Multiple sequence alignment - TraesCS6D01G222300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G222300 chr6D 100.000 6913 0 0 1 6913 313161049 313167961 0.000000e+00 12767.0
1 TraesCS6D01G222300 chr6D 94.737 456 9 12 2781 3228 313163414 313163862 0.000000e+00 695.0
2 TraesCS6D01G222300 chr6D 94.737 456 9 12 2366 2814 313163829 313164276 0.000000e+00 695.0
3 TraesCS6D01G222300 chr6D 98.630 146 2 0 6668 6813 46497663 46497808 6.880000e-65 259.0
4 TraesCS6D01G222300 chr6D 84.375 224 33 2 998 1220 312827163 312826941 1.170000e-52 219.0
5 TraesCS6D01G222300 chr6A 92.088 1504 80 11 3894 5370 450093223 450094714 0.000000e+00 2082.0
6 TraesCS6D01G222300 chr6A 92.450 649 45 2 5365 6012 450094815 450095460 0.000000e+00 924.0
7 TraesCS6D01G222300 chr6A 84.444 900 82 35 1952 2814 450090315 450091193 0.000000e+00 833.0
8 TraesCS6D01G222300 chr6A 85.531 781 72 30 691 1445 450089063 450089828 0.000000e+00 778.0
9 TraesCS6D01G222300 chr6A 86.099 705 68 16 2782 3476 450090745 450091429 0.000000e+00 732.0
10 TraesCS6D01G222300 chr6A 91.198 409 32 4 3472 3877 450092832 450093239 2.820000e-153 553.0
11 TraesCS6D01G222300 chr6A 83.682 478 31 17 1438 1880 450089875 450090340 2.320000e-109 407.0
12 TraesCS6D01G222300 chr6A 91.775 231 15 3 6359 6586 450095681 450095910 1.120000e-82 318.0
13 TraesCS6D01G222300 chr6A 84.889 225 29 5 998 1220 449698668 449698447 9.020000e-54 222.0
14 TraesCS6D01G222300 chr6A 95.098 102 5 0 6812 6913 450095949 450096050 2.000000e-35 161.0
15 TraesCS6D01G222300 chr6A 97.619 42 1 0 6615 6656 450095909 450095950 9.620000e-09 73.1
16 TraesCS6D01G222300 chr6A 92.157 51 3 1 6025 6074 53160925 53160875 3.460000e-08 71.3
17 TraesCS6D01G222300 chr6B 90.066 1510 128 7 4524 6012 513142865 513141357 0.000000e+00 1938.0
18 TraesCS6D01G222300 chr6B 91.450 1193 46 21 705 1871 513146230 513145068 0.000000e+00 1587.0
19 TraesCS6D01G222300 chr6B 91.429 630 52 2 3894 4521 513143529 513142900 0.000000e+00 863.0
20 TraesCS6D01G222300 chr6B 83.831 569 62 15 3327 3871 513144081 513143519 1.330000e-141 514.0
21 TraesCS6D01G222300 chr6B 81.707 656 66 36 1955 2580 513145080 513144449 1.340000e-136 497.0
22 TraesCS6D01G222300 chr6B 84.055 439 39 15 6106 6539 513141354 513140942 1.810000e-105 394.0
23 TraesCS6D01G222300 chr6B 83.784 222 34 2 998 1218 513686525 513686745 7.030000e-50 209.0
24 TraesCS6D01G222300 chr6B 95.098 102 5 0 6812 6913 513140312 513140211 2.000000e-35 161.0
25 TraesCS6D01G222300 chr6B 87.736 106 11 2 6010 6113 163968037 163967932 9.420000e-24 122.0
26 TraesCS6D01G222300 chr6B 90.625 64 5 1 1880 1942 711633781 711633844 4.440000e-12 84.2
27 TraesCS6D01G222300 chrUn 81.229 1497 247 27 4515 5988 51901492 51902977 0.000000e+00 1177.0
28 TraesCS6D01G222300 chr1B 92.658 681 46 3 4 683 670970842 670970165 0.000000e+00 977.0
29 TraesCS6D01G222300 chr1B 91.824 159 11 2 6654 6811 550418268 550418425 3.250000e-53 220.0
30 TraesCS6D01G222300 chr1A 92.183 678 47 4 4 680 521908590 521909262 0.000000e+00 953.0
31 TraesCS6D01G222300 chr1A 96.875 32 1 0 6021 6052 496440141 496440110 3.000000e-03 54.7
32 TraesCS6D01G222300 chr1A 100.000 28 0 0 2341 2368 540300852 540300879 1.300000e-02 52.8
33 TraesCS6D01G222300 chr5A 91.959 684 47 5 4 683 685985669 685984990 0.000000e+00 952.0
34 TraesCS6D01G222300 chr5A 90.722 679 59 3 6 683 53330775 53330100 0.000000e+00 902.0
35 TraesCS6D01G222300 chr7B 91.777 681 52 3 4 683 504504468 504503791 0.000000e+00 944.0
36 TraesCS6D01G222300 chr4A 91.900 679 48 5 4 680 742293279 742293952 0.000000e+00 942.0
37 TraesCS6D01G222300 chr7A 91.740 678 52 3 4 680 77088173 77088847 0.000000e+00 939.0
38 TraesCS6D01G222300 chr3B 91.716 676 53 2 4 679 807192374 807191702 0.000000e+00 935.0
39 TraesCS6D01G222300 chr3B 94.558 147 8 0 6668 6814 19041027 19040881 1.940000e-55 228.0
40 TraesCS6D01G222300 chr2B 91.593 678 50 4 4 680 197689320 197689991 0.000000e+00 929.0
41 TraesCS6D01G222300 chr2B 88.542 96 9 2 1121 1215 576096712 576096618 1.580000e-21 115.0
42 TraesCS6D01G222300 chr3D 98.630 146 2 0 6668 6813 140782882 140782737 6.880000e-65 259.0
43 TraesCS6D01G222300 chr3D 97.945 146 3 0 6668 6813 172020400 172020255 3.200000e-63 254.0
44 TraesCS6D01G222300 chr3D 85.057 87 12 1 6020 6106 365933622 365933537 3.430000e-13 87.9
45 TraesCS6D01G222300 chr3D 97.826 46 1 0 6029 6074 32252882 32252927 5.750000e-11 80.5
46 TraesCS6D01G222300 chr3D 80.723 83 10 4 3146 3228 538078052 538077976 7.490000e-05 60.2
47 TraesCS6D01G222300 chr7D 96.711 152 5 0 6663 6814 257000496 257000345 3.200000e-63 254.0
48 TraesCS6D01G222300 chr5D 95.973 149 6 0 6666 6814 273530273 273530421 6.930000e-60 243.0
49 TraesCS6D01G222300 chr5D 88.785 107 10 2 6002 6108 460393022 460393126 5.630000e-26 130.0
50 TraesCS6D01G222300 chr5D 88.421 95 9 2 6013 6107 538671018 538670926 5.670000e-21 113.0
51 TraesCS6D01G222300 chr5D 84.615 78 9 2 3151 3228 474747525 474747451 2.670000e-09 75.0
52 TraesCS6D01G222300 chr4D 97.183 142 4 0 6670 6811 101680146 101680005 2.490000e-59 241.0
53 TraesCS6D01G222300 chr4D 94.483 145 8 0 6668 6812 134564115 134564259 2.510000e-54 224.0
54 TraesCS6D01G222300 chr2D 88.421 95 11 0 1121 1215 491814215 491814121 1.580000e-21 115.0
55 TraesCS6D01G222300 chr2A 88.421 95 11 0 1121 1215 636926092 636925998 1.580000e-21 115.0
56 TraesCS6D01G222300 chr5B 87.952 83 9 1 6025 6107 679688792 679688711 5.710000e-16 97.1
57 TraesCS6D01G222300 chr1D 94.872 39 2 0 3190 3228 285608848 285608810 2.080000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G222300 chr6D 313161049 313167961 6912 False 12767.000000 12767 100.000000 1 6913 1 chr6D.!!$F2 6912
1 TraesCS6D01G222300 chr6D 313163414 313164276 862 False 695.000000 695 94.737000 2366 3228 2 chr6D.!!$F3 862
2 TraesCS6D01G222300 chr6A 450089063 450096050 6987 False 686.110000 2082 89.998400 691 6913 10 chr6A.!!$F1 6222
3 TraesCS6D01G222300 chr6B 513140211 513146230 6019 True 850.571429 1938 88.233714 705 6913 7 chr6B.!!$R2 6208
4 TraesCS6D01G222300 chrUn 51901492 51902977 1485 False 1177.000000 1177 81.229000 4515 5988 1 chrUn.!!$F1 1473
5 TraesCS6D01G222300 chr1B 670970165 670970842 677 True 977.000000 977 92.658000 4 683 1 chr1B.!!$R1 679
6 TraesCS6D01G222300 chr1A 521908590 521909262 672 False 953.000000 953 92.183000 4 680 1 chr1A.!!$F1 676
7 TraesCS6D01G222300 chr5A 685984990 685985669 679 True 952.000000 952 91.959000 4 683 1 chr5A.!!$R2 679
8 TraesCS6D01G222300 chr5A 53330100 53330775 675 True 902.000000 902 90.722000 6 683 1 chr5A.!!$R1 677
9 TraesCS6D01G222300 chr7B 504503791 504504468 677 True 944.000000 944 91.777000 4 683 1 chr7B.!!$R1 679
10 TraesCS6D01G222300 chr4A 742293279 742293952 673 False 942.000000 942 91.900000 4 680 1 chr4A.!!$F1 676
11 TraesCS6D01G222300 chr7A 77088173 77088847 674 False 939.000000 939 91.740000 4 680 1 chr7A.!!$F1 676
12 TraesCS6D01G222300 chr3B 807191702 807192374 672 True 935.000000 935 91.716000 4 679 1 chr3B.!!$R2 675
13 TraesCS6D01G222300 chr2B 197689320 197689991 671 False 929.000000 929 91.593000 4 680 1 chr2B.!!$F1 676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
587 593 0.039618 TGACCAAGGGAAAGGCCATC 59.960 55.0 5.01 2.05 38.95 3.51 F
1236 1261 0.038526 GTACACGTACAGGCAGCACT 60.039 55.0 2.45 0.00 36.15 4.40 F
1934 2085 0.099436 GGAAAGATGCATGCGGACAC 59.901 55.0 14.09 2.76 0.00 3.67 F
1935 2086 1.089920 GAAAGATGCATGCGGACACT 58.910 50.0 14.09 4.75 0.00 3.55 F
2162 2313 1.294041 TGGGCCAGTCCATAATCACA 58.706 50.0 0.00 0.00 36.21 3.58 F
3838 5537 1.062258 GCACGACAACCATGCATTTG 58.938 50.0 9.15 9.15 39.23 2.32 F
4671 6404 0.695803 AGGCAGGTAATCCTCAGGGG 60.696 60.0 0.00 0.00 43.07 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1915 2066 0.099436 GTGTCCGCATGCATCTTTCC 59.901 55.000 19.57 0.0 0.00 3.13 R
2048 2199 0.833949 CCTCCACTTCTTAGAGGGGC 59.166 60.000 0.00 0.0 42.98 5.80 R
3650 5345 1.338389 TGCTTGCCGGAGTACCTAAAC 60.338 52.381 5.05 0.0 0.00 2.01 R
3663 5358 5.239525 CCACTTTCCTATAACTATGCTTGCC 59.760 44.000 0.00 0.0 0.00 4.52 R
4029 5729 2.811431 TGTTAGACTTCGGGCACATTTG 59.189 45.455 0.00 0.0 0.00 2.32 R
5069 6816 1.345741 CGTGCCACCCTATCATCATCT 59.654 52.381 0.00 0.0 0.00 2.90 R
6347 8260 0.035439 AGTAATGTTGCAGGGGTCGG 60.035 55.000 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.987855 TTCCATCGAAGGGACGGCT 60.988 57.895 6.88 0.00 33.18 5.52
105 106 2.739996 CCAGCGCCTTGGGAGATCT 61.740 63.158 2.29 0.00 34.46 2.75
106 107 1.523258 CAGCGCCTTGGGAGATCTG 60.523 63.158 2.29 0.00 0.00 2.90
180 181 2.029369 GGTGGCCGTGTTGACGTA 59.971 61.111 0.00 0.00 44.54 3.57
203 204 3.248602 GTGCATTCTAAGCCACGGAATAG 59.751 47.826 0.00 0.00 0.00 1.73
220 221 4.957296 GAATAGTATCATTCCACACCCGT 58.043 43.478 0.00 0.00 0.00 5.28
261 262 1.964223 GAGGAGATGGACCGCAGATTA 59.036 52.381 0.00 0.00 0.00 1.75
295 296 2.808202 GCATAGAGGGCATACACCACAG 60.808 54.545 0.00 0.00 0.00 3.66
359 363 3.057596 CCTATTTTGCAGAACGAGCCAAA 60.058 43.478 0.00 0.00 32.26 3.28
471 475 1.804372 GCTGAAGAGGCGGAGTACATG 60.804 57.143 0.00 0.00 0.00 3.21
482 486 3.393800 CGGAGTACATGCCATCTTTAGG 58.606 50.000 0.00 0.00 0.00 2.69
506 510 6.381133 GGGAACTTCCATACAATTGAATCCTT 59.619 38.462 13.59 0.00 38.64 3.36
587 593 0.039618 TGACCAAGGGAAAGGCCATC 59.960 55.000 5.01 2.05 38.95 3.51
596 602 1.824852 GGAAAGGCCATCGGAAATGTT 59.175 47.619 5.01 0.00 36.34 2.71
614 620 7.121168 GGAAATGTTGATGTTAGAGATCCACAA 59.879 37.037 0.00 0.00 31.40 3.33
680 686 1.134560 GAGGTCAAAGATACGAGGCGT 59.865 52.381 0.00 0.00 44.35 5.68
683 689 2.602878 GTCAAAGATACGAGGCGTGAA 58.397 47.619 2.33 0.00 41.39 3.18
684 690 2.344741 GTCAAAGATACGAGGCGTGAAC 59.655 50.000 2.33 0.00 41.39 3.18
685 691 2.029739 TCAAAGATACGAGGCGTGAACA 60.030 45.455 2.33 0.00 41.39 3.18
686 692 2.930040 CAAAGATACGAGGCGTGAACAT 59.070 45.455 2.33 0.00 41.39 2.71
687 693 2.961526 AGATACGAGGCGTGAACATT 57.038 45.000 2.33 0.00 41.39 2.71
688 694 2.810650 AGATACGAGGCGTGAACATTC 58.189 47.619 2.33 0.00 41.39 2.67
689 695 2.427453 AGATACGAGGCGTGAACATTCT 59.573 45.455 2.33 0.00 41.39 2.40
697 703 3.510360 AGGCGTGAACATTCTAGTACAGT 59.490 43.478 0.00 0.00 0.00 3.55
783 789 1.659233 CCGCAAATCCAACTGTGCA 59.341 52.632 0.00 0.00 36.80 4.57
852 858 4.347453 ACACGGTCCGGCGTACAC 62.347 66.667 17.28 0.00 0.00 2.90
884 899 1.298667 GTCCAGTTGGGGCGTACAT 59.701 57.895 0.00 0.00 37.22 2.29
898 913 4.260620 GGGCGTACATGCTATTTAACACAG 60.261 45.833 0.00 0.00 34.52 3.66
929 944 0.302890 CGCTTCATTCCGCAAGCTAG 59.697 55.000 3.13 0.00 42.51 3.42
933 952 0.179073 TCATTCCGCAAGCTAGAGCC 60.179 55.000 0.00 0.00 43.38 4.70
1234 1259 1.081041 CGTACACGTACAGGCAGCA 60.081 57.895 8.02 0.00 35.87 4.41
1236 1261 0.038526 GTACACGTACAGGCAGCACT 60.039 55.000 2.45 0.00 36.15 4.40
1237 1262 0.242825 TACACGTACAGGCAGCACTC 59.757 55.000 0.00 0.00 0.00 3.51
1238 1263 1.738099 CACGTACAGGCAGCACTCC 60.738 63.158 0.00 0.00 0.00 3.85
1239 1264 2.125512 CGTACAGGCAGCACTCCC 60.126 66.667 0.00 0.00 0.00 4.30
1243 1268 4.007644 CAGGCAGCACTCCCGTGA 62.008 66.667 0.00 0.00 43.97 4.35
1244 1269 3.699894 AGGCAGCACTCCCGTGAG 61.700 66.667 0.00 0.00 43.97 3.51
1255 1280 1.226802 CCCGTGAGATCTGTCTGCG 60.227 63.158 0.00 0.00 33.97 5.18
1279 1304 0.323302 TGGCATGCTTGAGTCGGTTA 59.677 50.000 18.92 0.00 0.00 2.85
1323 1353 8.448615 GTTTCAGTGTATCCATGGTACTTAAAC 58.551 37.037 20.91 20.91 32.10 2.01
1341 1371 4.882842 AAACTTGTTTTGTTCTGGTGGT 57.117 36.364 0.00 0.00 0.00 4.16
1342 1372 4.450082 AACTTGTTTTGTTCTGGTGGTC 57.550 40.909 0.00 0.00 0.00 4.02
1343 1373 2.758423 ACTTGTTTTGTTCTGGTGGTCC 59.242 45.455 0.00 0.00 0.00 4.46
1497 1605 4.125703 CTGATTGTAGAGGCCATGACTTC 58.874 47.826 5.01 0.00 0.00 3.01
1517 1625 2.050691 CTTGTTTTGGTGCGTGTATGC 58.949 47.619 0.00 0.00 0.00 3.14
1654 1762 2.295070 TGCTCTAGCGACACAAGTGTTA 59.705 45.455 7.35 0.00 42.14 2.41
1661 1769 7.372714 TCTAGCGACACAAGTGTTATCTTTTA 58.627 34.615 7.35 0.00 45.05 1.52
1702 1844 3.666797 CGACGTGTGCGCTATGAATATTA 59.333 43.478 9.73 0.00 42.83 0.98
1703 1845 4.431214 CGACGTGTGCGCTATGAATATTAC 60.431 45.833 9.73 0.00 42.83 1.89
1704 1846 4.617959 ACGTGTGCGCTATGAATATTACT 58.382 39.130 9.73 0.00 42.83 2.24
1705 1847 5.765176 ACGTGTGCGCTATGAATATTACTA 58.235 37.500 9.73 0.00 42.83 1.82
1706 1848 5.856986 ACGTGTGCGCTATGAATATTACTAG 59.143 40.000 9.73 0.00 42.83 2.57
1707 1849 5.856986 CGTGTGCGCTATGAATATTACTAGT 59.143 40.000 9.73 0.00 0.00 2.57
1773 1924 5.531122 TCTAGCTACATCAACATGGGTAC 57.469 43.478 0.00 0.00 33.82 3.34
1908 2059 2.444895 AGGTCATCCCTCGGGCTC 60.445 66.667 0.00 0.00 40.71 4.70
1909 2060 2.444895 GGTCATCCCTCGGGCTCT 60.445 66.667 0.00 0.00 34.68 4.09
1910 2061 2.801631 GGTCATCCCTCGGGCTCTG 61.802 68.421 0.00 0.00 34.68 3.35
1911 2062 3.157252 TCATCCCTCGGGCTCTGC 61.157 66.667 0.00 0.00 34.68 4.26
1912 2063 3.473647 CATCCCTCGGGCTCTGCA 61.474 66.667 0.00 0.00 34.68 4.41
1913 2064 2.447379 ATCCCTCGGGCTCTGCAT 60.447 61.111 0.00 0.00 34.68 3.96
1914 2065 2.515071 ATCCCTCGGGCTCTGCATC 61.515 63.158 0.00 0.00 34.68 3.91
1915 2066 4.598894 CCCTCGGGCTCTGCATCG 62.599 72.222 0.00 0.00 0.00 3.84
1916 2067 4.598894 CCTCGGGCTCTGCATCGG 62.599 72.222 0.00 0.00 0.00 4.18
1917 2068 3.531207 CTCGGGCTCTGCATCGGA 61.531 66.667 0.00 0.00 0.00 4.55
1918 2069 3.074369 TCGGGCTCTGCATCGGAA 61.074 61.111 0.00 0.00 0.00 4.30
1919 2070 2.125147 CGGGCTCTGCATCGGAAA 60.125 61.111 0.00 0.00 0.00 3.13
1920 2071 2.176273 CGGGCTCTGCATCGGAAAG 61.176 63.158 0.00 0.00 0.00 2.62
1921 2072 1.221840 GGGCTCTGCATCGGAAAGA 59.778 57.895 0.00 0.00 0.00 2.52
1922 2073 0.179034 GGGCTCTGCATCGGAAAGAT 60.179 55.000 0.00 0.00 41.01 2.40
1930 2081 2.324215 ATCGGAAAGATGCATGCGG 58.676 52.632 14.09 0.00 38.36 5.69
1931 2082 0.179048 ATCGGAAAGATGCATGCGGA 60.179 50.000 14.09 0.00 38.36 5.54
1932 2083 1.089481 TCGGAAAGATGCATGCGGAC 61.089 55.000 14.09 6.83 0.00 4.79
1933 2084 1.368345 CGGAAAGATGCATGCGGACA 61.368 55.000 14.09 0.00 0.00 4.02
1934 2085 0.099436 GGAAAGATGCATGCGGACAC 59.901 55.000 14.09 2.76 0.00 3.67
1935 2086 1.089920 GAAAGATGCATGCGGACACT 58.910 50.000 14.09 4.75 0.00 3.55
1936 2087 1.470098 GAAAGATGCATGCGGACACTT 59.530 47.619 14.09 10.44 0.00 3.16
1937 2088 1.538047 AAGATGCATGCGGACACTTT 58.462 45.000 14.09 0.00 0.00 2.66
1938 2089 2.401583 AGATGCATGCGGACACTTTA 57.598 45.000 14.09 0.00 0.00 1.85
1939 2090 2.923121 AGATGCATGCGGACACTTTAT 58.077 42.857 14.09 0.00 0.00 1.40
1940 2091 3.282021 AGATGCATGCGGACACTTTATT 58.718 40.909 14.09 0.00 0.00 1.40
1941 2092 4.450976 AGATGCATGCGGACACTTTATTA 58.549 39.130 14.09 0.00 0.00 0.98
1942 2093 4.512944 AGATGCATGCGGACACTTTATTAG 59.487 41.667 14.09 0.00 0.00 1.73
1943 2094 3.867857 TGCATGCGGACACTTTATTAGA 58.132 40.909 14.09 0.00 0.00 2.10
1944 2095 3.871006 TGCATGCGGACACTTTATTAGAG 59.129 43.478 14.09 0.00 0.00 2.43
1945 2096 3.303395 GCATGCGGACACTTTATTAGAGC 60.303 47.826 0.00 0.00 0.00 4.09
1946 2097 3.603158 TGCGGACACTTTATTAGAGCA 57.397 42.857 0.00 0.00 0.00 4.26
1947 2098 3.932822 TGCGGACACTTTATTAGAGCAA 58.067 40.909 0.00 0.00 0.00 3.91
1948 2099 4.320023 TGCGGACACTTTATTAGAGCAAA 58.680 39.130 0.00 0.00 0.00 3.68
1949 2100 4.391830 TGCGGACACTTTATTAGAGCAAAG 59.608 41.667 0.00 0.00 37.69 2.77
1950 2101 4.630069 GCGGACACTTTATTAGAGCAAAGA 59.370 41.667 1.36 0.00 35.70 2.52
1951 2102 5.294552 GCGGACACTTTATTAGAGCAAAGAT 59.705 40.000 1.36 0.00 35.70 2.40
1952 2103 6.709643 CGGACACTTTATTAGAGCAAAGATG 58.290 40.000 1.36 0.00 35.70 2.90
1953 2104 6.535150 CGGACACTTTATTAGAGCAAAGATGA 59.465 38.462 1.36 0.00 35.70 2.92
1954 2105 7.064609 CGGACACTTTATTAGAGCAAAGATGAA 59.935 37.037 1.36 0.00 35.70 2.57
1955 2106 8.897752 GGACACTTTATTAGAGCAAAGATGAAT 58.102 33.333 1.36 0.00 35.70 2.57
2073 2224 4.040217 CCCTCTAAGAAGTGGAGGATCATG 59.960 50.000 7.28 0.00 46.82 3.07
2083 2234 2.324541 GGAGGATCATGGTAGCAGAGT 58.675 52.381 0.00 0.00 36.25 3.24
2086 2237 1.542108 GGATCATGGTAGCAGAGTGCC 60.542 57.143 0.00 0.00 46.52 5.01
2162 2313 1.294041 TGGGCCAGTCCATAATCACA 58.706 50.000 0.00 0.00 36.21 3.58
2165 2316 3.657239 TGGGCCAGTCCATAATCACATAT 59.343 43.478 0.00 0.00 36.21 1.78
2184 2339 9.914131 TCACATATGTACATATAGTTTCTCTGC 57.086 33.333 24.50 0.00 33.01 4.26
2185 2340 9.920133 CACATATGTACATATAGTTTCTCTGCT 57.080 33.333 24.50 0.09 33.01 4.24
2277 2456 9.677567 GCTTTTTAGAAATGTTCACTGTGAATA 57.322 29.630 24.44 22.09 38.79 1.75
3261 3478 4.799419 TTTCGTGGTTTCCTCTTTAACG 57.201 40.909 0.00 0.00 0.00 3.18
3293 3510 8.685427 CATCATGGTCATTTATTTCACAACCTA 58.315 33.333 0.00 0.00 0.00 3.08
3315 3532 9.344772 ACCTAACTACTACTCAAGATGTCTATG 57.655 37.037 0.00 0.00 0.00 2.23
3318 3535 8.458573 AACTACTACTCAAGATGTCTATGGAG 57.541 38.462 0.00 0.00 0.00 3.86
3385 3649 7.987750 TTAACACAACATTGCATCTAACCTA 57.012 32.000 0.00 0.00 0.00 3.08
3388 3652 6.913170 ACACAACATTGCATCTAACCTAAAG 58.087 36.000 0.00 0.00 0.00 1.85
3411 3688 5.998363 AGGTCGCATTTTTCTAGAGAACTTT 59.002 36.000 0.00 0.00 33.13 2.66
3412 3689 6.486993 AGGTCGCATTTTTCTAGAGAACTTTT 59.513 34.615 0.00 0.00 33.13 2.27
3413 3690 6.797513 GGTCGCATTTTTCTAGAGAACTTTTC 59.202 38.462 0.00 0.00 33.13 2.29
3414 3691 7.352739 GTCGCATTTTTCTAGAGAACTTTTCA 58.647 34.615 0.00 0.00 33.13 2.69
3415 3692 7.532209 GTCGCATTTTTCTAGAGAACTTTTCAG 59.468 37.037 0.00 0.00 33.13 3.02
3416 3693 7.441157 TCGCATTTTTCTAGAGAACTTTTCAGA 59.559 33.333 0.00 0.00 33.13 3.27
3417 3694 7.743838 CGCATTTTTCTAGAGAACTTTTCAGAG 59.256 37.037 0.00 0.00 33.13 3.35
3418 3695 8.778358 GCATTTTTCTAGAGAACTTTTCAGAGA 58.222 33.333 0.00 0.00 33.13 3.10
3422 3699 9.892130 TTTTCTAGAGAACTTTTCAGAGAAACT 57.108 29.630 0.00 0.00 35.51 2.66
3487 5182 9.083080 ACAACAAAAAGTTATGCAACTCTTTAC 57.917 29.630 11.67 0.00 44.41 2.01
3538 5233 5.852738 CGATAGTGCCAAATCTAAGGATG 57.147 43.478 0.00 0.00 31.75 3.51
3629 5324 2.224606 AGATGAGTTGTGGTGTGCAAG 58.775 47.619 0.00 0.00 0.00 4.01
3632 5327 2.992593 TGAGTTGTGGTGTGCAAGTTA 58.007 42.857 0.00 0.00 30.49 2.24
3650 5345 7.252070 CAAGTTATGCTATGTCGTTTTTGTG 57.748 36.000 0.00 0.00 0.00 3.33
3663 5358 4.507388 TCGTTTTTGTGTTTAGGTACTCCG 59.493 41.667 0.00 0.00 41.75 4.63
3772 5469 5.337578 AAATAATCATTTTCCCGTGGTGG 57.662 39.130 0.00 0.00 29.80 4.61
3789 5486 4.280677 GTGGTGGAATCAAACTCAATTGGA 59.719 41.667 5.42 0.00 0.00 3.53
3828 5527 3.293311 TGACTTAGTAGGCACGACAAC 57.707 47.619 0.00 0.00 33.31 3.32
3838 5537 1.062258 GCACGACAACCATGCATTTG 58.938 50.000 9.15 9.15 39.23 2.32
3844 5543 3.801050 CGACAACCATGCATTTGTTTTCA 59.199 39.130 15.97 0.00 36.06 2.69
3877 5576 9.255304 TGTTTTTATGAATTCTTTAAGTGGTGC 57.745 29.630 7.05 0.00 0.00 5.01
3878 5577 9.255304 GTTTTTATGAATTCTTTAAGTGGTGCA 57.745 29.630 7.05 0.00 0.00 4.57
3879 5578 9.995003 TTTTTATGAATTCTTTAAGTGGTGCAT 57.005 25.926 7.05 0.00 0.00 3.96
3880 5579 9.995003 TTTTATGAATTCTTTAAGTGGTGCATT 57.005 25.926 7.05 0.00 0.00 3.56
3881 5580 9.638239 TTTATGAATTCTTTAAGTGGTGCATTC 57.362 29.630 7.05 0.00 0.00 2.67
3882 5581 5.698832 TGAATTCTTTAAGTGGTGCATTCG 58.301 37.500 7.05 0.00 0.00 3.34
3883 5582 3.552604 TTCTTTAAGTGGTGCATTCGC 57.447 42.857 0.00 0.00 39.24 4.70
3917 5616 8.237811 AGAATTCTTTAAGTGGTGATGTGTTT 57.762 30.769 0.88 0.00 0.00 2.83
3977 5677 6.839124 TTACTAACAATAGTCGTGGGAAGA 57.161 37.500 0.00 0.00 41.49 2.87
3995 5695 8.029522 GTGGGAAGAAAAATAGTTTCTCCATTC 58.970 37.037 10.64 2.65 37.75 2.67
4029 5729 5.644644 GGAATTCAAGTCCATGTCATCAAC 58.355 41.667 7.93 0.00 35.05 3.18
4051 5751 2.851263 ATGTGCCCGAAGTCTAACAA 57.149 45.000 0.00 0.00 0.00 2.83
4137 5837 3.664107 ACTTGAAGCGTGTATGTCACAT 58.336 40.909 0.00 0.00 46.44 3.21
4319 6020 1.220206 CGAGCTTGCTCCATCCACT 59.780 57.895 15.87 0.00 0.00 4.00
4322 6023 2.413142 GCTTGCTCCATCCACTGCC 61.413 63.158 0.00 0.00 0.00 4.85
4355 6056 4.688874 GCTGCCAATATACCAAGGTACCTT 60.689 45.833 21.96 21.96 36.60 3.50
4471 6172 7.595311 ACAACAAACTTGAAAATTCACCTTC 57.405 32.000 0.00 0.00 36.83 3.46
4492 6193 3.627577 TCCTTCTTCACAAAAGCAGTCAC 59.372 43.478 0.00 0.00 0.00 3.67
4497 6198 5.182487 TCTTCACAAAAGCAGTCACTACAA 58.818 37.500 0.00 0.00 0.00 2.41
4521 6222 9.090692 CAAACAAGATCCCATCAAATTATTGTC 57.909 33.333 0.00 0.00 37.79 3.18
4594 6327 2.425592 CACTTGACCCCTGTCGCA 59.574 61.111 0.00 0.00 44.86 5.10
4663 6396 8.817092 ATAGTAAGAGAGATAGGCAGGTAATC 57.183 38.462 0.00 0.00 0.00 1.75
4671 6404 0.695803 AGGCAGGTAATCCTCAGGGG 60.696 60.000 0.00 0.00 43.07 4.79
4673 6406 1.694693 GGCAGGTAATCCTCAGGGGTA 60.695 57.143 0.00 0.00 43.07 3.69
4685 6418 3.947834 CCTCAGGGGTATTGTCATGTTTC 59.052 47.826 0.00 0.00 0.00 2.78
4695 6428 7.981225 GGGTATTGTCATGTTTCTAATTGCAAT 59.019 33.333 5.99 5.99 0.00 3.56
4739 6475 7.011499 ACTAATTATATAACCCATGTGCGGA 57.989 36.000 0.00 0.00 0.00 5.54
4907 6648 6.429078 ACAATACTATACAAGCTCATGGCATG 59.571 38.462 21.42 21.42 44.19 4.06
5026 6773 1.604308 CACCAGAGTGCATGGCCAA 60.604 57.895 10.96 0.00 41.87 4.52
5069 6816 5.818678 TCCAGAGGTTAAGCAACTTTCTA 57.181 39.130 7.52 0.00 34.88 2.10
5105 6852 2.279851 CGTTCTGTGGTGCACGGA 60.280 61.111 11.45 3.62 46.42 4.69
5138 6885 7.476540 AAACCAAAAGACCTTGTAAGTTCTT 57.523 32.000 0.00 0.00 39.13 2.52
5224 6988 1.452108 GGGTGCCTCATGCCACTAC 60.452 63.158 9.70 2.59 40.16 2.73
5358 7124 6.818644 GCCGAATGGACTATATTATGTGACAT 59.181 38.462 2.65 2.65 37.49 3.06
5406 7278 4.730966 TGTAAATGTGGGCTTTCAGGTAA 58.269 39.130 0.00 0.00 0.00 2.85
5407 7279 5.141182 TGTAAATGTGGGCTTTCAGGTAAA 58.859 37.500 0.00 0.00 0.00 2.01
5408 7280 4.871933 AAATGTGGGCTTTCAGGTAAAG 57.128 40.909 0.00 0.00 46.29 1.85
5446 7321 5.878332 ATTAAGTTTGTCACATCGATGCA 57.122 34.783 25.11 12.40 0.00 3.96
5519 7394 8.023128 CACCGGATTATAAATGAAACATCATCC 58.977 37.037 9.46 0.00 0.00 3.51
5545 7420 2.594529 ATCACATTCAACGACGCAAC 57.405 45.000 0.00 0.00 0.00 4.17
5590 7465 4.324563 CCACCTCATTCCTCCAAACTACAT 60.325 45.833 0.00 0.00 0.00 2.29
5624 7499 7.138736 GCAGCATAAAACTTTGAAGTGTTCTA 58.861 34.615 2.67 0.00 37.61 2.10
5625 7500 7.113544 GCAGCATAAAACTTTGAAGTGTTCTAC 59.886 37.037 2.67 0.00 37.61 2.59
5684 7559 5.159209 ACTATGTTGTTGCAGTACGTAGTC 58.841 41.667 17.27 0.00 43.93 2.59
5801 7676 5.661056 TCAAGAGAAGCTTCCTAATCGAA 57.339 39.130 22.81 2.75 33.60 3.71
5901 7776 2.604686 TCCTTGGACTGCTCGGCT 60.605 61.111 0.00 0.00 0.00 5.52
5915 7790 1.685517 CTCGGCTTGAGGAGATGATGA 59.314 52.381 0.00 0.00 41.29 2.92
5926 7802 4.256920 AGGAGATGATGAAAGAACAACCG 58.743 43.478 0.00 0.00 0.00 4.44
5945 7821 0.252742 GGGAGAAAGAGACCAGGGGA 60.253 60.000 0.00 0.00 0.00 4.81
5970 7846 1.511305 CCGAGAGAAGCTACGCCAA 59.489 57.895 0.00 0.00 0.00 4.52
5991 7867 6.164876 CCAAATGAACAAAAGCATATGGACA 58.835 36.000 4.56 0.00 0.00 4.02
6001 7877 1.202177 GCATATGGACAGCAAACCACG 60.202 52.381 4.56 0.00 39.06 4.94
6012 7888 3.058570 CAGCAAACCACGTAAATGCTACA 60.059 43.478 14.40 0.00 44.97 2.74
6013 7889 3.058501 AGCAAACCACGTAAATGCTACAC 60.059 43.478 13.52 0.00 44.92 2.90
6014 7890 3.817238 CAAACCACGTAAATGCTACACC 58.183 45.455 0.00 0.00 0.00 4.16
6015 7891 2.843401 ACCACGTAAATGCTACACCA 57.157 45.000 0.00 0.00 0.00 4.17
6016 7892 3.343941 ACCACGTAAATGCTACACCAT 57.656 42.857 0.00 0.00 0.00 3.55
6018 7894 2.612212 CCACGTAAATGCTACACCATCC 59.388 50.000 0.00 0.00 0.00 3.51
6019 7895 2.284150 CACGTAAATGCTACACCATCCG 59.716 50.000 0.00 0.00 0.00 4.18
6020 7896 2.166870 ACGTAAATGCTACACCATCCGA 59.833 45.455 0.00 0.00 0.00 4.55
6021 7897 3.181469 ACGTAAATGCTACACCATCCGAT 60.181 43.478 0.00 0.00 0.00 4.18
6022 7898 3.428870 CGTAAATGCTACACCATCCGATC 59.571 47.826 0.00 0.00 0.00 3.69
6023 7899 2.154854 AATGCTACACCATCCGATCG 57.845 50.000 8.51 8.51 0.00 3.69
6024 7900 1.328279 ATGCTACACCATCCGATCGA 58.672 50.000 18.66 2.91 0.00 3.59
6025 7901 1.107945 TGCTACACCATCCGATCGAA 58.892 50.000 18.66 0.00 0.00 3.71
6026 7902 1.478916 TGCTACACCATCCGATCGAAA 59.521 47.619 18.66 4.45 0.00 3.46
6027 7903 2.093921 TGCTACACCATCCGATCGAAAA 60.094 45.455 18.66 1.56 0.00 2.29
6028 7904 3.131396 GCTACACCATCCGATCGAAAAT 58.869 45.455 18.66 4.17 0.00 1.82
6029 7905 4.202172 TGCTACACCATCCGATCGAAAATA 60.202 41.667 18.66 0.00 0.00 1.40
6030 7906 4.748102 GCTACACCATCCGATCGAAAATAA 59.252 41.667 18.66 0.00 0.00 1.40
6031 7907 5.107453 GCTACACCATCCGATCGAAAATAAG 60.107 44.000 18.66 5.42 0.00 1.73
6032 7908 4.766375 ACACCATCCGATCGAAAATAAGT 58.234 39.130 18.66 3.96 0.00 2.24
6033 7909 4.570772 ACACCATCCGATCGAAAATAAGTG 59.429 41.667 18.66 17.29 0.00 3.16
6034 7910 4.570772 CACCATCCGATCGAAAATAAGTGT 59.429 41.667 18.66 0.00 0.00 3.55
6035 7911 4.809426 ACCATCCGATCGAAAATAAGTGTC 59.191 41.667 18.66 0.00 0.00 3.67
6036 7912 4.085055 CCATCCGATCGAAAATAAGTGTCG 60.085 45.833 18.66 0.00 36.12 4.35
6037 7913 2.855963 TCCGATCGAAAATAAGTGTCGC 59.144 45.455 18.66 0.00 34.80 5.19
6038 7914 2.346376 CCGATCGAAAATAAGTGTCGCG 60.346 50.000 18.66 0.00 34.80 5.87
6039 7915 2.346376 CGATCGAAAATAAGTGTCGCGG 60.346 50.000 10.26 0.00 34.80 6.46
6040 7916 2.068837 TCGAAAATAAGTGTCGCGGT 57.931 45.000 6.13 0.00 34.80 5.68
6041 7917 2.406130 TCGAAAATAAGTGTCGCGGTT 58.594 42.857 6.13 0.00 34.80 4.44
6042 7918 2.801679 TCGAAAATAAGTGTCGCGGTTT 59.198 40.909 6.13 0.00 34.80 3.27
6043 7919 3.248125 TCGAAAATAAGTGTCGCGGTTTT 59.752 39.130 6.13 3.00 34.80 2.43
6044 7920 3.356658 CGAAAATAAGTGTCGCGGTTTTG 59.643 43.478 6.13 0.00 0.00 2.44
6045 7921 4.529446 GAAAATAAGTGTCGCGGTTTTGA 58.471 39.130 6.13 0.00 0.00 2.69
6046 7922 4.555348 AAATAAGTGTCGCGGTTTTGAA 57.445 36.364 6.13 0.00 0.00 2.69
6047 7923 4.555348 AATAAGTGTCGCGGTTTTGAAA 57.445 36.364 6.13 0.00 0.00 2.69
6048 7924 4.759516 ATAAGTGTCGCGGTTTTGAAAT 57.240 36.364 6.13 0.00 0.00 2.17
6049 7925 5.866335 ATAAGTGTCGCGGTTTTGAAATA 57.134 34.783 6.13 0.00 0.00 1.40
6050 7926 4.555348 AAGTGTCGCGGTTTTGAAATAA 57.445 36.364 6.13 0.00 0.00 1.40
6051 7927 4.141855 AGTGTCGCGGTTTTGAAATAAG 57.858 40.909 6.13 0.00 0.00 1.73
6052 7928 3.058501 AGTGTCGCGGTTTTGAAATAAGG 60.059 43.478 6.13 0.00 0.00 2.69
6053 7929 2.879646 TGTCGCGGTTTTGAAATAAGGT 59.120 40.909 6.13 0.00 0.00 3.50
6054 7930 3.315749 TGTCGCGGTTTTGAAATAAGGTT 59.684 39.130 6.13 0.00 0.00 3.50
6055 7931 4.514441 TGTCGCGGTTTTGAAATAAGGTTA 59.486 37.500 6.13 0.00 0.00 2.85
6056 7932 5.084055 GTCGCGGTTTTGAAATAAGGTTAG 58.916 41.667 6.13 0.00 0.00 2.34
6057 7933 4.756135 TCGCGGTTTTGAAATAAGGTTAGT 59.244 37.500 6.13 0.00 0.00 2.24
6058 7934 5.239087 TCGCGGTTTTGAAATAAGGTTAGTT 59.761 36.000 6.13 0.00 0.00 2.24
6059 7935 5.566395 CGCGGTTTTGAAATAAGGTTAGTTC 59.434 40.000 0.00 3.52 38.01 3.01
6060 7936 6.440436 GCGGTTTTGAAATAAGGTTAGTTCA 58.560 36.000 8.21 8.21 43.40 3.18
6078 7954 6.319141 AGTTCAACCTTAGTTCAAATCTGC 57.681 37.500 0.00 0.00 32.45 4.26
6079 7955 5.049405 AGTTCAACCTTAGTTCAAATCTGCG 60.049 40.000 0.00 0.00 32.45 5.18
6080 7956 4.637276 TCAACCTTAGTTCAAATCTGCGA 58.363 39.130 0.00 0.00 32.45 5.10
6081 7957 4.451096 TCAACCTTAGTTCAAATCTGCGAC 59.549 41.667 0.00 0.00 32.45 5.19
6082 7958 4.002906 ACCTTAGTTCAAATCTGCGACA 57.997 40.909 0.00 0.00 0.00 4.35
6083 7959 3.746492 ACCTTAGTTCAAATCTGCGACAC 59.254 43.478 0.00 0.00 0.00 3.67
6084 7960 3.997021 CCTTAGTTCAAATCTGCGACACT 59.003 43.478 0.00 0.00 0.00 3.55
6085 7961 4.452455 CCTTAGTTCAAATCTGCGACACTT 59.548 41.667 0.00 0.00 0.00 3.16
6086 7962 5.637810 CCTTAGTTCAAATCTGCGACACTTA 59.362 40.000 0.00 0.00 0.00 2.24
6087 7963 6.313905 CCTTAGTTCAAATCTGCGACACTTAT 59.686 38.462 0.00 0.00 0.00 1.73
6088 7964 7.148407 CCTTAGTTCAAATCTGCGACACTTATT 60.148 37.037 0.00 0.00 0.00 1.40
6089 7965 8.766000 TTAGTTCAAATCTGCGACACTTATTA 57.234 30.769 0.00 0.00 0.00 0.98
6090 7966 7.849804 AGTTCAAATCTGCGACACTTATTAT 57.150 32.000 0.00 0.00 0.00 1.28
6091 7967 7.688372 AGTTCAAATCTGCGACACTTATTATG 58.312 34.615 0.00 0.00 0.00 1.90
6092 7968 6.603237 TCAAATCTGCGACACTTATTATGG 57.397 37.500 0.00 0.00 0.00 2.74
6093 7969 6.345298 TCAAATCTGCGACACTTATTATGGA 58.655 36.000 0.00 0.00 0.00 3.41
6094 7970 6.992123 TCAAATCTGCGACACTTATTATGGAT 59.008 34.615 0.00 0.00 0.00 3.41
6095 7971 7.171508 TCAAATCTGCGACACTTATTATGGATC 59.828 37.037 0.00 0.00 0.00 3.36
6096 7972 4.546570 TCTGCGACACTTATTATGGATCG 58.453 43.478 0.00 0.00 0.00 3.69
6097 7973 3.649073 TGCGACACTTATTATGGATCGG 58.351 45.455 0.00 0.00 0.00 4.18
6098 7974 2.993899 GCGACACTTATTATGGATCGGG 59.006 50.000 0.00 0.00 0.00 5.14
6099 7975 3.585862 CGACACTTATTATGGATCGGGG 58.414 50.000 0.00 0.00 0.00 5.73
6100 7976 3.616560 CGACACTTATTATGGATCGGGGG 60.617 52.174 0.00 0.00 0.00 5.40
6135 8013 6.758886 ACTTTTGTTCGTGCAAAATTGGATTA 59.241 30.769 15.83 0.00 44.25 1.75
6146 8024 6.589523 TGCAAAATTGGATTATGTAAGTGTGC 59.410 34.615 0.00 0.00 34.30 4.57
6149 8027 8.986847 CAAAATTGGATTATGTAAGTGTGCAAA 58.013 29.630 0.00 0.00 0.00 3.68
6151 8029 5.637006 TGGATTATGTAAGTGTGCAAACC 57.363 39.130 2.53 0.00 0.00 3.27
6152 8030 5.321102 TGGATTATGTAAGTGTGCAAACCT 58.679 37.500 2.53 0.00 0.00 3.50
6153 8031 5.182950 TGGATTATGTAAGTGTGCAAACCTG 59.817 40.000 2.53 0.00 0.00 4.00
6168 8046 4.662145 CAAACCTGTTTCTGTTGAGTGTC 58.338 43.478 0.00 0.00 0.00 3.67
6195 8077 8.141268 GTGATTCCTCAAGGTTTGACAATTTAA 58.859 33.333 0.00 0.00 35.46 1.52
6199 8081 8.698973 TCCTCAAGGTTTGACAATTTAATACA 57.301 30.769 0.00 0.00 35.46 2.29
6290 8172 2.949177 TTAGGCAAGGCTCAGTTTGA 57.051 45.000 0.00 0.00 0.00 2.69
6301 8183 4.022849 AGGCTCAGTTTGATGTTGCTAAAC 60.023 41.667 0.00 0.00 36.78 2.01
6309 8191 7.862372 CAGTTTGATGTTGCTAAACTATGTTGT 59.138 33.333 0.00 0.00 41.30 3.32
6319 8232 9.891828 TTGCTAAACTATGTTGTGTTAAGATTG 57.108 29.630 0.00 0.00 0.00 2.67
6320 8233 8.020819 TGCTAAACTATGTTGTGTTAAGATTGC 58.979 33.333 0.00 0.00 0.00 3.56
6321 8234 8.237267 GCTAAACTATGTTGTGTTAAGATTGCT 58.763 33.333 0.00 0.00 0.00 3.91
6354 8267 3.650281 TTTTAAGGATTACCCGACCCC 57.350 47.619 0.00 0.00 40.87 4.95
6355 8268 2.574074 TTAAGGATTACCCGACCCCT 57.426 50.000 0.00 0.00 40.87 4.79
6356 8269 1.797320 TAAGGATTACCCGACCCCTG 58.203 55.000 0.00 0.00 40.87 4.45
6357 8270 1.632965 AAGGATTACCCGACCCCTGC 61.633 60.000 0.00 0.00 40.87 4.85
6358 8271 2.372074 GGATTACCCGACCCCTGCA 61.372 63.158 0.00 0.00 0.00 4.41
6359 8272 1.605453 GATTACCCGACCCCTGCAA 59.395 57.895 0.00 0.00 0.00 4.08
6360 8273 0.746923 GATTACCCGACCCCTGCAAC 60.747 60.000 0.00 0.00 0.00 4.17
6361 8274 1.493854 ATTACCCGACCCCTGCAACA 61.494 55.000 0.00 0.00 0.00 3.33
6362 8275 1.493854 TTACCCGACCCCTGCAACAT 61.494 55.000 0.00 0.00 0.00 2.71
6363 8276 1.493854 TACCCGACCCCTGCAACATT 61.494 55.000 0.00 0.00 0.00 2.71
6367 8280 1.613255 CCGACCCCTGCAACATTACTT 60.613 52.381 0.00 0.00 0.00 2.24
6371 8284 5.120399 CGACCCCTGCAACATTACTTAATA 58.880 41.667 0.00 0.00 0.00 0.98
6374 8287 7.519970 CGACCCCTGCAACATTACTTAATAATC 60.520 40.741 0.00 0.00 30.54 1.75
6415 8329 7.778382 ACTCCATATAGCTACCGGAAAATTTTT 59.222 33.333 9.46 0.00 0.00 1.94
6416 8330 7.936584 TCCATATAGCTACCGGAAAATTTTTG 58.063 34.615 9.46 1.24 0.00 2.44
6417 8331 7.776030 TCCATATAGCTACCGGAAAATTTTTGA 59.224 33.333 9.46 0.00 0.00 2.69
6419 8333 9.965824 CATATAGCTACCGGAAAATTTTTGATT 57.034 29.630 9.46 0.00 0.00 2.57
6422 8336 6.330278 AGCTACCGGAAAATTTTTGATTAGC 58.670 36.000 9.46 18.53 0.00 3.09
6445 8359 4.553330 AAACGTCCACCAGAACTATGAT 57.447 40.909 0.00 0.00 0.00 2.45
6448 8362 5.871396 ACGTCCACCAGAACTATGATATT 57.129 39.130 0.00 0.00 0.00 1.28
6613 9043 9.503399 AGTTTTATTCTAAGACCAAAGAACGAT 57.497 29.630 0.00 0.00 34.70 3.73
6654 9095 1.070134 AGCTGCTCGTTAAACTGACCA 59.930 47.619 0.00 0.00 0.00 4.02
6655 9096 1.871039 GCTGCTCGTTAAACTGACCAA 59.129 47.619 0.00 0.00 0.00 3.67
6656 9097 2.484264 GCTGCTCGTTAAACTGACCAAT 59.516 45.455 0.00 0.00 0.00 3.16
6657 9098 3.682858 GCTGCTCGTTAAACTGACCAATA 59.317 43.478 0.00 0.00 0.00 1.90
6658 9099 4.435651 GCTGCTCGTTAAACTGACCAATAC 60.436 45.833 0.00 0.00 0.00 1.89
6659 9100 4.890088 TGCTCGTTAAACTGACCAATACT 58.110 39.130 0.00 0.00 0.00 2.12
6660 9101 6.028146 TGCTCGTTAAACTGACCAATACTA 57.972 37.500 0.00 0.00 0.00 1.82
6661 9102 5.865552 TGCTCGTTAAACTGACCAATACTAC 59.134 40.000 0.00 0.00 0.00 2.73
6662 9103 5.004156 GCTCGTTAAACTGACCAATACTACG 59.996 44.000 0.00 0.00 0.00 3.51
6663 9104 6.252967 TCGTTAAACTGACCAATACTACGA 57.747 37.500 0.00 0.00 32.67 3.43
6664 9105 6.317088 TCGTTAAACTGACCAATACTACGAG 58.683 40.000 0.00 0.00 31.63 4.18
6665 9106 6.149308 TCGTTAAACTGACCAATACTACGAGA 59.851 38.462 0.00 0.00 31.63 4.04
6666 9107 6.250104 CGTTAAACTGACCAATACTACGAGAC 59.750 42.308 0.00 0.00 0.00 3.36
6667 9108 5.979288 AAACTGACCAATACTACGAGACT 57.021 39.130 0.00 0.00 0.00 3.24
6668 9109 8.454106 GTTAAACTGACCAATACTACGAGACTA 58.546 37.037 0.00 0.00 0.00 2.59
6669 9110 7.458409 AAACTGACCAATACTACGAGACTAA 57.542 36.000 0.00 0.00 0.00 2.24
6670 9111 7.458409 AACTGACCAATACTACGAGACTAAA 57.542 36.000 0.00 0.00 0.00 1.85
6671 9112 7.086230 ACTGACCAATACTACGAGACTAAAG 57.914 40.000 0.00 0.00 0.00 1.85
6672 9113 6.095160 ACTGACCAATACTACGAGACTAAAGG 59.905 42.308 0.00 0.00 0.00 3.11
6673 9114 5.163581 TGACCAATACTACGAGACTAAAGGC 60.164 44.000 0.00 0.00 0.00 4.35
6674 9115 4.099113 ACCAATACTACGAGACTAAAGGCC 59.901 45.833 0.00 0.00 0.00 5.19
6675 9116 4.501058 CCAATACTACGAGACTAAAGGCCC 60.501 50.000 0.00 0.00 0.00 5.80
6676 9117 1.101331 ACTACGAGACTAAAGGCCCG 58.899 55.000 0.00 0.00 0.00 6.13
6677 9118 1.101331 CTACGAGACTAAAGGCCCGT 58.899 55.000 0.00 1.11 0.00 5.28
6678 9119 1.475682 CTACGAGACTAAAGGCCCGTT 59.524 52.381 0.00 0.00 0.00 4.44
6679 9120 0.245813 ACGAGACTAAAGGCCCGTTC 59.754 55.000 0.00 0.00 0.00 3.95
6680 9121 0.801067 CGAGACTAAAGGCCCGTTCG 60.801 60.000 0.00 0.00 0.00 3.95
6681 9122 0.459759 GAGACTAAAGGCCCGTTCGG 60.460 60.000 0.00 4.08 0.00 4.30
6682 9123 0.901580 AGACTAAAGGCCCGTTCGGA 60.902 55.000 13.08 0.00 0.00 4.55
6683 9124 0.738762 GACTAAAGGCCCGTTCGGAC 60.739 60.000 13.08 0.24 42.00 4.79
6689 9130 4.144703 GCCCGTTCGGACTCCCTC 62.145 72.222 13.08 0.00 0.00 4.30
6690 9131 3.459063 CCCGTTCGGACTCCCTCC 61.459 72.222 13.08 0.00 35.33 4.30
6691 9132 2.362632 CCGTTCGGACTCCCTCCT 60.363 66.667 5.19 0.00 36.80 3.69
6692 9133 2.711922 CCGTTCGGACTCCCTCCTG 61.712 68.421 5.19 0.00 36.80 3.86
6693 9134 2.579738 GTTCGGACTCCCTCCTGC 59.420 66.667 0.00 0.00 36.80 4.85
6694 9135 1.985116 GTTCGGACTCCCTCCTGCT 60.985 63.158 0.00 0.00 36.80 4.24
6695 9136 1.682684 TTCGGACTCCCTCCTGCTC 60.683 63.158 0.00 0.00 36.80 4.26
6696 9137 2.043450 CGGACTCCCTCCTGCTCT 60.043 66.667 0.00 0.00 36.80 4.09
6697 9138 2.124693 CGGACTCCCTCCTGCTCTC 61.125 68.421 0.00 0.00 36.80 3.20
6698 9139 1.760480 GGACTCCCTCCTGCTCTCC 60.760 68.421 0.00 0.00 35.89 3.71
6699 9140 1.000993 GACTCCCTCCTGCTCTCCA 59.999 63.158 0.00 0.00 0.00 3.86
6700 9141 0.616111 GACTCCCTCCTGCTCTCCAA 60.616 60.000 0.00 0.00 0.00 3.53
6701 9142 0.907230 ACTCCCTCCTGCTCTCCAAC 60.907 60.000 0.00 0.00 0.00 3.77
6702 9143 0.617249 CTCCCTCCTGCTCTCCAACT 60.617 60.000 0.00 0.00 0.00 3.16
6703 9144 0.616111 TCCCTCCTGCTCTCCAACTC 60.616 60.000 0.00 0.00 0.00 3.01
6704 9145 1.621672 CCCTCCTGCTCTCCAACTCC 61.622 65.000 0.00 0.00 0.00 3.85
6705 9146 1.515020 CTCCTGCTCTCCAACTCCG 59.485 63.158 0.00 0.00 0.00 4.63
6706 9147 2.125350 CCTGCTCTCCAACTCCGC 60.125 66.667 0.00 0.00 0.00 5.54
6707 9148 2.654079 CCTGCTCTCCAACTCCGCT 61.654 63.158 0.00 0.00 0.00 5.52
6708 9149 1.153667 CTGCTCTCCAACTCCGCTC 60.154 63.158 0.00 0.00 0.00 5.03
6709 9150 2.185608 GCTCTCCAACTCCGCTCC 59.814 66.667 0.00 0.00 0.00 4.70
6710 9151 2.492090 CTCTCCAACTCCGCTCCG 59.508 66.667 0.00 0.00 0.00 4.63
6743 9184 5.633830 ACATGCAGTGTTAATTTGAGGAG 57.366 39.130 0.00 0.00 38.01 3.69
6744 9185 4.082571 ACATGCAGTGTTAATTTGAGGAGC 60.083 41.667 0.00 0.00 38.01 4.70
6745 9186 3.754965 TGCAGTGTTAATTTGAGGAGCT 58.245 40.909 0.00 0.00 0.00 4.09
6746 9187 3.503363 TGCAGTGTTAATTTGAGGAGCTG 59.497 43.478 0.00 0.00 0.00 4.24
6747 9188 3.671702 GCAGTGTTAATTTGAGGAGCTGC 60.672 47.826 0.00 0.00 39.65 5.25
6748 9189 3.755378 CAGTGTTAATTTGAGGAGCTGCT 59.245 43.478 7.79 7.79 0.00 4.24
6749 9190 4.937620 CAGTGTTAATTTGAGGAGCTGCTA 59.062 41.667 8.12 0.00 0.00 3.49
6750 9191 5.412594 CAGTGTTAATTTGAGGAGCTGCTAA 59.587 40.000 8.12 0.00 0.00 3.09
6751 9192 6.094603 CAGTGTTAATTTGAGGAGCTGCTAAT 59.905 38.462 8.12 2.08 0.00 1.73
6752 9193 7.280876 CAGTGTTAATTTGAGGAGCTGCTAATA 59.719 37.037 8.12 0.00 0.00 0.98
6753 9194 7.281100 AGTGTTAATTTGAGGAGCTGCTAATAC 59.719 37.037 8.12 6.35 0.00 1.89
6754 9195 6.257849 TGTTAATTTGAGGAGCTGCTAATACG 59.742 38.462 8.12 0.00 0.00 3.06
6755 9196 4.672587 ATTTGAGGAGCTGCTAATACGA 57.327 40.909 8.12 0.00 0.00 3.43
6756 9197 4.672587 TTTGAGGAGCTGCTAATACGAT 57.327 40.909 8.12 0.00 0.00 3.73
6757 9198 3.650070 TGAGGAGCTGCTAATACGATG 57.350 47.619 8.12 0.00 0.00 3.84
6758 9199 2.288457 TGAGGAGCTGCTAATACGATGC 60.288 50.000 8.12 0.00 0.00 3.91
6759 9200 1.967066 AGGAGCTGCTAATACGATGCT 59.033 47.619 5.69 0.00 0.00 3.79
6760 9201 2.029470 AGGAGCTGCTAATACGATGCTC 60.029 50.000 5.69 0.00 44.08 4.26
6761 9202 2.333014 GAGCTGCTAATACGATGCTCC 58.667 52.381 0.15 0.00 40.44 4.70
6762 9203 1.688735 AGCTGCTAATACGATGCTCCA 59.311 47.619 0.00 0.00 0.00 3.86
6763 9204 1.795286 GCTGCTAATACGATGCTCCAC 59.205 52.381 0.00 0.00 0.00 4.02
6764 9205 2.408050 CTGCTAATACGATGCTCCACC 58.592 52.381 0.00 0.00 0.00 4.61
6765 9206 1.070134 TGCTAATACGATGCTCCACCC 59.930 52.381 0.00 0.00 0.00 4.61
6766 9207 1.935300 GCTAATACGATGCTCCACCCG 60.935 57.143 0.00 0.00 0.00 5.28
6767 9208 0.032952 TAATACGATGCTCCACCCGC 59.967 55.000 0.00 0.00 0.00 6.13
6768 9209 1.686325 AATACGATGCTCCACCCGCT 61.686 55.000 0.00 0.00 0.00 5.52
6769 9210 2.088674 ATACGATGCTCCACCCGCTC 62.089 60.000 0.00 0.00 0.00 5.03
6770 9211 4.899239 CGATGCTCCACCCGCTCC 62.899 72.222 0.00 0.00 0.00 4.70
6771 9212 4.899239 GATGCTCCACCCGCTCCG 62.899 72.222 0.00 0.00 0.00 4.63
6790 9231 2.037367 TCCCGAGTGGAGGAGTGG 59.963 66.667 0.00 0.00 38.61 4.00
6791 9232 2.037367 CCCGAGTGGAGGAGTGGA 59.963 66.667 0.00 0.00 37.49 4.02
6792 9233 2.055042 CCCGAGTGGAGGAGTGGAG 61.055 68.421 0.00 0.00 37.49 3.86
6793 9234 2.055042 CCGAGTGGAGGAGTGGAGG 61.055 68.421 0.00 0.00 37.49 4.30
6794 9235 2.055042 CGAGTGGAGGAGTGGAGGG 61.055 68.421 0.00 0.00 0.00 4.30
6795 9236 2.284995 AGTGGAGGAGTGGAGGGC 60.285 66.667 0.00 0.00 0.00 5.19
6796 9237 2.284995 GTGGAGGAGTGGAGGGCT 60.285 66.667 0.00 0.00 0.00 5.19
6797 9238 1.001760 GTGGAGGAGTGGAGGGCTA 59.998 63.158 0.00 0.00 0.00 3.93
6798 9239 1.001760 TGGAGGAGTGGAGGGCTAC 59.998 63.158 0.00 0.00 0.00 3.58
6799 9240 1.762858 GGAGGAGTGGAGGGCTACC 60.763 68.421 0.00 0.00 0.00 3.18
6800 9241 2.042843 AGGAGTGGAGGGCTACCG 60.043 66.667 0.00 0.00 43.47 4.02
6801 9242 2.043248 GGAGTGGAGGGCTACCGA 60.043 66.667 0.00 0.00 43.47 4.69
6802 9243 1.684734 GGAGTGGAGGGCTACCGAA 60.685 63.158 0.00 0.00 43.47 4.30
6803 9244 1.516423 GAGTGGAGGGCTACCGAAC 59.484 63.158 0.00 0.00 43.47 3.95
6804 9245 1.229082 AGTGGAGGGCTACCGAACA 60.229 57.895 0.00 0.00 43.47 3.18
6805 9246 1.079336 GTGGAGGGCTACCGAACAC 60.079 63.158 0.00 0.00 43.47 3.32
6806 9247 1.534476 TGGAGGGCTACCGAACACA 60.534 57.895 0.00 0.00 43.47 3.72
6807 9248 1.218316 GGAGGGCTACCGAACACAG 59.782 63.158 0.00 0.00 43.47 3.66
6808 9249 1.448013 GAGGGCTACCGAACACAGC 60.448 63.158 0.00 0.00 43.47 4.40
6817 9258 1.068474 CCGAACACAGCCTAAGAACG 58.932 55.000 0.00 0.00 0.00 3.95
6821 9262 1.226746 ACACAGCCTAAGAACGCAAC 58.773 50.000 0.00 0.00 0.00 4.17
6822 9263 0.517316 CACAGCCTAAGAACGCAACC 59.483 55.000 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.151554 TGCTAGAGTCTTCCGTAACACA 58.848 45.455 0.00 0.00 0.00 3.72
105 106 2.080693 GCAACATACACATTCGGGTCA 58.919 47.619 0.00 0.00 0.00 4.02
106 107 2.095853 CAGCAACATACACATTCGGGTC 59.904 50.000 0.00 0.00 0.00 4.46
180 181 0.613260 TCCGTGGCTTAGAATGCACT 59.387 50.000 0.00 0.00 0.00 4.40
189 190 5.790593 GGAATGATACTATTCCGTGGCTTA 58.209 41.667 0.00 0.00 44.68 3.09
203 204 3.383825 ACTCTACGGGTGTGGAATGATAC 59.616 47.826 0.00 0.00 34.95 2.24
220 221 3.450817 TCTTCCAATGCCGATTCACTCTA 59.549 43.478 0.00 0.00 0.00 2.43
261 262 4.142093 GCCCTCTATGCAAACAATGTCAAT 60.142 41.667 0.00 0.00 0.00 2.57
328 329 5.189180 GTTCTGCAAAATAGGATCTGGACT 58.811 41.667 0.00 0.00 0.00 3.85
424 428 1.138859 GGCACAGTTTGAAGGGCTTTT 59.861 47.619 0.00 0.00 0.00 2.27
425 429 0.752658 GGCACAGTTTGAAGGGCTTT 59.247 50.000 0.00 0.00 0.00 3.51
471 475 3.366052 TGGAAGTTCCCTAAAGATGGC 57.634 47.619 19.42 0.00 35.03 4.40
482 486 7.410120 AAGGATTCAATTGTATGGAAGTTCC 57.590 36.000 15.50 15.50 36.96 3.62
587 593 5.817296 TGGATCTCTAACATCAACATTTCCG 59.183 40.000 0.00 0.00 0.00 4.30
596 602 7.448161 ACAACAATTTGTGGATCTCTAACATCA 59.552 33.333 10.93 0.00 44.66 3.07
614 620 3.254166 CCAGCAAGCTCTACACAACAATT 59.746 43.478 0.00 0.00 0.00 2.32
707 713 7.769044 GCCTGTCCAGATTTTAGACATAAAGTA 59.231 37.037 0.00 0.00 39.64 2.24
710 716 6.480763 TGCCTGTCCAGATTTTAGACATAAA 58.519 36.000 0.00 0.00 39.64 1.40
721 727 2.619074 GGTTAGCTTGCCTGTCCAGATT 60.619 50.000 0.00 0.00 0.00 2.40
722 728 1.065126 GGTTAGCTTGCCTGTCCAGAT 60.065 52.381 0.00 0.00 0.00 2.90
723 729 0.324943 GGTTAGCTTGCCTGTCCAGA 59.675 55.000 0.00 0.00 0.00 3.86
724 730 1.021390 CGGTTAGCTTGCCTGTCCAG 61.021 60.000 0.00 0.00 0.00 3.86
852 858 3.904136 ACTGGACAGAAGAAAAATGCG 57.096 42.857 6.29 0.00 0.00 4.73
925 940 4.874977 GCGGTGTCGGGCTCTAGC 62.875 72.222 0.00 0.00 37.29 3.42
954 973 4.647615 ACGAAGTGCACGCTCGCT 62.648 61.111 31.42 20.86 42.51 4.93
1033 1058 4.521062 GCTCAGCAGGTCGCCGAT 62.521 66.667 0.00 0.00 44.04 4.18
1222 1247 2.125512 GGGAGTGCTGCCTGTACG 60.126 66.667 2.32 0.00 38.15 3.67
1224 1249 2.603473 ACGGGAGTGCTGCCTGTA 60.603 61.111 8.09 0.00 43.07 2.74
1234 1259 1.468985 CAGACAGATCTCACGGGAGT 58.531 55.000 15.72 1.53 42.05 3.85
1236 1261 1.657751 CGCAGACAGATCTCACGGGA 61.658 60.000 0.00 0.00 30.42 5.14
1237 1262 1.226802 CGCAGACAGATCTCACGGG 60.227 63.158 0.00 0.00 30.42 5.28
1238 1263 0.524392 GACGCAGACAGATCTCACGG 60.524 60.000 0.00 0.00 36.36 4.94
1239 1264 0.524392 GGACGCAGACAGATCTCACG 60.524 60.000 0.00 0.00 37.50 4.35
1243 1268 0.463204 CCATGGACGCAGACAGATCT 59.537 55.000 5.56 0.00 34.57 2.75
1244 1269 1.156645 GCCATGGACGCAGACAGATC 61.157 60.000 18.40 0.00 0.00 2.75
1255 1280 0.737219 GACTCAAGCATGCCATGGAC 59.263 55.000 18.40 7.64 0.00 4.02
1279 1304 2.226962 ACTGAAATTCATGGCCAGCT 57.773 45.000 13.05 0.00 0.00 4.24
1323 1353 2.757868 TGGACCACCAGAACAAAACAAG 59.242 45.455 0.00 0.00 41.77 3.16
1341 1371 1.304282 GCCCCAAGCTGAAGATGGA 59.696 57.895 2.79 0.00 38.99 3.41
1342 1372 3.930504 GCCCCAAGCTGAAGATGG 58.069 61.111 0.00 0.00 38.99 3.51
1435 1485 2.997485 ATCAAGTTTTTCAGCGGCTC 57.003 45.000 0.00 0.00 0.00 4.70
1497 1605 2.050691 GCATACACGCACCAAAACAAG 58.949 47.619 0.00 0.00 0.00 3.16
1532 1640 2.281900 CGCCGGGAAGGAAACCAA 60.282 61.111 2.18 0.00 45.00 3.67
1661 1769 5.854338 ACGTCGCAATTATGAAACGAAAAAT 59.146 32.000 9.38 0.00 38.55 1.82
1702 1844 6.410942 ACTTTGGGTTTAACGAGTACTAGT 57.589 37.500 2.38 2.38 0.00 2.57
1703 1845 6.146673 CCAACTTTGGGTTTAACGAGTACTAG 59.853 42.308 0.00 0.00 44.70 2.57
1704 1846 5.990996 CCAACTTTGGGTTTAACGAGTACTA 59.009 40.000 0.00 0.00 44.70 1.82
1705 1847 4.818005 CCAACTTTGGGTTTAACGAGTACT 59.182 41.667 0.00 0.00 44.70 2.73
1706 1848 5.099484 CCAACTTTGGGTTTAACGAGTAC 57.901 43.478 0.00 0.00 44.70 2.73
1773 1924 3.946308 TCGTACGCAGTCAGAGAATAG 57.054 47.619 11.24 0.00 43.93 1.73
1874 2025 9.147732 GGGATGACCTCCTTTTCAAAAATATAT 57.852 33.333 0.00 0.00 44.28 0.86
1875 2026 8.533569 GGGATGACCTCCTTTTCAAAAATATA 57.466 34.615 0.00 0.00 44.28 0.86
1876 2027 7.423844 GGGATGACCTCCTTTTCAAAAATAT 57.576 36.000 0.00 0.00 44.28 1.28
1877 2028 6.850752 GGGATGACCTCCTTTTCAAAAATA 57.149 37.500 0.00 0.00 44.28 1.40
1878 2029 5.745312 GGGATGACCTCCTTTTCAAAAAT 57.255 39.130 0.00 0.00 44.28 1.82
1892 2043 2.444895 AGAGCCCGAGGGATGACC 60.445 66.667 13.28 0.00 37.50 4.02
1893 2044 2.818132 CAGAGCCCGAGGGATGAC 59.182 66.667 13.28 0.00 37.50 3.06
1894 2045 3.157252 GCAGAGCCCGAGGGATGA 61.157 66.667 13.28 0.00 37.50 2.92
1895 2046 2.728443 GATGCAGAGCCCGAGGGATG 62.728 65.000 13.28 8.11 37.50 3.51
1896 2047 2.447379 ATGCAGAGCCCGAGGGAT 60.447 61.111 13.28 5.18 37.50 3.85
1897 2048 3.157252 GATGCAGAGCCCGAGGGA 61.157 66.667 13.28 0.00 37.50 4.20
1898 2049 4.598894 CGATGCAGAGCCCGAGGG 62.599 72.222 3.22 3.22 38.57 4.30
1899 2050 4.598894 CCGATGCAGAGCCCGAGG 62.599 72.222 0.00 0.00 0.00 4.63
1900 2051 2.578163 TTTCCGATGCAGAGCCCGAG 62.578 60.000 0.00 0.00 0.00 4.63
1901 2052 2.578163 CTTTCCGATGCAGAGCCCGA 62.578 60.000 0.00 0.00 0.00 5.14
1902 2053 2.125147 TTTCCGATGCAGAGCCCG 60.125 61.111 0.00 0.00 0.00 6.13
1903 2054 0.179034 ATCTTTCCGATGCAGAGCCC 60.179 55.000 0.00 0.00 0.00 5.19
1904 2055 0.942962 CATCTTTCCGATGCAGAGCC 59.057 55.000 0.00 0.00 42.75 4.70
1912 2063 0.179048 TCCGCATGCATCTTTCCGAT 60.179 50.000 19.57 0.00 0.00 4.18
1913 2064 1.089481 GTCCGCATGCATCTTTCCGA 61.089 55.000 19.57 0.00 0.00 4.55
1914 2065 1.353103 GTCCGCATGCATCTTTCCG 59.647 57.895 19.57 0.00 0.00 4.30
1915 2066 0.099436 GTGTCCGCATGCATCTTTCC 59.901 55.000 19.57 0.00 0.00 3.13
1916 2067 1.089920 AGTGTCCGCATGCATCTTTC 58.910 50.000 19.57 3.18 0.00 2.62
1917 2068 1.538047 AAGTGTCCGCATGCATCTTT 58.462 45.000 19.57 0.94 0.00 2.52
1918 2069 1.538047 AAAGTGTCCGCATGCATCTT 58.462 45.000 19.57 10.65 0.00 2.40
1919 2070 2.401583 TAAAGTGTCCGCATGCATCT 57.598 45.000 19.57 4.97 0.00 2.90
1920 2071 3.698029 AATAAAGTGTCCGCATGCATC 57.302 42.857 19.57 7.62 0.00 3.91
1921 2072 4.450976 TCTAATAAAGTGTCCGCATGCAT 58.549 39.130 19.57 0.00 0.00 3.96
1922 2073 3.867857 TCTAATAAAGTGTCCGCATGCA 58.132 40.909 19.57 0.00 0.00 3.96
1923 2074 3.303395 GCTCTAATAAAGTGTCCGCATGC 60.303 47.826 7.91 7.91 0.00 4.06
1924 2075 3.871006 TGCTCTAATAAAGTGTCCGCATG 59.129 43.478 0.00 0.00 0.00 4.06
1925 2076 4.137116 TGCTCTAATAAAGTGTCCGCAT 57.863 40.909 0.00 0.00 0.00 4.73
1926 2077 3.603158 TGCTCTAATAAAGTGTCCGCA 57.397 42.857 0.00 0.00 0.00 5.69
1927 2078 4.630069 TCTTTGCTCTAATAAAGTGTCCGC 59.370 41.667 0.00 0.00 35.82 5.54
1928 2079 6.535150 TCATCTTTGCTCTAATAAAGTGTCCG 59.465 38.462 0.00 0.00 35.82 4.79
1929 2080 7.849804 TCATCTTTGCTCTAATAAAGTGTCC 57.150 36.000 0.00 0.00 35.82 4.02
2029 2180 2.645567 CGCAGCCGATCCGACTAT 59.354 61.111 0.00 0.00 36.29 2.12
2048 2199 0.833949 CCTCCACTTCTTAGAGGGGC 59.166 60.000 0.00 0.00 42.98 5.80
2073 2224 1.004918 ACAACGGCACTCTGCTACC 60.005 57.895 0.00 0.00 44.28 3.18
2083 2234 1.885388 CGGACAAGACACAACGGCA 60.885 57.895 0.00 0.00 0.00 5.69
2086 2237 2.544359 CGCGGACAAGACACAACG 59.456 61.111 0.00 0.00 0.00 4.10
2251 2430 7.985634 TTCACAGTGAACATTTCTAAAAAGC 57.014 32.000 12.24 0.00 30.26 3.51
3243 3460 3.125316 TGTCGTTAAAGAGGAAACCACG 58.875 45.455 0.00 0.00 0.00 4.94
3261 3478 5.779529 AATAAATGACCATGATGGCTGTC 57.220 39.130 12.25 2.26 42.67 3.51
3293 3510 7.013846 GCTCCATAGACATCTTGAGTAGTAGTT 59.986 40.741 0.00 0.00 0.00 2.24
3329 3546 1.545136 TGCAATGCATGGTGTAAGGTG 59.455 47.619 2.72 0.00 31.71 4.00
3385 3649 5.998363 AGTTCTCTAGAAAAATGCGACCTTT 59.002 36.000 0.00 0.00 35.58 3.11
3388 3652 5.864628 AAGTTCTCTAGAAAAATGCGACC 57.135 39.130 0.00 0.00 35.58 4.79
3466 3754 9.678941 GCTTAGTAAAGAGTTGCATAACTTTTT 57.321 29.630 10.76 10.76 46.79 1.94
3487 5182 7.598759 TTCCTTAGGAGTACTAATGGCTTAG 57.401 40.000 0.00 3.24 40.71 2.18
3538 5233 5.331902 GTGTTATGACAACATGTATGCCAC 58.668 41.667 0.00 0.00 37.57 5.01
3598 5293 5.361285 ACCACAACTCATCTATCAGGTACTC 59.639 44.000 0.00 0.00 34.60 2.59
3610 5305 1.949525 ACTTGCACACCACAACTCATC 59.050 47.619 0.00 0.00 0.00 2.92
3629 5324 7.617533 AAACACAAAAACGACATAGCATAAC 57.382 32.000 0.00 0.00 0.00 1.89
3632 5327 6.016610 ACCTAAACACAAAAACGACATAGCAT 60.017 34.615 0.00 0.00 0.00 3.79
3635 5330 8.080083 AGTACCTAAACACAAAAACGACATAG 57.920 34.615 0.00 0.00 0.00 2.23
3641 5336 4.318974 CCGGAGTACCTAAACACAAAAACG 60.319 45.833 0.00 0.00 0.00 3.60
3650 5345 1.338389 TGCTTGCCGGAGTACCTAAAC 60.338 52.381 5.05 0.00 0.00 2.01
3663 5358 5.239525 CCACTTTCCTATAACTATGCTTGCC 59.760 44.000 0.00 0.00 0.00 4.52
3772 5469 9.305925 GGATTTATGTCCAATTGAGTTTGATTC 57.694 33.333 7.12 0.00 38.20 2.52
3800 5498 7.229907 TGTCGTGCCTACTAAGTCATATATGAA 59.770 37.037 16.97 1.33 38.75 2.57
3828 5527 7.364200 ACATTGAAATGAAAACAAATGCATGG 58.636 30.769 9.94 0.00 39.67 3.66
3888 5587 9.533253 CACATCACCACTTAAAGAATTCTTTTT 57.467 29.630 32.37 16.43 43.07 1.94
3889 5588 8.695456 ACACATCACCACTTAAAGAATTCTTTT 58.305 29.630 32.37 16.38 43.07 2.27
3890 5589 8.237811 ACACATCACCACTTAAAGAATTCTTT 57.762 30.769 30.61 30.61 46.78 2.52
3891 5590 7.823745 ACACATCACCACTTAAAGAATTCTT 57.176 32.000 15.11 15.11 37.91 2.52
3892 5591 7.823745 AACACATCACCACTTAAAGAATTCT 57.176 32.000 0.88 0.88 0.00 2.40
3893 5592 8.352942 AGAAACACATCACCACTTAAAGAATTC 58.647 33.333 0.00 0.00 0.00 2.17
3894 5593 8.237811 AGAAACACATCACCACTTAAAGAATT 57.762 30.769 0.00 0.00 0.00 2.17
3895 5594 7.823745 AGAAACACATCACCACTTAAAGAAT 57.176 32.000 0.00 0.00 0.00 2.40
3896 5595 7.990886 ACTAGAAACACATCACCACTTAAAGAA 59.009 33.333 0.00 0.00 0.00 2.52
3897 5596 7.506114 ACTAGAAACACATCACCACTTAAAGA 58.494 34.615 0.00 0.00 0.00 2.52
3898 5597 7.730364 ACTAGAAACACATCACCACTTAAAG 57.270 36.000 0.00 0.00 0.00 1.85
3899 5598 9.787435 AATACTAGAAACACATCACCACTTAAA 57.213 29.630 0.00 0.00 0.00 1.52
3900 5599 9.431887 GAATACTAGAAACACATCACCACTTAA 57.568 33.333 0.00 0.00 0.00 1.85
3901 5600 8.590204 TGAATACTAGAAACACATCACCACTTA 58.410 33.333 0.00 0.00 0.00 2.24
3902 5601 7.450074 TGAATACTAGAAACACATCACCACTT 58.550 34.615 0.00 0.00 0.00 3.16
3995 5695 5.751509 TGGACTTGAATTCCGTATACATTCG 59.248 40.000 2.27 0.00 35.70 3.34
4004 5704 3.417069 TGACATGGACTTGAATTCCGT 57.583 42.857 2.27 0.00 35.70 4.69
4029 5729 2.811431 TGTTAGACTTCGGGCACATTTG 59.189 45.455 0.00 0.00 0.00 2.32
4051 5751 4.260985 TCCATGAGTAAACATCAATGCGT 58.739 39.130 0.00 0.00 0.00 5.24
4103 5803 4.037923 ACGCTTCAAGTTTCAACCATGATT 59.962 37.500 0.00 0.00 34.96 2.57
4137 5837 3.701542 TGTGCAAAACATGTACCCAAGAA 59.298 39.130 0.00 0.00 43.29 2.52
4204 5905 6.948886 ACAACACAACACCATACCCATATTAA 59.051 34.615 0.00 0.00 0.00 1.40
4322 6023 1.643868 TATTGGCAGCAAGGAACGCG 61.644 55.000 3.53 3.53 0.00 6.01
4355 6056 2.501723 GACCTTCACAGCCTTAGGATCA 59.498 50.000 0.69 0.00 0.00 2.92
4471 6172 3.629398 AGTGACTGCTTTTGTGAAGAAGG 59.371 43.478 0.00 0.00 0.00 3.46
4497 6198 8.365060 TGACAATAATTTGATGGGATCTTGTT 57.635 30.769 0.00 0.00 36.64 2.83
4521 6222 1.955778 TGGCACTTCCTGAACAACATG 59.044 47.619 0.00 0.00 35.26 3.21
4594 6327 3.551846 ACATTTCGACCCAAGTTCAAGT 58.448 40.909 0.00 0.00 0.00 3.16
4663 6396 3.652057 AACATGACAATACCCCTGAGG 57.348 47.619 0.00 0.00 43.78 3.86
4712 6447 7.389330 CCGCACATGGGTTATATAATTAGTTCA 59.611 37.037 0.00 0.00 0.00 3.18
4727 6462 5.957771 ATCTATATAATCCGCACATGGGT 57.042 39.130 0.00 0.00 0.00 4.51
4907 6648 7.022384 GCAGTCGGAAGATATATGTAGTGTAC 58.978 42.308 0.00 0.00 45.19 2.90
5026 6773 5.827797 TGGAAGTGCTTTGTGTTTAAGATCT 59.172 36.000 0.00 0.00 0.00 2.75
5069 6816 1.345741 CGTGCCACCCTATCATCATCT 59.654 52.381 0.00 0.00 0.00 2.90
5105 6852 5.584551 AGGTCTTTTGGTTTACTGATCCT 57.415 39.130 0.00 0.00 0.00 3.24
5138 6885 6.173339 GTGGACAGATGAAGGTGAAATTCTA 58.827 40.000 0.00 0.00 0.00 2.10
5155 6902 4.760530 TCCATAAGAAGGATGTGGACAG 57.239 45.455 0.00 0.00 34.23 3.51
5241 7005 6.660094 GGTTTAACAGTATGGTGGGTTCAATA 59.340 38.462 0.00 0.00 35.42 1.90
5280 7044 6.072008 CGAATATCTCCTCAGTCATGATGTCT 60.072 42.308 0.00 0.00 34.12 3.41
5381 7253 3.511146 CCTGAAAGCCCACATTTACATGT 59.489 43.478 2.69 2.69 45.18 3.21
5388 7260 4.112634 TCTTTACCTGAAAGCCCACATT 57.887 40.909 0.00 0.00 43.78 2.71
5446 7321 4.660789 GCATAGATTGCCAATGGTTTCT 57.339 40.909 0.00 3.73 46.15 2.52
5519 7394 2.858344 GTCGTTGAATGTGATACTCCCG 59.142 50.000 0.00 0.00 0.00 5.14
5648 7523 8.257306 TGCAACAACATAGTAGTCATGATTAGA 58.743 33.333 0.00 0.00 0.00 2.10
5684 7559 4.814294 CCGAACGGGAGGCCTTCG 62.814 72.222 22.48 22.48 38.47 3.79
5801 7676 2.172505 TGGCGGGTATCTGAACATGAAT 59.827 45.455 0.00 0.00 0.00 2.57
5867 7742 7.674772 AGTCCAAGGAGTAGAAGTATGTAGTTT 59.325 37.037 0.00 0.00 0.00 2.66
5901 7776 5.707298 GGTTGTTCTTTCATCATCTCCTCAA 59.293 40.000 0.00 0.00 0.00 3.02
5915 7790 3.135895 TCTCTTTCTCCCGGTTGTTCTTT 59.864 43.478 0.00 0.00 0.00 2.52
5926 7802 0.252742 TCCCCTGGTCTCTTTCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
5945 7821 3.707793 CGTAGCTTCTCTCGGCTATTTT 58.292 45.455 0.00 0.00 42.01 1.82
5970 7846 5.047164 TGCTGTCCATATGCTTTTGTTCATT 60.047 36.000 0.00 0.00 0.00 2.57
5991 7867 3.058501 GTGTAGCATTTACGTGGTTTGCT 60.059 43.478 17.25 17.25 45.10 3.91
6001 7877 3.428870 CGATCGGATGGTGTAGCATTTAC 59.571 47.826 7.38 0.00 0.00 2.01
6012 7888 4.766375 ACACTTATTTTCGATCGGATGGT 58.234 39.130 16.41 8.05 0.00 3.55
6013 7889 4.085055 CGACACTTATTTTCGATCGGATGG 60.085 45.833 16.41 0.00 34.62 3.51
6014 7890 4.606232 GCGACACTTATTTTCGATCGGATG 60.606 45.833 16.41 2.83 34.62 3.51
6015 7891 3.489785 GCGACACTTATTTTCGATCGGAT 59.510 43.478 16.41 9.71 34.62 4.18
6016 7892 2.855963 GCGACACTTATTTTCGATCGGA 59.144 45.455 16.41 2.60 34.62 4.55
6018 7894 2.346376 CCGCGACACTTATTTTCGATCG 60.346 50.000 8.23 9.36 34.62 3.69
6019 7895 2.601763 ACCGCGACACTTATTTTCGATC 59.398 45.455 8.23 0.00 34.62 3.69
6020 7896 2.613691 ACCGCGACACTTATTTTCGAT 58.386 42.857 8.23 0.00 34.62 3.59
6021 7897 2.068837 ACCGCGACACTTATTTTCGA 57.931 45.000 8.23 0.00 34.62 3.71
6022 7898 2.867456 AACCGCGACACTTATTTTCG 57.133 45.000 8.23 0.00 35.82 3.46
6023 7899 4.529446 TCAAAACCGCGACACTTATTTTC 58.471 39.130 8.23 0.00 0.00 2.29
6024 7900 4.555348 TCAAAACCGCGACACTTATTTT 57.445 36.364 8.23 0.00 0.00 1.82
6025 7901 4.555348 TTCAAAACCGCGACACTTATTT 57.445 36.364 8.23 0.00 0.00 1.40
6026 7902 4.555348 TTTCAAAACCGCGACACTTATT 57.445 36.364 8.23 0.00 0.00 1.40
6027 7903 4.759516 ATTTCAAAACCGCGACACTTAT 57.240 36.364 8.23 0.00 0.00 1.73
6028 7904 5.334260 CCTTATTTCAAAACCGCGACACTTA 60.334 40.000 8.23 0.00 0.00 2.24
6029 7905 4.533222 CTTATTTCAAAACCGCGACACTT 58.467 39.130 8.23 0.00 0.00 3.16
6030 7906 3.058501 CCTTATTTCAAAACCGCGACACT 60.059 43.478 8.23 0.00 0.00 3.55
6031 7907 3.231160 CCTTATTTCAAAACCGCGACAC 58.769 45.455 8.23 0.00 0.00 3.67
6032 7908 2.879646 ACCTTATTTCAAAACCGCGACA 59.120 40.909 8.23 0.00 0.00 4.35
6033 7909 3.547649 ACCTTATTTCAAAACCGCGAC 57.452 42.857 8.23 0.00 0.00 5.19
6034 7910 4.756135 ACTAACCTTATTTCAAAACCGCGA 59.244 37.500 8.23 0.00 0.00 5.87
6035 7911 5.038247 ACTAACCTTATTTCAAAACCGCG 57.962 39.130 0.00 0.00 0.00 6.46
6036 7912 6.440436 TGAACTAACCTTATTTCAAAACCGC 58.560 36.000 0.00 0.00 31.88 5.68
6037 7913 8.277270 GTTGAACTAACCTTATTTCAAAACCG 57.723 34.615 10.49 0.00 41.11 4.44
6052 7928 7.803659 GCAGATTTGAACTAAGGTTGAACTAAC 59.196 37.037 0.00 0.00 35.58 2.34
6053 7929 7.307751 CGCAGATTTGAACTAAGGTTGAACTAA 60.308 37.037 0.00 0.00 35.58 2.24
6054 7930 6.147164 CGCAGATTTGAACTAAGGTTGAACTA 59.853 38.462 0.00 0.00 35.58 2.24
6055 7931 5.049405 CGCAGATTTGAACTAAGGTTGAACT 60.049 40.000 0.00 0.00 35.58 3.01
6056 7932 5.049680 TCGCAGATTTGAACTAAGGTTGAAC 60.050 40.000 0.00 0.00 35.58 3.18
6057 7933 5.049680 GTCGCAGATTTGAACTAAGGTTGAA 60.050 40.000 0.00 0.00 40.67 2.69
6058 7934 4.451096 GTCGCAGATTTGAACTAAGGTTGA 59.549 41.667 0.00 0.00 40.67 3.18
6059 7935 4.213270 TGTCGCAGATTTGAACTAAGGTTG 59.787 41.667 0.00 0.00 40.67 3.77
6060 7936 4.213482 GTGTCGCAGATTTGAACTAAGGTT 59.787 41.667 0.00 0.00 40.67 3.50
6061 7937 3.746492 GTGTCGCAGATTTGAACTAAGGT 59.254 43.478 0.00 0.00 40.67 3.50
6062 7938 3.997021 AGTGTCGCAGATTTGAACTAAGG 59.003 43.478 0.00 0.00 40.67 2.69
6063 7939 5.597813 AAGTGTCGCAGATTTGAACTAAG 57.402 39.130 0.00 0.00 40.67 2.18
6064 7940 7.667043 AATAAGTGTCGCAGATTTGAACTAA 57.333 32.000 0.00 0.00 40.67 2.24
6065 7941 8.817100 CATAATAAGTGTCGCAGATTTGAACTA 58.183 33.333 0.00 0.00 40.67 2.24
6066 7942 7.201644 CCATAATAAGTGTCGCAGATTTGAACT 60.202 37.037 0.00 0.00 40.67 3.01
6067 7943 6.907212 CCATAATAAGTGTCGCAGATTTGAAC 59.093 38.462 0.00 0.00 40.67 3.18
6068 7944 6.821160 TCCATAATAAGTGTCGCAGATTTGAA 59.179 34.615 0.00 0.00 40.67 2.69
6069 7945 6.345298 TCCATAATAAGTGTCGCAGATTTGA 58.655 36.000 0.00 0.00 40.67 2.69
6070 7946 6.603237 TCCATAATAAGTGTCGCAGATTTG 57.397 37.500 0.00 0.00 40.67 2.32
6071 7947 6.146184 CGATCCATAATAAGTGTCGCAGATTT 59.854 38.462 0.00 0.00 40.67 2.17
6072 7948 5.635280 CGATCCATAATAAGTGTCGCAGATT 59.365 40.000 0.00 0.00 40.67 2.40
6073 7949 5.164233 CGATCCATAATAAGTGTCGCAGAT 58.836 41.667 0.00 0.00 40.67 2.90
6074 7950 4.546570 CGATCCATAATAAGTGTCGCAGA 58.453 43.478 0.00 0.00 0.00 4.26
6075 7951 3.675225 CCGATCCATAATAAGTGTCGCAG 59.325 47.826 0.00 0.00 0.00 5.18
6076 7952 3.554129 CCCGATCCATAATAAGTGTCGCA 60.554 47.826 0.00 0.00 0.00 5.10
6077 7953 2.993899 CCCGATCCATAATAAGTGTCGC 59.006 50.000 0.00 0.00 0.00 5.19
6078 7954 3.585862 CCCCGATCCATAATAAGTGTCG 58.414 50.000 0.00 0.00 0.00 4.35
6079 7955 3.939066 CCCCCGATCCATAATAAGTGTC 58.061 50.000 0.00 0.00 0.00 3.67
6098 7974 5.756833 CACGAACAAAAGTATATACTCCCCC 59.243 44.000 15.72 3.57 34.99 5.40
6099 7975 5.235831 GCACGAACAAAAGTATATACTCCCC 59.764 44.000 15.72 2.65 34.99 4.81
6100 7976 5.813672 TGCACGAACAAAAGTATATACTCCC 59.186 40.000 15.72 2.04 34.99 4.30
6101 7977 6.897259 TGCACGAACAAAAGTATATACTCC 57.103 37.500 15.72 1.74 34.99 3.85
6135 8013 4.644685 AGAAACAGGTTTGCACACTTACAT 59.355 37.500 2.52 0.00 32.11 2.29
6146 8024 4.662145 GACACTCAACAGAAACAGGTTTG 58.338 43.478 1.52 0.00 32.11 2.93
6149 8027 2.093658 ACGACACTCAACAGAAACAGGT 60.094 45.455 0.00 0.00 0.00 4.00
6151 8029 3.186909 TCACGACACTCAACAGAAACAG 58.813 45.455 0.00 0.00 0.00 3.16
6152 8030 3.239587 TCACGACACTCAACAGAAACA 57.760 42.857 0.00 0.00 0.00 2.83
6153 8031 4.318831 GGAATCACGACACTCAACAGAAAC 60.319 45.833 0.00 0.00 0.00 2.78
6168 8046 3.138304 TGTCAAACCTTGAGGAATCACG 58.862 45.455 3.59 0.00 41.01 4.35
6195 8077 5.994416 AGGGGTGTTATCCTGAATTGTAT 57.006 39.130 0.00 0.00 31.11 2.29
6199 8081 4.380791 ACCTAGGGGTGTTATCCTGAATT 58.619 43.478 14.81 0.00 45.43 2.17
6254 8136 8.669243 CCTTGCCTAATAAGAAGTTCTAGTTTG 58.331 37.037 5.65 5.43 0.00 2.93
6271 8153 2.949177 TCAAACTGAGCCTTGCCTAA 57.051 45.000 0.00 0.00 0.00 2.69
6274 8156 1.251251 ACATCAAACTGAGCCTTGCC 58.749 50.000 0.00 0.00 0.00 4.52
6276 8158 2.295349 AGCAACATCAAACTGAGCCTTG 59.705 45.455 0.00 0.00 0.00 3.61
6290 8172 9.062524 TCTTAACACAACATAGTTTAGCAACAT 57.937 29.630 0.00 0.00 35.05 2.71
6333 8246 3.592877 AGGGGTCGGGTAATCCTTAAAAA 59.407 43.478 0.00 0.00 0.00 1.94
6334 8247 3.054213 CAGGGGTCGGGTAATCCTTAAAA 60.054 47.826 0.00 0.00 0.00 1.52
6335 8248 2.506644 CAGGGGTCGGGTAATCCTTAAA 59.493 50.000 0.00 0.00 0.00 1.52
6336 8249 2.121129 CAGGGGTCGGGTAATCCTTAA 58.879 52.381 0.00 0.00 0.00 1.85
6337 8250 1.797320 CAGGGGTCGGGTAATCCTTA 58.203 55.000 0.00 0.00 0.00 2.69
6338 8251 1.632965 GCAGGGGTCGGGTAATCCTT 61.633 60.000 0.00 0.00 0.00 3.36
6339 8252 2.070650 GCAGGGGTCGGGTAATCCT 61.071 63.158 0.00 0.00 0.00 3.24
6340 8253 1.917336 TTGCAGGGGTCGGGTAATCC 61.917 60.000 0.00 0.00 0.00 3.01
6341 8254 0.746923 GTTGCAGGGGTCGGGTAATC 60.747 60.000 0.00 0.00 0.00 1.75
6342 8255 1.301954 GTTGCAGGGGTCGGGTAAT 59.698 57.895 0.00 0.00 0.00 1.89
6343 8256 1.493854 ATGTTGCAGGGGTCGGGTAA 61.494 55.000 0.00 0.00 0.00 2.85
6344 8257 1.493854 AATGTTGCAGGGGTCGGGTA 61.494 55.000 0.00 0.00 0.00 3.69
6345 8258 1.493854 TAATGTTGCAGGGGTCGGGT 61.494 55.000 0.00 0.00 0.00 5.28
6346 8259 1.029947 GTAATGTTGCAGGGGTCGGG 61.030 60.000 0.00 0.00 0.00 5.14
6347 8260 0.035439 AGTAATGTTGCAGGGGTCGG 60.035 55.000 0.00 0.00 0.00 4.79
6348 8261 1.821216 AAGTAATGTTGCAGGGGTCG 58.179 50.000 0.00 0.00 0.00 4.79
6349 8262 7.502561 AGATTATTAAGTAATGTTGCAGGGGTC 59.497 37.037 0.00 0.00 33.16 4.46
6350 8263 7.285401 CAGATTATTAAGTAATGTTGCAGGGGT 59.715 37.037 0.00 0.00 33.16 4.95
6351 8264 7.502226 TCAGATTATTAAGTAATGTTGCAGGGG 59.498 37.037 0.00 0.00 33.16 4.79
6352 8265 8.450578 TCAGATTATTAAGTAATGTTGCAGGG 57.549 34.615 0.00 0.00 33.16 4.45
6353 8266 9.888878 CATCAGATTATTAAGTAATGTTGCAGG 57.111 33.333 0.00 0.00 33.16 4.85
6371 8284 9.857656 ATATGGAGTATTGTTTCACATCAGATT 57.142 29.630 0.00 0.00 0.00 2.40
6374 8287 8.715998 GCTATATGGAGTATTGTTTCACATCAG 58.284 37.037 0.00 0.00 0.00 2.90
6381 8294 6.812160 CCGGTAGCTATATGGAGTATTGTTTC 59.188 42.308 0.00 0.00 0.00 2.78
6385 8298 6.525578 TTCCGGTAGCTATATGGAGTATTG 57.474 41.667 0.00 0.00 0.00 1.90
6415 8329 2.811431 CTGGTGGACGTTTTGCTAATCA 59.189 45.455 0.00 0.00 0.00 2.57
6416 8330 3.071479 TCTGGTGGACGTTTTGCTAATC 58.929 45.455 0.00 0.00 0.00 1.75
6417 8331 3.134574 TCTGGTGGACGTTTTGCTAAT 57.865 42.857 0.00 0.00 0.00 1.73
6419 8333 2.158871 AGTTCTGGTGGACGTTTTGCTA 60.159 45.455 0.00 0.00 0.00 3.49
6420 8334 1.021968 GTTCTGGTGGACGTTTTGCT 58.978 50.000 0.00 0.00 0.00 3.91
6421 8335 1.021968 AGTTCTGGTGGACGTTTTGC 58.978 50.000 0.00 0.00 0.00 3.68
6422 8336 4.062293 TCATAGTTCTGGTGGACGTTTTG 58.938 43.478 0.00 0.00 0.00 2.44
6445 8359 2.838813 TCGGTATTGTGGTGGTGGAATA 59.161 45.455 0.00 0.00 0.00 1.75
6448 8362 1.065782 CATCGGTATTGTGGTGGTGGA 60.066 52.381 0.00 0.00 0.00 4.02
6599 9029 5.647658 TGCATTATTGATCGTTCTTTGGTCT 59.352 36.000 0.00 0.00 0.00 3.85
6603 9033 5.228635 GTGCTGCATTATTGATCGTTCTTTG 59.771 40.000 5.27 0.00 0.00 2.77
6604 9034 5.335127 GTGCTGCATTATTGATCGTTCTTT 58.665 37.500 5.27 0.00 0.00 2.52
6642 9072 7.311408 AGTCTCGTAGTATTGGTCAGTTTAAC 58.689 38.462 0.00 0.00 0.00 2.01
6654 9095 3.317430 CGGGCCTTTAGTCTCGTAGTATT 59.683 47.826 0.84 0.00 0.00 1.89
6655 9096 2.883386 CGGGCCTTTAGTCTCGTAGTAT 59.117 50.000 0.84 0.00 0.00 2.12
6656 9097 2.292267 CGGGCCTTTAGTCTCGTAGTA 58.708 52.381 0.84 0.00 0.00 1.82
6657 9098 1.101331 CGGGCCTTTAGTCTCGTAGT 58.899 55.000 0.84 0.00 0.00 2.73
6658 9099 1.101331 ACGGGCCTTTAGTCTCGTAG 58.899 55.000 0.84 0.00 0.00 3.51
6659 9100 1.474077 GAACGGGCCTTTAGTCTCGTA 59.526 52.381 0.84 0.00 0.00 3.43
6660 9101 0.245813 GAACGGGCCTTTAGTCTCGT 59.754 55.000 0.84 0.00 0.00 4.18
6661 9102 0.801067 CGAACGGGCCTTTAGTCTCG 60.801 60.000 0.84 0.00 0.00 4.04
6662 9103 0.459759 CCGAACGGGCCTTTAGTCTC 60.460 60.000 0.84 0.00 0.00 3.36
6663 9104 0.901580 TCCGAACGGGCCTTTAGTCT 60.902 55.000 13.29 0.00 34.94 3.24
6664 9105 0.738762 GTCCGAACGGGCCTTTAGTC 60.739 60.000 13.29 0.00 32.85 2.59
6665 9106 1.190178 AGTCCGAACGGGCCTTTAGT 61.190 55.000 14.23 0.00 41.70 2.24
6666 9107 0.459759 GAGTCCGAACGGGCCTTTAG 60.460 60.000 14.23 0.00 41.70 1.85
6667 9108 1.593265 GAGTCCGAACGGGCCTTTA 59.407 57.895 14.23 0.00 41.70 1.85
6668 9109 2.346365 GAGTCCGAACGGGCCTTT 59.654 61.111 14.23 0.00 41.70 3.11
6669 9110 3.703127 GGAGTCCGAACGGGCCTT 61.703 66.667 14.23 0.00 41.70 4.35
6672 9113 4.144703 GAGGGAGTCCGAACGGGC 62.145 72.222 9.95 9.95 40.91 6.13
6673 9114 3.459063 GGAGGGAGTCCGAACGGG 61.459 72.222 13.29 0.00 34.84 5.28
6681 9122 0.616111 TTGGAGAGCAGGAGGGAGTC 60.616 60.000 0.00 0.00 0.00 3.36
6682 9123 0.907230 GTTGGAGAGCAGGAGGGAGT 60.907 60.000 0.00 0.00 0.00 3.85
6683 9124 0.617249 AGTTGGAGAGCAGGAGGGAG 60.617 60.000 0.00 0.00 0.00 4.30
6684 9125 0.616111 GAGTTGGAGAGCAGGAGGGA 60.616 60.000 0.00 0.00 0.00 4.20
6685 9126 1.621672 GGAGTTGGAGAGCAGGAGGG 61.622 65.000 0.00 0.00 0.00 4.30
6686 9127 1.904032 GGAGTTGGAGAGCAGGAGG 59.096 63.158 0.00 0.00 0.00 4.30
6687 9128 1.515020 CGGAGTTGGAGAGCAGGAG 59.485 63.158 0.00 0.00 0.00 3.69
6688 9129 2.650116 GCGGAGTTGGAGAGCAGGA 61.650 63.158 0.00 0.00 0.00 3.86
6689 9130 2.125350 GCGGAGTTGGAGAGCAGG 60.125 66.667 0.00 0.00 0.00 4.85
6690 9131 1.153667 GAGCGGAGTTGGAGAGCAG 60.154 63.158 0.00 0.00 0.00 4.24
6691 9132 2.650116 GGAGCGGAGTTGGAGAGCA 61.650 63.158 0.00 0.00 0.00 4.26
6692 9133 2.185608 GGAGCGGAGTTGGAGAGC 59.814 66.667 0.00 0.00 0.00 4.09
6693 9134 2.492090 CGGAGCGGAGTTGGAGAG 59.508 66.667 0.00 0.00 0.00 3.20
6709 9150 3.869272 GCATGTTGCTCCGCTCCG 61.869 66.667 0.00 0.00 40.96 4.63
6710 9151 2.747460 TGCATGTTGCTCCGCTCC 60.747 61.111 0.75 0.00 45.31 4.70
6711 9152 2.037136 ACTGCATGTTGCTCCGCTC 61.037 57.895 0.75 0.00 45.31 5.03
6712 9153 2.033141 ACTGCATGTTGCTCCGCT 59.967 55.556 0.75 0.00 45.31 5.52
6713 9154 2.177531 CACTGCATGTTGCTCCGC 59.822 61.111 0.75 0.00 45.31 5.54
6714 9155 3.659334 ACACTGCATGTTGCTCCG 58.341 55.556 0.75 0.00 45.31 4.63
6721 9162 4.082571 GCTCCTCAAATTAACACTGCATGT 60.083 41.667 0.00 0.00 46.42 3.21
6722 9163 4.157289 AGCTCCTCAAATTAACACTGCATG 59.843 41.667 0.00 0.00 0.00 4.06
6723 9164 4.157289 CAGCTCCTCAAATTAACACTGCAT 59.843 41.667 0.00 0.00 0.00 3.96
6724 9165 3.503363 CAGCTCCTCAAATTAACACTGCA 59.497 43.478 0.00 0.00 0.00 4.41
6725 9166 3.671702 GCAGCTCCTCAAATTAACACTGC 60.672 47.826 0.00 0.00 40.89 4.40
6726 9167 3.755378 AGCAGCTCCTCAAATTAACACTG 59.245 43.478 0.00 0.00 0.00 3.66
6727 9168 4.026356 AGCAGCTCCTCAAATTAACACT 57.974 40.909 0.00 0.00 0.00 3.55
6728 9169 5.880054 TTAGCAGCTCCTCAAATTAACAC 57.120 39.130 0.00 0.00 0.00 3.32
6729 9170 6.257849 CGTATTAGCAGCTCCTCAAATTAACA 59.742 38.462 0.00 0.00 0.00 2.41
6730 9171 6.479001 TCGTATTAGCAGCTCCTCAAATTAAC 59.521 38.462 0.00 0.00 0.00 2.01
6731 9172 6.578944 TCGTATTAGCAGCTCCTCAAATTAA 58.421 36.000 0.00 0.00 0.00 1.40
6732 9173 6.156748 TCGTATTAGCAGCTCCTCAAATTA 57.843 37.500 0.00 0.00 0.00 1.40
6733 9174 5.023533 TCGTATTAGCAGCTCCTCAAATT 57.976 39.130 0.00 0.00 0.00 1.82
6734 9175 4.672587 TCGTATTAGCAGCTCCTCAAAT 57.327 40.909 0.00 0.00 0.00 2.32
6735 9176 4.371786 CATCGTATTAGCAGCTCCTCAAA 58.628 43.478 0.00 0.00 0.00 2.69
6736 9177 3.800261 GCATCGTATTAGCAGCTCCTCAA 60.800 47.826 0.00 0.00 0.00 3.02
6737 9178 2.288457 GCATCGTATTAGCAGCTCCTCA 60.288 50.000 0.00 0.00 0.00 3.86
6738 9179 2.029470 AGCATCGTATTAGCAGCTCCTC 60.029 50.000 0.00 0.00 0.00 3.71
6739 9180 1.967066 AGCATCGTATTAGCAGCTCCT 59.033 47.619 0.00 0.00 0.00 3.69
6740 9181 2.333014 GAGCATCGTATTAGCAGCTCC 58.667 52.381 0.00 0.00 41.83 4.70
6741 9182 2.288457 TGGAGCATCGTATTAGCAGCTC 60.288 50.000 0.00 0.00 45.65 4.09
6742 9183 1.688735 TGGAGCATCGTATTAGCAGCT 59.311 47.619 0.00 0.00 34.37 4.24
6743 9184 1.795286 GTGGAGCATCGTATTAGCAGC 59.205 52.381 0.00 0.00 34.37 5.25
6744 9185 2.408050 GGTGGAGCATCGTATTAGCAG 58.592 52.381 0.00 0.00 34.37 4.24
6745 9186 1.070134 GGGTGGAGCATCGTATTAGCA 59.930 52.381 0.00 0.00 34.37 3.49
6746 9187 1.797025 GGGTGGAGCATCGTATTAGC 58.203 55.000 0.00 0.00 34.37 3.09
6747 9188 1.935300 GCGGGTGGAGCATCGTATTAG 60.935 57.143 0.00 0.00 34.37 1.73
6748 9189 0.032952 GCGGGTGGAGCATCGTATTA 59.967 55.000 0.00 0.00 34.37 0.98
6749 9190 1.227556 GCGGGTGGAGCATCGTATT 60.228 57.895 0.00 0.00 34.37 1.89
6750 9191 2.088674 GAGCGGGTGGAGCATCGTAT 62.089 60.000 0.00 0.00 37.01 3.06
6751 9192 2.758327 AGCGGGTGGAGCATCGTA 60.758 61.111 0.00 0.00 37.01 3.43
6752 9193 4.148825 GAGCGGGTGGAGCATCGT 62.149 66.667 0.00 0.00 37.01 3.73
6753 9194 4.899239 GGAGCGGGTGGAGCATCG 62.899 72.222 0.00 0.00 37.01 3.84
6754 9195 4.899239 CGGAGCGGGTGGAGCATC 62.899 72.222 0.00 0.00 37.01 3.91
6773 9214 2.037367 CCACTCCTCCACTCGGGA 59.963 66.667 0.00 0.00 45.89 5.14
6774 9215 2.037367 TCCACTCCTCCACTCGGG 59.963 66.667 0.00 0.00 38.37 5.14
6775 9216 2.055042 CCTCCACTCCTCCACTCGG 61.055 68.421 0.00 0.00 0.00 4.63
6776 9217 2.055042 CCCTCCACTCCTCCACTCG 61.055 68.421 0.00 0.00 0.00 4.18
6777 9218 2.363172 GCCCTCCACTCCTCCACTC 61.363 68.421 0.00 0.00 0.00 3.51
6778 9219 1.519326 TAGCCCTCCACTCCTCCACT 61.519 60.000 0.00 0.00 0.00 4.00
6779 9220 1.001760 TAGCCCTCCACTCCTCCAC 59.998 63.158 0.00 0.00 0.00 4.02
6780 9221 1.001760 GTAGCCCTCCACTCCTCCA 59.998 63.158 0.00 0.00 0.00 3.86
6781 9222 1.762858 GGTAGCCCTCCACTCCTCC 60.763 68.421 0.00 0.00 0.00 4.30
6782 9223 2.128507 CGGTAGCCCTCCACTCCTC 61.129 68.421 0.00 0.00 0.00 3.71
6783 9224 2.042843 CGGTAGCCCTCCACTCCT 60.043 66.667 0.00 0.00 0.00 3.69
6784 9225 1.684734 TTCGGTAGCCCTCCACTCC 60.685 63.158 0.00 0.00 0.00 3.85
6785 9226 1.255667 TGTTCGGTAGCCCTCCACTC 61.256 60.000 0.00 0.00 0.00 3.51
6786 9227 1.229082 TGTTCGGTAGCCCTCCACT 60.229 57.895 0.00 0.00 0.00 4.00
6787 9228 1.079336 GTGTTCGGTAGCCCTCCAC 60.079 63.158 0.00 0.00 0.00 4.02
6788 9229 1.534476 TGTGTTCGGTAGCCCTCCA 60.534 57.895 0.00 0.00 0.00 3.86
6789 9230 1.218316 CTGTGTTCGGTAGCCCTCC 59.782 63.158 0.00 0.00 0.00 4.30
6790 9231 1.448013 GCTGTGTTCGGTAGCCCTC 60.448 63.158 0.00 0.00 0.00 4.30
6791 9232 2.663196 GCTGTGTTCGGTAGCCCT 59.337 61.111 0.00 0.00 0.00 5.19
6794 9235 1.203994 TCTTAGGCTGTGTTCGGTAGC 59.796 52.381 0.00 0.00 36.74 3.58
6795 9236 3.251571 GTTCTTAGGCTGTGTTCGGTAG 58.748 50.000 0.00 0.00 0.00 3.18
6796 9237 2.352030 CGTTCTTAGGCTGTGTTCGGTA 60.352 50.000 0.00 0.00 0.00 4.02
6797 9238 1.604693 CGTTCTTAGGCTGTGTTCGGT 60.605 52.381 0.00 0.00 0.00 4.69
6798 9239 1.068474 CGTTCTTAGGCTGTGTTCGG 58.932 55.000 0.00 0.00 0.00 4.30
6799 9240 0.438830 GCGTTCTTAGGCTGTGTTCG 59.561 55.000 0.00 0.00 32.53 3.95
6800 9241 1.508632 TGCGTTCTTAGGCTGTGTTC 58.491 50.000 0.00 0.00 36.17 3.18
6801 9242 1.602377 GTTGCGTTCTTAGGCTGTGTT 59.398 47.619 0.00 0.00 36.17 3.32
6802 9243 1.226746 GTTGCGTTCTTAGGCTGTGT 58.773 50.000 0.00 0.00 36.17 3.72
6803 9244 0.517316 GGTTGCGTTCTTAGGCTGTG 59.483 55.000 0.00 0.00 36.17 3.66
6804 9245 0.949105 CGGTTGCGTTCTTAGGCTGT 60.949 55.000 0.00 0.00 36.17 4.40
6805 9246 0.669318 TCGGTTGCGTTCTTAGGCTG 60.669 55.000 0.00 0.00 36.17 4.85
6806 9247 0.249398 ATCGGTTGCGTTCTTAGGCT 59.751 50.000 0.00 0.00 36.17 4.58
6807 9248 0.651031 GATCGGTTGCGTTCTTAGGC 59.349 55.000 0.00 0.00 35.75 3.93
6808 9249 0.921347 CGATCGGTTGCGTTCTTAGG 59.079 55.000 7.38 0.00 0.00 2.69
6809 9250 1.904144 TCGATCGGTTGCGTTCTTAG 58.096 50.000 16.41 0.00 0.00 2.18
6810 9251 2.572191 ATCGATCGGTTGCGTTCTTA 57.428 45.000 16.41 0.00 0.00 2.10
6817 9258 0.667792 GGGAGCTATCGATCGGTTGC 60.668 60.000 24.33 24.33 0.00 4.17
6821 9262 2.232452 AGATTTGGGAGCTATCGATCGG 59.768 50.000 16.41 0.00 0.00 4.18
6822 9263 3.057245 TGAGATTTGGGAGCTATCGATCG 60.057 47.826 9.36 9.36 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.