Multiple sequence alignment - TraesCS6D01G224900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G224900 chr6D 100.000 4770 0 0 1 4770 316623508 316628277 0.000000e+00 8809.0
1 TraesCS6D01G224900 chr6D 95.960 99 3 1 4162 4259 316627579 316627677 4.940000e-35 159.0
2 TraesCS6D01G224900 chr6D 95.960 99 3 1 4072 4170 316627669 316627766 4.940000e-35 159.0
3 TraesCS6D01G224900 chr6D 84.354 147 21 1 4182 4326 338408404 338408550 4.980000e-30 143.0
4 TraesCS6D01G224900 chr6D 77.844 167 28 7 4167 4325 406113163 406113328 1.410000e-15 95.3
5 TraesCS6D01G224900 chr6B 97.110 1730 39 7 2445 4169 507671344 507669621 0.000000e+00 2907.0
6 TraesCS6D01G224900 chr6B 95.885 1604 43 13 784 2369 507672935 507671337 0.000000e+00 2575.0
7 TraesCS6D01G224900 chr6B 92.564 511 29 5 1 510 507678878 507678376 0.000000e+00 725.0
8 TraesCS6D01G224900 chr6B 83.127 403 54 12 4375 4770 372316389 372315994 5.870000e-94 355.0
9 TraesCS6D01G224900 chr6B 87.647 170 17 2 4171 4336 507669710 507669541 1.350000e-45 195.0
10 TraesCS6D01G224900 chr6B 85.556 180 17 6 334 510 646203694 646203867 3.790000e-41 180.0
11 TraesCS6D01G224900 chr6B 97.297 37 0 1 615 651 507677023 507676988 1.430000e-05 62.1
12 TraesCS6D01G224900 chr6A 91.405 2071 91 39 332 2369 454635417 454637433 0.000000e+00 2758.0
13 TraesCS6D01G224900 chr6A 88.140 1602 105 44 2516 4090 454637474 454639017 0.000000e+00 1827.0
14 TraesCS6D01G224900 chr6A 93.215 339 16 4 1 339 454633336 454633667 4.290000e-135 492.0
15 TraesCS6D01G224900 chr6A 94.175 103 4 2 2345 2446 553003177 553003278 6.390000e-34 156.0
16 TraesCS6D01G224900 chr6A 90.141 71 5 1 4093 4161 62963035 62963105 1.830000e-14 91.6
17 TraesCS6D01G224900 chr6A 97.143 35 1 0 4174 4208 562921972 562922006 5.160000e-05 60.2
18 TraesCS6D01G224900 chr7B 88.498 426 48 1 4345 4770 442374189 442374613 9.150000e-142 514.0
19 TraesCS6D01G224900 chr7B 88.235 68 7 1 4172 4238 633011420 633011353 3.960000e-11 80.5
20 TraesCS6D01G224900 chr5D 84.762 420 50 11 4346 4756 498647375 498647789 4.440000e-110 409.0
21 TraesCS6D01G224900 chr5D 83.841 427 62 7 4345 4770 360909669 360910089 2.670000e-107 399.0
22 TraesCS6D01G224900 chr5D 83.673 147 22 1 4182 4326 484304994 484305140 2.320000e-28 137.0
23 TraesCS6D01G224900 chr5D 80.503 159 27 2 4173 4327 459991362 459991520 8.390000e-23 119.0
24 TraesCS6D01G224900 chr7D 85.714 385 47 6 4387 4770 21031253 21031630 2.670000e-107 399.0
25 TraesCS6D01G224900 chr1B 84.262 413 55 10 4348 4756 361444036 361443630 1.240000e-105 394.0
26 TraesCS6D01G224900 chr1D 83.491 424 58 9 4347 4764 483355626 483355209 7.490000e-103 385.0
27 TraesCS6D01G224900 chr1D 98.889 90 1 0 2360 2449 12546921 12547010 1.370000e-35 161.0
28 TraesCS6D01G224900 chr1D 95.876 97 4 0 2352 2448 463456877 463456973 1.780000e-34 158.0
29 TraesCS6D01G224900 chr1D 95.876 97 3 1 2350 2446 296532104 296532009 6.390000e-34 156.0
30 TraesCS6D01G224900 chr1D 83.784 148 21 2 4182 4326 356362218 356362365 2.320000e-28 137.0
31 TraesCS6D01G224900 chr1D 90.541 74 5 1 4090 4161 332997172 332997245 3.930000e-16 97.1
32 TraesCS6D01G224900 chr2A 82.517 429 52 14 4345 4755 17755008 17755431 5.870000e-94 355.0
33 TraesCS6D01G224900 chr2A 88.889 117 12 1 334 450 120031490 120031375 4.980000e-30 143.0
34 TraesCS6D01G224900 chr2A 92.958 71 3 1 4093 4161 746803318 746803248 8.450000e-18 102.0
35 TraesCS6D01G224900 chr5A 83.243 370 56 6 4356 4723 461638001 461638366 7.650000e-88 335.0
36 TraesCS6D01G224900 chr5A 97.895 95 2 0 2354 2448 641680861 641680767 1.060000e-36 165.0
37 TraesCS6D01G224900 chr5A 96.875 96 2 1 2354 2448 680978069 680978164 4.940000e-35 159.0
38 TraesCS6D01G224900 chr5A 95.000 100 5 0 2354 2453 48655382 48655283 1.780000e-34 158.0
39 TraesCS6D01G224900 chr5A 80.892 157 25 4 4174 4326 680971261 680971106 8.390000e-23 119.0
40 TraesCS6D01G224900 chr5A 88.889 81 5 3 4085 4161 680971261 680971181 3.930000e-16 97.1
41 TraesCS6D01G224900 chr2B 85.870 184 22 2 336 516 169855875 169855693 4.870000e-45 193.0
42 TraesCS6D01G224900 chr4B 97.849 93 1 1 2362 2454 644289390 644289481 4.940000e-35 159.0
43 TraesCS6D01G224900 chr4B 84.106 151 21 2 4179 4326 613157258 613157408 4.980000e-30 143.0
44 TraesCS6D01G224900 chr4B 89.024 82 7 1 4090 4169 613157258 613157339 3.040000e-17 100.0
45 TraesCS6D01G224900 chr1A 97.826 92 2 0 2358 2449 107663283 107663192 4.940000e-35 159.0
46 TraesCS6D01G224900 chr4D 85.714 147 19 1 4182 4326 36603047 36603193 2.300000e-33 154.0
47 TraesCS6D01G224900 chr4D 84.211 152 22 1 4177 4326 3590640 3590489 3.850000e-31 147.0
48 TraesCS6D01G224900 chr4D 83.673 147 22 1 4182 4326 465125310 465125456 2.320000e-28 137.0
49 TraesCS6D01G224900 chr4D 90.789 76 5 1 4088 4161 3590640 3590565 3.040000e-17 100.0
50 TraesCS6D01G224900 chr2D 85.915 142 17 2 4188 4326 423556916 423556775 1.070000e-31 148.0
51 TraesCS6D01G224900 chr2D 90.411 73 5 2 4099 4169 423556916 423556844 1.410000e-15 95.3
52 TraesCS6D01G224900 chr5B 86.111 72 6 3 4172 4241 546488282 546488351 1.840000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G224900 chr6D 316623508 316628277 4769 False 3042.333333 8809 97.306667 1 4770 3 chr6D.!!$F3 4769
1 TraesCS6D01G224900 chr6B 507669541 507672935 3394 True 1892.333333 2907 93.547333 784 4336 3 chr6B.!!$R2 3552
2 TraesCS6D01G224900 chr6B 507676988 507678878 1890 True 393.550000 725 94.930500 1 651 2 chr6B.!!$R3 650
3 TraesCS6D01G224900 chr6A 454633336 454639017 5681 False 1692.333333 2758 90.920000 1 4090 3 chr6A.!!$F4 4089

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
339 2098 0.111253 CTTTGTGTCAGGGCCCTCTT 59.889 55.000 25.77 0.0 0.00 2.85 F
487 2246 0.674581 TGCATTCGCTGACAAGAGGG 60.675 55.000 0.00 0.0 39.64 4.30 F
1203 3003 0.322906 CCTTGGGGCTTCTGGAGTTC 60.323 60.000 0.00 0.0 0.00 3.01 F
2086 3938 0.325765 GCCTGGGTTCTACCTCCTCT 60.326 60.000 0.00 0.0 38.64 3.69 F
3458 5338 1.266718 TGATTGTGGCGCAGTTCTTTC 59.733 47.619 10.83 0.0 0.00 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1203 3003 0.532862 AACCACAGCCTGAGAACACG 60.533 55.0 0.00 0.00 0.00 4.49 R
2456 4308 0.389817 CGATGAGGCTTCAACGGACA 60.390 55.0 18.81 0.00 43.40 4.02 R
2514 4366 4.021544 TGCCTGTTCACACAAGAAAAACTT 60.022 37.5 0.00 0.00 39.70 2.66 R
3479 5359 0.171007 ATGCATTTCCAAGGAACGCG 59.829 50.0 3.53 3.53 36.27 6.01 R
4549 7666 0.030101 GAGGCGATGAGGAAGACGAG 59.970 60.0 0.00 0.00 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
213 215 6.998074 CAGTATATGGAGCCCAAAATTCAGTA 59.002 38.462 0.00 0.00 36.95 2.74
264 266 3.884693 TCGATCATTTTGTATGCCATGCT 59.115 39.130 0.00 0.00 0.00 3.79
266 268 5.179929 TCGATCATTTTGTATGCCATGCTAG 59.820 40.000 0.00 0.00 0.00 3.42
267 269 4.572985 TCATTTTGTATGCCATGCTAGC 57.427 40.909 8.10 8.10 0.00 3.42
268 270 3.952967 TCATTTTGTATGCCATGCTAGCA 59.047 39.130 21.85 21.85 45.94 3.49
317 319 0.320374 TGTAGGTGTTCTGAAGCCGG 59.680 55.000 0.00 0.00 0.00 6.13
327 329 1.134220 TCTGAAGCCGGTTCTTTGTGT 60.134 47.619 11.43 0.00 35.99 3.72
339 2098 0.111253 CTTTGTGTCAGGGCCCTCTT 59.889 55.000 25.77 0.00 0.00 2.85
354 2113 1.410224 CCTCTTGGGGTAAGAATGGCC 60.410 57.143 0.00 0.00 44.47 5.36
371 2130 1.299648 CCAAGAAGGCCATCGACCA 59.700 57.895 5.01 0.00 0.00 4.02
408 2167 2.034687 ATGCGCTCCAAGTTGGCT 59.965 55.556 17.68 0.00 37.47 4.75
414 2173 0.884704 GCTCCAAGTTGGCTGTCGAA 60.885 55.000 17.68 0.00 37.47 3.71
480 2239 2.758089 CCTGGCTGCATTCGCTGAC 61.758 63.158 0.50 0.00 45.04 3.51
487 2246 0.674581 TGCATTCGCTGACAAGAGGG 60.675 55.000 0.00 0.00 39.64 4.30
501 2260 3.001406 AGGGAGCCCGTGTACACC 61.001 66.667 20.11 6.53 41.95 4.16
512 2271 3.498927 CGTGTACACCGGAGAGTAATT 57.501 47.619 20.11 0.00 0.00 1.40
515 2274 4.095483 CGTGTACACCGGAGAGTAATTAGT 59.905 45.833 20.11 0.00 0.00 2.24
522 2281 2.100252 CGGAGAGTAATTAGTGCCCGAA 59.900 50.000 18.28 0.00 38.10 4.30
537 2296 1.616865 CCCGAAGTGTACACAGGAGAA 59.383 52.381 27.06 0.00 0.00 2.87
538 2297 2.036733 CCCGAAGTGTACACAGGAGAAA 59.963 50.000 27.06 0.00 0.00 2.52
559 2318 0.874390 GTGTTGATGTGCCGTGACAT 59.126 50.000 0.00 0.00 39.34 3.06
588 2353 2.997897 GGACTCCTGCCACTCCGT 60.998 66.667 0.00 0.00 0.00 4.69
656 2432 3.399330 TGGTTGTTCCGTTCTTCATCTC 58.601 45.455 0.00 0.00 39.52 2.75
755 2532 2.816520 GTACGCGCATTTCCCGGT 60.817 61.111 5.73 0.00 0.00 5.28
1006 2788 1.655654 CGACTCTCCACTATGCGCG 60.656 63.158 0.00 0.00 0.00 6.86
1182 2976 3.044059 GCTGACCACCGCATCTTGC 62.044 63.158 0.00 0.00 40.69 4.01
1200 3000 1.606531 CTCCTTGGGGCTTCTGGAG 59.393 63.158 0.00 0.00 38.38 3.86
1203 3003 0.322906 CCTTGGGGCTTCTGGAGTTC 60.323 60.000 0.00 0.00 0.00 3.01
1213 3013 3.312828 CTTCTGGAGTTCGTGTTCTCAG 58.687 50.000 0.00 0.00 32.93 3.35
1376 3183 3.553095 GAGCTCCGTGCCCAAGGTT 62.553 63.158 0.87 0.00 44.23 3.50
1600 3452 4.941263 TGGCAAGCTTGGTTAGTAACATAG 59.059 41.667 27.10 11.24 0.00 2.23
2086 3938 0.325765 GCCTGGGTTCTACCTCCTCT 60.326 60.000 0.00 0.00 38.64 3.69
2243 4095 4.457466 TCCTTTGAGGTTTGTAACAGGAC 58.543 43.478 0.00 0.00 36.53 3.85
2326 4178 6.935167 TGATTAGAGAAAGCACTGTGTATCA 58.065 36.000 9.86 3.13 0.00 2.15
2328 4180 4.607293 AGAGAAAGCACTGTGTATCACA 57.393 40.909 9.86 2.66 42.45 3.58
2365 4217 4.446051 GCATGCTCGTCTTCCTTATTACTC 59.554 45.833 11.37 0.00 0.00 2.59
2369 4221 4.261698 GCTCGTCTTCCTTATTACTCCCTC 60.262 50.000 0.00 0.00 0.00 4.30
2370 4222 4.213513 TCGTCTTCCTTATTACTCCCTCC 58.786 47.826 0.00 0.00 0.00 4.30
2371 4223 3.004524 CGTCTTCCTTATTACTCCCTCCG 59.995 52.174 0.00 0.00 0.00 4.63
2372 4224 3.959449 GTCTTCCTTATTACTCCCTCCGT 59.041 47.826 0.00 0.00 0.00 4.69
2373 4225 5.136105 GTCTTCCTTATTACTCCCTCCGTA 58.864 45.833 0.00 0.00 0.00 4.02
2374 4226 5.595952 GTCTTCCTTATTACTCCCTCCGTAA 59.404 44.000 0.00 0.00 0.00 3.18
2375 4227 6.097412 GTCTTCCTTATTACTCCCTCCGTAAA 59.903 42.308 0.00 0.00 31.36 2.01
2376 4228 5.859205 TCCTTATTACTCCCTCCGTAAAC 57.141 43.478 0.00 0.00 31.36 2.01
2377 4229 5.522641 TCCTTATTACTCCCTCCGTAAACT 58.477 41.667 0.00 0.00 31.36 2.66
2378 4230 6.672593 TCCTTATTACTCCCTCCGTAAACTA 58.327 40.000 0.00 0.00 31.36 2.24
2379 4231 7.125391 TCCTTATTACTCCCTCCGTAAACTAA 58.875 38.462 0.00 0.00 31.36 2.24
2380 4232 7.786464 TCCTTATTACTCCCTCCGTAAACTAAT 59.214 37.037 0.00 0.00 31.36 1.73
2381 4233 9.082313 CCTTATTACTCCCTCCGTAAACTAATA 57.918 37.037 0.00 0.00 31.36 0.98
2386 4238 9.866655 TTACTCCCTCCGTAAACTAATATAAGA 57.133 33.333 0.00 0.00 0.00 2.10
2387 4239 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2388 4240 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
2389 4241 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
2390 4242 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
2391 4243 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
2392 4244 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
2442 4294 8.777578 TGCTCTTATATTAGTTTACAGAGGGA 57.222 34.615 0.00 0.00 0.00 4.20
2443 4295 8.861086 TGCTCTTATATTAGTTTACAGAGGGAG 58.139 37.037 0.00 0.00 0.00 4.30
2444 4296 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
2450 4302 7.894753 ATTAGTTTACAGAGGGAGTACTACC 57.105 40.000 17.30 17.30 0.00 3.18
2452 4304 6.649041 AGTTTACAGAGGGAGTACTACCTA 57.351 41.667 27.44 8.58 46.12 3.08
2453 4305 7.037342 AGTTTACAGAGGGAGTACTACCTAA 57.963 40.000 27.44 14.60 46.12 2.69
2454 4306 7.650660 AGTTTACAGAGGGAGTACTACCTAAT 58.349 38.462 27.44 15.74 46.12 1.73
2455 4307 8.121185 AGTTTACAGAGGGAGTACTACCTAATT 58.879 37.037 27.44 15.35 46.12 1.40
2456 4308 8.756927 GTTTACAGAGGGAGTACTACCTAATTT 58.243 37.037 27.44 13.81 46.12 1.82
2459 4311 6.380560 ACAGAGGGAGTACTACCTAATTTGTC 59.619 42.308 27.44 12.66 46.12 3.18
2493 4345 9.419297 GCCTCATCGTACATGTTATTTTATCTA 57.581 33.333 2.30 0.00 0.00 1.98
2687 4561 2.757894 TAGAAACCAGTTTTGCCCCA 57.242 45.000 0.00 0.00 32.11 4.96
2890 4764 8.856153 TTACAAATTGACCTAGCAGTTATTCA 57.144 30.769 0.00 0.00 0.00 2.57
3238 5113 5.056480 GGCCAAACTTGTTATGCTTTCTTT 58.944 37.500 0.00 0.00 0.00 2.52
3239 5114 5.177511 GGCCAAACTTGTTATGCTTTCTTTC 59.822 40.000 0.00 0.00 0.00 2.62
3272 5147 4.907809 ACTTCTTGTTACTTAAGGAGGCC 58.092 43.478 7.53 0.00 35.48 5.19
3294 5171 9.582648 AGGCCTTTAACACTTTTTAGAAGAATA 57.417 29.630 0.00 0.00 0.00 1.75
3400 5277 4.381411 CCCGGGAGATAAATCAGAAAGTC 58.619 47.826 18.48 0.00 0.00 3.01
3458 5338 1.266718 TGATTGTGGCGCAGTTCTTTC 59.733 47.619 10.83 0.00 0.00 2.62
3471 5351 5.504392 GCAGTTCTTTCTTTGCAAATTTGG 58.496 37.500 19.47 0.66 36.59 3.28
3479 5359 3.007831 TCTTTGCAAATTTGGGACCATCC 59.992 43.478 19.47 1.17 35.23 3.51
3498 5378 0.171007 CGCGTTCCTTGGAAATGCAT 59.829 50.000 20.39 0.00 38.31 3.96
3897 6445 5.125097 GGGATGCTAGATTATTTGCAGATGG 59.875 44.000 0.00 0.00 38.87 3.51
3982 6537 5.023533 TGTAAGGTAGGAAAGCTAGCATG 57.976 43.478 18.83 0.00 33.87 4.06
4150 6705 7.861372 AGAGATTTCAATACGAACTACATACGG 59.139 37.037 0.00 0.00 31.73 4.02
4161 6716 8.430801 ACGAACTACATACGGATATATAGACC 57.569 38.462 0.00 0.00 0.00 3.85
4162 6717 8.263640 ACGAACTACATACGGATATATAGACCT 58.736 37.037 0.00 0.00 0.00 3.85
4163 6718 8.549548 CGAACTACATACGGATATATAGACCTG 58.450 40.741 7.03 2.79 0.00 4.00
4164 6719 7.804843 ACTACATACGGATATATAGACCTGC 57.195 40.000 7.03 0.00 0.00 4.85
4165 6720 7.575505 ACTACATACGGATATATAGACCTGCT 58.424 38.462 7.03 0.00 0.00 4.24
4166 6721 8.053963 ACTACATACGGATATATAGACCTGCTT 58.946 37.037 7.03 0.00 0.00 3.91
4167 6722 7.719871 ACATACGGATATATAGACCTGCTTT 57.280 36.000 7.03 0.00 0.00 3.51
4168 6723 8.818622 ACATACGGATATATAGACCTGCTTTA 57.181 34.615 7.03 0.00 0.00 1.85
4169 6724 9.251440 ACATACGGATATATAGACCTGCTTTAA 57.749 33.333 7.03 0.00 0.00 1.52
4170 6725 9.517609 CATACGGATATATAGACCTGCTTTAAC 57.482 37.037 7.03 0.00 0.00 2.01
4171 6726 7.778185 ACGGATATATAGACCTGCTTTAACT 57.222 36.000 7.03 0.00 0.00 2.24
4172 6727 8.191534 ACGGATATATAGACCTGCTTTAACTT 57.808 34.615 7.03 0.00 0.00 2.66
4173 6728 8.648693 ACGGATATATAGACCTGCTTTAACTTT 58.351 33.333 7.03 0.00 0.00 2.66
4174 6729 9.490379 CGGATATATAGACCTGCTTTAACTTTT 57.510 33.333 7.03 0.00 0.00 2.27
4181 6736 7.646548 AGACCTGCTTTAACTTTTCTTTTCT 57.353 32.000 0.00 0.00 0.00 2.52
4182 6737 8.747538 AGACCTGCTTTAACTTTTCTTTTCTA 57.252 30.769 0.00 0.00 0.00 2.10
4183 6738 8.622157 AGACCTGCTTTAACTTTTCTTTTCTAC 58.378 33.333 0.00 0.00 0.00 2.59
4184 6739 8.521170 ACCTGCTTTAACTTTTCTTTTCTACT 57.479 30.769 0.00 0.00 0.00 2.57
4185 6740 8.622157 ACCTGCTTTAACTTTTCTTTTCTACTC 58.378 33.333 0.00 0.00 0.00 2.59
4186 6741 8.841300 CCTGCTTTAACTTTTCTTTTCTACTCT 58.159 33.333 0.00 0.00 0.00 3.24
4187 6742 9.871299 CTGCTTTAACTTTTCTTTTCTACTCTC 57.129 33.333 0.00 0.00 0.00 3.20
4188 6743 9.614792 TGCTTTAACTTTTCTTTTCTACTCTCT 57.385 29.630 0.00 0.00 0.00 3.10
4191 6746 8.813643 TTAACTTTTCTTTTCTACTCTCTCCG 57.186 34.615 0.00 0.00 0.00 4.63
4192 6747 6.408107 ACTTTTCTTTTCTACTCTCTCCGT 57.592 37.500 0.00 0.00 0.00 4.69
4193 6748 6.818233 ACTTTTCTTTTCTACTCTCTCCGTT 58.182 36.000 0.00 0.00 0.00 4.44
4194 6749 6.924612 ACTTTTCTTTTCTACTCTCTCCGTTC 59.075 38.462 0.00 0.00 0.00 3.95
4195 6750 5.388408 TTCTTTTCTACTCTCTCCGTTCC 57.612 43.478 0.00 0.00 0.00 3.62
4196 6751 4.664392 TCTTTTCTACTCTCTCCGTTCCT 58.336 43.478 0.00 0.00 0.00 3.36
4197 6752 5.813383 TCTTTTCTACTCTCTCCGTTCCTA 58.187 41.667 0.00 0.00 0.00 2.94
4198 6753 6.243900 TCTTTTCTACTCTCTCCGTTCCTAA 58.756 40.000 0.00 0.00 0.00 2.69
4199 6754 6.718454 TCTTTTCTACTCTCTCCGTTCCTAAA 59.282 38.462 0.00 0.00 0.00 1.85
4200 6755 7.396623 TCTTTTCTACTCTCTCCGTTCCTAAAT 59.603 37.037 0.00 0.00 0.00 1.40
4201 6756 8.585471 TTTTCTACTCTCTCCGTTCCTAAATA 57.415 34.615 0.00 0.00 0.00 1.40
4202 6757 8.763984 TTTCTACTCTCTCCGTTCCTAAATAT 57.236 34.615 0.00 0.00 0.00 1.28
4203 6758 9.857656 TTTCTACTCTCTCCGTTCCTAAATATA 57.142 33.333 0.00 0.00 0.00 0.86
4204 6759 9.857656 TTCTACTCTCTCCGTTCCTAAATATAA 57.142 33.333 0.00 0.00 0.00 0.98
4205 6760 9.504708 TCTACTCTCTCCGTTCCTAAATATAAG 57.495 37.037 0.00 0.00 0.00 1.73
4206 6761 9.287373 CTACTCTCTCCGTTCCTAAATATAAGT 57.713 37.037 0.00 0.00 0.00 2.24
4207 6762 8.536340 ACTCTCTCCGTTCCTAAATATAAGTT 57.464 34.615 0.00 0.00 0.00 2.66
4208 6763 8.979534 ACTCTCTCCGTTCCTAAATATAAGTTT 58.020 33.333 0.00 0.00 0.00 2.66
4209 6764 9.819267 CTCTCTCCGTTCCTAAATATAAGTTTT 57.181 33.333 0.00 0.00 0.00 2.43
4238 6793 8.783999 AGAGATTTCAATACGAACTACATACG 57.216 34.615 0.00 0.00 31.73 3.06
4239 6794 7.861372 AGAGATTTCAATACGAACTACATACGG 59.139 37.037 0.00 0.00 31.73 4.02
4240 6795 7.709947 AGATTTCAATACGAACTACATACGGA 58.290 34.615 0.00 0.00 31.73 4.69
4241 6796 8.358148 AGATTTCAATACGAACTACATACGGAT 58.642 33.333 0.00 0.00 31.73 4.18
4242 6797 9.616634 GATTTCAATACGAACTACATACGGATA 57.383 33.333 0.00 0.00 31.73 2.59
4252 6807 8.549548 CGAACTACATACGGATATATAGACCTG 58.450 40.741 7.03 2.79 0.00 4.00
4255 6810 6.701145 ACATACGGATATATAGACCTGCTG 57.299 41.667 7.03 0.00 0.00 4.41
4258 6813 7.832685 ACATACGGATATATAGACCTGCTGTAA 59.167 37.037 7.03 0.00 0.00 2.41
4261 6816 6.153000 ACGGATATATAGACCTGCTGTAAAGG 59.847 42.308 7.03 0.00 40.93 3.11
4264 6819 7.618512 GGATATATAGACCTGCTGTAAAGGGTA 59.381 40.741 0.00 0.00 39.30 3.69
4265 6820 6.667558 ATATAGACCTGCTGTAAAGGGTAC 57.332 41.667 0.00 0.00 39.30 3.34
4272 6827 4.565652 CCTGCTGTAAAGGGTACATTCACT 60.566 45.833 0.00 0.00 0.00 3.41
4284 6839 6.594159 AGGGTACATTCACTCATTTTACTTCG 59.406 38.462 0.00 0.00 0.00 3.79
4287 6842 8.378421 GGTACATTCACTCATTTTACTTCGTAC 58.622 37.037 0.00 0.00 0.00 3.67
4348 6903 4.537433 AGCATCTTCGCTCGCCCC 62.537 66.667 0.00 0.00 37.91 5.80
4381 7498 5.686159 TTTTTACCGTCGGCATCTAAAAA 57.314 34.783 18.85 18.85 0.00 1.94
4383 7500 5.473796 TTTACCGTCGGCATCTAAAAATC 57.526 39.130 12.28 0.00 0.00 2.17
4384 7501 1.931172 ACCGTCGGCATCTAAAAATCG 59.069 47.619 12.28 0.00 0.00 3.34
4385 7502 1.260561 CCGTCGGCATCTAAAAATCGG 59.739 52.381 0.00 0.00 0.00 4.18
4387 7504 1.002792 GTCGGCATCTAAAAATCGGCC 60.003 52.381 0.00 0.00 38.04 6.13
4388 7505 0.310854 CGGCATCTAAAAATCGGCCC 59.689 55.000 0.00 0.00 38.16 5.80
4389 7506 1.398692 GGCATCTAAAAATCGGCCCA 58.601 50.000 0.00 0.00 35.42 5.36
4390 7507 1.338020 GGCATCTAAAAATCGGCCCAG 59.662 52.381 0.00 0.00 35.42 4.45
4392 7509 2.033424 GCATCTAAAAATCGGCCCAGTC 59.967 50.000 0.00 0.00 0.00 3.51
4393 7510 2.018542 TCTAAAAATCGGCCCAGTCG 57.981 50.000 0.00 0.00 0.00 4.18
4394 7511 1.276989 TCTAAAAATCGGCCCAGTCGT 59.723 47.619 0.00 0.00 30.45 4.34
4395 7512 1.396996 CTAAAAATCGGCCCAGTCGTG 59.603 52.381 0.00 0.00 30.45 4.35
4396 7513 1.862602 AAAAATCGGCCCAGTCGTGC 61.863 55.000 0.00 0.00 30.45 5.34
4397 7514 2.748058 AAAATCGGCCCAGTCGTGCT 62.748 55.000 0.00 0.00 30.45 4.40
4398 7515 2.748058 AAATCGGCCCAGTCGTGCTT 62.748 55.000 0.00 0.00 30.45 3.91
4399 7516 3.665675 ATCGGCCCAGTCGTGCTTC 62.666 63.158 0.00 0.00 30.45 3.86
4401 7518 4.329545 GGCCCAGTCGTGCTTCCA 62.330 66.667 0.00 0.00 0.00 3.53
4402 7519 2.743928 GCCCAGTCGTGCTTCCAG 60.744 66.667 0.00 0.00 0.00 3.86
4403 7520 3.059982 CCCAGTCGTGCTTCCAGA 58.940 61.111 0.00 0.00 0.00 3.86
4404 7521 1.371183 CCCAGTCGTGCTTCCAGAA 59.629 57.895 0.00 0.00 0.00 3.02
4405 7522 0.250295 CCCAGTCGTGCTTCCAGAAA 60.250 55.000 0.00 0.00 0.00 2.52
4406 7523 0.868406 CCAGTCGTGCTTCCAGAAAC 59.132 55.000 0.00 0.00 0.00 2.78
4407 7524 0.868406 CAGTCGTGCTTCCAGAAACC 59.132 55.000 0.00 0.00 0.00 3.27
4408 7525 0.250338 AGTCGTGCTTCCAGAAACCC 60.250 55.000 0.00 0.00 0.00 4.11
4409 7526 0.534203 GTCGTGCTTCCAGAAACCCA 60.534 55.000 0.00 0.00 0.00 4.51
4410 7527 0.181587 TCGTGCTTCCAGAAACCCAA 59.818 50.000 0.00 0.00 0.00 4.12
4411 7528 1.028905 CGTGCTTCCAGAAACCCAAA 58.971 50.000 0.00 0.00 0.00 3.28
4412 7529 1.613437 CGTGCTTCCAGAAACCCAAAT 59.387 47.619 0.00 0.00 0.00 2.32
4413 7530 2.035832 CGTGCTTCCAGAAACCCAAATT 59.964 45.455 0.00 0.00 0.00 1.82
4414 7531 3.492482 CGTGCTTCCAGAAACCCAAATTT 60.492 43.478 0.00 0.00 0.00 1.82
4415 7532 4.058124 GTGCTTCCAGAAACCCAAATTTC 58.942 43.478 0.00 0.00 38.62 2.17
4416 7533 3.243704 TGCTTCCAGAAACCCAAATTTCG 60.244 43.478 0.00 0.00 42.37 3.46
4417 7534 3.317150 CTTCCAGAAACCCAAATTTCGC 58.683 45.455 0.00 0.00 42.37 4.70
4418 7535 2.593026 TCCAGAAACCCAAATTTCGCT 58.407 42.857 0.00 0.00 42.37 4.93
4419 7536 2.295909 TCCAGAAACCCAAATTTCGCTG 59.704 45.455 0.00 0.00 42.37 5.18
4420 7537 2.610232 CCAGAAACCCAAATTTCGCTGG 60.610 50.000 0.00 0.00 42.37 4.85
4421 7538 2.035832 CAGAAACCCAAATTTCGCTGGT 59.964 45.455 0.00 0.00 42.37 4.00
4422 7539 2.698274 AGAAACCCAAATTTCGCTGGTT 59.302 40.909 5.53 5.53 42.37 3.67
4423 7540 3.892588 AGAAACCCAAATTTCGCTGGTTA 59.107 39.130 9.94 0.00 42.37 2.85
4424 7541 3.934457 AACCCAAATTTCGCTGGTTAG 57.066 42.857 8.45 0.00 37.53 2.34
4425 7542 2.167662 ACCCAAATTTCGCTGGTTAGG 58.832 47.619 0.00 0.00 0.00 2.69
4426 7543 1.476488 CCCAAATTTCGCTGGTTAGGG 59.524 52.381 0.00 0.00 38.16 3.53
4427 7544 1.135112 CCAAATTTCGCTGGTTAGGGC 60.135 52.381 0.00 0.00 36.84 5.19
4428 7545 1.135112 CAAATTTCGCTGGTTAGGGCC 60.135 52.381 0.00 0.00 36.84 5.80
4429 7546 1.029947 AATTTCGCTGGTTAGGGCCG 61.030 55.000 0.00 0.00 36.84 6.13
4430 7547 1.906105 ATTTCGCTGGTTAGGGCCGA 61.906 55.000 0.00 0.00 36.84 5.54
4431 7548 2.114488 TTTCGCTGGTTAGGGCCGAA 62.114 55.000 0.00 0.00 36.84 4.30
4432 7549 2.046700 CGCTGGTTAGGGCCGAAA 60.047 61.111 0.00 0.00 0.00 3.46
4433 7550 1.451387 CGCTGGTTAGGGCCGAAAT 60.451 57.895 0.00 0.00 0.00 2.17
4434 7551 1.029947 CGCTGGTTAGGGCCGAAATT 61.030 55.000 0.00 0.00 0.00 1.82
4435 7552 0.455815 GCTGGTTAGGGCCGAAATTG 59.544 55.000 0.00 0.00 0.00 2.32
4436 7553 1.102978 CTGGTTAGGGCCGAAATTGG 58.897 55.000 0.00 0.00 0.00 3.16
4443 7560 4.829518 GCCGAAATTGGCGCCGAC 62.830 66.667 21.40 5.48 46.75 4.79
4444 7561 4.514569 CCGAAATTGGCGCCGACG 62.515 66.667 21.40 18.29 44.07 5.12
4445 7562 4.514569 CGAAATTGGCGCCGACGG 62.515 66.667 21.40 10.29 40.57 4.79
4446 7563 3.122323 GAAATTGGCGCCGACGGA 61.122 61.111 21.40 0.00 40.57 4.69
4447 7564 2.437716 AAATTGGCGCCGACGGAT 60.438 55.556 21.40 5.85 40.57 4.18
4448 7565 2.374877 GAAATTGGCGCCGACGGATC 62.375 60.000 21.40 11.14 40.57 3.36
4449 7566 4.910585 ATTGGCGCCGACGGATCC 62.911 66.667 21.40 17.43 40.57 3.36
4461 7578 4.547367 GGATCCAGGCCGAACCCG 62.547 72.222 6.95 0.00 40.58 5.28
4462 7579 3.467226 GATCCAGGCCGAACCCGA 61.467 66.667 0.00 0.00 40.58 5.14
4463 7580 3.735037 GATCCAGGCCGAACCCGAC 62.735 68.421 0.00 0.00 40.58 4.79
4500 7617 4.796495 GGCGTCGGGGGAAGCATT 62.796 66.667 4.55 0.00 0.00 3.56
4501 7618 2.750237 GCGTCGGGGGAAGCATTT 60.750 61.111 0.00 0.00 0.00 2.32
4502 7619 2.340328 GCGTCGGGGGAAGCATTTT 61.340 57.895 0.00 0.00 0.00 1.82
4503 7620 1.873270 GCGTCGGGGGAAGCATTTTT 61.873 55.000 0.00 0.00 0.00 1.94
4504 7621 0.109319 CGTCGGGGGAAGCATTTTTG 60.109 55.000 0.00 0.00 0.00 2.44
4505 7622 0.246360 GTCGGGGGAAGCATTTTTGG 59.754 55.000 0.00 0.00 0.00 3.28
4506 7623 1.079197 CGGGGGAAGCATTTTTGGC 60.079 57.895 0.00 0.00 0.00 4.52
4507 7624 1.079197 GGGGGAAGCATTTTTGGCG 60.079 57.895 0.00 0.00 36.08 5.69
4508 7625 1.671166 GGGGAAGCATTTTTGGCGT 59.329 52.632 0.00 0.00 36.08 5.68
4509 7626 0.670239 GGGGAAGCATTTTTGGCGTG 60.670 55.000 0.00 0.00 36.08 5.34
4510 7627 0.316841 GGGAAGCATTTTTGGCGTGA 59.683 50.000 0.00 0.00 36.08 4.35
4511 7628 1.270041 GGGAAGCATTTTTGGCGTGAA 60.270 47.619 0.00 0.00 36.08 3.18
4512 7629 2.478831 GGAAGCATTTTTGGCGTGAAA 58.521 42.857 0.00 0.00 36.08 2.69
4513 7630 2.476241 GGAAGCATTTTTGGCGTGAAAG 59.524 45.455 0.00 0.00 36.08 2.62
4514 7631 2.888834 AGCATTTTTGGCGTGAAAGT 57.111 40.000 0.00 0.00 36.08 2.66
4515 7632 2.742774 AGCATTTTTGGCGTGAAAGTC 58.257 42.857 0.00 0.00 36.08 3.01
4516 7633 1.792367 GCATTTTTGGCGTGAAAGTCC 59.208 47.619 0.00 0.00 0.00 3.85
4517 7634 2.050691 CATTTTTGGCGTGAAAGTCCG 58.949 47.619 0.00 0.00 0.00 4.79
4518 7635 0.382515 TTTTTGGCGTGAAAGTCCGG 59.617 50.000 0.00 0.00 0.00 5.14
4519 7636 0.748729 TTTTGGCGTGAAAGTCCGGT 60.749 50.000 0.00 0.00 0.00 5.28
4520 7637 1.440938 TTTGGCGTGAAAGTCCGGTG 61.441 55.000 0.00 0.00 0.00 4.94
4521 7638 3.047877 GGCGTGAAAGTCCGGTGG 61.048 66.667 0.00 0.00 0.00 4.61
4522 7639 3.047877 GCGTGAAAGTCCGGTGGG 61.048 66.667 0.00 0.00 0.00 4.61
4523 7640 3.047877 CGTGAAAGTCCGGTGGGC 61.048 66.667 0.00 0.00 0.00 5.36
4524 7641 2.671963 GTGAAAGTCCGGTGGGCC 60.672 66.667 0.00 0.00 0.00 5.80
4525 7642 2.852075 TGAAAGTCCGGTGGGCCT 60.852 61.111 4.53 0.00 0.00 5.19
4526 7643 2.359975 GAAAGTCCGGTGGGCCTG 60.360 66.667 4.53 0.00 0.00 4.85
4527 7644 4.660938 AAAGTCCGGTGGGCCTGC 62.661 66.667 4.53 0.00 0.00 4.85
4538 7655 4.424711 GGCCTGCCGGGTCATTGA 62.425 66.667 2.18 0.00 40.02 2.57
4539 7656 2.124151 GCCTGCCGGGTCATTGAT 60.124 61.111 2.18 0.00 37.43 2.57
4540 7657 2.189499 GCCTGCCGGGTCATTGATC 61.189 63.158 2.18 0.00 37.43 2.92
4541 7658 1.224315 CCTGCCGGGTCATTGATCA 59.776 57.895 2.18 0.00 0.00 2.92
4542 7659 0.816825 CCTGCCGGGTCATTGATCAG 60.817 60.000 2.18 0.00 0.00 2.90
4543 7660 1.442526 CTGCCGGGTCATTGATCAGC 61.443 60.000 2.18 1.97 0.00 4.26
4544 7661 1.451927 GCCGGGTCATTGATCAGCA 60.452 57.895 2.18 0.00 0.00 4.41
4545 7662 1.442526 GCCGGGTCATTGATCAGCAG 61.443 60.000 2.18 0.00 0.00 4.24
4546 7663 1.442526 CCGGGTCATTGATCAGCAGC 61.443 60.000 0.00 0.00 0.00 5.25
4547 7664 1.769098 CGGGTCATTGATCAGCAGCG 61.769 60.000 0.00 0.00 0.00 5.18
4548 7665 0.745845 GGGTCATTGATCAGCAGCGT 60.746 55.000 0.00 0.00 0.00 5.07
4549 7666 0.654683 GGTCATTGATCAGCAGCGTC 59.345 55.000 0.00 0.00 0.00 5.19
4550 7667 1.649664 GTCATTGATCAGCAGCGTCT 58.350 50.000 0.00 0.00 0.00 4.18
4551 7668 1.592081 GTCATTGATCAGCAGCGTCTC 59.408 52.381 0.00 0.00 0.00 3.36
4552 7669 0.575859 CATTGATCAGCAGCGTCTCG 59.424 55.000 0.00 0.00 0.00 4.04
4553 7670 0.174389 ATTGATCAGCAGCGTCTCGT 59.826 50.000 0.00 0.00 0.00 4.18
4554 7671 0.456824 TTGATCAGCAGCGTCTCGTC 60.457 55.000 0.00 0.00 0.00 4.20
4555 7672 1.308783 TGATCAGCAGCGTCTCGTCT 61.309 55.000 0.00 0.00 0.00 4.18
4556 7673 0.179150 GATCAGCAGCGTCTCGTCTT 60.179 55.000 0.00 0.00 0.00 3.01
4557 7674 0.179150 ATCAGCAGCGTCTCGTCTTC 60.179 55.000 0.00 0.00 0.00 2.87
4558 7675 1.803519 CAGCAGCGTCTCGTCTTCC 60.804 63.158 0.00 0.00 0.00 3.46
4559 7676 1.974343 AGCAGCGTCTCGTCTTCCT 60.974 57.895 0.00 0.00 0.00 3.36
4560 7677 1.515304 GCAGCGTCTCGTCTTCCTC 60.515 63.158 0.00 0.00 0.00 3.71
4561 7678 1.876664 CAGCGTCTCGTCTTCCTCA 59.123 57.895 0.00 0.00 0.00 3.86
4562 7679 0.453793 CAGCGTCTCGTCTTCCTCAT 59.546 55.000 0.00 0.00 0.00 2.90
4563 7680 0.736053 AGCGTCTCGTCTTCCTCATC 59.264 55.000 0.00 0.00 0.00 2.92
4564 7681 0.590230 GCGTCTCGTCTTCCTCATCG 60.590 60.000 0.00 0.00 0.00 3.84
4565 7682 0.590230 CGTCTCGTCTTCCTCATCGC 60.590 60.000 0.00 0.00 0.00 4.58
4566 7683 0.248702 GTCTCGTCTTCCTCATCGCC 60.249 60.000 0.00 0.00 0.00 5.54
4567 7684 0.394488 TCTCGTCTTCCTCATCGCCT 60.394 55.000 0.00 0.00 0.00 5.52
4568 7685 0.030101 CTCGTCTTCCTCATCGCCTC 59.970 60.000 0.00 0.00 0.00 4.70
4569 7686 1.298713 CGTCTTCCTCATCGCCTCG 60.299 63.158 0.00 0.00 0.00 4.63
4570 7687 1.810532 GTCTTCCTCATCGCCTCGT 59.189 57.895 0.00 0.00 0.00 4.18
4571 7688 0.173708 GTCTTCCTCATCGCCTCGTT 59.826 55.000 0.00 0.00 0.00 3.85
4572 7689 0.895530 TCTTCCTCATCGCCTCGTTT 59.104 50.000 0.00 0.00 0.00 3.60
4573 7690 1.135083 TCTTCCTCATCGCCTCGTTTC 60.135 52.381 0.00 0.00 0.00 2.78
4574 7691 0.108329 TTCCTCATCGCCTCGTTTCC 60.108 55.000 0.00 0.00 0.00 3.13
4575 7692 1.521681 CCTCATCGCCTCGTTTCCC 60.522 63.158 0.00 0.00 0.00 3.97
4576 7693 1.878522 CTCATCGCCTCGTTTCCCG 60.879 63.158 0.00 0.00 38.13 5.14
4577 7694 3.564027 CATCGCCTCGTTTCCCGC 61.564 66.667 0.00 0.00 36.19 6.13
4591 7708 3.595758 CCGCGGGGAATCAATGCC 61.596 66.667 20.10 0.00 39.22 4.40
4592 7709 2.828095 CGCGGGGAATCAATGCCA 60.828 61.111 0.00 0.00 42.44 4.92
4593 7710 2.413963 CGCGGGGAATCAATGCCAA 61.414 57.895 0.00 0.00 42.44 4.52
4594 7711 1.438814 GCGGGGAATCAATGCCAAG 59.561 57.895 0.00 0.00 42.44 3.61
4595 7712 2.019897 GCGGGGAATCAATGCCAAGG 62.020 60.000 0.00 0.00 42.44 3.61
4596 7713 1.825341 GGGGAATCAATGCCAAGGC 59.175 57.895 3.61 3.61 42.44 4.35
4597 7714 0.688749 GGGGAATCAATGCCAAGGCT 60.689 55.000 12.96 0.00 42.44 4.58
4598 7715 0.462789 GGGAATCAATGCCAAGGCTG 59.537 55.000 12.96 3.28 39.85 4.85
4599 7716 1.188863 GGAATCAATGCCAAGGCTGT 58.811 50.000 12.96 0.00 42.51 4.40
4600 7717 1.135721 GGAATCAATGCCAAGGCTGTC 59.864 52.381 12.96 0.00 42.51 3.51
4601 7718 0.813184 AATCAATGCCAAGGCTGTCG 59.187 50.000 12.96 0.00 42.51 4.35
4602 7719 0.322816 ATCAATGCCAAGGCTGTCGT 60.323 50.000 12.96 0.00 42.51 4.34
4603 7720 0.537143 TCAATGCCAAGGCTGTCGTT 60.537 50.000 12.96 0.00 42.51 3.85
4604 7721 0.387622 CAATGCCAAGGCTGTCGTTG 60.388 55.000 12.96 6.10 42.51 4.10
4608 7725 4.454948 CAAGGCTGTCGTTGGTCA 57.545 55.556 0.00 0.00 35.18 4.02
4609 7726 2.238353 CAAGGCTGTCGTTGGTCAG 58.762 57.895 0.00 0.00 35.18 3.51
4613 7730 4.779475 CTGTCGTTGGTCAGCCTT 57.221 55.556 0.00 0.00 35.27 4.35
4614 7731 2.533318 CTGTCGTTGGTCAGCCTTC 58.467 57.895 0.00 0.00 35.27 3.46
4615 7732 0.951040 CTGTCGTTGGTCAGCCTTCC 60.951 60.000 0.00 0.00 35.27 3.46
4616 7733 1.070786 GTCGTTGGTCAGCCTTCCA 59.929 57.895 0.00 0.00 35.27 3.53
4617 7734 0.321653 GTCGTTGGTCAGCCTTCCAT 60.322 55.000 0.00 0.00 33.50 3.41
4618 7735 0.400213 TCGTTGGTCAGCCTTCCATT 59.600 50.000 0.00 0.00 33.50 3.16
4619 7736 0.523072 CGTTGGTCAGCCTTCCATTG 59.477 55.000 0.00 0.00 33.50 2.82
4620 7737 1.881925 CGTTGGTCAGCCTTCCATTGA 60.882 52.381 0.00 0.00 33.50 2.57
4621 7738 2.450476 GTTGGTCAGCCTTCCATTGAT 58.550 47.619 0.00 0.00 33.50 2.57
4622 7739 2.827921 GTTGGTCAGCCTTCCATTGATT 59.172 45.455 0.00 0.00 33.50 2.57
4623 7740 2.726821 TGGTCAGCCTTCCATTGATTC 58.273 47.619 0.00 0.00 35.27 2.52
4624 7741 2.027385 GGTCAGCCTTCCATTGATTCC 58.973 52.381 0.00 0.00 0.00 3.01
4625 7742 2.027385 GTCAGCCTTCCATTGATTCCC 58.973 52.381 0.00 0.00 0.00 3.97
4626 7743 1.063717 TCAGCCTTCCATTGATTCCCC 60.064 52.381 0.00 0.00 0.00 4.81
4627 7744 1.009997 AGCCTTCCATTGATTCCCCA 58.990 50.000 0.00 0.00 0.00 4.96
4628 7745 1.114627 GCCTTCCATTGATTCCCCAC 58.885 55.000 0.00 0.00 0.00 4.61
4629 7746 1.392589 CCTTCCATTGATTCCCCACG 58.607 55.000 0.00 0.00 0.00 4.94
4630 7747 1.392589 CTTCCATTGATTCCCCACGG 58.607 55.000 0.00 0.00 0.00 4.94
4631 7748 0.033601 TTCCATTGATTCCCCACGGG 60.034 55.000 0.00 0.00 46.11 5.28
4632 7749 2.127232 CCATTGATTCCCCACGGGC 61.127 63.158 0.00 0.00 43.94 6.13
4633 7750 2.124320 ATTGATTCCCCACGGGCG 60.124 61.111 0.00 0.00 43.94 6.13
4634 7751 3.714487 ATTGATTCCCCACGGGCGG 62.714 63.158 0.00 0.00 43.94 6.13
4653 7770 4.819761 GCAGTGATGGCTCGGCGA 62.820 66.667 10.14 10.14 0.00 5.54
4654 7771 2.887568 CAGTGATGGCTCGGCGAC 60.888 66.667 4.99 2.89 0.00 5.19
4683 7800 4.446413 CTCCCGCCACCCGTACAC 62.446 72.222 0.00 0.00 34.38 2.90
4686 7803 4.302509 CCGCCACCCGTACACACA 62.303 66.667 0.00 0.00 34.38 3.72
4687 7804 3.039588 CGCCACCCGTACACACAC 61.040 66.667 0.00 0.00 0.00 3.82
4688 7805 3.039588 GCCACCCGTACACACACG 61.040 66.667 0.00 0.00 41.59 4.49
4689 7806 2.418356 CCACCCGTACACACACGT 59.582 61.111 0.00 0.00 40.31 4.49
4690 7807 1.662446 CCACCCGTACACACACGTC 60.662 63.158 0.00 0.00 40.31 4.34
4691 7808 1.361271 CACCCGTACACACACGTCT 59.639 57.895 0.00 0.00 40.31 4.18
4692 7809 0.592637 CACCCGTACACACACGTCTA 59.407 55.000 0.00 0.00 40.31 2.59
4693 7810 0.593128 ACCCGTACACACACGTCTAC 59.407 55.000 0.00 0.00 40.31 2.59
4694 7811 0.877071 CCCGTACACACACGTCTACT 59.123 55.000 0.00 0.00 40.31 2.57
4695 7812 1.400629 CCCGTACACACACGTCTACTG 60.401 57.143 0.00 0.00 40.31 2.74
4696 7813 1.324718 CGTACACACACGTCTACTGC 58.675 55.000 0.00 0.00 37.16 4.40
4697 7814 1.694639 GTACACACACGTCTACTGCC 58.305 55.000 0.00 0.00 0.00 4.85
4698 7815 0.599558 TACACACACGTCTACTGCCC 59.400 55.000 0.00 0.00 0.00 5.36
4699 7816 1.113517 ACACACACGTCTACTGCCCT 61.114 55.000 0.00 0.00 0.00 5.19
4700 7817 0.388649 CACACACGTCTACTGCCCTC 60.389 60.000 0.00 0.00 0.00 4.30
4701 7818 1.215647 CACACGTCTACTGCCCTCC 59.784 63.158 0.00 0.00 0.00 4.30
4702 7819 1.982938 ACACGTCTACTGCCCTCCC 60.983 63.158 0.00 0.00 0.00 4.30
4703 7820 2.754658 ACGTCTACTGCCCTCCCG 60.755 66.667 0.00 0.00 0.00 5.14
4704 7821 3.528370 CGTCTACTGCCCTCCCGG 61.528 72.222 0.00 0.00 0.00 5.73
4713 7830 2.920912 CCCTCCCGGCGGCTATAA 60.921 66.667 23.20 1.50 0.00 0.98
4714 7831 2.513259 CCCTCCCGGCGGCTATAAA 61.513 63.158 23.20 0.00 0.00 1.40
4715 7832 1.448497 CCTCCCGGCGGCTATAAAA 59.552 57.895 23.20 0.00 0.00 1.52
4716 7833 0.179040 CCTCCCGGCGGCTATAAAAA 60.179 55.000 23.20 0.00 0.00 1.94
4717 7834 1.226746 CTCCCGGCGGCTATAAAAAG 58.773 55.000 23.20 3.15 0.00 2.27
4718 7835 0.816421 TCCCGGCGGCTATAAAAAGC 60.816 55.000 23.20 0.00 41.99 3.51
4727 7844 2.307768 GCTATAAAAAGCCACCCCTCC 58.692 52.381 0.00 0.00 36.45 4.30
4728 7845 2.091830 GCTATAAAAAGCCACCCCTCCT 60.092 50.000 0.00 0.00 36.45 3.69
4729 7846 2.828661 ATAAAAAGCCACCCCTCCTC 57.171 50.000 0.00 0.00 0.00 3.71
4730 7847 0.326927 TAAAAAGCCACCCCTCCTCG 59.673 55.000 0.00 0.00 0.00 4.63
4731 7848 3.569200 AAAAGCCACCCCTCCTCGC 62.569 63.158 0.00 0.00 0.00 5.03
4741 7858 4.436998 CTCCTCGCCGGTGGACAC 62.437 72.222 16.49 0.00 32.60 3.67
4744 7861 3.991051 CTCGCCGGTGGACACACT 61.991 66.667 16.49 0.00 46.85 3.55
4745 7862 3.916392 CTCGCCGGTGGACACACTC 62.916 68.421 16.49 0.00 46.85 3.51
4746 7863 3.991051 CGCCGGTGGACACACTCT 61.991 66.667 7.26 0.00 46.85 3.24
4747 7864 2.426023 GCCGGTGGACACACTCTT 59.574 61.111 1.90 0.00 46.85 2.85
4748 7865 1.668151 GCCGGTGGACACACTCTTC 60.668 63.158 1.90 0.00 46.85 2.87
4749 7866 2.050269 CCGGTGGACACACTCTTCT 58.950 57.895 4.69 0.00 46.85 2.85
4750 7867 0.393077 CCGGTGGACACACTCTTCTT 59.607 55.000 4.69 0.00 46.85 2.52
4751 7868 1.605712 CCGGTGGACACACTCTTCTTC 60.606 57.143 4.69 0.00 46.85 2.87
4752 7869 1.784525 GGTGGACACACTCTTCTTCG 58.215 55.000 4.69 0.00 46.85 3.79
4753 7870 1.140816 GTGGACACACTCTTCTTCGC 58.859 55.000 0.00 0.00 44.29 4.70
4754 7871 0.033504 TGGACACACTCTTCTTCGCC 59.966 55.000 0.00 0.00 0.00 5.54
4755 7872 0.670854 GGACACACTCTTCTTCGCCC 60.671 60.000 0.00 0.00 0.00 6.13
4756 7873 1.006102 ACACACTCTTCTTCGCCCG 60.006 57.895 0.00 0.00 0.00 6.13
4757 7874 2.048127 ACACTCTTCTTCGCCCGC 60.048 61.111 0.00 0.00 0.00 6.13
4758 7875 2.048222 CACTCTTCTTCGCCCGCA 60.048 61.111 0.00 0.00 0.00 5.69
4759 7876 1.448540 CACTCTTCTTCGCCCGCAT 60.449 57.895 0.00 0.00 0.00 4.73
4760 7877 1.021390 CACTCTTCTTCGCCCGCATT 61.021 55.000 0.00 0.00 0.00 3.56
4761 7878 0.741221 ACTCTTCTTCGCCCGCATTC 60.741 55.000 0.00 0.00 0.00 2.67
4762 7879 1.432270 CTCTTCTTCGCCCGCATTCC 61.432 60.000 0.00 0.00 0.00 3.01
4763 7880 2.437716 TTCTTCGCCCGCATTCCC 60.438 61.111 0.00 0.00 0.00 3.97
4764 7881 2.876368 CTTCTTCGCCCGCATTCCCT 62.876 60.000 0.00 0.00 0.00 4.20
4765 7882 2.869503 TTCTTCGCCCGCATTCCCTC 62.870 60.000 0.00 0.00 0.00 4.30
4766 7883 3.391665 CTTCGCCCGCATTCCCTCT 62.392 63.158 0.00 0.00 0.00 3.69
4767 7884 3.385749 TTCGCCCGCATTCCCTCTC 62.386 63.158 0.00 0.00 0.00 3.20
4768 7885 3.854669 CGCCCGCATTCCCTCTCT 61.855 66.667 0.00 0.00 0.00 3.10
4769 7886 2.110006 GCCCGCATTCCCTCTCTC 59.890 66.667 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.415090 GCGCAGAGATGCATTTTGAGTT 60.415 45.455 0.30 0.00 34.41 3.01
22 23 1.545759 CAGCGCAGAGATGCATTTTG 58.454 50.000 11.47 0.99 34.41 2.44
213 215 7.236432 ACAACTCTACCCTCATGATATGCTTAT 59.764 37.037 0.00 0.00 0.00 1.73
264 266 0.773014 ACATAGCCATGCCCATGCTA 59.227 50.000 2.75 8.31 37.49 3.49
266 268 1.843368 ATACATAGCCATGCCCATGC 58.157 50.000 2.75 0.00 37.49 4.06
267 269 4.847198 TCTTATACATAGCCATGCCCATG 58.153 43.478 1.28 1.28 35.39 3.66
268 270 5.398353 GGATCTTATACATAGCCATGCCCAT 60.398 44.000 0.00 0.00 35.39 4.00
269 271 4.080356 GGATCTTATACATAGCCATGCCCA 60.080 45.833 0.00 0.00 35.39 5.36
270 272 4.080356 TGGATCTTATACATAGCCATGCCC 60.080 45.833 0.00 0.00 35.39 5.36
271 273 5.102953 TGGATCTTATACATAGCCATGCC 57.897 43.478 0.00 0.00 35.39 4.40
272 274 5.464722 CGATGGATCTTATACATAGCCATGC 59.535 44.000 0.00 0.00 32.82 4.06
317 319 0.178990 AGGGCCCTGACACAAAGAAC 60.179 55.000 28.05 0.00 0.00 3.01
339 2098 1.377690 TCTTGGCCATTCTTACCCCA 58.622 50.000 6.09 0.00 0.00 4.96
354 2113 1.089920 CTTGGTCGATGGCCTTCTTG 58.910 55.000 16.03 2.48 0.00 3.02
371 2130 1.273838 TGTCTGCTACCTCCATCCCTT 60.274 52.381 0.00 0.00 0.00 3.95
400 2159 1.073199 CCCCTTCGACAGCCAACTT 59.927 57.895 0.00 0.00 0.00 2.66
401 2160 1.415672 TTCCCCTTCGACAGCCAACT 61.416 55.000 0.00 0.00 0.00 3.16
408 2167 0.174845 CGTAGCATTCCCCTTCGACA 59.825 55.000 0.00 0.00 0.00 4.35
477 2236 2.203788 ACGGGCTCCCTCTTGTCA 60.204 61.111 3.11 0.00 0.00 3.58
480 2239 1.218316 GTACACGGGCTCCCTCTTG 59.782 63.158 3.11 0.51 0.00 3.02
501 2260 1.679680 TCGGGCACTAATTACTCTCCG 59.320 52.381 0.00 0.00 37.82 4.63
506 2265 3.975168 ACACTTCGGGCACTAATTACT 57.025 42.857 0.00 0.00 0.00 2.24
512 2271 1.271379 CTGTGTACACTTCGGGCACTA 59.729 52.381 25.60 1.56 0.00 2.74
515 2274 1.116536 TCCTGTGTACACTTCGGGCA 61.117 55.000 25.60 3.82 0.00 5.36
522 2281 4.755266 ACACTTTTCTCCTGTGTACACT 57.245 40.909 25.60 0.00 42.26 3.55
537 2296 1.333619 GTCACGGCACATCAACACTTT 59.666 47.619 0.00 0.00 0.00 2.66
538 2297 0.944386 GTCACGGCACATCAACACTT 59.056 50.000 0.00 0.00 0.00 3.16
588 2353 2.158559 CCCGAAACATCATTCACCACA 58.841 47.619 0.00 0.00 0.00 4.17
844 2622 4.039357 CACCGACTCGTCCGCTGT 62.039 66.667 0.00 0.00 0.00 4.40
845 2623 4.778415 CCACCGACTCGTCCGCTG 62.778 72.222 0.00 0.00 0.00 5.18
852 2632 1.644786 GGCCAAATTCCACCGACTCG 61.645 60.000 0.00 0.00 0.00 4.18
935 2717 1.346062 AAGAGCAGAGGCAGAGTCAA 58.654 50.000 0.00 0.00 44.61 3.18
1182 2976 1.606531 CTCCAGAAGCCCCAAGGAG 59.393 63.158 0.00 0.00 39.83 3.69
1200 3000 0.861837 CACAGCCTGAGAACACGAAC 59.138 55.000 0.00 0.00 0.00 3.95
1203 3003 0.532862 AACCACAGCCTGAGAACACG 60.533 55.000 0.00 0.00 0.00 4.49
1213 3013 2.270986 CCTGAAGCCAACCACAGCC 61.271 63.158 0.00 0.00 0.00 4.85
1346 3153 3.470567 GAGCTCGCGACCAACACG 61.471 66.667 3.71 0.00 0.00 4.49
1349 3156 4.719369 ACGGAGCTCGCGACCAAC 62.719 66.667 25.01 0.00 43.89 3.77
1350 3157 4.717629 CACGGAGCTCGCGACCAA 62.718 66.667 25.01 0.00 43.89 3.67
1600 3452 4.806247 GGCAATCTCACACATCTACTGTAC 59.194 45.833 0.00 0.00 35.91 2.90
1783 3635 2.821969 AGGTGCAAACCTGATGAATGTC 59.178 45.455 0.00 0.00 38.98 3.06
2086 3938 9.793259 ATCAGTAGAACACAAAGGAAAAGATAA 57.207 29.630 0.00 0.00 0.00 1.75
2306 4158 5.722021 TGTGATACACAGTGCTTTCTCTA 57.278 39.130 0.00 0.00 39.62 2.43
2326 4178 3.822735 AGCATGCATACAACTTGAACTGT 59.177 39.130 21.98 0.00 0.00 3.55
2328 4180 3.125829 CGAGCATGCATACAACTTGAACT 59.874 43.478 21.98 0.00 0.00 3.01
2365 4217 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
2416 4268 9.381038 TCCCTCTGTAAACTAATATAAGAGCAT 57.619 33.333 0.00 0.00 0.00 3.79
2417 4269 8.777578 TCCCTCTGTAAACTAATATAAGAGCA 57.222 34.615 0.00 0.00 0.00 4.26
2418 4270 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2424 4276 9.585369 GGTAGTACTCCCTCTGTAAACTAATAT 57.415 37.037 0.00 0.00 0.00 1.28
2425 4277 8.785859 AGGTAGTACTCCCTCTGTAAACTAATA 58.214 37.037 0.11 0.00 0.00 0.98
2426 4278 7.650660 AGGTAGTACTCCCTCTGTAAACTAAT 58.349 38.462 0.11 0.00 0.00 1.73
2427 4279 7.037342 AGGTAGTACTCCCTCTGTAAACTAA 57.963 40.000 0.11 0.00 0.00 2.24
2428 4280 6.649041 AGGTAGTACTCCCTCTGTAAACTA 57.351 41.667 0.11 0.00 0.00 2.24
2429 4281 5.533333 AGGTAGTACTCCCTCTGTAAACT 57.467 43.478 0.11 0.00 0.00 2.66
2430 4282 7.894753 ATTAGGTAGTACTCCCTCTGTAAAC 57.105 40.000 10.79 0.00 32.08 2.01
2431 4283 8.755977 CAAATTAGGTAGTACTCCCTCTGTAAA 58.244 37.037 10.79 0.00 32.08 2.01
2432 4284 7.897565 ACAAATTAGGTAGTACTCCCTCTGTAA 59.102 37.037 10.79 0.00 32.08 2.41
2433 4285 7.416731 ACAAATTAGGTAGTACTCCCTCTGTA 58.583 38.462 10.79 0.00 32.08 2.74
2434 4286 6.262207 ACAAATTAGGTAGTACTCCCTCTGT 58.738 40.000 10.79 7.76 32.08 3.41
2435 4287 6.183360 GGACAAATTAGGTAGTACTCCCTCTG 60.183 46.154 10.79 7.18 32.08 3.35
2436 4288 5.898397 GGACAAATTAGGTAGTACTCCCTCT 59.102 44.000 10.79 0.00 32.08 3.69
2437 4289 5.221204 CGGACAAATTAGGTAGTACTCCCTC 60.221 48.000 10.79 0.00 32.08 4.30
2438 4290 4.648307 CGGACAAATTAGGTAGTACTCCCT 59.352 45.833 12.22 12.22 34.74 4.20
2439 4291 4.403752 ACGGACAAATTAGGTAGTACTCCC 59.596 45.833 0.00 0.00 0.00 4.30
2440 4292 5.588958 ACGGACAAATTAGGTAGTACTCC 57.411 43.478 0.00 0.48 0.00 3.85
2441 4293 6.624423 TCAACGGACAAATTAGGTAGTACTC 58.376 40.000 0.00 0.00 0.00 2.59
2442 4294 6.594788 TCAACGGACAAATTAGGTAGTACT 57.405 37.500 0.00 0.00 0.00 2.73
2443 4295 6.183360 GCTTCAACGGACAAATTAGGTAGTAC 60.183 42.308 0.00 0.00 0.00 2.73
2444 4296 5.870978 GCTTCAACGGACAAATTAGGTAGTA 59.129 40.000 0.00 0.00 0.00 1.82
2445 4297 4.694037 GCTTCAACGGACAAATTAGGTAGT 59.306 41.667 0.00 0.00 0.00 2.73
2446 4298 4.094442 GGCTTCAACGGACAAATTAGGTAG 59.906 45.833 0.00 0.00 0.00 3.18
2447 4299 4.004982 GGCTTCAACGGACAAATTAGGTA 58.995 43.478 0.00 0.00 0.00 3.08
2448 4300 2.817844 GGCTTCAACGGACAAATTAGGT 59.182 45.455 0.00 0.00 0.00 3.08
2449 4301 3.081804 AGGCTTCAACGGACAAATTAGG 58.918 45.455 0.00 0.00 0.00 2.69
2450 4302 3.751175 TGAGGCTTCAACGGACAAATTAG 59.249 43.478 0.00 0.00 0.00 1.73
2451 4303 3.745799 TGAGGCTTCAACGGACAAATTA 58.254 40.909 0.00 0.00 0.00 1.40
2452 4304 2.582052 TGAGGCTTCAACGGACAAATT 58.418 42.857 0.00 0.00 0.00 1.82
2453 4305 2.270352 TGAGGCTTCAACGGACAAAT 57.730 45.000 0.00 0.00 0.00 2.32
2454 4306 2.151202 GATGAGGCTTCAACGGACAAA 58.849 47.619 1.33 0.00 36.78 2.83
2455 4307 1.808411 GATGAGGCTTCAACGGACAA 58.192 50.000 1.33 0.00 36.78 3.18
2456 4308 0.389817 CGATGAGGCTTCAACGGACA 60.390 55.000 18.81 0.00 43.40 4.02
2497 4349 9.646427 AGAAAAACTTTGCAAGTGTTATTAACA 57.354 25.926 16.57 5.14 41.91 2.41
2500 4352 9.646427 ACAAGAAAAACTTTGCAAGTGTTATTA 57.354 25.926 16.57 0.00 41.91 0.98
2501 4353 8.442384 CACAAGAAAAACTTTGCAAGTGTTATT 58.558 29.630 16.57 11.65 41.91 1.40
2502 4354 7.602265 ACACAAGAAAAACTTTGCAAGTGTTAT 59.398 29.630 16.57 10.85 41.91 1.89
2503 4355 6.926272 ACACAAGAAAAACTTTGCAAGTGTTA 59.074 30.769 16.57 0.00 41.91 2.41
2504 4356 5.757808 ACACAAGAAAAACTTTGCAAGTGTT 59.242 32.000 12.25 12.25 41.91 3.32
2505 4357 5.177327 CACACAAGAAAAACTTTGCAAGTGT 59.823 36.000 0.00 3.60 41.91 3.55
2506 4358 5.404968 TCACACAAGAAAAACTTTGCAAGTG 59.595 36.000 0.00 2.93 41.91 3.16
2507 4359 5.537188 TCACACAAGAAAAACTTTGCAAGT 58.463 33.333 0.00 0.00 45.46 3.16
2508 4360 6.073873 TGTTCACACAAGAAAAACTTTGCAAG 60.074 34.615 0.00 0.00 36.61 4.01
2509 4361 5.755375 TGTTCACACAAGAAAAACTTTGCAA 59.245 32.000 0.00 0.00 36.61 4.08
2510 4362 5.292765 TGTTCACACAAGAAAAACTTTGCA 58.707 33.333 0.00 0.00 36.61 4.08
2511 4363 5.163963 CCTGTTCACACAAGAAAAACTTTGC 60.164 40.000 0.00 0.00 36.61 3.68
2512 4364 5.163963 GCCTGTTCACACAAGAAAAACTTTG 60.164 40.000 0.00 0.00 36.61 2.77
2513 4365 4.929211 GCCTGTTCACACAAGAAAAACTTT 59.071 37.500 0.00 0.00 36.61 2.66
2514 4366 4.021544 TGCCTGTTCACACAAGAAAAACTT 60.022 37.500 0.00 0.00 39.70 2.66
3294 5171 3.156293 TGCAAACATACAAGTCATGCCT 58.844 40.909 0.00 0.00 34.95 4.75
3400 5277 8.513794 GCACACAATATGCTCAGAAAAAGTCTG 61.514 40.741 0.00 0.00 43.25 3.51
3421 5301 5.509272 CACAATCATATCAAACGAAGCACAC 59.491 40.000 0.00 0.00 0.00 3.82
3430 5310 3.181497 ACTGCGCCACAATCATATCAAAC 60.181 43.478 4.18 0.00 0.00 2.93
3458 5338 3.337358 GGATGGTCCCAAATTTGCAAAG 58.663 45.455 18.19 3.97 0.00 2.77
3471 5351 2.106683 CAAGGAACGCGGATGGTCC 61.107 63.158 12.47 8.97 0.00 4.46
3479 5359 0.171007 ATGCATTTCCAAGGAACGCG 59.829 50.000 3.53 3.53 36.27 6.01
3587 5468 0.175073 ATCGCTAACGGACCCTGAAC 59.825 55.000 0.00 0.00 40.63 3.18
3705 5589 1.069358 CTAGACCTTCAAGGCGATCCC 59.931 57.143 2.20 0.00 39.63 3.85
3856 6387 1.630369 TCCCAGACACATTCTTCAGGG 59.370 52.381 0.00 0.00 36.69 4.45
3982 6537 1.503542 CAAACCGCAGCATCTCCAC 59.496 57.895 0.00 0.00 0.00 4.02
4138 6693 8.344098 GCAGGTCTATATATCCGTATGTAGTTC 58.656 40.741 0.00 0.00 35.02 3.01
4158 6713 8.622157 AGTAGAAAAGAAAAGTTAAAGCAGGTC 58.378 33.333 0.00 0.00 0.00 3.85
4159 6714 8.521170 AGTAGAAAAGAAAAGTTAAAGCAGGT 57.479 30.769 0.00 0.00 0.00 4.00
4160 6715 8.841300 AGAGTAGAAAAGAAAAGTTAAAGCAGG 58.159 33.333 0.00 0.00 0.00 4.85
4161 6716 9.871299 GAGAGTAGAAAAGAAAAGTTAAAGCAG 57.129 33.333 0.00 0.00 0.00 4.24
4162 6717 9.614792 AGAGAGTAGAAAAGAAAAGTTAAAGCA 57.385 29.630 0.00 0.00 0.00 3.91
4165 6720 9.257651 CGGAGAGAGTAGAAAAGAAAAGTTAAA 57.742 33.333 0.00 0.00 0.00 1.52
4166 6721 8.419442 ACGGAGAGAGTAGAAAAGAAAAGTTAA 58.581 33.333 0.00 0.00 0.00 2.01
4167 6722 7.949434 ACGGAGAGAGTAGAAAAGAAAAGTTA 58.051 34.615 0.00 0.00 0.00 2.24
4168 6723 6.818233 ACGGAGAGAGTAGAAAAGAAAAGTT 58.182 36.000 0.00 0.00 0.00 2.66
4169 6724 6.408107 ACGGAGAGAGTAGAAAAGAAAAGT 57.592 37.500 0.00 0.00 0.00 2.66
4170 6725 6.366604 GGAACGGAGAGAGTAGAAAAGAAAAG 59.633 42.308 0.00 0.00 0.00 2.27
4171 6726 6.041751 AGGAACGGAGAGAGTAGAAAAGAAAA 59.958 38.462 0.00 0.00 0.00 2.29
4172 6727 5.539193 AGGAACGGAGAGAGTAGAAAAGAAA 59.461 40.000 0.00 0.00 0.00 2.52
4173 6728 5.078256 AGGAACGGAGAGAGTAGAAAAGAA 58.922 41.667 0.00 0.00 0.00 2.52
4174 6729 4.664392 AGGAACGGAGAGAGTAGAAAAGA 58.336 43.478 0.00 0.00 0.00 2.52
4175 6730 6.512342 TTAGGAACGGAGAGAGTAGAAAAG 57.488 41.667 0.00 0.00 0.00 2.27
4176 6731 6.906157 TTTAGGAACGGAGAGAGTAGAAAA 57.094 37.500 0.00 0.00 0.00 2.29
4177 6732 8.763984 ATATTTAGGAACGGAGAGAGTAGAAA 57.236 34.615 0.00 0.00 0.00 2.52
4178 6733 9.857656 TTATATTTAGGAACGGAGAGAGTAGAA 57.142 33.333 0.00 0.00 0.00 2.10
4179 6734 9.504708 CTTATATTTAGGAACGGAGAGAGTAGA 57.495 37.037 0.00 0.00 0.00 2.59
4180 6735 9.287373 ACTTATATTTAGGAACGGAGAGAGTAG 57.713 37.037 0.00 0.00 0.00 2.57
4181 6736 9.638176 AACTTATATTTAGGAACGGAGAGAGTA 57.362 33.333 0.00 0.00 0.00 2.59
4182 6737 8.536340 AACTTATATTTAGGAACGGAGAGAGT 57.464 34.615 0.00 0.00 0.00 3.24
4183 6738 9.819267 AAAACTTATATTTAGGAACGGAGAGAG 57.181 33.333 0.00 0.00 0.00 3.20
4212 6767 9.874215 CGTATGTAGTTCGTATTGAAATCTCTA 57.126 33.333 0.00 0.00 38.60 2.43
4213 6768 7.861372 CCGTATGTAGTTCGTATTGAAATCTCT 59.139 37.037 0.00 0.00 38.60 3.10
4214 6769 7.859377 TCCGTATGTAGTTCGTATTGAAATCTC 59.141 37.037 0.00 0.00 38.60 2.75
4215 6770 7.709947 TCCGTATGTAGTTCGTATTGAAATCT 58.290 34.615 0.00 0.00 38.60 2.40
4216 6771 7.919313 TCCGTATGTAGTTCGTATTGAAATC 57.081 36.000 0.00 0.00 38.60 2.17
4224 6779 9.534565 GGTCTATATATCCGTATGTAGTTCGTA 57.465 37.037 0.00 0.00 35.02 3.43
4225 6780 8.263640 AGGTCTATATATCCGTATGTAGTTCGT 58.736 37.037 0.00 0.00 35.02 3.85
4226 6781 8.549548 CAGGTCTATATATCCGTATGTAGTTCG 58.450 40.741 0.00 0.00 35.02 3.95
4227 6782 8.344098 GCAGGTCTATATATCCGTATGTAGTTC 58.656 40.741 0.00 0.00 35.02 3.01
4228 6783 8.053963 AGCAGGTCTATATATCCGTATGTAGTT 58.946 37.037 0.00 0.00 35.02 2.24
4229 6784 7.499563 CAGCAGGTCTATATATCCGTATGTAGT 59.500 40.741 0.00 0.00 35.02 2.73
4230 6785 7.499563 ACAGCAGGTCTATATATCCGTATGTAG 59.500 40.741 0.00 0.00 34.86 2.74
4231 6786 7.344134 ACAGCAGGTCTATATATCCGTATGTA 58.656 38.462 0.00 0.00 0.00 2.29
4232 6787 6.188407 ACAGCAGGTCTATATATCCGTATGT 58.812 40.000 0.00 0.00 0.00 2.29
4233 6788 6.701145 ACAGCAGGTCTATATATCCGTATG 57.299 41.667 0.00 0.00 0.00 2.39
4234 6789 8.818622 TTTACAGCAGGTCTATATATCCGTAT 57.181 34.615 0.00 0.00 0.00 3.06
4235 6790 7.338703 CCTTTACAGCAGGTCTATATATCCGTA 59.661 40.741 0.00 0.00 0.00 4.02
4236 6791 6.153000 CCTTTACAGCAGGTCTATATATCCGT 59.847 42.308 0.00 0.00 0.00 4.69
4237 6792 6.405953 CCCTTTACAGCAGGTCTATATATCCG 60.406 46.154 0.00 0.00 0.00 4.18
4238 6793 6.440965 ACCCTTTACAGCAGGTCTATATATCC 59.559 42.308 0.00 0.00 0.00 2.59
4239 6794 7.483580 ACCCTTTACAGCAGGTCTATATATC 57.516 40.000 0.00 0.00 0.00 1.63
4240 6795 7.954056 TGTACCCTTTACAGCAGGTCTATATAT 59.046 37.037 0.00 0.00 33.70 0.86
4241 6796 7.299896 TGTACCCTTTACAGCAGGTCTATATA 58.700 38.462 0.00 0.00 33.70 0.86
4242 6797 6.141083 TGTACCCTTTACAGCAGGTCTATAT 58.859 40.000 0.00 0.00 33.70 0.86
4243 6798 5.521696 TGTACCCTTTACAGCAGGTCTATA 58.478 41.667 0.00 0.00 33.70 1.31
4244 6799 4.359105 TGTACCCTTTACAGCAGGTCTAT 58.641 43.478 0.00 0.00 33.70 1.98
4247 6802 3.629142 ATGTACCCTTTACAGCAGGTC 57.371 47.619 0.00 0.00 33.70 3.85
4252 6807 4.575885 TGAGTGAATGTACCCTTTACAGC 58.424 43.478 0.00 0.00 0.00 4.40
4255 6810 9.227777 AGTAAAATGAGTGAATGTACCCTTTAC 57.772 33.333 0.00 0.00 0.00 2.01
4258 6813 7.119262 CGAAGTAAAATGAGTGAATGTACCCTT 59.881 37.037 0.00 0.00 0.00 3.95
4261 6816 7.360575 ACGAAGTAAAATGAGTGAATGTACC 57.639 36.000 0.00 0.00 41.94 3.34
4359 6914 5.686159 TTTTTAGATGCCGACGGTAAAAA 57.314 34.783 20.38 20.38 32.73 1.94
4369 7486 0.310854 GGGCCGATTTTTAGATGCCG 59.689 55.000 0.00 0.00 39.78 5.69
4373 7490 2.093128 ACGACTGGGCCGATTTTTAGAT 60.093 45.455 0.00 0.00 0.00 1.98
4375 7492 1.396996 CACGACTGGGCCGATTTTTAG 59.603 52.381 0.00 0.00 0.00 1.85
4376 7493 1.444836 CACGACTGGGCCGATTTTTA 58.555 50.000 0.00 0.00 0.00 1.52
4377 7494 1.862602 GCACGACTGGGCCGATTTTT 61.863 55.000 0.00 0.00 0.00 1.94
4378 7495 2.332654 GCACGACTGGGCCGATTTT 61.333 57.895 0.00 0.00 0.00 1.82
4379 7496 2.746277 GCACGACTGGGCCGATTT 60.746 61.111 0.00 0.00 0.00 2.17
4380 7497 3.254024 AAGCACGACTGGGCCGATT 62.254 57.895 0.00 0.00 0.00 3.34
4381 7498 3.665675 GAAGCACGACTGGGCCGAT 62.666 63.158 0.00 0.00 0.00 4.18
4384 7501 4.329545 TGGAAGCACGACTGGGCC 62.330 66.667 0.00 0.00 0.00 5.80
4385 7502 2.731691 TTCTGGAAGCACGACTGGGC 62.732 60.000 0.00 0.00 0.00 5.36
4387 7504 0.868406 GTTTCTGGAAGCACGACTGG 59.132 55.000 0.00 0.00 0.00 4.00
4388 7505 0.868406 GGTTTCTGGAAGCACGACTG 59.132 55.000 0.00 0.00 35.81 3.51
4389 7506 0.250338 GGGTTTCTGGAAGCACGACT 60.250 55.000 0.00 0.00 37.48 4.18
4390 7507 0.534203 TGGGTTTCTGGAAGCACGAC 60.534 55.000 0.00 0.00 37.48 4.34
4392 7509 1.028905 TTTGGGTTTCTGGAAGCACG 58.971 50.000 0.00 0.00 37.48 5.34
4393 7510 3.751479 AATTTGGGTTTCTGGAAGCAC 57.249 42.857 0.00 0.00 37.48 4.40
4394 7511 3.243704 CGAAATTTGGGTTTCTGGAAGCA 60.244 43.478 0.00 0.00 37.48 3.91
4395 7512 3.317150 CGAAATTTGGGTTTCTGGAAGC 58.683 45.455 0.00 0.00 36.25 3.86
4396 7513 3.005791 AGCGAAATTTGGGTTTCTGGAAG 59.994 43.478 0.00 0.00 36.25 3.46
4397 7514 2.962421 AGCGAAATTTGGGTTTCTGGAA 59.038 40.909 0.00 0.00 36.25 3.53
4398 7515 2.295909 CAGCGAAATTTGGGTTTCTGGA 59.704 45.455 1.83 0.00 36.25 3.86
4399 7516 2.610232 CCAGCGAAATTTGGGTTTCTGG 60.610 50.000 1.83 6.24 36.25 3.86
4400 7517 2.035832 ACCAGCGAAATTTGGGTTTCTG 59.964 45.455 1.83 1.11 38.82 3.02
4401 7518 2.316108 ACCAGCGAAATTTGGGTTTCT 58.684 42.857 1.83 0.00 38.82 2.52
4402 7519 2.812358 ACCAGCGAAATTTGGGTTTC 57.188 45.000 1.83 0.00 38.82 2.78
4403 7520 3.006430 CCTAACCAGCGAAATTTGGGTTT 59.994 43.478 14.60 6.54 41.72 3.27
4404 7521 2.560981 CCTAACCAGCGAAATTTGGGTT 59.439 45.455 14.10 14.10 43.74 4.11
4405 7522 2.167662 CCTAACCAGCGAAATTTGGGT 58.832 47.619 0.00 0.00 38.82 4.51
4406 7523 1.476488 CCCTAACCAGCGAAATTTGGG 59.524 52.381 0.00 0.00 38.82 4.12
4407 7524 1.135112 GCCCTAACCAGCGAAATTTGG 60.135 52.381 0.00 0.00 40.38 3.28
4408 7525 1.135112 GGCCCTAACCAGCGAAATTTG 60.135 52.381 0.00 0.00 0.00 2.32
4409 7526 1.182667 GGCCCTAACCAGCGAAATTT 58.817 50.000 0.00 0.00 0.00 1.82
4410 7527 1.029947 CGGCCCTAACCAGCGAAATT 61.030 55.000 0.00 0.00 0.00 1.82
4411 7528 1.451387 CGGCCCTAACCAGCGAAAT 60.451 57.895 0.00 0.00 0.00 2.17
4412 7529 2.046700 CGGCCCTAACCAGCGAAA 60.047 61.111 0.00 0.00 0.00 3.46
4413 7530 2.114488 TTTCGGCCCTAACCAGCGAA 62.114 55.000 0.00 0.00 0.00 4.70
4414 7531 1.906105 ATTTCGGCCCTAACCAGCGA 61.906 55.000 0.00 0.00 0.00 4.93
4415 7532 1.029947 AATTTCGGCCCTAACCAGCG 61.030 55.000 0.00 0.00 0.00 5.18
4416 7533 0.455815 CAATTTCGGCCCTAACCAGC 59.544 55.000 0.00 0.00 0.00 4.85
4417 7534 1.102978 CCAATTTCGGCCCTAACCAG 58.897 55.000 0.00 0.00 0.00 4.00
4418 7535 3.274601 CCAATTTCGGCCCTAACCA 57.725 52.632 0.00 0.00 0.00 3.67
4427 7544 4.514569 CGTCGGCGCCAATTTCGG 62.515 66.667 28.98 8.23 0.00 4.30
4428 7545 4.514569 CCGTCGGCGCCAATTTCG 62.515 66.667 28.98 20.65 36.67 3.46
4429 7546 2.374877 GATCCGTCGGCGCCAATTTC 62.375 60.000 28.98 11.16 36.67 2.17
4430 7547 2.437716 ATCCGTCGGCGCCAATTT 60.438 55.556 28.98 2.07 36.67 1.82
4431 7548 2.895372 GATCCGTCGGCGCCAATT 60.895 61.111 28.98 3.90 36.67 2.32
4432 7549 4.910585 GGATCCGTCGGCGCCAAT 62.911 66.667 28.98 11.09 36.67 3.16
4440 7557 3.833645 TTCGGCCTGGATCCGTCG 61.834 66.667 7.39 7.32 46.49 5.12
4441 7558 2.202892 GTTCGGCCTGGATCCGTC 60.203 66.667 7.39 0.00 46.49 4.79
4442 7559 3.782443 GGTTCGGCCTGGATCCGT 61.782 66.667 7.39 0.00 46.49 4.69
4444 7561 4.547367 CGGGTTCGGCCTGGATCC 62.547 72.222 4.20 4.20 40.02 3.36
4445 7562 3.467226 TCGGGTTCGGCCTGGATC 61.467 66.667 0.00 0.00 43.94 3.36
4446 7563 3.782443 GTCGGGTTCGGCCTGGAT 61.782 66.667 0.00 0.00 43.94 3.41
4483 7600 4.796495 AATGCTTCCCCCGACGCC 62.796 66.667 0.00 0.00 32.39 5.68
4484 7601 1.873270 AAAAATGCTTCCCCCGACGC 61.873 55.000 0.00 0.00 33.95 5.19
4485 7602 0.109319 CAAAAATGCTTCCCCCGACG 60.109 55.000 0.00 0.00 0.00 5.12
4486 7603 0.246360 CCAAAAATGCTTCCCCCGAC 59.754 55.000 0.00 0.00 0.00 4.79
4487 7604 1.540435 GCCAAAAATGCTTCCCCCGA 61.540 55.000 0.00 0.00 0.00 5.14
4488 7605 1.079197 GCCAAAAATGCTTCCCCCG 60.079 57.895 0.00 0.00 0.00 5.73
4489 7606 1.079197 CGCCAAAAATGCTTCCCCC 60.079 57.895 0.00 0.00 0.00 5.40
4490 7607 0.670239 CACGCCAAAAATGCTTCCCC 60.670 55.000 0.00 0.00 0.00 4.81
4491 7608 0.316841 TCACGCCAAAAATGCTTCCC 59.683 50.000 0.00 0.00 0.00 3.97
4492 7609 2.147436 TTCACGCCAAAAATGCTTCC 57.853 45.000 0.00 0.00 0.00 3.46
4493 7610 3.123050 ACTTTCACGCCAAAAATGCTTC 58.877 40.909 0.00 0.00 0.00 3.86
4494 7611 3.123050 GACTTTCACGCCAAAAATGCTT 58.877 40.909 0.00 0.00 0.00 3.91
4495 7612 2.545742 GGACTTTCACGCCAAAAATGCT 60.546 45.455 0.00 0.00 0.00 3.79
4496 7613 1.792367 GGACTTTCACGCCAAAAATGC 59.208 47.619 0.00 0.00 0.00 3.56
4497 7614 2.050691 CGGACTTTCACGCCAAAAATG 58.949 47.619 0.00 0.00 0.00 2.32
4498 7615 1.000717 CCGGACTTTCACGCCAAAAAT 60.001 47.619 0.00 0.00 0.00 1.82
4499 7616 0.382515 CCGGACTTTCACGCCAAAAA 59.617 50.000 0.00 0.00 0.00 1.94
4500 7617 0.748729 ACCGGACTTTCACGCCAAAA 60.749 50.000 9.46 0.00 0.00 2.44
4501 7618 1.153127 ACCGGACTTTCACGCCAAA 60.153 52.632 9.46 0.00 0.00 3.28
4502 7619 1.890041 CACCGGACTTTCACGCCAA 60.890 57.895 9.46 0.00 0.00 4.52
4503 7620 2.280524 CACCGGACTTTCACGCCA 60.281 61.111 9.46 0.00 0.00 5.69
4504 7621 3.047877 CCACCGGACTTTCACGCC 61.048 66.667 9.46 0.00 0.00 5.68
4505 7622 3.047877 CCCACCGGACTTTCACGC 61.048 66.667 9.46 0.00 0.00 5.34
4506 7623 3.047877 GCCCACCGGACTTTCACG 61.048 66.667 9.46 0.00 0.00 4.35
4507 7624 2.671963 GGCCCACCGGACTTTCAC 60.672 66.667 9.46 0.00 32.34 3.18
4521 7638 3.721370 ATCAATGACCCGGCAGGCC 62.721 63.158 0.00 0.00 40.58 5.19
4522 7639 2.124151 ATCAATGACCCGGCAGGC 60.124 61.111 0.00 0.00 40.58 4.85
4523 7640 0.816825 CTGATCAATGACCCGGCAGG 60.817 60.000 0.00 0.00 43.78 4.85
4524 7641 1.442526 GCTGATCAATGACCCGGCAG 61.443 60.000 11.71 0.00 0.00 4.85
4525 7642 1.451927 GCTGATCAATGACCCGGCA 60.452 57.895 11.71 0.00 0.00 5.69
4526 7643 1.442526 CTGCTGATCAATGACCCGGC 61.443 60.000 10.22 10.22 0.00 6.13
4527 7644 1.442526 GCTGCTGATCAATGACCCGG 61.443 60.000 0.00 0.00 0.00 5.73
4528 7645 1.769098 CGCTGCTGATCAATGACCCG 61.769 60.000 0.00 0.00 0.00 5.28
4529 7646 0.745845 ACGCTGCTGATCAATGACCC 60.746 55.000 0.00 0.00 0.00 4.46
4530 7647 0.654683 GACGCTGCTGATCAATGACC 59.345 55.000 0.00 0.00 0.00 4.02
4531 7648 1.592081 GAGACGCTGCTGATCAATGAC 59.408 52.381 0.00 0.00 0.00 3.06
4532 7649 1.800286 CGAGACGCTGCTGATCAATGA 60.800 52.381 0.00 0.00 0.00 2.57
4533 7650 0.575859 CGAGACGCTGCTGATCAATG 59.424 55.000 0.00 0.00 0.00 2.82
4534 7651 0.174389 ACGAGACGCTGCTGATCAAT 59.826 50.000 0.00 0.00 0.00 2.57
4535 7652 0.456824 GACGAGACGCTGCTGATCAA 60.457 55.000 0.00 0.00 0.00 2.57
4536 7653 1.137614 GACGAGACGCTGCTGATCA 59.862 57.895 0.00 0.00 0.00 2.92
4537 7654 0.179150 AAGACGAGACGCTGCTGATC 60.179 55.000 0.00 0.00 0.00 2.92
4538 7655 0.179150 GAAGACGAGACGCTGCTGAT 60.179 55.000 0.00 0.00 0.00 2.90
4539 7656 1.210413 GAAGACGAGACGCTGCTGA 59.790 57.895 0.00 0.00 0.00 4.26
4540 7657 1.803519 GGAAGACGAGACGCTGCTG 60.804 63.158 0.00 0.00 0.00 4.41
4541 7658 1.928706 GAGGAAGACGAGACGCTGCT 61.929 60.000 0.00 0.00 0.00 4.24
4542 7659 1.515304 GAGGAAGACGAGACGCTGC 60.515 63.158 0.00 0.00 0.00 5.25
4543 7660 0.453793 ATGAGGAAGACGAGACGCTG 59.546 55.000 0.00 0.00 0.00 5.18
4544 7661 0.736053 GATGAGGAAGACGAGACGCT 59.264 55.000 0.00 0.00 0.00 5.07
4545 7662 0.590230 CGATGAGGAAGACGAGACGC 60.590 60.000 0.00 0.00 0.00 5.19
4546 7663 0.590230 GCGATGAGGAAGACGAGACG 60.590 60.000 0.00 0.00 0.00 4.18
4547 7664 0.248702 GGCGATGAGGAAGACGAGAC 60.249 60.000 0.00 0.00 0.00 3.36
4548 7665 0.394488 AGGCGATGAGGAAGACGAGA 60.394 55.000 0.00 0.00 0.00 4.04
4549 7666 0.030101 GAGGCGATGAGGAAGACGAG 59.970 60.000 0.00 0.00 0.00 4.18
4550 7667 1.715862 CGAGGCGATGAGGAAGACGA 61.716 60.000 0.00 0.00 0.00 4.20
4551 7668 1.298713 CGAGGCGATGAGGAAGACG 60.299 63.158 0.00 0.00 0.00 4.18
4552 7669 0.173708 AACGAGGCGATGAGGAAGAC 59.826 55.000 0.00 0.00 0.00 3.01
4553 7670 0.895530 AAACGAGGCGATGAGGAAGA 59.104 50.000 0.00 0.00 0.00 2.87
4554 7671 1.281899 GAAACGAGGCGATGAGGAAG 58.718 55.000 0.00 0.00 0.00 3.46
4555 7672 0.108329 GGAAACGAGGCGATGAGGAA 60.108 55.000 0.00 0.00 0.00 3.36
4556 7673 1.515954 GGAAACGAGGCGATGAGGA 59.484 57.895 0.00 0.00 0.00 3.71
4557 7674 1.521681 GGGAAACGAGGCGATGAGG 60.522 63.158 0.00 0.00 0.00 3.86
4558 7675 4.110493 GGGAAACGAGGCGATGAG 57.890 61.111 0.00 0.00 0.00 2.90
4573 7690 3.595758 GCATTGATTCCCCGCGGG 61.596 66.667 37.99 37.99 46.11 6.13
4574 7691 3.595758 GGCATTGATTCCCCGCGG 61.596 66.667 21.04 21.04 0.00 6.46
4575 7692 2.340453 CTTGGCATTGATTCCCCGCG 62.340 60.000 0.00 0.00 0.00 6.46
4576 7693 1.438814 CTTGGCATTGATTCCCCGC 59.561 57.895 0.00 0.00 0.00 6.13
4577 7694 2.019897 GCCTTGGCATTGATTCCCCG 62.020 60.000 6.79 0.00 0.00 5.73
4578 7695 0.688749 AGCCTTGGCATTGATTCCCC 60.689 55.000 14.54 0.00 0.00 4.81
4579 7696 0.462789 CAGCCTTGGCATTGATTCCC 59.537 55.000 14.54 0.00 0.00 3.97
4580 7697 1.135721 GACAGCCTTGGCATTGATTCC 59.864 52.381 14.54 0.00 30.39 3.01
4581 7698 1.202222 CGACAGCCTTGGCATTGATTC 60.202 52.381 14.54 0.00 30.39 2.52
4582 7699 0.813184 CGACAGCCTTGGCATTGATT 59.187 50.000 14.54 0.00 30.39 2.57
4583 7700 0.322816 ACGACAGCCTTGGCATTGAT 60.323 50.000 14.54 0.00 30.39 2.57
4584 7701 0.537143 AACGACAGCCTTGGCATTGA 60.537 50.000 14.54 0.00 30.39 2.57
4585 7702 0.387622 CAACGACAGCCTTGGCATTG 60.388 55.000 14.54 6.87 30.39 2.82
4586 7703 1.526575 CCAACGACAGCCTTGGCATT 61.527 55.000 14.54 0.00 30.82 3.56
4587 7704 1.973281 CCAACGACAGCCTTGGCAT 60.973 57.895 14.54 1.06 30.82 4.40
4588 7705 2.594303 CCAACGACAGCCTTGGCA 60.594 61.111 14.54 0.00 30.82 4.92
4589 7706 2.594592 ACCAACGACAGCCTTGGC 60.595 61.111 2.97 2.97 40.71 4.52
4590 7707 1.227823 TGACCAACGACAGCCTTGG 60.228 57.895 0.00 0.00 42.45 3.61
4591 7708 2.238353 CTGACCAACGACAGCCTTG 58.762 57.895 0.00 0.00 0.00 3.61
4592 7709 4.779475 CTGACCAACGACAGCCTT 57.221 55.556 0.00 0.00 0.00 4.35
4596 7713 0.951040 GGAAGGCTGACCAACGACAG 60.951 60.000 6.18 0.00 39.06 3.51
4597 7714 1.070786 GGAAGGCTGACCAACGACA 59.929 57.895 6.18 0.00 39.06 4.35
4598 7715 0.321653 ATGGAAGGCTGACCAACGAC 60.322 55.000 15.72 0.00 39.69 4.34
4599 7716 0.400213 AATGGAAGGCTGACCAACGA 59.600 50.000 15.72 0.00 39.69 3.85
4600 7717 0.523072 CAATGGAAGGCTGACCAACG 59.477 55.000 15.72 7.81 39.69 4.10
4601 7718 1.909700 TCAATGGAAGGCTGACCAAC 58.090 50.000 15.72 0.00 39.69 3.77
4602 7719 2.905415 ATCAATGGAAGGCTGACCAA 57.095 45.000 15.72 2.83 39.69 3.67
4603 7720 2.621407 GGAATCAATGGAAGGCTGACCA 60.621 50.000 14.45 14.45 39.06 4.02
4604 7721 2.027385 GGAATCAATGGAAGGCTGACC 58.973 52.381 4.34 4.34 0.00 4.02
4605 7722 2.027385 GGGAATCAATGGAAGGCTGAC 58.973 52.381 0.00 0.00 0.00 3.51
4606 7723 1.063717 GGGGAATCAATGGAAGGCTGA 60.064 52.381 0.00 0.00 0.00 4.26
4607 7724 1.342275 TGGGGAATCAATGGAAGGCTG 60.342 52.381 0.00 0.00 0.00 4.85
4608 7725 1.009997 TGGGGAATCAATGGAAGGCT 58.990 50.000 0.00 0.00 0.00 4.58
4609 7726 1.114627 GTGGGGAATCAATGGAAGGC 58.885 55.000 0.00 0.00 0.00 4.35
4610 7727 1.392589 CGTGGGGAATCAATGGAAGG 58.607 55.000 0.00 0.00 0.00 3.46
4611 7728 1.392589 CCGTGGGGAATCAATGGAAG 58.607 55.000 0.00 0.00 34.06 3.46
4612 7729 3.586843 CCGTGGGGAATCAATGGAA 57.413 52.632 0.00 0.00 34.06 3.53
4636 7753 4.819761 TCGCCGAGCCATCACTGC 62.820 66.667 0.00 0.00 0.00 4.40
4637 7754 2.887568 GTCGCCGAGCCATCACTG 60.888 66.667 0.00 0.00 0.00 3.66
4638 7755 4.498520 CGTCGCCGAGCCATCACT 62.499 66.667 0.00 0.00 35.63 3.41
4666 7783 4.446413 GTGTACGGGTGGCGGGAG 62.446 72.222 0.00 0.00 0.00 4.30
4669 7786 4.302509 TGTGTGTACGGGTGGCGG 62.303 66.667 0.00 0.00 0.00 6.13
4670 7787 3.039588 GTGTGTGTACGGGTGGCG 61.040 66.667 0.00 0.00 0.00 5.69
4671 7788 3.039588 CGTGTGTGTACGGGTGGC 61.040 66.667 0.00 0.00 40.22 5.01
4673 7790 3.954836 AGTAGACGTGTGTGTACGGGTG 61.955 54.545 0.00 0.00 46.47 4.61
4674 7791 1.815408 AGTAGACGTGTGTGTACGGGT 60.815 52.381 0.00 0.00 46.47 5.28
4675 7792 0.877071 AGTAGACGTGTGTGTACGGG 59.123 55.000 0.00 0.00 46.47 5.28
4676 7793 1.959747 CAGTAGACGTGTGTGTACGG 58.040 55.000 0.00 0.00 46.47 4.02
4677 7794 1.324718 GCAGTAGACGTGTGTGTACG 58.675 55.000 0.00 0.00 46.47 3.67
4678 7795 1.668047 GGGCAGTAGACGTGTGTGTAC 60.668 57.143 0.00 0.00 43.31 2.90
4679 7796 0.599558 GGGCAGTAGACGTGTGTGTA 59.400 55.000 0.00 0.00 0.00 2.90
4680 7797 1.113517 AGGGCAGTAGACGTGTGTGT 61.114 55.000 0.00 0.00 0.00 3.72
4681 7798 0.388649 GAGGGCAGTAGACGTGTGTG 60.389 60.000 0.00 0.00 0.00 3.82
4682 7799 1.533469 GGAGGGCAGTAGACGTGTGT 61.533 60.000 0.00 0.00 0.00 3.72
4683 7800 1.215647 GGAGGGCAGTAGACGTGTG 59.784 63.158 0.00 0.00 0.00 3.82
4684 7801 1.982938 GGGAGGGCAGTAGACGTGT 60.983 63.158 0.00 0.00 0.00 4.49
4685 7802 2.893398 GGGAGGGCAGTAGACGTG 59.107 66.667 0.00 0.00 0.00 4.49
4686 7803 2.754658 CGGGAGGGCAGTAGACGT 60.755 66.667 0.00 0.00 0.00 4.34
4698 7815 1.226746 CTTTTTATAGCCGCCGGGAG 58.773 55.000 4.77 0.00 34.06 4.30
4699 7816 0.816421 GCTTTTTATAGCCGCCGGGA 60.816 55.000 4.77 0.00 35.06 5.14
4700 7817 1.652563 GCTTTTTATAGCCGCCGGG 59.347 57.895 4.77 0.00 35.06 5.73
4707 7824 2.091830 AGGAGGGGTGGCTTTTTATAGC 60.092 50.000 0.00 0.00 40.48 2.97
4708 7825 3.744530 CGAGGAGGGGTGGCTTTTTATAG 60.745 52.174 0.00 0.00 0.00 1.31
4709 7826 2.171870 CGAGGAGGGGTGGCTTTTTATA 59.828 50.000 0.00 0.00 0.00 0.98
4710 7827 1.064685 CGAGGAGGGGTGGCTTTTTAT 60.065 52.381 0.00 0.00 0.00 1.40
4711 7828 0.326927 CGAGGAGGGGTGGCTTTTTA 59.673 55.000 0.00 0.00 0.00 1.52
4712 7829 1.074951 CGAGGAGGGGTGGCTTTTT 59.925 57.895 0.00 0.00 0.00 1.94
4713 7830 2.757077 CGAGGAGGGGTGGCTTTT 59.243 61.111 0.00 0.00 0.00 2.27
4714 7831 4.035102 GCGAGGAGGGGTGGCTTT 62.035 66.667 0.00 0.00 0.00 3.51
4724 7841 4.436998 GTGTCCACCGGCGAGGAG 62.437 72.222 18.98 0.23 45.00 3.69
4727 7844 3.916392 GAGTGTGTCCACCGGCGAG 62.916 68.421 9.30 0.06 42.88 5.03
4728 7845 3.986006 GAGTGTGTCCACCGGCGA 61.986 66.667 9.30 0.00 42.88 5.54
4729 7846 3.515316 AAGAGTGTGTCCACCGGCG 62.515 63.158 0.00 0.00 42.88 6.46
4730 7847 1.668151 GAAGAGTGTGTCCACCGGC 60.668 63.158 0.00 0.00 42.88 6.13
4731 7848 0.393077 AAGAAGAGTGTGTCCACCGG 59.607 55.000 0.00 0.00 42.88 5.28
4732 7849 1.784525 GAAGAAGAGTGTGTCCACCG 58.215 55.000 0.00 0.00 42.88 4.94
4733 7850 1.784525 CGAAGAAGAGTGTGTCCACC 58.215 55.000 0.00 0.00 42.88 4.61
4734 7851 1.140816 GCGAAGAAGAGTGTGTCCAC 58.859 55.000 0.00 0.00 42.17 4.02
4735 7852 0.033504 GGCGAAGAAGAGTGTGTCCA 59.966 55.000 0.00 0.00 0.00 4.02
4736 7853 0.670854 GGGCGAAGAAGAGTGTGTCC 60.671 60.000 0.00 0.00 0.00 4.02
4737 7854 1.009389 CGGGCGAAGAAGAGTGTGTC 61.009 60.000 0.00 0.00 0.00 3.67
4738 7855 1.006102 CGGGCGAAGAAGAGTGTGT 60.006 57.895 0.00 0.00 0.00 3.72
4739 7856 2.383527 GCGGGCGAAGAAGAGTGTG 61.384 63.158 0.00 0.00 0.00 3.82
4740 7857 2.048127 GCGGGCGAAGAAGAGTGT 60.048 61.111 0.00 0.00 0.00 3.55
4741 7858 1.021390 AATGCGGGCGAAGAAGAGTG 61.021 55.000 0.00 0.00 0.00 3.51
4742 7859 0.741221 GAATGCGGGCGAAGAAGAGT 60.741 55.000 0.00 0.00 0.00 3.24
4743 7860 1.432270 GGAATGCGGGCGAAGAAGAG 61.432 60.000 0.00 0.00 0.00 2.85
4744 7861 1.449601 GGAATGCGGGCGAAGAAGA 60.450 57.895 0.00 0.00 0.00 2.87
4745 7862 2.472909 GGGAATGCGGGCGAAGAAG 61.473 63.158 0.00 0.00 0.00 2.85
4746 7863 2.437716 GGGAATGCGGGCGAAGAA 60.438 61.111 0.00 0.00 0.00 2.52
4747 7864 3.385749 GAGGGAATGCGGGCGAAGA 62.386 63.158 0.00 0.00 0.00 2.87
4748 7865 2.897350 GAGGGAATGCGGGCGAAG 60.897 66.667 0.00 0.00 0.00 3.79
4749 7866 3.385749 GAGAGGGAATGCGGGCGAA 62.386 63.158 0.00 0.00 0.00 4.70
4750 7867 3.849951 GAGAGGGAATGCGGGCGA 61.850 66.667 0.00 0.00 0.00 5.54
4751 7868 3.798954 GAGAGAGGGAATGCGGGCG 62.799 68.421 0.00 0.00 0.00 6.13
4752 7869 2.110006 GAGAGAGGGAATGCGGGC 59.890 66.667 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.