165 TGAATATCATGTACTACTAGTAGCGG 57.735 38.462 26.54 13.27 36.66 5.52
457 486 8.937884 ACTGAATATCATGTACTACTAGTAGCG 58.062 37.037 26.54 12.17 36.66 4.26
469 498 9.102757 GCTTGAGAAGAAACTGAATATCATGTA 57.897 33.333 0.00 0.00 0.00 2.29
470 499 7.609146 TGCTTGAGAAGAAACTGAATATCATGT 59.391 33.333 0.00 0.00 0.00 3.21
471 500 7.982224 TGCTTGAGAAGAAACTGAATATCATG 58.018 34.615 0.00 0.00 0.00 3.07
472 501 8.457261 GTTGCTTGAGAAGAAACTGAATATCAT 58.543 33.333 0.59 0.00 42.68 2.45
473 502 7.360353 CGTTGCTTGAGAAGAAACTGAATATCA 60.360 37.037 5.79 0.00 43.61 2.15
474 503 6.958193 CGTTGCTTGAGAAGAAACTGAATATC 59.042 38.462 5.79 0.00 43.61 1.63
475 504 6.621596 GCGTTGCTTGAGAAGAAACTGAATAT 60.622 38.462 5.79 0.00 43.61 1.28
476 505 5.334105 GCGTTGCTTGAGAAGAAACTGAATA 60.334 40.000 5.79 0.00 43.61 1.75
477 506 4.555511 GCGTTGCTTGAGAAGAAACTGAAT 60.556 41.667 5.79 0.00 43.61 2.57
478 507 3.242739 GCGTTGCTTGAGAAGAAACTGAA 60.243 43.478 5.79 0.00 43.61 3.02
479 508 2.287915 GCGTTGCTTGAGAAGAAACTGA 59.712 45.455 5.79 0.00 43.61 3.41
480 509 2.644078 GCGTTGCTTGAGAAGAAACTG 58.356 47.619 5.79 1.74 43.61 3.16
481 510 1.261619 CGCGTTGCTTGAGAAGAAACT 59.738 47.619 0.00 0.00 43.61 2.66
482 511 1.003866 ACGCGTTGCTTGAGAAGAAAC 60.004 47.619 5.58 0.00 42.57 2.78
483 512 1.260561 GACGCGTTGCTTGAGAAGAAA 59.739 47.619 15.53 0.00 0.00 2.52
484 513 0.859232 GACGCGTTGCTTGAGAAGAA 59.141 50.000 15.53 0.00 0.00 2.52
485 514 1.275471 CGACGCGTTGCTTGAGAAGA 61.275 55.000 15.53 0.00 0.00 2.87
486 515 1.128611 CGACGCGTTGCTTGAGAAG 59.871 57.895 15.53 0.00 0.00 2.85
487 516 2.938823 GCGACGCGTTGCTTGAGAA 61.939 57.895 37.84 0.00 37.03 2.87
488 517 3.403057 GCGACGCGTTGCTTGAGA 61.403 61.111 37.84 0.00 37.03 3.27
495 524 3.524759 GAGACGAGCGACGCGTTG 61.525 66.667 22.38 22.38 46.94 4.10
496 525 3.648315 GAGAGACGAGCGACGCGTT 62.648 63.158 15.53 0.00 46.94 4.84
497 526 4.149970 GAGAGACGAGCGACGCGT 62.150 66.667 13.85 13.85 46.94 6.01
498 527 3.441808 ATGAGAGACGAGCGACGCG 62.442 63.158 15.18 3.53 46.94 6.01
499 528 1.652930 GATGAGAGACGAGCGACGC 60.653 63.158 13.03 13.03 46.94 5.19
501 530 1.131504 AGTTGATGAGAGACGAGCGAC 59.868 52.381 0.00 0.00 0.00 5.19
502 531 1.131315 CAGTTGATGAGAGACGAGCGA 59.869 52.381 0.00 0.00 0.00 4.93
503 532 1.543614 CAGTTGATGAGAGACGAGCG 58.456 55.000 0.00 0.00 0.00 5.03
504 533 1.135141 AGCAGTTGATGAGAGACGAGC 60.135 52.381 0.00 0.00 0.00 5.03
505 534 2.163211 TGAGCAGTTGATGAGAGACGAG 59.837 50.000 0.00 0.00 0.00 4.18
506 535 2.162681 TGAGCAGTTGATGAGAGACGA 58.837 47.619 0.00 0.00 0.00 4.20
507 536 2.643933 TGAGCAGTTGATGAGAGACG 57.356 50.000 0.00 0.00 0.00 4.18
508 537 3.870419 GGAATGAGCAGTTGATGAGAGAC 59.130 47.826 0.00 0.00 0.00 3.36
509 538 3.773667 AGGAATGAGCAGTTGATGAGAGA 59.226 43.478 0.00 0.00 0.00 3.10
510 539 3.872182 CAGGAATGAGCAGTTGATGAGAG 59.128 47.826 0.00 0.00 0.00 3.20
511 540 3.870274 CAGGAATGAGCAGTTGATGAGA 58.130 45.455 0.00 0.00 0.00 3.27
512 541 2.355132 GCAGGAATGAGCAGTTGATGAG 59.645 50.000 0.00 0.00 0.00 2.90
513 542 2.362736 GCAGGAATGAGCAGTTGATGA 58.637 47.619 0.00 0.00 0.00 2.92
514 543 1.063616 CGCAGGAATGAGCAGTTGATG 59.936 52.381 0.00 0.00 0.00 3.07
515 544 1.376543 CGCAGGAATGAGCAGTTGAT 58.623 50.000 0.00 0.00 0.00 2.57
516 545 1.300971 GCGCAGGAATGAGCAGTTGA 61.301 55.000 0.30 0.00 34.74 3.18
517 546 1.136147 GCGCAGGAATGAGCAGTTG 59.864 57.895 0.30 0.00 34.74 3.16
518 547 2.393768 CGCGCAGGAATGAGCAGTT 61.394 57.895 8.75 0.00 34.25 3.16
519 548 2.816958 CGCGCAGGAATGAGCAGT 60.817 61.111 8.75 0.00 34.25 4.40
520 549 3.570638 CCGCGCAGGAATGAGCAG 61.571 66.667 8.75 0.00 45.00 4.24
532 561 4.771812 GAAGAAACGACGCCGCGC 62.772 66.667 13.88 0.00 39.95 6.86
533 562 3.055905 GAGAAGAAACGACGCCGCG 62.056 63.158 12.14 12.14 39.95 6.46
534 563 1.554042 TTGAGAAGAAACGACGCCGC 61.554 55.000 0.00 0.00 39.95 6.53
535 564 0.435008 CTTGAGAAGAAACGACGCCG 59.565 55.000 0.00 0.00 42.50 6.46
536 565 1.779569 TCTTGAGAAGAAACGACGCC 58.220 50.000 0.00 0.00 33.83 5.68
537 566 3.428870 TGAATCTTGAGAAGAAACGACGC 59.571 43.478 0.00 0.00 41.63 5.19
538 567 4.433544 GCTGAATCTTGAGAAGAAACGACG 60.434 45.833 0.00 0.00 41.63 5.12
539 568 4.688413 AGCTGAATCTTGAGAAGAAACGAC 59.312 41.667 0.00 0.00 41.63 4.34
540 569 4.687948 CAGCTGAATCTTGAGAAGAAACGA 59.312 41.667 8.42 0.00 41.63 3.85
541 570 4.142945 CCAGCTGAATCTTGAGAAGAAACG 60.143 45.833 17.39 0.00 41.63 3.60
542 571 4.379290 GCCAGCTGAATCTTGAGAAGAAAC 60.379 45.833 17.39 0.00 41.63 2.78
549 578 1.380524 CAGGCCAGCTGAATCTTGAG 58.619 55.000 17.39 0.00 0.00 3.02
569 598 6.527023 CAGTGTTAGTATGTAGTGTGTAGTGC 59.473 42.308 0.00 0.00 0.00 4.40
601 630 2.110213 GTTCACGTGGCCAGTCCA 59.890 61.111 17.00 0.00 44.18 4.02
602 631 2.668550 GGTTCACGTGGCCAGTCC 60.669 66.667 17.00 0.64 0.00 3.85
603 632 2.668550 GGGTTCACGTGGCCAGTC 60.669 66.667 24.19 0.00 0.00 3.51
604 633 4.619227 CGGGTTCACGTGGCCAGT 62.619 66.667 24.19 3.37 0.00 4.00
605 634 3.818121 TTCGGGTTCACGTGGCCAG 62.818 63.158 24.19 21.30 34.94 4.85
606 635 3.402095 TTTCGGGTTCACGTGGCCA 62.402 57.895 24.19 0.00 34.94 5.36
607 636 2.592287 TTTCGGGTTCACGTGGCC 60.592 61.111 17.00 17.51 34.94 5.36
608 637 1.161563 TTCTTTCGGGTTCACGTGGC 61.162 55.000 17.00 9.07 34.94 5.01
609 638 1.003223 GTTTCTTTCGGGTTCACGTGG 60.003 52.381 17.00 0.00 34.94 4.94
610 639 1.666700 TGTTTCTTTCGGGTTCACGTG 59.333 47.619 9.94 9.94 34.94 4.49
611 640 1.937899 CTGTTTCTTTCGGGTTCACGT 59.062 47.619 0.00 0.00 34.94 4.49
612 641 1.263217 CCTGTTTCTTTCGGGTTCACG 59.737 52.381 0.00 0.00 0.00 4.35
613 642 2.294979 ACCTGTTTCTTTCGGGTTCAC 58.705 47.619 0.00 0.00 41.20 3.18
614 643 2.721425 ACCTGTTTCTTTCGGGTTCA 57.279 45.000 0.00 0.00 41.20 3.18
615 644 3.058432 GCTTACCTGTTTCTTTCGGGTTC 60.058 47.826 1.74 0.00 43.38 3.62
616 645 2.882761 GCTTACCTGTTTCTTTCGGGTT 59.117 45.455 1.74 0.00 43.38 4.11
617 646 2.105993 AGCTTACCTGTTTCTTTCGGGT 59.894 45.455 2.06 2.06 45.28 5.28
618 647 2.779506 AGCTTACCTGTTTCTTTCGGG 58.220 47.619 0.00 0.00 37.36 5.14
619 648 3.058224 CCAAGCTTACCTGTTTCTTTCGG 60.058 47.826 0.00 0.00 0.00 4.30
620 649 3.564225 ACCAAGCTTACCTGTTTCTTTCG 59.436 43.478 0.00 0.00 0.00 3.46
621 650 4.793028 GCACCAAGCTTACCTGTTTCTTTC 60.793 45.833 0.00 0.00 41.15 2.62
622 651 3.068165 GCACCAAGCTTACCTGTTTCTTT 59.932 43.478 0.00 0.00 41.15 2.52
623 652 2.623416 GCACCAAGCTTACCTGTTTCTT 59.377 45.455 0.00 0.00 41.15 2.52
624 653 2.230660 GCACCAAGCTTACCTGTTTCT 58.769 47.619 0.00 0.00 41.15 2.52
625 654 2.706555 GCACCAAGCTTACCTGTTTC 57.293 50.000 0.00 0.00 41.15 2.78
636 665 2.751166 TAGAACTCTCAGCACCAAGC 57.249 50.000 0.00 0.00 46.19 4.01
637 666 3.196469 TCCATAGAACTCTCAGCACCAAG 59.804 47.826 0.00 0.00 0.00 3.61
638 667 3.173151 TCCATAGAACTCTCAGCACCAA 58.827 45.455 0.00 0.00 0.00 3.67
639 668 2.762887 CTCCATAGAACTCTCAGCACCA 59.237 50.000 0.00 0.00 0.00 4.17
640 669 2.763448 ACTCCATAGAACTCTCAGCACC 59.237 50.000 0.00 0.00 0.00 5.01
641 670 4.642885 AGTACTCCATAGAACTCTCAGCAC 59.357 45.833 0.00 0.00 0.00 4.40
642 671 4.642437 CAGTACTCCATAGAACTCTCAGCA 59.358 45.833 0.00 0.00 0.00 4.41
643 672 4.499019 GCAGTACTCCATAGAACTCTCAGC 60.499 50.000 0.00 0.00 0.00 4.26
644 673 4.260990 CGCAGTACTCCATAGAACTCTCAG 60.261 50.000 0.00 0.00 0.00 3.35
645 674 3.628032 CGCAGTACTCCATAGAACTCTCA 59.372 47.826 0.00 0.00 0.00 3.27
646 675 3.878103 TCGCAGTACTCCATAGAACTCTC 59.122 47.826 0.00 0.00 0.00 3.20
647 676 3.887352 TCGCAGTACTCCATAGAACTCT 58.113 45.455 0.00 0.00 0.00 3.24
648 677 4.839668 ATCGCAGTACTCCATAGAACTC 57.160 45.455 0.00 0.00 0.00 3.01
649 678 5.131067 TGTATCGCAGTACTCCATAGAACT 58.869 41.667 0.00 0.00 0.00 3.01
650 679 5.238868 TCTGTATCGCAGTACTCCATAGAAC 59.761 44.000 0.00 0.00 45.23 3.01
651 680 5.374071 TCTGTATCGCAGTACTCCATAGAA 58.626 41.667 0.00 0.00 45.23 2.10
652 681 4.969484 TCTGTATCGCAGTACTCCATAGA 58.031 43.478 0.00 0.00 45.23 1.98
653 682 4.998033 TCTCTGTATCGCAGTACTCCATAG 59.002 45.833 0.00 0.00 45.23 2.23
654 683 4.969484 TCTCTGTATCGCAGTACTCCATA 58.031 43.478 0.00 0.00 45.23 2.74
655 684 3.821748 TCTCTGTATCGCAGTACTCCAT 58.178 45.455 0.00 0.00 45.23 3.41
656 685 3.277142 TCTCTGTATCGCAGTACTCCA 57.723 47.619 0.00 0.00 45.23 3.86
657 686 4.634184 TTTCTCTGTATCGCAGTACTCC 57.366 45.455 0.00 0.00 45.23 3.85
658 687 5.846994 CGTATTTCTCTGTATCGCAGTACTC 59.153 44.000 0.00 0.00 45.23 2.59
659 688 5.296283 ACGTATTTCTCTGTATCGCAGTACT 59.704 40.000 0.00 0.00 45.23 2.73
660 689 5.508872 ACGTATTTCTCTGTATCGCAGTAC 58.491 41.667 0.00 0.00 45.23 2.73
661 690 5.295045 TGACGTATTTCTCTGTATCGCAGTA 59.705 40.000 0.00 0.00 45.23 2.74
662 691 4.095932 TGACGTATTTCTCTGTATCGCAGT 59.904 41.667 0.00 0.00 45.23 4.40
663 692 4.598062 TGACGTATTTCTCTGTATCGCAG 58.402 43.478 0.00 0.00 46.34 5.18
664 693 4.095932 ACTGACGTATTTCTCTGTATCGCA 59.904 41.667 0.00 0.00 0.00 5.10
665 694 4.599047 ACTGACGTATTTCTCTGTATCGC 58.401 43.478 0.00 0.00 0.00 4.58
666 695 5.807344 TGACTGACGTATTTCTCTGTATCG 58.193 41.667 0.00 0.00 0.00 2.92
667 696 7.253817 GCTTTGACTGACGTATTTCTCTGTATC 60.254 40.741 0.00 0.00 0.00 2.24
668 697 6.531948 GCTTTGACTGACGTATTTCTCTGTAT 59.468 38.462 0.00 0.00 0.00 2.29
669 698 5.862323 GCTTTGACTGACGTATTTCTCTGTA 59.138 40.000 0.00 0.00 0.00 2.74
670 699 4.686554 GCTTTGACTGACGTATTTCTCTGT 59.313 41.667 0.00 0.00 0.00 3.41
671 700 4.686091 TGCTTTGACTGACGTATTTCTCTG 59.314 41.667 0.00 0.00 0.00 3.35
672 701 4.883083 TGCTTTGACTGACGTATTTCTCT 58.117 39.130 0.00 0.00 0.00 3.10
673 702 4.923871 TCTGCTTTGACTGACGTATTTCTC 59.076 41.667 0.00 0.00 0.00 2.87
674 703 4.883083 TCTGCTTTGACTGACGTATTTCT 58.117 39.130 0.00 0.00 0.00 2.52
675 704 5.591643 TTCTGCTTTGACTGACGTATTTC 57.408 39.130 0.00 0.00 0.00 2.17
676 705 4.083802 GCTTCTGCTTTGACTGACGTATTT 60.084 41.667 0.00 0.00 36.03 1.40
677 706 3.433615 GCTTCTGCTTTGACTGACGTATT 59.566 43.478 0.00 0.00 36.03 1.89
678 707 2.996621 GCTTCTGCTTTGACTGACGTAT 59.003 45.455 0.00 0.00 36.03 3.06
679 708 2.223947 TGCTTCTGCTTTGACTGACGTA 60.224 45.455 0.00 0.00 40.48 3.57
680 709 1.221414 GCTTCTGCTTTGACTGACGT 58.779 50.000 0.00 0.00 36.03 4.34
681 710 1.194098 CTGCTTCTGCTTTGACTGACG 59.806 52.381 0.00 0.00 40.48 4.35
682 711 1.069364 GCTGCTTCTGCTTTGACTGAC 60.069 52.381 0.00 0.00 40.48 3.51
683 712 1.233019 GCTGCTTCTGCTTTGACTGA 58.767 50.000 0.00 0.00 40.48 3.41
684 713 0.949397 TGCTGCTTCTGCTTTGACTG 59.051 50.000 0.00 0.00 40.48 3.51
685 714 1.236628 CTGCTGCTTCTGCTTTGACT 58.763 50.000 0.00 0.00 40.48 3.41
686 715 0.950116 ACTGCTGCTTCTGCTTTGAC 59.050 50.000 0.00 0.00 40.48 3.18
687 716 2.549064 TACTGCTGCTTCTGCTTTGA 57.451 45.000 0.00 0.00 40.48 2.69
688 717 3.303406 GTTTACTGCTGCTTCTGCTTTG 58.697 45.455 0.00 0.00 40.48 2.77
689 718 2.031682 CGTTTACTGCTGCTTCTGCTTT 60.032 45.455 0.00 0.00 40.48 3.51
690 719 1.532868 CGTTTACTGCTGCTTCTGCTT 59.467 47.619 0.00 0.00 40.48 3.91
691 720 1.151668 CGTTTACTGCTGCTTCTGCT 58.848 50.000 0.00 0.00 40.48 4.24
692 721 0.166814 CCGTTTACTGCTGCTTCTGC 59.833 55.000 0.00 0.00 40.20 4.26
693 722 0.798776 CCCGTTTACTGCTGCTTCTG 59.201 55.000 0.00 0.00 0.00 3.02
694 723 0.396811 ACCCGTTTACTGCTGCTTCT 59.603 50.000 0.00 0.00 0.00 2.85
695 724 0.517316 CACCCGTTTACTGCTGCTTC 59.483 55.000 0.00 0.00 0.00 3.86
696 725 0.107831 TCACCCGTTTACTGCTGCTT 59.892 50.000 0.00 0.00 0.00 3.91
697 726 0.602905 GTCACCCGTTTACTGCTGCT 60.603 55.000 0.00 0.00 0.00 4.24
698 727 1.574702 GGTCACCCGTTTACTGCTGC 61.575 60.000 0.00 0.00 0.00 5.25
699 728 2.540145 GGTCACCCGTTTACTGCTG 58.460 57.895 0.00 0.00 0.00 4.41
714 743 3.789459 GCTCTTCTAATCTGACGACGGTC 60.789 52.174 0.00 0.00 43.71 4.79
715 744 2.097791 GCTCTTCTAATCTGACGACGGT 59.902 50.000 0.00 0.00 0.00 4.83
716 745 2.356382 AGCTCTTCTAATCTGACGACGG 59.644 50.000 0.00 0.00 0.00 4.79
717 746 3.064134 TCAGCTCTTCTAATCTGACGACG 59.936 47.826 0.00 0.00 31.35 5.12
718 747 4.624336 TCAGCTCTTCTAATCTGACGAC 57.376 45.455 0.00 0.00 31.35 4.34
719 748 5.592282 AGATTCAGCTCTTCTAATCTGACGA 59.408 40.000 0.00 0.00 37.31 4.20
720 749 5.830912 AGATTCAGCTCTTCTAATCTGACG 58.169 41.667 0.00 0.00 37.31 4.35
724 753 4.408270 TGCCAGATTCAGCTCTTCTAATCT 59.592 41.667 0.00 0.00 38.82 2.40
725 754 4.701765 TGCCAGATTCAGCTCTTCTAATC 58.298 43.478 0.00 0.00 0.00 1.75
726 755 4.767578 TGCCAGATTCAGCTCTTCTAAT 57.232 40.909 0.00 0.00 0.00 1.73
727 756 4.256920 GTTGCCAGATTCAGCTCTTCTAA 58.743 43.478 0.00 0.00 0.00 2.10
728 757 3.261643 TGTTGCCAGATTCAGCTCTTCTA 59.738 43.478 0.00 0.00 0.00 2.10
729 758 2.039480 TGTTGCCAGATTCAGCTCTTCT 59.961 45.455 0.00 0.00 0.00 2.85
730 759 2.430465 TGTTGCCAGATTCAGCTCTTC 58.570 47.619 0.00 0.00 0.00 2.87
731 760 2.574006 TGTTGCCAGATTCAGCTCTT 57.426 45.000 0.00 0.00 0.00 2.85
732 761 2.574006 TTGTTGCCAGATTCAGCTCT 57.426 45.000 0.00 0.00 0.00 4.09
733 762 3.254166 TCTTTTGTTGCCAGATTCAGCTC 59.746 43.478 0.00 0.00 0.00 4.09
734 763 3.005155 GTCTTTTGTTGCCAGATTCAGCT 59.995 43.478 1.16 0.00 0.00 4.24
735 764 3.243501 TGTCTTTTGTTGCCAGATTCAGC 60.244 43.478 0.00 0.00 0.00 4.26
736 765 4.572985 TGTCTTTTGTTGCCAGATTCAG 57.427 40.909 0.00 0.00 0.00 3.02
737 766 4.998671 TTGTCTTTTGTTGCCAGATTCA 57.001 36.364 0.00 0.00 0.00 2.57
738 767 6.660887 TTTTTGTCTTTTGTTGCCAGATTC 57.339 33.333 0.00 0.00 0.00 2.52
739 768 6.038492 CCATTTTTGTCTTTTGTTGCCAGATT 59.962 34.615 0.00 0.00 0.00 2.40
740 769 5.528320 CCATTTTTGTCTTTTGTTGCCAGAT 59.472 36.000 0.00 0.00 0.00 2.90
741 770 4.874966 CCATTTTTGTCTTTTGTTGCCAGA 59.125 37.500 0.00 0.00 0.00 3.86
742 771 4.635324 ACCATTTTTGTCTTTTGTTGCCAG 59.365 37.500 0.00 0.00 0.00 4.85
745 774 5.727515 GCTCACCATTTTTGTCTTTTGTTGC 60.728 40.000 0.00 0.00 0.00 4.17
749 778 6.044682 AGAAGCTCACCATTTTTGTCTTTTG 58.955 36.000 0.00 0.00 0.00 2.44
750 779 6.225981 AGAAGCTCACCATTTTTGTCTTTT 57.774 33.333 0.00 0.00 0.00 2.27
751 780 5.859205 AGAAGCTCACCATTTTTGTCTTT 57.141 34.783 0.00 0.00 0.00 2.52
753 782 6.151817 GGATTAGAAGCTCACCATTTTTGTCT 59.848 38.462 0.00 0.00 0.00 3.41
756 785 6.405176 GGAGGATTAGAAGCTCACCATTTTTG 60.405 42.308 0.00 0.00 0.00 2.44
757 786 5.654209 GGAGGATTAGAAGCTCACCATTTTT 59.346 40.000 0.00 0.00 0.00 1.94
761 790 3.663198 AGGAGGATTAGAAGCTCACCAT 58.337 45.455 0.00 0.00 0.00 3.55
764 793 3.202097 GCAAGGAGGATTAGAAGCTCAC 58.798 50.000 0.00 0.00 0.00 3.51
1013 1077 0.482446 ATGGCTTGGACCAGGTTTGA 59.518 50.000 5.38 0.00 44.71 2.69
1228 1292 4.737177 AGCAGCCTTCAGCCCAGC 62.737 66.667 0.00 0.00 45.47 4.85
1269 1333 4.034394 GCAGCACAATCAGATTCAACGATA 59.966 41.667 0.00 0.00 0.00 2.92
1666 1906 5.973565 GCATGACATGAGTATTTTACAAGCC 59.026 40.000 19.76 0.00 0.00 4.35
1711 1951 6.471519 GCTTGTCTCTTAATTCATGCATTGTC 59.528 38.462 0.00 0.00 33.34 3.18
1725 1965 6.599244 CAGTTGGGATAAATGCTTGTCTCTTA 59.401 38.462 0.00 0.00 0.00 2.10
1750 1993 1.471287 TGCTGCTCATGTTCATGCTTC 59.529 47.619 7.80 1.32 0.00 3.86
1751 1994 1.201647 GTGCTGCTCATGTTCATGCTT 59.798 47.619 7.80 0.00 0.00 3.91
1768 2011 7.223777 GGAGATTGTAATGAGAGAAACTAGTGC 59.776 40.741 0.00 0.00 0.00 4.40
1772 2015 7.124901 AGCTGGAGATTGTAATGAGAGAAACTA 59.875 37.037 0.00 0.00 0.00 2.24
1798 2041 5.630415 TTAGGTAGCCGTAGAGTAACCTA 57.370 43.478 0.00 0.00 0.00 3.08
1820 2063 0.400213 TGGAAACCTTGCCGTCTGAT 59.600 50.000 0.00 0.00 0.00 2.90
1828 2071 1.152333 AAGGGGGTGGAAACCTTGC 60.152 57.895 0.00 0.00 42.71 4.01
1830 2073 1.002242 TGGAAGGGGGTGGAAACCTT 61.002 55.000 0.00 0.00 46.73 3.50
1831 2074 1.388217 TGGAAGGGGGTGGAAACCT 60.388 57.895 0.00 0.00 35.78 3.50
1832 2075 1.228769 GTGGAAGGGGGTGGAAACC 60.229 63.158 0.00 0.00 0.00 3.27
1833 2076 0.114364 ATGTGGAAGGGGGTGGAAAC 59.886 55.000 0.00 0.00 0.00 2.78
1834 2077 0.407918 GATGTGGAAGGGGGTGGAAA 59.592 55.000 0.00 0.00 0.00 3.13
1835 2078 0.477597 AGATGTGGAAGGGGGTGGAA 60.478 55.000 0.00 0.00 0.00 3.53
1836 2079 0.477597 AAGATGTGGAAGGGGGTGGA 60.478 55.000 0.00 0.00 0.00 4.02
1837 2080 0.409484 AAAGATGTGGAAGGGGGTGG 59.591 55.000 0.00 0.00 0.00 4.61
1838 2081 2.299867 CAAAAAGATGTGGAAGGGGGTG 59.700 50.000 0.00 0.00 0.00 4.61
1839 2082 2.608623 CAAAAAGATGTGGAAGGGGGT 58.391 47.619 0.00 0.00 0.00 4.95
1840 2083 1.276138 GCAAAAAGATGTGGAAGGGGG 59.724 52.381 0.00 0.00 0.00 5.40
1841 2084 1.276138 GGCAAAAAGATGTGGAAGGGG 59.724 52.381 0.00 0.00 0.00 4.79
1842 2085 1.276138 GGGCAAAAAGATGTGGAAGGG 59.724 52.381 0.00 0.00 0.00 3.95
1843 2086 2.028748 CAGGGCAAAAAGATGTGGAAGG 60.029 50.000 0.00 0.00 0.00 3.46
1844 2087 2.629617 ACAGGGCAAAAAGATGTGGAAG 59.370 45.455 0.00 0.00 0.00 3.46
1845 2088 2.364970 CACAGGGCAAAAAGATGTGGAA 59.635 45.455 0.00 0.00 38.04 3.53
1846 2089 1.962807 CACAGGGCAAAAAGATGTGGA 59.037 47.619 0.00 0.00 38.04 4.02
1886 2348 4.082190 CGTCCAACCTCTATGAGTTCAAGA 60.082 45.833 0.00 0.00 0.00 3.02
1892 2354 6.540438 TTATTTCGTCCAACCTCTATGAGT 57.460 37.500 0.00 0.00 0.00 3.41
1896 2358 5.191124 AGGGTTTATTTCGTCCAACCTCTAT 59.809 40.000 0.00 0.00 39.02 1.98
1922 2384 3.670627 GCAATCGACTGGGATTTTGACAC 60.671 47.826 0.00 0.00 34.50 3.67
1927 2389 1.818674 GGTGCAATCGACTGGGATTTT 59.181 47.619 0.00 0.00 34.50 1.82
1942 2404 4.469657 GGGATTGTATATTTCAGGGTGCA 58.530 43.478 0.00 0.00 0.00 4.57
1950 2430 9.280174 TCAATTTAGACCGGGATTGTATATTTC 57.720 33.333 6.32 0.00 32.70 2.17
1951 2431 9.635404 TTCAATTTAGACCGGGATTGTATATTT 57.365 29.630 6.32 0.00 32.70 1.40
1954 2434 6.993902 GGTTCAATTTAGACCGGGATTGTATA 59.006 38.462 6.32 0.00 32.70 1.47
1955 2435 5.826208 GGTTCAATTTAGACCGGGATTGTAT 59.174 40.000 6.32 0.00 32.70 2.29
1956 2436 5.187687 GGTTCAATTTAGACCGGGATTGTA 58.812 41.667 6.32 0.00 32.70 2.41
1957 2437 4.014406 GGTTCAATTTAGACCGGGATTGT 58.986 43.478 6.32 0.00 32.70 2.71
1958 2438 4.013728 TGGTTCAATTTAGACCGGGATTG 58.986 43.478 6.32 8.27 0.00 2.67
1960 2440 4.519906 ATGGTTCAATTTAGACCGGGAT 57.480 40.909 6.32 0.00 0.00 3.85
1961 2441 4.384427 GGTATGGTTCAATTTAGACCGGGA 60.384 45.833 6.32 0.00 0.00 5.14
1962 2442 3.881089 GGTATGGTTCAATTTAGACCGGG 59.119 47.826 6.32 0.00 0.00 5.73
1963 2443 4.777463 AGGTATGGTTCAATTTAGACCGG 58.223 43.478 0.00 0.00 0.00 5.28
1964 2444 6.482308 CCTTAGGTATGGTTCAATTTAGACCG 59.518 42.308 0.00 0.00 0.00 4.79
1965 2445 7.344134 ACCTTAGGTATGGTTCAATTTAGACC 58.656 38.462 0.15 0.00 32.11 3.85
1966 2446 7.224167 CGACCTTAGGTATGGTTCAATTTAGAC 59.776 40.741 2.88 0.00 35.25 2.59
1967 2447 7.093201 ACGACCTTAGGTATGGTTCAATTTAGA 60.093 37.037 2.88 0.00 35.25 2.10
1968 2448 7.046033 ACGACCTTAGGTATGGTTCAATTTAG 58.954 38.462 2.88 0.00 35.25 1.85
1969 2449 6.949715 ACGACCTTAGGTATGGTTCAATTTA 58.050 36.000 2.88 0.00 35.25 1.40
1970 2450 5.812286 ACGACCTTAGGTATGGTTCAATTT 58.188 37.500 2.88 0.00 35.25 1.82
1971 2451 5.431179 ACGACCTTAGGTATGGTTCAATT 57.569 39.130 2.88 0.00 35.25 2.32
1972 2452 5.431179 AACGACCTTAGGTATGGTTCAAT 57.569 39.130 2.88 0.00 35.25 2.57
1973 2453 4.895668 AACGACCTTAGGTATGGTTCAA 57.104 40.909 2.88 0.00 35.25 2.69
1974 2454 4.895668 AAACGACCTTAGGTATGGTTCA 57.104 40.909 2.88 0.00 35.25 3.18
1975 2455 4.633126 GGAAAACGACCTTAGGTATGGTTC 59.367 45.833 2.88 6.38 35.25 3.62
1976 2456 4.041938 TGGAAAACGACCTTAGGTATGGTT 59.958 41.667 2.88 6.52 35.25 3.67
1977 2457 3.583966 TGGAAAACGACCTTAGGTATGGT 59.416 43.478 2.88 0.00 35.25 3.55
1978 2458 4.210724 TGGAAAACGACCTTAGGTATGG 57.789 45.455 2.88 0.00 35.25 2.74
1979 2459 5.470777 TGTTTGGAAAACGACCTTAGGTATG 59.529 40.000 2.88 2.39 35.25 2.39
1980 2460 5.623169 TGTTTGGAAAACGACCTTAGGTAT 58.377 37.500 2.88 0.00 35.25 2.73
1981 2461 5.033589 TGTTTGGAAAACGACCTTAGGTA 57.966 39.130 2.88 0.00 35.25 3.08
2014 2829 0.893727 AACGTTGAACTGGGCATCCC 60.894 55.000 0.00 0.00 45.71 3.85
2020 2835 2.680841 TCAAAGTGAACGTTGAACTGGG 59.319 45.455 5.00 5.65 40.40 4.45
2025 2840 3.340034 AGTGGTCAAAGTGAACGTTGAA 58.660 40.909 5.00 0.00 43.71 2.69
2026 2841 2.933906 GAGTGGTCAAAGTGAACGTTGA 59.066 45.455 5.00 7.58 36.73 3.18
2027 2842 2.031683 GGAGTGGTCAAAGTGAACGTTG 59.968 50.000 5.00 3.11 36.73 4.10
2034 2856 1.284982 CTCGCGGAGTGGTCAAAGTG 61.285 60.000 6.13 0.00 39.32 3.16
2100 3131 3.243134 CCCGTCCTTAGTTCGAATCTCTC 60.243 52.174 0.00 0.00 0.00 3.20
2114 3145 1.675552 CTGTTGACAAACCCGTCCTT 58.324 50.000 0.00 0.00 35.25 3.36
2115 3146 0.818040 GCTGTTGACAAACCCGTCCT 60.818 55.000 0.00 0.00 35.25 3.85
2116 3147 0.818040 AGCTGTTGACAAACCCGTCC 60.818 55.000 0.00 0.00 35.25 4.79
2164 3195 6.183360 GGTTGTCCTTTTTGTTCACAATTGAC 60.183 38.462 13.59 0.11 35.55 3.18
2166 3197 5.220378 CGGTTGTCCTTTTTGTTCACAATTG 60.220 40.000 3.24 3.24 35.55 2.32
2177 3208 7.231925 AGGTTAAATATGTCGGTTGTCCTTTTT 59.768 33.333 0.00 0.00 0.00 1.94
2189 3220 7.762615 TGAACTAACAGGAGGTTAAATATGTCG 59.237 37.037 0.00 0.00 41.27 4.35
2488 3524 9.429359 TCTTTTATTTCTGCTTTTTGTTTGTGA 57.571 25.926 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.