Multiple sequence alignment - TraesCS6D01G218900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G218900 chr6D 100.000 4780 0 0 1 4780 308926130 308921351 0.000000e+00 8828.0
1 TraesCS6D01G218900 chr6D 78.489 1046 177 33 1630 2646 303063973 303064999 4.030000e-180 641.0
2 TraesCS6D01G218900 chr6A 89.667 1200 75 23 404 1577 445503082 445504258 0.000000e+00 1483.0
3 TraesCS6D01G218900 chr6A 90.062 1137 85 12 3164 4275 445506073 445507206 0.000000e+00 1448.0
4 TraesCS6D01G218900 chr6A 91.379 174 11 4 1 170 445502617 445502790 8.000000e-58 235.0
5 TraesCS6D01G218900 chr6A 94.355 124 7 0 4263 4386 445521379 445521502 1.760000e-44 191.0
6 TraesCS6D01G218900 chr6B 90.482 788 70 4 3166 3949 476176894 476176108 0.000000e+00 1035.0
7 TraesCS6D01G218900 chr6B 88.685 654 61 8 3949 4592 476176008 476175358 0.000000e+00 785.0
8 TraesCS6D01G218900 chr6B 86.587 671 48 14 799 1453 476192552 476191908 0.000000e+00 702.0
9 TraesCS6D01G218900 chr6B 86.869 297 22 7 465 757 476193137 476192854 2.780000e-82 316.0
10 TraesCS6D01G218900 chr6B 96.154 52 1 1 167 218 476338620 476338570 3.070000e-12 84.2
11 TraesCS6D01G218900 chr7A 80.835 1054 157 35 1623 2658 164820322 164821348 0.000000e+00 785.0
12 TraesCS6D01G218900 chr7A 81.339 702 111 18 1956 2649 138733946 138734635 1.940000e-153 553.0
13 TraesCS6D01G218900 chr7A 77.935 494 66 24 1621 2082 577828665 577829147 7.890000e-68 268.0
14 TraesCS6D01G218900 chr4B 81.070 1009 157 29 1625 2616 623427023 623428014 0.000000e+00 774.0
15 TraesCS6D01G218900 chr2D 79.147 1055 146 41 1618 2649 422095829 422096832 0.000000e+00 662.0
16 TraesCS6D01G218900 chr1D 78.538 1053 178 34 1620 2649 493735542 493734515 0.000000e+00 649.0
17 TraesCS6D01G218900 chr3D 78.703 1033 169 36 1650 2658 231133748 231132743 4.030000e-180 641.0
18 TraesCS6D01G218900 chr3B 78.302 1060 184 36 1628 2658 283586451 283585409 4.030000e-180 641.0
19 TraesCS6D01G218900 chr5B 80.516 775 126 22 1896 2658 13503256 13502495 5.370000e-159 571.0
20 TraesCS6D01G218900 chr1B 76.642 1066 156 45 1612 2645 317361666 317360662 1.990000e-138 503.0
21 TraesCS6D01G218900 chr1B 74.432 1013 167 53 1622 2590 17395712 17394748 7.610000e-93 351.0
22 TraesCS6D01G218900 chr1B 81.362 279 40 10 1619 1890 112353045 112353318 2.900000e-52 217.0
23 TraesCS6D01G218900 chr5D 75.229 1094 182 48 1621 2664 1520082 1519028 2.040000e-118 436.0
24 TraesCS6D01G218900 chr5D 79.377 514 76 24 1619 2114 268692170 268691669 7.670000e-88 335.0
25 TraesCS6D01G218900 chr5D 86.344 227 25 5 1624 1849 438102040 438101819 4.780000e-60 243.0
26 TraesCS6D01G218900 chr2A 78.337 457 69 16 1621 2053 740739830 740739380 7.890000e-68 268.0
27 TraesCS6D01G218900 chr5A 82.594 293 42 8 1621 1910 536216633 536216347 2.860000e-62 250.0
28 TraesCS6D01G218900 chr7B 74.564 287 61 11 1626 1908 23444279 23444001 1.090000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G218900 chr6D 308921351 308926130 4779 True 8828.000000 8828 100.000000 1 4780 1 chr6D.!!$R1 4779
1 TraesCS6D01G218900 chr6D 303063973 303064999 1026 False 641.000000 641 78.489000 1630 2646 1 chr6D.!!$F1 1016
2 TraesCS6D01G218900 chr6A 445502617 445507206 4589 False 1055.333333 1483 90.369333 1 4275 3 chr6A.!!$F2 4274
3 TraesCS6D01G218900 chr6B 476175358 476176894 1536 True 910.000000 1035 89.583500 3166 4592 2 chr6B.!!$R2 1426
4 TraesCS6D01G218900 chr6B 476191908 476193137 1229 True 509.000000 702 86.728000 465 1453 2 chr6B.!!$R3 988
5 TraesCS6D01G218900 chr7A 164820322 164821348 1026 False 785.000000 785 80.835000 1623 2658 1 chr7A.!!$F2 1035
6 TraesCS6D01G218900 chr7A 138733946 138734635 689 False 553.000000 553 81.339000 1956 2649 1 chr7A.!!$F1 693
7 TraesCS6D01G218900 chr4B 623427023 623428014 991 False 774.000000 774 81.070000 1625 2616 1 chr4B.!!$F1 991
8 TraesCS6D01G218900 chr2D 422095829 422096832 1003 False 662.000000 662 79.147000 1618 2649 1 chr2D.!!$F1 1031
9 TraesCS6D01G218900 chr1D 493734515 493735542 1027 True 649.000000 649 78.538000 1620 2649 1 chr1D.!!$R1 1029
10 TraesCS6D01G218900 chr3D 231132743 231133748 1005 True 641.000000 641 78.703000 1650 2658 1 chr3D.!!$R1 1008
11 TraesCS6D01G218900 chr3B 283585409 283586451 1042 True 641.000000 641 78.302000 1628 2658 1 chr3B.!!$R1 1030
12 TraesCS6D01G218900 chr5B 13502495 13503256 761 True 571.000000 571 80.516000 1896 2658 1 chr5B.!!$R1 762
13 TraesCS6D01G218900 chr1B 317360662 317361666 1004 True 503.000000 503 76.642000 1612 2645 1 chr1B.!!$R2 1033
14 TraesCS6D01G218900 chr1B 17394748 17395712 964 True 351.000000 351 74.432000 1622 2590 1 chr1B.!!$R1 968
15 TraesCS6D01G218900 chr5D 1519028 1520082 1054 True 436.000000 436 75.229000 1621 2664 1 chr5D.!!$R1 1043
16 TraesCS6D01G218900 chr5D 268691669 268692170 501 True 335.000000 335 79.377000 1619 2114 1 chr5D.!!$R2 495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
241 290 0.034477 ATTTCCCCTGGCGAACGATT 60.034 50.0 0.0 0.0 0.0 3.34 F
688 851 0.037303 ATGACAGGAGCAGGTTGGTG 59.963 55.0 0.0 0.0 0.0 4.17 F
909 1347 0.106719 GATTTCTCCGGCCCCATTCA 60.107 55.0 0.0 0.0 0.0 2.57 F
1334 1777 0.900647 ACGCAGAGCAGGTAGAGGTT 60.901 55.0 0.0 0.0 0.0 3.50 F
2688 3357 0.753111 GATGCCAGATTCACCCCCAC 60.753 60.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1615 2059 2.354821 CGGCCCTTTTGCTAGTAATGAC 59.645 50.000 0.0 0.0 0.00 3.06 R
2520 3183 1.299648 CACAGGGGAATCCTTCGCA 59.700 57.895 0.0 0.0 45.47 5.10 R
2681 3350 2.021652 TTTTTGGGGGAGTGGGGGT 61.022 57.895 0.0 0.0 0.00 4.95 R
3223 5182 1.211703 TCCTGCACAACACAAGGAAGA 59.788 47.619 0.0 0.0 0.00 2.87 R
4637 6710 0.037303 AGGGCAACATCACTCAGGTG 59.963 55.000 0.0 0.0 41.25 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 92 9.444534 ACAACTTCAAACAATTTTTGAAAACAC 57.555 25.926 19.62 0.00 44.67 3.32
94 96 7.421530 TCAAACAATTTTTGAAAACACGGAA 57.578 28.000 11.11 0.00 35.69 4.30
96 98 8.507249 TCAAACAATTTTTGAAAACACGGAAAT 58.493 25.926 11.11 0.00 35.69 2.17
156 159 2.433491 CCGGAAATGGTCGCACGA 60.433 61.111 0.00 0.00 0.00 4.35
158 161 1.366111 CCGGAAATGGTCGCACGAAT 61.366 55.000 0.00 0.00 0.00 3.34
163 166 4.095610 GGAAATGGTCGCACGAATAAAAG 58.904 43.478 0.00 0.00 0.00 2.27
164 167 2.825086 ATGGTCGCACGAATAAAAGC 57.175 45.000 0.00 0.00 0.00 3.51
165 168 1.803334 TGGTCGCACGAATAAAAGCT 58.197 45.000 0.00 0.00 0.00 3.74
174 223 5.613795 CGCACGAATAAAAGCTAACTTGTCA 60.614 40.000 0.00 0.00 35.85 3.58
178 227 6.704493 ACGAATAAAAGCTAACTTGTCACAGA 59.296 34.615 0.00 0.00 35.85 3.41
199 248 0.892063 TGCGGCAAATAGGGTTTTCC 59.108 50.000 0.00 0.00 39.75 3.13
200 249 0.179148 GCGGCAAATAGGGTTTTCCG 60.179 55.000 7.13 7.13 41.82 4.30
215 264 2.264794 CCGGGGAGGAGTTCGTTG 59.735 66.667 0.00 0.00 45.00 4.10
227 276 1.004394 AGTTCGTTGGGAGGGATTTCC 59.996 52.381 0.00 0.00 36.46 3.13
238 287 2.112815 GGATTTCCCCTGGCGAACG 61.113 63.158 0.00 0.00 0.00 3.95
239 288 1.078708 GATTTCCCCTGGCGAACGA 60.079 57.895 0.00 0.00 0.00 3.85
240 289 0.463833 GATTTCCCCTGGCGAACGAT 60.464 55.000 0.00 0.00 0.00 3.73
241 290 0.034477 ATTTCCCCTGGCGAACGATT 60.034 50.000 0.00 0.00 0.00 3.34
242 291 0.250989 TTTCCCCTGGCGAACGATTT 60.251 50.000 0.00 0.00 0.00 2.17
243 292 0.675522 TTCCCCTGGCGAACGATTTC 60.676 55.000 0.00 0.00 0.00 2.17
259 308 0.109643 TTTCGTTCGCTCGATCGGAA 60.110 50.000 16.41 14.96 39.57 4.30
277 326 2.225727 GGAACGTTCCCAGTGAATGAAC 59.774 50.000 33.02 6.34 41.68 3.18
286 335 2.410730 CCAGTGAATGAACCGTTCGTAC 59.589 50.000 6.41 2.81 32.58 3.67
287 336 3.054166 CAGTGAATGAACCGTTCGTACA 58.946 45.455 6.41 3.71 32.58 2.90
289 338 3.005050 AGTGAATGAACCGTTCGTACAGA 59.995 43.478 6.41 0.00 32.58 3.41
298 439 0.963962 GTTCGTACAGACACCTCCCA 59.036 55.000 0.00 0.00 0.00 4.37
311 452 0.323725 CCTCCCAAGGTGGAATGGTG 60.324 60.000 0.00 0.00 40.96 4.17
312 453 0.967380 CTCCCAAGGTGGAATGGTGC 60.967 60.000 0.00 0.00 40.96 5.01
313 454 1.077265 CCCAAGGTGGAATGGTGCT 59.923 57.895 0.00 0.00 40.96 4.40
314 455 0.967380 CCCAAGGTGGAATGGTGCTC 60.967 60.000 0.00 0.00 40.96 4.26
315 456 0.967380 CCAAGGTGGAATGGTGCTCC 60.967 60.000 0.00 0.00 40.96 4.70
316 457 0.967380 CAAGGTGGAATGGTGCTCCC 60.967 60.000 1.59 0.00 31.32 4.30
317 458 2.043953 GGTGGAATGGTGCTCCCC 60.044 66.667 1.59 0.00 31.32 4.81
318 459 2.616458 GGTGGAATGGTGCTCCCCT 61.616 63.158 1.59 0.00 31.32 4.79
319 460 1.077429 GTGGAATGGTGCTCCCCTC 60.077 63.158 1.59 0.00 31.32 4.30
320 461 1.541118 TGGAATGGTGCTCCCCTCA 60.541 57.895 1.59 0.00 31.32 3.86
321 462 1.139498 TGGAATGGTGCTCCCCTCAA 61.139 55.000 1.59 0.00 31.32 3.02
322 463 0.039618 GGAATGGTGCTCCCCTCAAA 59.960 55.000 1.59 0.00 0.00 2.69
323 464 1.549950 GGAATGGTGCTCCCCTCAAAA 60.550 52.381 1.59 0.00 0.00 2.44
324 465 2.247358 GAATGGTGCTCCCCTCAAAAA 58.753 47.619 1.59 0.00 0.00 1.94
377 518 5.099042 ACTATTGGCGTCCTAGATTTGTT 57.901 39.130 0.00 0.00 0.00 2.83
378 519 6.229936 ACTATTGGCGTCCTAGATTTGTTA 57.770 37.500 0.00 0.00 0.00 2.41
379 520 6.646267 ACTATTGGCGTCCTAGATTTGTTAA 58.354 36.000 0.00 0.00 0.00 2.01
380 521 6.761714 ACTATTGGCGTCCTAGATTTGTTAAG 59.238 38.462 0.00 0.00 0.00 1.85
381 522 4.546829 TGGCGTCCTAGATTTGTTAAGT 57.453 40.909 0.00 0.00 0.00 2.24
382 523 4.901868 TGGCGTCCTAGATTTGTTAAGTT 58.098 39.130 0.00 0.00 0.00 2.66
383 524 5.310451 TGGCGTCCTAGATTTGTTAAGTTT 58.690 37.500 0.00 0.00 0.00 2.66
384 525 5.766174 TGGCGTCCTAGATTTGTTAAGTTTT 59.234 36.000 0.00 0.00 0.00 2.43
385 526 6.263617 TGGCGTCCTAGATTTGTTAAGTTTTT 59.736 34.615 0.00 0.00 0.00 1.94
438 579 5.464588 TCATCTTATGGATTTCCCCACAA 57.535 39.130 0.00 0.00 39.34 3.33
633 796 0.903236 ACCGCCTTCTTTCCTCCTAC 59.097 55.000 0.00 0.00 0.00 3.18
634 797 0.902531 CCGCCTTCTTTCCTCCTACA 59.097 55.000 0.00 0.00 0.00 2.74
635 798 1.134670 CCGCCTTCTTTCCTCCTACAG 60.135 57.143 0.00 0.00 0.00 2.74
636 799 1.550976 CGCCTTCTTTCCTCCTACAGT 59.449 52.381 0.00 0.00 0.00 3.55
637 800 2.758979 CGCCTTCTTTCCTCCTACAGTA 59.241 50.000 0.00 0.00 0.00 2.74
644 807 7.766738 CCTTCTTTCCTCCTACAGTATCTTTTC 59.233 40.741 0.00 0.00 0.00 2.29
687 850 0.326264 GATGACAGGAGCAGGTTGGT 59.674 55.000 0.00 0.00 0.00 3.67
688 851 0.037303 ATGACAGGAGCAGGTTGGTG 59.963 55.000 0.00 0.00 0.00 4.17
689 852 1.302832 GACAGGAGCAGGTTGGTGG 60.303 63.158 0.00 0.00 0.00 4.61
690 853 2.056906 GACAGGAGCAGGTTGGTGGT 62.057 60.000 0.00 0.00 0.00 4.16
691 854 1.151450 CAGGAGCAGGTTGGTGGTT 59.849 57.895 0.00 0.00 0.00 3.67
692 855 1.151450 AGGAGCAGGTTGGTGGTTG 59.849 57.895 0.00 0.00 0.00 3.77
693 856 1.903404 GGAGCAGGTTGGTGGTTGG 60.903 63.158 0.00 0.00 0.00 3.77
708 871 2.592032 TTGGTGCTCCATCCGCTGA 61.592 57.895 8.61 0.00 43.91 4.26
776 971 7.611855 GGTTCTTCCATCCATCTAAAAAGAAGA 59.388 37.037 0.00 0.00 37.35 2.87
907 1345 1.152963 CGATTTCTCCGGCCCCATT 60.153 57.895 0.00 0.00 0.00 3.16
909 1347 0.106719 GATTTCTCCGGCCCCATTCA 60.107 55.000 0.00 0.00 0.00 2.57
961 1399 3.411517 CACTCCGGCCCCTTCCAT 61.412 66.667 0.00 0.00 0.00 3.41
968 1406 1.915078 CGGCCCCTTCCATCTCAACT 61.915 60.000 0.00 0.00 0.00 3.16
972 1410 1.821136 CCCCTTCCATCTCAACTTTGC 59.179 52.381 0.00 0.00 0.00 3.68
979 1417 7.415653 CCCTTCCATCTCAACTTTGCTTTATAC 60.416 40.741 0.00 0.00 0.00 1.47
980 1418 7.391148 TTCCATCTCAACTTTGCTTTATACC 57.609 36.000 0.00 0.00 0.00 2.73
982 1420 7.118723 TCCATCTCAACTTTGCTTTATACCAT 58.881 34.615 0.00 0.00 0.00 3.55
984 1422 7.284034 CCATCTCAACTTTGCTTTATACCATCT 59.716 37.037 0.00 0.00 0.00 2.90
985 1423 7.849804 TCTCAACTTTGCTTTATACCATCTC 57.150 36.000 0.00 0.00 0.00 2.75
988 1426 6.599244 TCAACTTTGCTTTATACCATCTCCTG 59.401 38.462 0.00 0.00 0.00 3.86
989 1427 6.067217 ACTTTGCTTTATACCATCTCCTGT 57.933 37.500 0.00 0.00 0.00 4.00
990 1428 5.882557 ACTTTGCTTTATACCATCTCCTGTG 59.117 40.000 0.00 0.00 0.00 3.66
991 1429 5.435686 TTGCTTTATACCATCTCCTGTGT 57.564 39.130 0.00 0.00 0.00 3.72
1073 1516 2.657237 GTACACAGGACTGCCGCT 59.343 61.111 0.00 0.00 39.96 5.52
1140 1583 3.749064 GTCTCCGGCTCAGTCGCA 61.749 66.667 0.00 0.00 0.00 5.10
1169 1612 4.430765 GTCGCCGCCGAGAAGGAA 62.431 66.667 0.00 0.00 45.38 3.36
1172 1615 4.840005 GCCGCCGAGAAGGAAGGG 62.840 72.222 0.00 0.00 45.00 3.95
1333 1776 1.304547 ACGCAGAGCAGGTAGAGGT 60.305 57.895 0.00 0.00 0.00 3.85
1334 1777 0.900647 ACGCAGAGCAGGTAGAGGTT 60.901 55.000 0.00 0.00 0.00 3.50
1370 1813 5.063204 TCGTATAGCCATTGAATTTCAGGG 58.937 41.667 12.44 12.44 0.00 4.45
1385 1828 7.833682 TGAATTTCAGGGCTATTTCAGTTATCA 59.166 33.333 0.00 0.00 0.00 2.15
1390 1833 6.070251 TCAGGGCTATTTCAGTTATCAGTTCA 60.070 38.462 0.00 0.00 0.00 3.18
1397 1840 6.968131 TTTCAGTTATCAGTTCATCTTCCG 57.032 37.500 0.00 0.00 0.00 4.30
1411 1855 8.041323 AGTTCATCTTCCGTACAATAAGAACAT 58.959 33.333 0.00 0.00 35.40 2.71
1414 1858 8.909923 TCATCTTCCGTACAATAAGAACATCTA 58.090 33.333 5.84 0.00 33.26 1.98
1425 1869 7.876068 ACAATAAGAACATCTACGTTTCCTGAA 59.124 33.333 0.00 0.00 0.00 3.02
1431 1875 6.541111 ACATCTACGTTTCCTGAAAAACTC 57.459 37.500 0.00 0.00 37.06 3.01
1444 1888 8.356000 TCCTGAAAAACTCAAAAGGAAAAGTA 57.644 30.769 0.00 0.00 32.17 2.24
1499 1943 3.713826 TTAGAGCAAAAGTAGGGGTGG 57.286 47.619 0.00 0.00 0.00 4.61
1504 1948 1.479757 GCAAAAGTAGGGGTGGACCAA 60.480 52.381 0.00 0.00 42.91 3.67
1514 1958 7.295340 AGTAGGGGTGGACCAATTAAATTATC 58.705 38.462 0.00 0.00 42.91 1.75
1516 1960 5.103855 AGGGGTGGACCAATTAAATTATCGA 60.104 40.000 0.00 0.00 42.91 3.59
1541 1985 5.885230 TCTGTAAATTGCCATGAGAAGTG 57.115 39.130 0.00 0.00 0.00 3.16
1542 1986 5.559770 TCTGTAAATTGCCATGAGAAGTGA 58.440 37.500 0.00 0.00 0.00 3.41
1566 2010 6.790232 AAAAAGGGAGAATTTGTCAACTGA 57.210 33.333 0.00 0.00 0.00 3.41
1569 2013 6.396829 AAGGGAGAATTTGTCAACTGAAAG 57.603 37.500 0.00 0.00 42.29 2.62
1593 2037 8.561932 AGTCTGAAACTTAAAAGCGAATTTTC 57.438 30.769 2.49 0.00 41.40 2.29
1594 2038 8.188139 AGTCTGAAACTTAAAAGCGAATTTTCA 58.812 29.630 2.49 1.84 41.40 2.69
1595 2039 8.803799 GTCTGAAACTTAAAAGCGAATTTTCAA 58.196 29.630 2.49 0.00 41.40 2.69
1608 2052 7.465989 AGCGAATTTTCAATATTTTGCAATGG 58.534 30.769 0.00 0.00 32.61 3.16
1616 2060 9.995003 TTTCAATATTTTGCAATGGAGTTTAGT 57.005 25.926 0.00 0.00 32.61 2.24
1636 2080 2.354821 GTCATTACTAGCAAAAGGGCCG 59.645 50.000 0.00 0.00 0.00 6.13
1723 2178 6.358178 TCACCGAGATAAACTATCACTCTCT 58.642 40.000 0.00 0.00 37.65 3.10
1852 2369 9.360093 ACAAATTTTCGAACATTTTCTAACACA 57.640 25.926 17.40 0.00 0.00 3.72
1855 2372 8.918961 ATTTTCGAACATTTTCTAACACAACA 57.081 26.923 0.00 0.00 0.00 3.33
1858 2414 7.490962 TCGAACATTTTCTAACACAACAGAT 57.509 32.000 0.00 0.00 0.00 2.90
1918 2501 8.331742 GTGAACAATTTTCTTAAATCGGCAAAA 58.668 29.630 0.00 0.00 32.85 2.44
1960 2553 4.414337 TTTTGGGAAATTGGTGGAACAG 57.586 40.909 0.00 0.00 41.80 3.16
1983 2578 9.180678 ACAGTTTTTGAAATTCACGAACATATC 57.819 29.630 17.34 0.00 29.12 1.63
2082 2684 9.316730 ACTATTTTGTAAGTCACGAACAGTTTA 57.683 29.630 0.00 0.00 29.77 2.01
2288 2914 8.245701 TGAATAGTTTTTGAAACCACAAACAC 57.754 30.769 9.06 0.00 39.32 3.32
2291 2917 6.779115 AGTTTTTGAAACCACAAACACTTC 57.221 33.333 0.00 0.00 43.52 3.01
2403 3065 9.944663 AAACAAAACAGAAAAGAAAAAGGAAAC 57.055 25.926 0.00 0.00 0.00 2.78
2616 3282 3.754323 GGGGACAATTTTCATGACGTACA 59.246 43.478 0.00 0.00 0.00 2.90
2617 3283 4.216687 GGGGACAATTTTCATGACGTACAA 59.783 41.667 0.00 0.00 0.00 2.41
2618 3284 5.151389 GGGACAATTTTCATGACGTACAAC 58.849 41.667 0.00 0.00 0.00 3.32
2686 3355 1.152673 GGATGCCAGATTCACCCCC 60.153 63.158 0.00 0.00 0.00 5.40
2688 3357 0.753111 GATGCCAGATTCACCCCCAC 60.753 60.000 0.00 0.00 0.00 4.61
2690 3359 1.077429 GCCAGATTCACCCCCACTC 60.077 63.158 0.00 0.00 0.00 3.51
2691 3360 1.609783 CCAGATTCACCCCCACTCC 59.390 63.158 0.00 0.00 0.00 3.85
2692 3361 1.609783 CAGATTCACCCCCACTCCC 59.390 63.158 0.00 0.00 0.00 4.30
2693 3362 1.619669 AGATTCACCCCCACTCCCC 60.620 63.158 0.00 0.00 0.00 4.81
2694 3363 2.617215 ATTCACCCCCACTCCCCC 60.617 66.667 0.00 0.00 0.00 5.40
2695 3364 3.532039 ATTCACCCCCACTCCCCCA 62.532 63.158 0.00 0.00 0.00 4.96
2696 3365 3.759073 TTCACCCCCACTCCCCCAA 62.759 63.158 0.00 0.00 0.00 4.12
2697 3366 3.189646 CACCCCCACTCCCCCAAA 61.190 66.667 0.00 0.00 0.00 3.28
2698 3367 2.371811 ACCCCCACTCCCCCAAAA 60.372 61.111 0.00 0.00 0.00 2.44
2699 3368 2.021652 ACCCCCACTCCCCCAAAAA 61.022 57.895 0.00 0.00 0.00 1.94
2769 3451 8.572855 ACGTCTACTTACTACCATAGAGTTTT 57.427 34.615 0.00 0.00 0.00 2.43
2815 3497 8.090788 AGGACATAATTAAGCTGTTAGGAGAA 57.909 34.615 0.00 0.00 0.00 2.87
2816 3498 8.718656 AGGACATAATTAAGCTGTTAGGAGAAT 58.281 33.333 0.00 0.00 0.00 2.40
2897 3659 9.844790 ATCATTGTCATTTGTACACATAGTTTG 57.155 29.630 0.00 0.00 0.00 2.93
2898 3660 9.061435 TCATTGTCATTTGTACACATAGTTTGA 57.939 29.630 0.00 0.00 0.00 2.69
2899 3661 9.676195 CATTGTCATTTGTACACATAGTTTGAA 57.324 29.630 0.00 0.00 0.00 2.69
2900 3662 9.677567 ATTGTCATTTGTACACATAGTTTGAAC 57.322 29.630 0.00 0.00 0.00 3.18
2901 3663 8.445275 TGTCATTTGTACACATAGTTTGAACT 57.555 30.769 0.00 1.60 42.91 3.01
2902 3664 8.341903 TGTCATTTGTACACATAGTTTGAACTG 58.658 33.333 6.64 0.00 40.07 3.16
2903 3665 7.803189 GTCATTTGTACACATAGTTTGAACTGG 59.197 37.037 6.64 1.99 40.07 4.00
2904 3666 7.717436 TCATTTGTACACATAGTTTGAACTGGA 59.283 33.333 6.64 0.00 40.07 3.86
2905 3667 8.514594 CATTTGTACACATAGTTTGAACTGGAT 58.485 33.333 6.64 0.00 40.07 3.41
2907 3669 8.542497 TTGTACACATAGTTTGAACTGGATAC 57.458 34.615 6.64 7.62 40.07 2.24
2912 3691 9.131791 ACACATAGTTTGAACTGGATACTTTTT 57.868 29.630 6.64 0.00 40.07 1.94
2921 3700 8.635765 TGAACTGGATACTTTTTATTCTTGCT 57.364 30.769 0.00 0.00 37.61 3.91
2927 3706 9.905713 TGGATACTTTTTATTCTTGCTAGTCAT 57.094 29.630 0.00 0.00 37.61 3.06
2953 3732 7.537715 TGACTTTGTCATGGCAAATATAGTTG 58.462 34.615 24.72 13.95 37.67 3.16
2963 3742 9.404848 CATGGCAAATATAGTTGGATCAGATAT 57.595 33.333 14.26 0.00 0.00 1.63
3013 3796 5.221382 GGTGTGTCCTTGTCTAACTAAGTGA 60.221 44.000 0.00 0.00 0.00 3.41
3028 3811 3.498774 AAGTGAGCTGGTTCTTCACAT 57.501 42.857 0.00 0.00 34.12 3.21
3033 3816 4.005650 TGAGCTGGTTCTTCACATTGATC 58.994 43.478 0.00 0.00 0.00 2.92
3042 3826 8.252417 TGGTTCTTCACATTGATCATATTTTGG 58.748 33.333 0.00 0.00 0.00 3.28
3058 3842 7.496920 TCATATTTTGGTTTGTTTGCATGACAA 59.503 29.630 10.98 10.98 35.36 3.18
3059 3843 4.935885 TTTGGTTTGTTTGCATGACAAC 57.064 36.364 13.77 4.14 38.23 3.32
3064 3848 2.575694 TGTTTGCATGACAACCACAC 57.424 45.000 0.00 0.00 38.23 3.82
3071 3855 1.962807 CATGACAACCACACACCCATT 59.037 47.619 0.00 0.00 0.00 3.16
3094 3878 6.505048 TGTGGGATTATTCTCATGATCTGT 57.495 37.500 0.00 0.00 34.06 3.41
3095 3879 6.293698 TGTGGGATTATTCTCATGATCTGTG 58.706 40.000 0.00 0.00 34.06 3.66
3101 3900 9.553064 GGATTATTCTCATGATCTGTGTTAACT 57.447 33.333 7.22 0.00 0.00 2.24
3116 3915 9.747898 TCTGTGTTAACTAATATCCCACATTTT 57.252 29.630 7.22 0.00 31.67 1.82
3117 3916 9.787532 CTGTGTTAACTAATATCCCACATTTTG 57.212 33.333 7.22 0.00 31.67 2.44
3138 3937 8.810652 TTTTGTGCTATTCAAACTTAATCACC 57.189 30.769 0.00 0.00 35.05 4.02
3145 3946 6.834168 ATTCAAACTTAATCACCGAACCAT 57.166 33.333 0.00 0.00 0.00 3.55
3157 3958 6.746745 TCACCGAACCATCTTAATTTTACC 57.253 37.500 0.00 0.00 0.00 2.85
3158 3959 6.239396 TCACCGAACCATCTTAATTTTACCA 58.761 36.000 0.00 0.00 0.00 3.25
3159 3960 6.715718 TCACCGAACCATCTTAATTTTACCAA 59.284 34.615 0.00 0.00 0.00 3.67
3160 3961 6.804783 CACCGAACCATCTTAATTTTACCAAC 59.195 38.462 0.00 0.00 0.00 3.77
3161 3962 6.025280 CCGAACCATCTTAATTTTACCAACG 58.975 40.000 0.00 0.00 0.00 4.10
3196 5155 9.995003 AACCATTGTATTGTAATCAATGTTTGT 57.005 25.926 17.93 11.68 43.63 2.83
3197 5156 9.421806 ACCATTGTATTGTAATCAATGTTTGTG 57.578 29.630 17.93 10.93 43.63 3.33
3222 5181 9.166173 TGACATGTTTATTCTTCCTTCATACTG 57.834 33.333 0.00 0.00 0.00 2.74
3223 5182 9.167311 GACATGTTTATTCTTCCTTCATACTGT 57.833 33.333 0.00 0.00 0.00 3.55
3228 5190 8.884726 GTTTATTCTTCCTTCATACTGTCTTCC 58.115 37.037 0.00 0.00 0.00 3.46
3260 5222 1.771255 AGGATGTTCTATGGACCTGGC 59.229 52.381 0.00 0.00 0.00 4.85
3338 5300 6.712095 TGTCATTTGAGCTGAGTGATTTAACT 59.288 34.615 0.00 0.00 0.00 2.24
3339 5301 7.229306 TGTCATTTGAGCTGAGTGATTTAACTT 59.771 33.333 0.00 0.00 0.00 2.66
3395 5357 1.259609 CCTTGCAAGAATGGGAGCAA 58.740 50.000 28.05 0.00 43.90 3.91
3473 5435 2.131183 GATGAAGATGGTAGAGCGCAC 58.869 52.381 11.47 2.25 0.00 5.34
3490 5452 2.608998 CGCACGCTGAGATATCTGGAAT 60.609 50.000 10.74 0.00 0.00 3.01
3502 5464 1.471119 TCTGGAATAGGCTTCGACGT 58.529 50.000 0.00 0.00 0.00 4.34
3533 5495 3.005554 ACAGAGAAATCATGAGTTGGCG 58.994 45.455 14.00 1.72 0.00 5.69
3566 5528 2.408050 AGAGCTGAAACTACAACTGCG 58.592 47.619 0.00 0.00 34.59 5.18
3649 5611 5.434408 CATCCATGAAGATGAAGTGGAGAA 58.566 41.667 6.18 0.00 45.43 2.87
3652 5614 4.515361 CATGAAGATGAAGTGGAGAAGCT 58.485 43.478 0.00 0.00 0.00 3.74
3663 5625 2.231721 GTGGAGAAGCTAGAGGAAACGT 59.768 50.000 0.00 0.00 0.00 3.99
3664 5626 2.231478 TGGAGAAGCTAGAGGAAACGTG 59.769 50.000 0.00 0.00 0.00 4.49
3691 5653 4.523943 TGCAGATTTAAGGAACACAAGCAT 59.476 37.500 0.00 0.00 0.00 3.79
3746 5708 0.396974 AGAAGGCAAAACAGGCACCA 60.397 50.000 0.00 0.00 36.37 4.17
3748 5710 1.402107 AAGGCAAAACAGGCACCAGG 61.402 55.000 0.00 0.00 36.37 4.45
3762 5724 2.549992 GCACCAGGTGTAGATGTGAACA 60.550 50.000 21.26 0.00 35.75 3.18
3775 5737 2.846193 TGTGAACAGTAGCAGAAACCC 58.154 47.619 0.00 0.00 0.00 4.11
3787 5749 0.110486 AGAAACCCGTGAAGGTGCAT 59.890 50.000 0.00 0.00 40.05 3.96
3805 5767 2.683916 TGAGGATCAAGGGAAGCGT 58.316 52.632 0.00 0.00 45.97 5.07
3808 5770 1.139853 GAGGATCAAGGGAAGCGTCAT 59.860 52.381 1.14 0.00 33.17 3.06
3809 5771 2.365617 GAGGATCAAGGGAAGCGTCATA 59.634 50.000 1.14 0.00 33.17 2.15
3811 5773 4.160329 AGGATCAAGGGAAGCGTCATATA 58.840 43.478 1.14 0.00 0.00 0.86
3847 5809 8.805175 ACAATACAAACATCCATCAAGATGAAA 58.195 29.630 11.48 0.24 45.43 2.69
3857 5819 5.653769 TCCATCAAGATGAAATGGAGAAACC 59.346 40.000 11.48 0.00 43.06 3.27
3919 5881 3.822940 TGTGCCTATTGATGATGATGCA 58.177 40.909 0.00 0.00 0.00 3.96
3945 5907 6.174049 AGAGTTGTGCCTATTTAAGAAGGAC 58.826 40.000 8.89 5.55 34.58 3.85
3954 6016 7.015292 TGCCTATTTAAGAAGGACGTAGATGAT 59.985 37.037 8.89 0.00 34.58 2.45
4009 6071 4.348486 TCCTCTCAACTCTTACTCTGCAT 58.652 43.478 0.00 0.00 0.00 3.96
4014 6076 3.748048 TCAACTCTTACTCTGCATTGCAC 59.252 43.478 7.38 0.00 33.79 4.57
4029 6091 0.397564 TGCACCTCACTCTGCAATGA 59.602 50.000 0.00 0.00 40.45 2.57
4082 6144 8.986847 CCATGAGAGCATTACTAAGTGAAATAG 58.013 37.037 0.00 0.00 30.68 1.73
4211 6273 0.777446 AAGGGTAGGCACAACCACAT 59.223 50.000 6.11 0.00 43.14 3.21
4233 6297 6.601613 ACATAAGGTTGCCAAATTTCTATCGA 59.398 34.615 0.00 0.00 0.00 3.59
4279 6345 6.570672 ATTATCTGAACACATGGATGCATC 57.429 37.500 18.81 18.81 0.00 3.91
4281 6347 4.758773 TCTGAACACATGGATGCATCTA 57.241 40.909 25.28 20.79 0.00 1.98
4321 6387 6.037500 CAGAAAATATCGATGCTTCCAGTGAA 59.962 38.462 8.54 0.00 0.00 3.18
4340 6406 4.211374 GTGAACTTTGTGAGTAGCGAACAT 59.789 41.667 0.00 0.00 37.72 2.71
4342 6408 5.633601 TGAACTTTGTGAGTAGCGAACATAG 59.366 40.000 0.00 0.00 37.72 2.23
4359 6425 6.967199 CGAACATAGAGGGCAAAAGTTATTTC 59.033 38.462 0.00 0.00 0.00 2.17
4364 6430 5.310451 AGAGGGCAAAAGTTATTTCGTACA 58.690 37.500 0.00 0.00 0.00 2.90
4385 6451 7.865889 CGTACATACTATGTGGATGCTAAGAAA 59.134 37.037 11.39 0.00 44.60 2.52
4425 6491 4.882671 TTAGCTAGCTAATTGCAGCAAC 57.117 40.909 29.22 0.00 44.35 4.17
4426 6492 2.715046 AGCTAGCTAATTGCAGCAACA 58.285 42.857 17.69 0.04 44.35 3.33
4427 6493 3.084039 AGCTAGCTAATTGCAGCAACAA 58.916 40.909 17.69 0.05 44.35 2.83
4428 6494 3.119708 AGCTAGCTAATTGCAGCAACAAC 60.120 43.478 17.69 0.35 44.35 3.32
4429 6495 3.366273 GCTAGCTAATTGCAGCAACAACA 60.366 43.478 10.85 0.00 44.35 3.33
4430 6496 3.017265 AGCTAATTGCAGCAACAACAC 57.983 42.857 10.85 0.00 44.35 3.32
4432 6498 2.472488 GCTAATTGCAGCAACAACACAC 59.528 45.455 10.85 0.00 41.40 3.82
4467 6536 7.296628 AGGAGGCAGTATAAGTAGATTTCTG 57.703 40.000 0.00 0.00 0.00 3.02
4468 6537 5.929415 GGAGGCAGTATAAGTAGATTTCTGC 59.071 44.000 0.00 0.00 43.72 4.26
4471 6540 5.402867 GGCAGTATAAGTAGATTTCTGCGAC 59.597 44.000 0.00 0.00 44.85 5.19
4476 6545 9.601217 AGTATAAGTAGATTTCTGCGACAAATT 57.399 29.630 0.00 0.00 33.62 1.82
4479 6548 7.440523 AAGTAGATTTCTGCGACAAATTCTT 57.559 32.000 0.00 0.00 33.62 2.52
4485 6554 3.067106 TCTGCGACAAATTCTTCACCTC 58.933 45.455 0.00 0.00 0.00 3.85
4486 6555 2.807967 CTGCGACAAATTCTTCACCTCA 59.192 45.455 0.00 0.00 0.00 3.86
4490 6559 4.726416 CGACAAATTCTTCACCTCATTGG 58.274 43.478 0.00 0.00 42.93 3.16
4491 6560 4.379813 CGACAAATTCTTCACCTCATTGGG 60.380 45.833 0.00 0.00 41.11 4.12
4503 6572 5.887598 TCACCTCATTGGGATACAAATTGAG 59.112 40.000 0.00 0.00 43.46 3.02
4507 6576 7.592885 CTCATTGGGATACAAATTGAGGATT 57.407 36.000 0.00 0.00 43.46 3.01
4508 6577 7.350744 TCATTGGGATACAAATTGAGGATTG 57.649 36.000 0.00 0.00 43.46 2.67
4522 6591 6.463995 TTGAGGATTGTGCAAACTAAGTTT 57.536 33.333 0.00 0.00 36.05 2.66
4541 6610 9.303537 CTAAGTTTGGTAGCAGAACTAGATAAC 57.696 37.037 17.07 7.32 33.54 1.89
4544 6613 6.808321 TTGGTAGCAGAACTAGATAACCAT 57.192 37.500 0.00 0.00 0.00 3.55
4545 6614 6.161855 TGGTAGCAGAACTAGATAACCATG 57.838 41.667 0.00 0.00 0.00 3.66
4546 6615 4.991687 GGTAGCAGAACTAGATAACCATGC 59.008 45.833 0.00 0.00 0.00 4.06
4547 6616 4.078639 AGCAGAACTAGATAACCATGCC 57.921 45.455 0.00 0.00 32.95 4.40
4548 6617 3.142174 GCAGAACTAGATAACCATGCCC 58.858 50.000 0.00 0.00 0.00 5.36
4549 6618 3.744660 CAGAACTAGATAACCATGCCCC 58.255 50.000 0.00 0.00 0.00 5.80
4563 6636 3.373565 CCCCTTCGGGTTGCTTGC 61.374 66.667 0.00 0.00 45.50 4.01
4572 6645 1.539388 CGGGTTGCTTGCTTTGTGATA 59.461 47.619 0.00 0.00 0.00 2.15
4592 6665 3.885484 AAAGCACACGAGAACATCAAG 57.115 42.857 0.00 0.00 0.00 3.02
4593 6666 1.151668 AGCACACGAGAACATCAAGC 58.848 50.000 0.00 0.00 0.00 4.01
4594 6667 0.867746 GCACACGAGAACATCAAGCA 59.132 50.000 0.00 0.00 0.00 3.91
4595 6668 1.466167 GCACACGAGAACATCAAGCAT 59.534 47.619 0.00 0.00 0.00 3.79
4596 6669 2.475187 GCACACGAGAACATCAAGCATC 60.475 50.000 0.00 0.00 0.00 3.91
4597 6670 2.998670 CACACGAGAACATCAAGCATCT 59.001 45.455 0.00 0.00 0.00 2.90
4598 6671 2.998670 ACACGAGAACATCAAGCATCTG 59.001 45.455 0.00 0.00 0.00 2.90
4599 6672 3.256558 CACGAGAACATCAAGCATCTGA 58.743 45.455 0.00 0.00 0.00 3.27
4600 6673 3.869832 CACGAGAACATCAAGCATCTGAT 59.130 43.478 0.00 0.00 36.45 2.90
4601 6674 5.045872 CACGAGAACATCAAGCATCTGATA 58.954 41.667 0.00 0.00 34.20 2.15
4602 6675 5.521372 CACGAGAACATCAAGCATCTGATAA 59.479 40.000 0.00 0.00 34.20 1.75
4603 6676 6.202379 CACGAGAACATCAAGCATCTGATAAT 59.798 38.462 0.00 0.00 34.20 1.28
4604 6677 6.202379 ACGAGAACATCAAGCATCTGATAATG 59.798 38.462 0.00 0.00 34.20 1.90
4605 6678 6.202379 CGAGAACATCAAGCATCTGATAATGT 59.798 38.462 0.00 0.00 34.20 2.71
4606 6679 7.383300 CGAGAACATCAAGCATCTGATAATGTA 59.617 37.037 0.00 0.00 34.20 2.29
4607 6680 8.969260 AGAACATCAAGCATCTGATAATGTAA 57.031 30.769 0.00 0.00 34.20 2.41
4608 6681 9.570468 AGAACATCAAGCATCTGATAATGTAAT 57.430 29.630 0.00 0.00 34.20 1.89
4609 6682 9.608617 GAACATCAAGCATCTGATAATGTAATG 57.391 33.333 0.00 0.00 34.20 1.90
4610 6683 7.591165 ACATCAAGCATCTGATAATGTAATGC 58.409 34.615 0.00 0.00 42.31 3.56
4611 6684 6.564709 TCAAGCATCTGATAATGTAATGCC 57.435 37.500 2.27 0.00 42.84 4.40
4612 6685 5.474532 TCAAGCATCTGATAATGTAATGCCC 59.525 40.000 2.27 0.00 42.84 5.36
4613 6686 5.252586 AGCATCTGATAATGTAATGCCCT 57.747 39.130 2.27 0.00 42.84 5.19
4614 6687 5.638133 AGCATCTGATAATGTAATGCCCTT 58.362 37.500 2.27 0.00 42.84 3.95
4615 6688 5.709164 AGCATCTGATAATGTAATGCCCTTC 59.291 40.000 2.27 0.00 42.84 3.46
4616 6689 5.474532 GCATCTGATAATGTAATGCCCTTCA 59.525 40.000 0.00 0.00 37.37 3.02
4617 6690 6.569226 GCATCTGATAATGTAATGCCCTTCAC 60.569 42.308 0.00 0.00 37.37 3.18
4618 6691 5.056480 TCTGATAATGTAATGCCCTTCACG 58.944 41.667 0.00 0.00 0.00 4.35
4619 6692 3.563808 TGATAATGTAATGCCCTTCACGC 59.436 43.478 0.00 0.00 0.00 5.34
4620 6693 1.832883 AATGTAATGCCCTTCACGCA 58.167 45.000 0.00 0.00 41.28 5.24
4622 6695 1.378531 TGTAATGCCCTTCACGCATC 58.621 50.000 0.00 0.00 46.09 3.91
4623 6696 1.339535 TGTAATGCCCTTCACGCATCA 60.340 47.619 0.00 0.00 46.09 3.07
4624 6697 1.331756 GTAATGCCCTTCACGCATCAG 59.668 52.381 0.00 0.00 46.09 2.90
4625 6698 0.322816 AATGCCCTTCACGCATCAGT 60.323 50.000 0.00 0.00 46.09 3.41
4626 6699 0.322816 ATGCCCTTCACGCATCAGTT 60.323 50.000 0.00 0.00 43.42 3.16
4627 6700 0.955428 TGCCCTTCACGCATCAGTTC 60.955 55.000 0.00 0.00 0.00 3.01
4628 6701 0.674895 GCCCTTCACGCATCAGTTCT 60.675 55.000 0.00 0.00 0.00 3.01
4629 6702 1.081892 CCCTTCACGCATCAGTTCTG 58.918 55.000 0.00 0.00 0.00 3.02
4630 6703 1.081892 CCTTCACGCATCAGTTCTGG 58.918 55.000 0.00 0.00 0.00 3.86
4631 6704 1.609061 CCTTCACGCATCAGTTCTGGT 60.609 52.381 0.00 0.00 0.00 4.00
4632 6705 2.146342 CTTCACGCATCAGTTCTGGTT 58.854 47.619 0.00 0.00 0.00 3.67
4633 6706 1.795768 TCACGCATCAGTTCTGGTTC 58.204 50.000 0.00 0.00 0.00 3.62
4634 6707 0.798776 CACGCATCAGTTCTGGTTCC 59.201 55.000 0.00 0.00 0.00 3.62
4635 6708 0.687354 ACGCATCAGTTCTGGTTCCT 59.313 50.000 0.00 0.00 0.00 3.36
4636 6709 1.081892 CGCATCAGTTCTGGTTCCTG 58.918 55.000 0.00 0.00 0.00 3.86
4637 6710 0.807496 GCATCAGTTCTGGTTCCTGC 59.193 55.000 0.00 0.00 0.00 4.85
4638 6711 1.883638 GCATCAGTTCTGGTTCCTGCA 60.884 52.381 0.00 0.00 0.00 4.41
4639 6712 1.808945 CATCAGTTCTGGTTCCTGCAC 59.191 52.381 0.00 0.00 0.00 4.57
4640 6713 0.108585 TCAGTTCTGGTTCCTGCACC 59.891 55.000 0.00 0.00 37.34 5.01
4641 6714 0.109342 CAGTTCTGGTTCCTGCACCT 59.891 55.000 0.00 0.00 37.75 4.00
4642 6715 0.109342 AGTTCTGGTTCCTGCACCTG 59.891 55.000 0.00 0.00 37.75 4.00
4643 6716 0.108585 GTTCTGGTTCCTGCACCTGA 59.891 55.000 0.00 0.00 41.63 3.86
4644 6717 0.397941 TTCTGGTTCCTGCACCTGAG 59.602 55.000 1.79 0.00 43.46 3.35
4645 6718 0.764369 TCTGGTTCCTGCACCTGAGT 60.764 55.000 0.00 0.00 39.25 3.41
4646 6719 4.452586 TTCTGGTTCCTGCACCTGAGTG 62.453 54.545 1.79 0.00 43.46 3.51
4656 6729 2.468015 ACCTGAGTGATGTTGCCCT 58.532 52.632 0.00 0.00 0.00 5.19
4657 6730 0.773644 ACCTGAGTGATGTTGCCCTT 59.226 50.000 0.00 0.00 0.00 3.95
4658 6731 1.171308 CCTGAGTGATGTTGCCCTTG 58.829 55.000 0.00 0.00 0.00 3.61
4659 6732 1.171308 CTGAGTGATGTTGCCCTTGG 58.829 55.000 0.00 0.00 0.00 3.61
4669 6742 2.356667 GCCCTTGGCCTACTTGCT 59.643 61.111 3.32 0.00 44.06 3.91
4670 6743 1.750780 GCCCTTGGCCTACTTGCTC 60.751 63.158 3.32 0.00 44.06 4.26
4671 6744 1.077429 CCCTTGGCCTACTTGCTCC 60.077 63.158 3.32 0.00 0.00 4.70
4672 6745 1.566298 CCCTTGGCCTACTTGCTCCT 61.566 60.000 3.32 0.00 0.00 3.69
4673 6746 0.393537 CCTTGGCCTACTTGCTCCTG 60.394 60.000 3.32 0.00 0.00 3.86
4674 6747 0.393537 CTTGGCCTACTTGCTCCTGG 60.394 60.000 3.32 0.00 0.00 4.45
4675 6748 0.840288 TTGGCCTACTTGCTCCTGGA 60.840 55.000 3.32 0.00 0.00 3.86
4676 6749 1.222113 GGCCTACTTGCTCCTGGAC 59.778 63.158 0.00 0.00 0.00 4.02
4677 6750 1.222113 GCCTACTTGCTCCTGGACC 59.778 63.158 0.00 0.00 0.00 4.46
4678 6751 1.517832 CCTACTTGCTCCTGGACCG 59.482 63.158 0.00 0.00 0.00 4.79
4679 6752 1.517832 CTACTTGCTCCTGGACCGG 59.482 63.158 0.00 0.00 0.00 5.28
4680 6753 0.970937 CTACTTGCTCCTGGACCGGA 60.971 60.000 9.46 3.31 0.00 5.14
4681 6754 1.255667 TACTTGCTCCTGGACCGGAC 61.256 60.000 9.46 0.00 0.00 4.79
4682 6755 3.649277 CTTGCTCCTGGACCGGACG 62.649 68.421 9.46 0.00 0.00 4.79
4683 6756 4.671590 TGCTCCTGGACCGGACGA 62.672 66.667 9.46 0.00 0.00 4.20
4684 6757 3.148279 GCTCCTGGACCGGACGAT 61.148 66.667 9.46 0.00 0.00 3.73
4685 6758 3.121019 CTCCTGGACCGGACGATC 58.879 66.667 9.46 0.00 0.00 3.69
4686 6759 1.454111 CTCCTGGACCGGACGATCT 60.454 63.158 9.46 0.00 0.00 2.75
4687 6760 0.179026 CTCCTGGACCGGACGATCTA 60.179 60.000 9.46 0.00 0.00 1.98
4688 6761 0.179026 TCCTGGACCGGACGATCTAG 60.179 60.000 9.46 1.64 0.00 2.43
4689 6762 1.655329 CTGGACCGGACGATCTAGC 59.345 63.158 9.46 0.00 0.00 3.42
4690 6763 2.119147 CTGGACCGGACGATCTAGCG 62.119 65.000 9.46 0.00 37.29 4.26
4691 6764 1.890979 GGACCGGACGATCTAGCGA 60.891 63.158 9.46 0.00 34.83 4.93
4692 6765 1.570475 GACCGGACGATCTAGCGAG 59.430 63.158 9.46 0.00 34.83 5.03
4693 6766 1.843734 GACCGGACGATCTAGCGAGG 61.844 65.000 9.46 0.00 34.83 4.63
4694 6767 2.618219 CCGGACGATCTAGCGAGGG 61.618 68.421 0.00 0.00 34.83 4.30
4695 6768 1.597302 CGGACGATCTAGCGAGGGA 60.597 63.158 0.00 0.00 34.83 4.20
4696 6769 1.843734 CGGACGATCTAGCGAGGGAC 61.844 65.000 0.00 0.00 34.83 4.46
4698 6771 0.589223 GACGATCTAGCGAGGGACTG 59.411 60.000 0.00 0.00 41.55 3.51
4699 6772 0.820074 ACGATCTAGCGAGGGACTGG 60.820 60.000 0.00 0.00 41.55 4.00
4700 6773 0.820074 CGATCTAGCGAGGGACTGGT 60.820 60.000 0.00 0.00 41.55 4.00
4701 6774 0.671251 GATCTAGCGAGGGACTGGTG 59.329 60.000 0.00 0.00 41.55 4.17
4702 6775 0.757188 ATCTAGCGAGGGACTGGTGG 60.757 60.000 0.00 0.00 41.55 4.61
4703 6776 1.682684 CTAGCGAGGGACTGGTGGT 60.683 63.158 0.00 0.00 41.55 4.16
4704 6777 1.949847 CTAGCGAGGGACTGGTGGTG 61.950 65.000 0.00 0.00 41.55 4.17
4706 6779 3.314331 CGAGGGACTGGTGGTGCT 61.314 66.667 0.00 0.00 41.55 4.40
4707 6780 2.665603 GAGGGACTGGTGGTGCTC 59.334 66.667 0.00 0.00 41.55 4.26
4708 6781 2.930562 AGGGACTGGTGGTGCTCC 60.931 66.667 0.00 0.00 37.18 4.70
4709 6782 3.249189 GGGACTGGTGGTGCTCCA 61.249 66.667 2.64 2.64 42.05 3.86
4710 6783 2.606587 GGGACTGGTGGTGCTCCAT 61.607 63.158 11.31 0.00 46.20 3.41
4711 6784 1.380302 GGACTGGTGGTGCTCCATT 59.620 57.895 11.31 0.00 46.20 3.16
4712 6785 0.678048 GGACTGGTGGTGCTCCATTC 60.678 60.000 11.31 7.40 46.20 2.67
4713 6786 0.326264 GACTGGTGGTGCTCCATTCT 59.674 55.000 11.31 0.00 46.20 2.40
4714 6787 0.773644 ACTGGTGGTGCTCCATTCTT 59.226 50.000 11.31 0.00 46.20 2.52
4715 6788 1.985159 ACTGGTGGTGCTCCATTCTTA 59.015 47.619 11.31 0.00 46.20 2.10
4716 6789 2.026822 ACTGGTGGTGCTCCATTCTTAG 60.027 50.000 11.31 7.75 46.20 2.18
4717 6790 1.340017 TGGTGGTGCTCCATTCTTAGC 60.340 52.381 11.31 0.00 46.20 3.09
4718 6791 1.340017 GGTGGTGCTCCATTCTTAGCA 60.340 52.381 11.31 0.00 46.20 3.49
4721 6794 3.483954 TGCTCCATTCTTAGCAGGC 57.516 52.632 0.00 0.00 43.56 4.85
4722 6795 0.914644 TGCTCCATTCTTAGCAGGCT 59.085 50.000 0.00 0.00 43.56 4.58
4723 6796 1.307097 GCTCCATTCTTAGCAGGCTG 58.693 55.000 10.94 10.94 38.63 4.85
4724 6797 1.307097 CTCCATTCTTAGCAGGCTGC 58.693 55.000 31.56 31.56 45.46 5.25
4725 6798 0.107017 TCCATTCTTAGCAGGCTGCC 60.107 55.000 34.33 17.49 46.52 4.85
4726 6799 1.442526 CCATTCTTAGCAGGCTGCCG 61.443 60.000 34.33 22.73 46.52 5.69
4727 6800 1.153086 ATTCTTAGCAGGCTGCCGG 60.153 57.895 34.33 23.47 46.52 6.13
4728 6801 3.976701 TTCTTAGCAGGCTGCCGGC 62.977 63.158 34.33 32.24 46.52 6.13
4737 6810 3.747976 GCTGCCGGCGACCAAAAT 61.748 61.111 23.90 0.00 0.00 1.82
4738 6811 2.485122 CTGCCGGCGACCAAAATC 59.515 61.111 23.90 0.00 0.00 2.17
4739 6812 2.033448 TGCCGGCGACCAAAATCT 59.967 55.556 23.90 0.00 0.00 2.40
4740 6813 2.257286 CTGCCGGCGACCAAAATCTG 62.257 60.000 23.90 0.00 0.00 2.90
4741 6814 2.038269 GCCGGCGACCAAAATCTGA 61.038 57.895 12.58 0.00 0.00 3.27
4742 6815 1.982073 GCCGGCGACCAAAATCTGAG 61.982 60.000 12.58 0.00 0.00 3.35
4743 6816 0.391130 CCGGCGACCAAAATCTGAGA 60.391 55.000 9.30 0.00 0.00 3.27
4744 6817 1.438651 CGGCGACCAAAATCTGAGAA 58.561 50.000 0.00 0.00 0.00 2.87
4745 6818 1.394917 CGGCGACCAAAATCTGAGAAG 59.605 52.381 0.00 0.00 0.00 2.85
4746 6819 1.131315 GGCGACCAAAATCTGAGAAGC 59.869 52.381 0.00 0.00 0.00 3.86
4747 6820 1.201965 GCGACCAAAATCTGAGAAGCG 60.202 52.381 0.00 0.00 0.00 4.68
4748 6821 2.069273 CGACCAAAATCTGAGAAGCGT 58.931 47.619 0.00 0.00 0.00 5.07
4749 6822 2.092838 CGACCAAAATCTGAGAAGCGTC 59.907 50.000 0.00 0.00 0.00 5.19
4750 6823 2.069273 ACCAAAATCTGAGAAGCGTCG 58.931 47.619 0.00 0.00 0.00 5.12
4751 6824 2.288825 ACCAAAATCTGAGAAGCGTCGA 60.289 45.455 0.00 0.00 0.00 4.20
4752 6825 2.092838 CCAAAATCTGAGAAGCGTCGAC 59.907 50.000 5.18 5.18 0.00 4.20
4753 6826 1.618861 AAATCTGAGAAGCGTCGACG 58.381 50.000 32.57 32.57 43.27 5.12
4754 6827 0.803117 AATCTGAGAAGCGTCGACGA 59.197 50.000 39.74 17.86 43.02 4.20
4755 6828 1.018148 ATCTGAGAAGCGTCGACGAT 58.982 50.000 39.74 32.94 43.02 3.73
4772 6845 2.391879 CGATTATCGTCTCGGGTTTCC 58.608 52.381 6.43 0.00 34.72 3.13
4773 6846 3.166638 CGATTATCGTCTCGGGTTTCCG 61.167 54.545 6.43 0.00 45.48 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 67 8.617267 CGTGTTTTCAAAAATTGTTTGAAGTTG 58.383 29.630 13.12 2.67 45.55 3.16
72 74 9.684448 AAATTTCCGTGTTTTCAAAAATTGTTT 57.316 22.222 0.00 0.00 33.31 2.83
111 113 4.785376 AGAACCATCTGGATAGTTCCTTGT 59.215 41.667 14.75 0.00 43.07 3.16
112 114 5.104776 TGAGAACCATCTGGATAGTTCCTTG 60.105 44.000 14.75 0.00 43.07 3.61
141 144 3.750639 TTTATTCGTGCGACCATTTCC 57.249 42.857 0.00 0.00 0.00 3.13
156 159 7.809806 GCATTCTGTGACAAGTTAGCTTTTATT 59.190 33.333 0.00 0.00 31.49 1.40
158 161 6.565811 CGCATTCTGTGACAAGTTAGCTTTTA 60.566 38.462 0.00 0.00 31.49 1.52
163 166 2.159653 CCGCATTCTGTGACAAGTTAGC 60.160 50.000 0.00 0.00 0.00 3.09
164 167 2.159653 GCCGCATTCTGTGACAAGTTAG 60.160 50.000 0.00 0.00 0.00 2.34
165 168 1.804151 GCCGCATTCTGTGACAAGTTA 59.196 47.619 0.00 0.00 0.00 2.24
174 223 1.340991 ACCCTATTTGCCGCATTCTGT 60.341 47.619 0.00 0.00 0.00 3.41
178 227 2.093711 GGAAAACCCTATTTGCCGCATT 60.094 45.455 0.00 0.00 0.00 3.56
199 248 2.264794 CCAACGAACTCCTCCCCG 59.735 66.667 0.00 0.00 0.00 5.73
200 249 1.900545 CTCCCAACGAACTCCTCCCC 61.901 65.000 0.00 0.00 0.00 4.81
238 287 0.498927 CCGATCGAGCGAACGAAATC 59.501 55.000 26.68 0.00 45.16 2.17
239 288 0.099968 TCCGATCGAGCGAACGAAAT 59.900 50.000 26.68 0.00 45.16 2.17
240 289 0.109643 TTCCGATCGAGCGAACGAAA 60.110 50.000 26.68 7.09 45.16 3.46
241 290 0.795735 GTTCCGATCGAGCGAACGAA 60.796 55.000 26.68 16.52 45.16 3.85
242 291 1.226211 GTTCCGATCGAGCGAACGA 60.226 57.895 26.68 10.77 41.82 3.85
243 292 3.286669 GTTCCGATCGAGCGAACG 58.713 61.111 26.68 14.27 39.56 3.95
259 308 1.876416 CGGTTCATTCACTGGGAACGT 60.876 52.381 0.00 0.00 41.31 3.99
277 326 0.109412 GGAGGTGTCTGTACGAACGG 60.109 60.000 0.00 0.00 0.00 4.44
298 439 1.384191 GGGAGCACCATTCCACCTT 59.616 57.895 1.58 0.00 39.85 3.50
331 472 3.321968 GGCACAATTCCACCTCTCTTTTT 59.678 43.478 0.00 0.00 0.00 1.94
332 473 2.893489 GGCACAATTCCACCTCTCTTTT 59.107 45.455 0.00 0.00 0.00 2.27
333 474 2.158475 TGGCACAATTCCACCTCTCTTT 60.158 45.455 0.00 0.00 31.92 2.52
334 475 1.425066 TGGCACAATTCCACCTCTCTT 59.575 47.619 0.00 0.00 31.92 2.85
335 476 1.067295 TGGCACAATTCCACCTCTCT 58.933 50.000 0.00 0.00 31.92 3.10
336 477 3.650647 TGGCACAATTCCACCTCTC 57.349 52.632 0.00 0.00 31.92 3.20
400 541 9.401058 CCATAAGATGAAACTTGAGTAATCCTT 57.599 33.333 0.00 0.00 0.00 3.36
401 542 8.772250 TCCATAAGATGAAACTTGAGTAATCCT 58.228 33.333 0.00 0.00 0.00 3.24
402 543 8.964476 TCCATAAGATGAAACTTGAGTAATCC 57.036 34.615 0.00 0.00 0.00 3.01
406 547 9.396022 GGAAATCCATAAGATGAAACTTGAGTA 57.604 33.333 0.00 0.00 34.56 2.59
407 548 7.340487 GGGAAATCCATAAGATGAAACTTGAGT 59.660 37.037 1.22 0.00 34.56 3.41
408 549 7.201857 GGGGAAATCCATAAGATGAAACTTGAG 60.202 40.741 1.22 0.00 34.56 3.02
409 550 6.607198 GGGGAAATCCATAAGATGAAACTTGA 59.393 38.462 1.22 0.00 34.56 3.02
444 585 8.341903 TCATGGTTGCACGAAACTATTATTATG 58.658 33.333 0.00 0.00 29.69 1.90
445 586 8.445275 TCATGGTTGCACGAAACTATTATTAT 57.555 30.769 0.00 0.00 29.69 1.28
446 587 7.851387 TCATGGTTGCACGAAACTATTATTA 57.149 32.000 0.00 0.00 29.69 0.98
447 588 6.751514 TCATGGTTGCACGAAACTATTATT 57.248 33.333 0.00 0.00 29.69 1.40
448 589 6.542005 TCATCATGGTTGCACGAAACTATTAT 59.458 34.615 0.00 0.00 29.69 1.28
449 590 5.877564 TCATCATGGTTGCACGAAACTATTA 59.122 36.000 0.00 0.00 29.69 0.98
633 796 6.314896 CCAACTGAAGCTAGGAAAAGATACTG 59.685 42.308 0.00 0.00 0.00 2.74
634 797 6.213600 TCCAACTGAAGCTAGGAAAAGATACT 59.786 38.462 0.00 0.00 0.00 2.12
635 798 6.314152 GTCCAACTGAAGCTAGGAAAAGATAC 59.686 42.308 0.00 0.00 0.00 2.24
636 799 6.407202 GTCCAACTGAAGCTAGGAAAAGATA 58.593 40.000 0.00 0.00 0.00 1.98
637 800 5.249420 GTCCAACTGAAGCTAGGAAAAGAT 58.751 41.667 0.00 0.00 0.00 2.40
644 807 0.608640 ACCGTCCAACTGAAGCTAGG 59.391 55.000 0.00 0.00 0.00 3.02
692 855 2.512515 GTCAGCGGATGGAGCACC 60.513 66.667 0.00 0.00 37.01 5.01
693 856 1.812922 CTGTCAGCGGATGGAGCAC 60.813 63.158 0.00 0.00 37.01 4.40
708 871 1.867233 GACGTGCAGAACATTCACTGT 59.133 47.619 0.00 0.00 40.84 3.55
751 914 8.567285 TCTTCTTTTTAGATGGATGGAAGAAC 57.433 34.615 0.00 0.00 36.21 3.01
758 921 7.228308 GGGATCACTCTTCTTTTTAGATGGATG 59.772 40.741 0.00 0.00 0.00 3.51
759 922 7.128573 AGGGATCACTCTTCTTTTTAGATGGAT 59.871 37.037 0.00 0.00 0.00 3.41
776 971 2.581354 GCACGAGCAGGGATCACT 59.419 61.111 0.00 0.00 41.58 3.41
907 1345 3.186409 GCGAACTGTGCTCTTTTGTATGA 59.814 43.478 0.00 0.00 0.00 2.15
909 1347 2.157668 CGCGAACTGTGCTCTTTTGTAT 59.842 45.455 0.00 0.00 0.00 2.29
961 1399 6.823689 GGAGATGGTATAAAGCAAAGTTGAGA 59.176 38.462 0.00 0.00 36.53 3.27
968 1406 5.815581 ACACAGGAGATGGTATAAAGCAAA 58.184 37.500 0.00 0.00 36.53 3.68
972 1410 5.923114 CGATGACACAGGAGATGGTATAAAG 59.077 44.000 0.00 0.00 0.00 1.85
979 1417 1.202463 GGACGATGACACAGGAGATGG 60.202 57.143 0.00 0.00 0.00 3.51
980 1418 1.478105 TGGACGATGACACAGGAGATG 59.522 52.381 0.00 0.00 0.00 2.90
982 1420 1.478105 CATGGACGATGACACAGGAGA 59.522 52.381 0.00 0.00 33.31 3.71
984 1422 0.536724 CCATGGACGATGACACAGGA 59.463 55.000 5.56 0.00 33.31 3.86
985 1423 1.091771 GCCATGGACGATGACACAGG 61.092 60.000 18.40 0.00 33.31 4.00
988 1426 1.153647 TCGCCATGGACGATGACAC 60.154 57.895 22.05 0.00 33.96 3.67
989 1427 3.293702 TCGCCATGGACGATGACA 58.706 55.556 22.05 5.32 33.96 3.58
1172 1615 4.816984 TCCTCTCGTCCTCCGCCC 62.817 72.222 0.00 0.00 36.19 6.13
1333 1776 4.300803 GCTATACGAGACGAGAGAGAGAA 58.699 47.826 0.00 0.00 0.00 2.87
1334 1777 3.305539 GGCTATACGAGACGAGAGAGAGA 60.306 52.174 0.00 0.00 0.00 3.10
1370 1813 8.555361 GGAAGATGAACTGATAACTGAAATAGC 58.445 37.037 0.00 0.00 0.00 2.97
1385 1828 7.383687 TGTTCTTATTGTACGGAAGATGAACT 58.616 34.615 14.71 0.00 34.62 3.01
1390 1833 7.861372 CGTAGATGTTCTTATTGTACGGAAGAT 59.139 37.037 5.15 0.00 0.00 2.40
1397 1840 8.592998 CAGGAAACGTAGATGTTCTTATTGTAC 58.407 37.037 0.00 0.00 0.00 2.90
1411 1855 6.988622 TTTGAGTTTTTCAGGAAACGTAGA 57.011 33.333 0.00 0.00 42.78 2.59
1414 1858 5.184287 TCCTTTTGAGTTTTTCAGGAAACGT 59.816 36.000 0.00 0.00 42.78 3.99
1477 1921 5.034200 TCCACCCCTACTTTTGCTCTAATA 58.966 41.667 0.00 0.00 0.00 0.98
1478 1922 3.850173 TCCACCCCTACTTTTGCTCTAAT 59.150 43.478 0.00 0.00 0.00 1.73
1480 1924 2.570302 GTCCACCCCTACTTTTGCTCTA 59.430 50.000 0.00 0.00 0.00 2.43
1485 1929 2.668144 TTGGTCCACCCCTACTTTTG 57.332 50.000 0.00 0.00 34.29 2.44
1514 1958 7.172190 ACTTCTCATGGCAATTTACAGATATCG 59.828 37.037 0.00 0.00 0.00 2.92
1516 1960 7.994911 TCACTTCTCATGGCAATTTACAGATAT 59.005 33.333 0.00 0.00 0.00 1.63
1562 2006 6.315393 TCGCTTTTAAGTTTCAGACTTTCAGT 59.685 34.615 0.00 0.00 46.34 3.41
1566 2010 8.926715 AAATTCGCTTTTAAGTTTCAGACTTT 57.073 26.923 0.00 0.00 46.34 2.66
1569 2013 8.335256 TGAAAATTCGCTTTTAAGTTTCAGAC 57.665 30.769 7.19 0.00 42.56 3.51
1570 2014 8.918961 TTGAAAATTCGCTTTTAAGTTTCAGA 57.081 26.923 10.18 2.49 45.76 3.27
1580 2024 9.896263 ATTGCAAAATATTGAAAATTCGCTTTT 57.104 22.222 1.71 0.00 37.62 2.27
1585 2029 8.658609 ACTCCATTGCAAAATATTGAAAATTCG 58.341 29.630 1.71 0.00 37.62 3.34
1593 2037 8.984891 TGACTAAACTCCATTGCAAAATATTG 57.015 30.769 1.71 0.00 39.65 1.90
1601 2045 6.538742 GCTAGTAATGACTAAACTCCATTGCA 59.461 38.462 0.00 0.00 37.72 4.08
1605 2049 9.167311 CTTTTGCTAGTAATGACTAAACTCCAT 57.833 33.333 0.00 0.00 37.72 3.41
1608 2052 7.414208 GCCCTTTTGCTAGTAATGACTAAACTC 60.414 40.741 0.00 0.00 37.72 3.01
1615 2059 2.354821 CGGCCCTTTTGCTAGTAATGAC 59.645 50.000 0.00 0.00 0.00 3.06
1616 2060 2.639065 CGGCCCTTTTGCTAGTAATGA 58.361 47.619 0.00 0.00 0.00 2.57
1636 2080 3.730761 CTCCTGCTGCAACGCACC 61.731 66.667 3.02 0.00 35.74 5.01
1795 2310 9.959775 GTGTTCACGAATTTGAAAAATGTTTAA 57.040 25.926 0.00 0.00 37.24 1.52
1943 2532 4.415881 AAAACTGTTCCACCAATTTCCC 57.584 40.909 0.00 0.00 0.00 3.97
2116 2721 8.180267 TGAACAAAATGTCGCAAATTCAATTTT 58.820 25.926 0.00 0.00 0.00 1.82
2117 2722 7.692088 TGAACAAAATGTCGCAAATTCAATTT 58.308 26.923 0.00 0.00 0.00 1.82
2118 2723 7.244166 TGAACAAAATGTCGCAAATTCAATT 57.756 28.000 0.00 0.00 0.00 2.32
2119 2724 6.841443 TGAACAAAATGTCGCAAATTCAAT 57.159 29.167 0.00 0.00 0.00 2.57
2200 2817 9.971922 TCAAAATTTTGAAAACAAATGTTTGGT 57.028 22.222 27.22 0.22 42.61 3.67
2464 3127 3.729965 CTCTGCGCGCTGGGAGAAT 62.730 63.158 31.42 0.00 0.00 2.40
2520 3183 1.299648 CACAGGGGAATCCTTCGCA 59.700 57.895 0.00 0.00 45.47 5.10
2616 3282 3.542969 AAGGGGCTATTGTTTCTGGTT 57.457 42.857 0.00 0.00 0.00 3.67
2617 3283 3.542969 AAAGGGGCTATTGTTTCTGGT 57.457 42.857 0.00 0.00 0.00 4.00
2618 3284 7.839680 ATAATAAAGGGGCTATTGTTTCTGG 57.160 36.000 0.00 0.00 0.00 3.86
2658 3327 7.147408 GGGTGAATCTGGCATCCTTATATCTAT 60.147 40.741 0.00 0.00 33.65 1.98
2676 3345 2.690734 GGGGGAGTGGGGGTGAATC 61.691 68.421 0.00 0.00 0.00 2.52
2681 3350 2.021652 TTTTTGGGGGAGTGGGGGT 61.022 57.895 0.00 0.00 0.00 4.95
2737 3406 9.875675 CTATGGTAGTAAGTAGACGTATGAAAC 57.124 37.037 0.00 0.00 0.00 2.78
2740 3409 8.646004 ACTCTATGGTAGTAAGTAGACGTATGA 58.354 37.037 0.00 0.00 0.00 2.15
2741 3410 8.830201 ACTCTATGGTAGTAAGTAGACGTATG 57.170 38.462 0.00 0.00 0.00 2.39
2742 3411 9.844257 AAACTCTATGGTAGTAAGTAGACGTAT 57.156 33.333 0.00 0.00 0.00 3.06
2743 3412 9.672673 AAAACTCTATGGTAGTAAGTAGACGTA 57.327 33.333 0.00 0.00 0.00 3.57
2744 3413 8.572855 AAAACTCTATGGTAGTAAGTAGACGT 57.427 34.615 0.00 0.00 0.00 4.34
2750 3419 8.968969 CACCTCTAAAACTCTATGGTAGTAAGT 58.031 37.037 0.00 0.00 0.00 2.24
2757 3439 7.496346 TTGATCACCTCTAAAACTCTATGGT 57.504 36.000 0.00 0.00 0.00 3.55
2769 3451 8.602424 TGTCCTTTTTCTAATTGATCACCTCTA 58.398 33.333 0.00 0.00 0.00 2.43
2772 3454 9.753674 TTATGTCCTTTTTCTAATTGATCACCT 57.246 29.630 0.00 0.00 0.00 4.00
2786 3468 9.528489 TCCTAACAGCTTAATTATGTCCTTTTT 57.472 29.630 0.00 0.00 0.00 1.94
2803 3485 9.646427 CAACTAAGGATATATTCTCCTAACAGC 57.354 37.037 6.90 0.00 42.42 4.40
2854 3616 8.994170 TGACAATGATTTAATGAGTTTGTACGA 58.006 29.630 0.00 0.00 0.00 3.43
2874 3636 9.677567 GTTCAAACTATGTGTACAAATGACAAT 57.322 29.630 8.91 0.00 0.00 2.71
2896 3658 8.635765 AGCAAGAATAAAAAGTATCCAGTTCA 57.364 30.769 0.00 0.00 0.00 3.18
2898 3660 9.740710 ACTAGCAAGAATAAAAAGTATCCAGTT 57.259 29.630 0.00 0.00 0.00 3.16
2899 3661 9.384764 GACTAGCAAGAATAAAAAGTATCCAGT 57.615 33.333 0.00 0.00 0.00 4.00
2900 3662 9.383519 TGACTAGCAAGAATAAAAAGTATCCAG 57.616 33.333 0.00 0.00 0.00 3.86
2901 3663 9.905713 ATGACTAGCAAGAATAAAAAGTATCCA 57.094 29.630 0.00 0.00 0.00 3.41
2912 3691 7.877612 TGACAAAGTCAATGACTAGCAAGAATA 59.122 33.333 17.04 0.00 42.59 1.75
2921 3700 4.650734 TGCCATGACAAAGTCAATGACTA 58.349 39.130 17.04 0.34 45.96 2.59
2927 3706 7.701539 ACTATATTTGCCATGACAAAGTCAA 57.298 32.000 12.80 0.00 45.96 3.18
2931 3710 7.099266 TCCAACTATATTTGCCATGACAAAG 57.901 36.000 12.80 1.86 42.45 2.77
2968 3747 8.946085 CACACCATATGTTTCTAGCTTTAGAAA 58.054 33.333 7.46 7.46 40.64 2.52
2969 3748 8.100791 ACACACCATATGTTTCTAGCTTTAGAA 58.899 33.333 1.24 0.00 40.64 2.10
2973 3752 5.648092 GGACACACCATATGTTTCTAGCTTT 59.352 40.000 1.24 0.00 40.64 3.51
3013 3796 4.025040 TGATCAATGTGAAGAACCAGCT 57.975 40.909 0.00 0.00 0.00 4.24
3028 3811 8.504815 CATGCAAACAAACCAAAATATGATCAA 58.495 29.630 0.00 0.00 0.00 2.57
3033 3816 7.187244 TGTCATGCAAACAAACCAAAATATG 57.813 32.000 3.01 0.00 0.00 1.78
3071 3855 6.126681 ACACAGATCATGAGAATAATCCCACA 60.127 38.462 0.09 0.00 0.00 4.17
3074 3858 8.778358 GTTAACACAGATCATGAGAATAATCCC 58.222 37.037 0.09 0.00 0.00 3.85
3087 3871 8.084985 TGTGGGATATTAGTTAACACAGATCA 57.915 34.615 8.61 0.00 33.03 2.92
3116 3915 5.935206 TCGGTGATTAAGTTTGAATAGCACA 59.065 36.000 0.00 0.00 0.00 4.57
3117 3916 6.417191 TCGGTGATTAAGTTTGAATAGCAC 57.583 37.500 0.00 0.00 0.00 4.40
3138 3937 6.604930 ACGTTGGTAAAATTAAGATGGTTCG 58.395 36.000 0.00 0.00 0.00 3.95
3145 3946 6.454795 AGTACCGACGTTGGTAAAATTAAGA 58.545 36.000 31.84 10.01 45.72 2.10
3196 5155 9.166173 CAGTATGAAGGAAGAATAAACATGTCA 57.834 33.333 0.00 0.00 39.69 3.58
3197 5156 9.167311 ACAGTATGAAGGAAGAATAAACATGTC 57.833 33.333 0.00 0.00 39.69 3.06
3202 5161 8.884726 GGAAGACAGTATGAAGGAAGAATAAAC 58.115 37.037 0.00 0.00 39.69 2.01
3208 5167 5.544176 ACAAGGAAGACAGTATGAAGGAAGA 59.456 40.000 0.00 0.00 39.69 2.87
3210 5169 5.071788 ACACAAGGAAGACAGTATGAAGGAA 59.928 40.000 0.00 0.00 39.69 3.36
3222 5181 1.334869 CCTGCACAACACAAGGAAGAC 59.665 52.381 0.00 0.00 0.00 3.01
3223 5182 1.211703 TCCTGCACAACACAAGGAAGA 59.788 47.619 0.00 0.00 0.00 2.87
3228 5190 2.620115 AGAACATCCTGCACAACACAAG 59.380 45.455 0.00 0.00 0.00 3.16
3260 5222 1.855513 CAAACAATGCATATGGGCCG 58.144 50.000 0.00 0.00 0.00 6.13
3284 5246 2.926778 ATGCCCTACTTGCATCTCTC 57.073 50.000 0.00 0.00 46.04 3.20
3338 5300 2.489971 CCTAAGCCTGAAACGTCACAA 58.510 47.619 0.00 0.00 0.00 3.33
3339 5301 1.876416 GCCTAAGCCTGAAACGTCACA 60.876 52.381 0.00 0.00 0.00 3.58
3395 5357 5.999205 TCACATACTTGCCCATGAATTTT 57.001 34.783 0.00 0.00 0.00 1.82
3455 5417 0.179137 CGTGCGCTCTACCATCTTCA 60.179 55.000 9.73 0.00 0.00 3.02
3473 5435 3.446873 AGCCTATTCCAGATATCTCAGCG 59.553 47.826 1.03 0.00 0.00 5.18
3490 5452 6.794374 TGTATTACATTTACGTCGAAGCCTA 58.206 36.000 0.00 0.00 0.00 3.93
3533 5495 5.414144 AGTTTCAGCTCTATTTTCTTCTGGC 59.586 40.000 0.00 0.00 0.00 4.85
3566 5528 2.684881 CTCCATTGCACTTACATGACCC 59.315 50.000 0.00 0.00 0.00 4.46
3620 5582 6.095860 CCACTTCATCTTCATGGATGCTTTTA 59.904 38.462 6.99 0.00 41.83 1.52
3649 5611 1.000955 CACCACACGTTTCCTCTAGCT 59.999 52.381 0.00 0.00 0.00 3.32
3652 5614 0.753867 TGCACCACACGTTTCCTCTA 59.246 50.000 0.00 0.00 0.00 2.43
3663 5625 3.568007 GTGTTCCTTAAATCTGCACCACA 59.432 43.478 0.00 0.00 0.00 4.17
3664 5626 3.568007 TGTGTTCCTTAAATCTGCACCAC 59.432 43.478 0.00 0.00 0.00 4.16
3691 5653 1.000359 TCTCCTCCATCGCCAGTGA 60.000 57.895 0.00 0.00 0.00 3.41
3714 5676 2.663196 CTTCTCCCCGGCGTCTTT 59.337 61.111 6.01 0.00 0.00 2.52
3746 5708 3.832490 TGCTACTGTTCACATCTACACCT 59.168 43.478 0.00 0.00 0.00 4.00
3748 5710 5.060662 TCTGCTACTGTTCACATCTACAC 57.939 43.478 0.00 0.00 0.00 2.90
3762 5724 1.002087 CCTTCACGGGTTTCTGCTACT 59.998 52.381 0.00 0.00 0.00 2.57
3775 5737 1.293924 GATCCTCATGCACCTTCACG 58.706 55.000 0.00 0.00 0.00 4.35
3787 5749 0.537188 GACGCTTCCCTTGATCCTCA 59.463 55.000 0.00 0.00 0.00 3.86
3811 5773 8.415950 TGGATGTTTGTATTGTTCTAACCAAT 57.584 30.769 0.00 0.00 0.00 3.16
3847 5809 5.147032 TGATGTTTCCTTTGGTTTCTCCAT 58.853 37.500 0.00 0.00 46.60 3.41
3857 5819 7.337689 TCACCTCAATATCTGATGTTTCCTTTG 59.662 37.037 0.00 0.00 31.19 2.77
3919 5881 7.988028 GTCCTTCTTAAATAGGCACAACTCTAT 59.012 37.037 0.00 0.00 0.00 1.98
3945 5907 8.824781 AGAAACATGAAGAATCAATCATCTACG 58.175 33.333 0.00 0.00 39.49 3.51
3954 6016 7.764141 TTGGATCAGAAACATGAAGAATCAA 57.236 32.000 0.00 0.00 39.49 2.57
4014 6076 7.066645 TCTCATTTATTTCATTGCAGAGTGAGG 59.933 37.037 0.00 0.00 31.62 3.86
4094 6156 8.755028 TGCATAGAAGTTCTTTACCATGTAGTA 58.245 33.333 11.40 0.00 0.00 1.82
4125 6187 3.834489 TGTTTTTGCCATCACAACCAT 57.166 38.095 0.00 0.00 0.00 3.55
4184 6246 3.622166 TGTGCCTACCCTTTTAGTAGC 57.378 47.619 0.00 0.00 36.65 3.58
4259 6325 4.166246 AGATGCATCCATGTGTTCAGAT 57.834 40.909 23.06 0.00 0.00 2.90
4261 6327 5.587443 TCTTTAGATGCATCCATGTGTTCAG 59.413 40.000 23.06 6.72 0.00 3.02
4321 6387 5.386958 TCTATGTTCGCTACTCACAAAGT 57.613 39.130 0.00 0.00 42.33 2.66
4340 6406 6.465948 TGTACGAAATAACTTTTGCCCTCTA 58.534 36.000 0.00 0.00 29.99 2.43
4342 6408 5.616488 TGTACGAAATAACTTTTGCCCTC 57.384 39.130 0.00 0.00 29.99 4.30
4359 6425 6.909909 TCTTAGCATCCACATAGTATGTACG 58.090 40.000 15.38 8.96 42.70 3.67
4418 6484 5.006552 ACAATTATTTGTGTGTTGTTGCTGC 59.993 36.000 2.28 0.00 44.36 5.25
4422 6488 7.594758 CCTCCTACAATTATTTGTGTGTTGTTG 59.405 37.037 12.20 0.00 45.56 3.33
4425 6491 6.092748 GCCTCCTACAATTATTTGTGTGTTG 58.907 40.000 12.20 1.63 45.56 3.33
4426 6492 5.772672 TGCCTCCTACAATTATTTGTGTGTT 59.227 36.000 12.20 0.00 45.56 3.32
4427 6493 5.321102 TGCCTCCTACAATTATTTGTGTGT 58.679 37.500 12.20 0.00 45.56 3.72
4428 6494 5.415701 ACTGCCTCCTACAATTATTTGTGTG 59.584 40.000 12.20 6.00 45.56 3.82
4429 6495 5.570320 ACTGCCTCCTACAATTATTTGTGT 58.430 37.500 12.20 0.00 45.56 3.72
4430 6496 7.807977 ATACTGCCTCCTACAATTATTTGTG 57.192 36.000 12.20 3.96 45.56 3.33
4432 6498 9.561069 ACTTATACTGCCTCCTACAATTATTTG 57.439 33.333 0.00 0.00 38.86 2.32
4450 6519 9.601217 AATTTGTCGCAGAAATCTACTTATACT 57.399 29.630 0.00 0.00 39.69 2.12
4467 6536 4.161333 CAATGAGGTGAAGAATTTGTCGC 58.839 43.478 0.00 0.00 0.00 5.19
4468 6537 4.379813 CCCAATGAGGTGAAGAATTTGTCG 60.380 45.833 0.00 0.00 34.66 4.35
4471 6540 5.927281 ATCCCAATGAGGTGAAGAATTTG 57.073 39.130 0.00 0.00 34.66 2.32
4476 6545 5.512942 TTTGTATCCCAATGAGGTGAAGA 57.487 39.130 0.00 0.00 34.66 2.87
4479 6548 5.825532 TCAATTTGTATCCCAATGAGGTGA 58.174 37.500 0.00 0.00 34.66 4.02
4485 6554 6.982141 CACAATCCTCAATTTGTATCCCAATG 59.018 38.462 0.00 0.00 31.81 2.82
4486 6555 6.407299 GCACAATCCTCAATTTGTATCCCAAT 60.407 38.462 0.00 0.00 31.81 3.16
4490 6559 5.581126 TGCACAATCCTCAATTTGTATCC 57.419 39.130 0.00 0.00 0.00 2.59
4491 6560 7.092716 AGTTTGCACAATCCTCAATTTGTATC 58.907 34.615 0.00 0.00 0.00 2.24
4522 6591 5.453339 GCATGGTTATCTAGTTCTGCTACCA 60.453 44.000 0.00 0.00 0.00 3.25
4523 6592 4.991687 GCATGGTTATCTAGTTCTGCTACC 59.008 45.833 0.00 0.00 0.00 3.18
4533 6602 3.045601 CGAAGGGGCATGGTTATCTAG 57.954 52.381 0.00 0.00 0.00 2.43
4549 6618 0.385390 ACAAAGCAAGCAACCCGAAG 59.615 50.000 0.00 0.00 0.00 3.79
4572 6645 2.031682 GCTTGATGTTCTCGTGTGCTTT 60.032 45.455 0.00 0.00 0.00 3.51
4592 6665 5.474532 TGAAGGGCATTACATTATCAGATGC 59.525 40.000 0.00 0.00 41.67 3.91
4593 6666 6.347969 CGTGAAGGGCATTACATTATCAGATG 60.348 42.308 0.00 0.00 0.00 2.90
4594 6667 5.702670 CGTGAAGGGCATTACATTATCAGAT 59.297 40.000 0.00 0.00 0.00 2.90
4595 6668 5.056480 CGTGAAGGGCATTACATTATCAGA 58.944 41.667 0.00 0.00 0.00 3.27
4596 6669 4.319766 GCGTGAAGGGCATTACATTATCAG 60.320 45.833 0.00 0.00 0.00 2.90
4597 6670 3.563808 GCGTGAAGGGCATTACATTATCA 59.436 43.478 0.00 0.00 0.00 2.15
4598 6671 3.563808 TGCGTGAAGGGCATTACATTATC 59.436 43.478 0.00 0.00 35.04 1.75
4599 6672 3.550820 TGCGTGAAGGGCATTACATTAT 58.449 40.909 0.00 0.00 35.04 1.28
4600 6673 2.992593 TGCGTGAAGGGCATTACATTA 58.007 42.857 0.00 0.00 35.04 1.90
4601 6674 1.832883 TGCGTGAAGGGCATTACATT 58.167 45.000 0.00 0.00 35.04 2.71
4602 6675 3.568000 TGCGTGAAGGGCATTACAT 57.432 47.368 0.00 0.00 35.04 2.29
4608 6681 0.955428 GAACTGATGCGTGAAGGGCA 60.955 55.000 0.00 0.00 45.71 5.36
4609 6682 0.674895 AGAACTGATGCGTGAAGGGC 60.675 55.000 0.00 0.00 0.00 5.19
4610 6683 1.081892 CAGAACTGATGCGTGAAGGG 58.918 55.000 0.00 0.00 0.00 3.95
4611 6684 1.081892 CCAGAACTGATGCGTGAAGG 58.918 55.000 3.19 0.00 0.00 3.46
4612 6685 1.800805 ACCAGAACTGATGCGTGAAG 58.199 50.000 3.19 0.00 0.00 3.02
4613 6686 2.143122 GAACCAGAACTGATGCGTGAA 58.857 47.619 3.19 0.00 0.00 3.18
4614 6687 1.608025 GGAACCAGAACTGATGCGTGA 60.608 52.381 3.19 0.00 0.00 4.35
4615 6688 0.798776 GGAACCAGAACTGATGCGTG 59.201 55.000 3.19 0.00 0.00 5.34
4616 6689 0.687354 AGGAACCAGAACTGATGCGT 59.313 50.000 3.19 0.00 0.00 5.24
4617 6690 1.081892 CAGGAACCAGAACTGATGCG 58.918 55.000 3.19 0.00 34.21 4.73
4618 6691 0.807496 GCAGGAACCAGAACTGATGC 59.193 55.000 3.19 2.71 34.21 3.91
4619 6692 1.808945 GTGCAGGAACCAGAACTGATG 59.191 52.381 3.19 0.00 34.21 3.07
4620 6693 1.271597 GGTGCAGGAACCAGAACTGAT 60.272 52.381 3.19 0.00 40.22 2.90
4621 6694 0.108585 GGTGCAGGAACCAGAACTGA 59.891 55.000 3.19 0.00 40.22 3.41
4622 6695 0.109342 AGGTGCAGGAACCAGAACTG 59.891 55.000 0.00 0.00 43.20 3.16
4623 6696 0.109342 CAGGTGCAGGAACCAGAACT 59.891 55.000 0.00 0.00 43.20 3.01
4624 6697 0.108585 TCAGGTGCAGGAACCAGAAC 59.891 55.000 0.00 0.00 43.20 3.01
4625 6698 0.397941 CTCAGGTGCAGGAACCAGAA 59.602 55.000 0.00 0.00 43.20 3.02
4626 6699 0.764369 ACTCAGGTGCAGGAACCAGA 60.764 55.000 0.00 0.00 43.20 3.86
4627 6700 0.604780 CACTCAGGTGCAGGAACCAG 60.605 60.000 0.00 0.00 43.20 4.00
4628 6701 1.053835 TCACTCAGGTGCAGGAACCA 61.054 55.000 0.00 0.00 43.20 3.67
4629 6702 0.326264 ATCACTCAGGTGCAGGAACC 59.674 55.000 0.00 0.00 42.72 3.62
4630 6703 1.271054 ACATCACTCAGGTGCAGGAAC 60.271 52.381 0.00 0.00 42.72 3.62
4631 6704 1.059098 ACATCACTCAGGTGCAGGAA 58.941 50.000 0.00 0.00 42.72 3.36
4632 6705 1.059098 AACATCACTCAGGTGCAGGA 58.941 50.000 0.00 0.00 42.72 3.86
4633 6706 1.162698 CAACATCACTCAGGTGCAGG 58.837 55.000 0.00 0.00 42.72 4.85
4634 6707 0.520404 GCAACATCACTCAGGTGCAG 59.480 55.000 0.00 0.00 42.72 4.41
4635 6708 0.890542 GGCAACATCACTCAGGTGCA 60.891 55.000 4.76 0.00 42.72 4.57
4636 6709 1.589716 GGGCAACATCACTCAGGTGC 61.590 60.000 0.00 0.00 40.22 5.01
4637 6710 0.037303 AGGGCAACATCACTCAGGTG 59.963 55.000 0.00 0.00 41.25 4.00
4638 6711 0.773644 AAGGGCAACATCACTCAGGT 59.226 50.000 0.00 0.00 39.74 4.00
4639 6712 1.171308 CAAGGGCAACATCACTCAGG 58.829 55.000 0.00 0.00 39.74 3.86
4640 6713 1.171308 CCAAGGGCAACATCACTCAG 58.829 55.000 0.00 0.00 39.74 3.35
4641 6714 3.344703 CCAAGGGCAACATCACTCA 57.655 52.632 0.00 0.00 39.74 3.41
4653 6726 1.077429 GGAGCAAGTAGGCCAAGGG 60.077 63.158 5.01 0.00 0.00 3.95
4654 6727 0.393537 CAGGAGCAAGTAGGCCAAGG 60.394 60.000 5.01 0.00 0.00 3.61
4655 6728 0.393537 CCAGGAGCAAGTAGGCCAAG 60.394 60.000 5.01 0.00 0.00 3.61
4656 6729 0.840288 TCCAGGAGCAAGTAGGCCAA 60.840 55.000 5.01 0.00 0.00 4.52
4657 6730 1.229496 TCCAGGAGCAAGTAGGCCA 60.229 57.895 5.01 0.00 0.00 5.36
4658 6731 1.222113 GTCCAGGAGCAAGTAGGCC 59.778 63.158 0.00 0.00 0.00 5.19
4659 6732 1.222113 GGTCCAGGAGCAAGTAGGC 59.778 63.158 14.20 0.00 0.00 3.93
4660 6733 1.517832 CGGTCCAGGAGCAAGTAGG 59.482 63.158 18.91 0.00 0.00 3.18
4661 6734 0.970937 TCCGGTCCAGGAGCAAGTAG 60.971 60.000 18.91 1.61 34.92 2.57
4662 6735 1.077805 TCCGGTCCAGGAGCAAGTA 59.922 57.895 18.91 0.00 34.92 2.24
4663 6736 2.203788 TCCGGTCCAGGAGCAAGT 60.204 61.111 18.91 0.00 34.92 3.16
4664 6737 2.266055 GTCCGGTCCAGGAGCAAG 59.734 66.667 18.91 9.21 41.68 4.01
4665 6738 3.691342 CGTCCGGTCCAGGAGCAA 61.691 66.667 18.91 3.05 41.68 3.91
4666 6739 3.957435 ATCGTCCGGTCCAGGAGCA 62.957 63.158 18.91 0.00 41.68 4.26
4667 6740 3.140225 GATCGTCCGGTCCAGGAGC 62.140 68.421 8.79 8.79 41.68 4.70
4668 6741 0.179026 TAGATCGTCCGGTCCAGGAG 60.179 60.000 0.00 0.00 41.68 3.69
4669 6742 0.179026 CTAGATCGTCCGGTCCAGGA 60.179 60.000 0.00 0.00 38.11 3.86
4670 6743 1.797211 GCTAGATCGTCCGGTCCAGG 61.797 65.000 0.00 0.00 0.00 4.45
4671 6744 1.655329 GCTAGATCGTCCGGTCCAG 59.345 63.158 0.00 0.00 0.00 3.86
4672 6745 2.184830 CGCTAGATCGTCCGGTCCA 61.185 63.158 0.00 0.00 0.00 4.02
4673 6746 1.843734 CTCGCTAGATCGTCCGGTCC 61.844 65.000 0.00 0.00 0.00 4.46
4674 6747 1.570475 CTCGCTAGATCGTCCGGTC 59.430 63.158 0.00 0.00 0.00 4.79
4675 6748 1.892862 CCTCGCTAGATCGTCCGGT 60.893 63.158 0.00 0.00 0.00 5.28
4676 6749 2.618219 CCCTCGCTAGATCGTCCGG 61.618 68.421 0.00 0.00 0.00 5.14
4677 6750 1.597302 TCCCTCGCTAGATCGTCCG 60.597 63.158 0.00 0.00 0.00 4.79
4678 6751 0.535553 AGTCCCTCGCTAGATCGTCC 60.536 60.000 0.00 0.00 0.00 4.79
4679 6752 0.589223 CAGTCCCTCGCTAGATCGTC 59.411 60.000 0.00 0.00 0.00 4.20
4680 6753 0.820074 CCAGTCCCTCGCTAGATCGT 60.820 60.000 0.00 0.00 0.00 3.73
4681 6754 0.820074 ACCAGTCCCTCGCTAGATCG 60.820 60.000 0.00 0.00 0.00 3.69
4682 6755 0.671251 CACCAGTCCCTCGCTAGATC 59.329 60.000 0.00 0.00 0.00 2.75
4683 6756 0.757188 CCACCAGTCCCTCGCTAGAT 60.757 60.000 0.00 0.00 0.00 1.98
4684 6757 1.379977 CCACCAGTCCCTCGCTAGA 60.380 63.158 0.00 0.00 0.00 2.43
4685 6758 1.682684 ACCACCAGTCCCTCGCTAG 60.683 63.158 0.00 0.00 0.00 3.42
4686 6759 1.982395 CACCACCAGTCCCTCGCTA 60.982 63.158 0.00 0.00 0.00 4.26
4687 6760 3.314331 CACCACCAGTCCCTCGCT 61.314 66.667 0.00 0.00 0.00 4.93
4689 6762 3.302347 GAGCACCACCAGTCCCTCG 62.302 68.421 0.00 0.00 0.00 4.63
4690 6763 2.665603 GAGCACCACCAGTCCCTC 59.334 66.667 0.00 0.00 0.00 4.30
4691 6764 2.930562 GGAGCACCACCAGTCCCT 60.931 66.667 0.00 0.00 35.97 4.20
4692 6765 3.249189 TGGAGCACCACCAGTCCC 61.249 66.667 0.00 0.00 41.77 4.46
4701 6774 1.673168 CCTGCTAAGAATGGAGCACC 58.327 55.000 0.00 0.00 43.64 5.01
4702 6775 1.020437 GCCTGCTAAGAATGGAGCAC 58.980 55.000 0.00 0.00 43.64 4.40
4703 6776 0.914644 AGCCTGCTAAGAATGGAGCA 59.085 50.000 0.00 0.00 46.24 4.26
4704 6777 1.307097 CAGCCTGCTAAGAATGGAGC 58.693 55.000 0.00 0.00 39.25 4.70
4705 6778 1.307097 GCAGCCTGCTAAGAATGGAG 58.693 55.000 10.04 0.00 40.96 3.86
4706 6779 0.107017 GGCAGCCTGCTAAGAATGGA 60.107 55.000 17.55 0.00 44.28 3.41
4707 6780 1.442526 CGGCAGCCTGCTAAGAATGG 61.443 60.000 17.55 0.00 44.28 3.16
4708 6781 1.442526 CCGGCAGCCTGCTAAGAATG 61.443 60.000 17.55 0.00 44.28 2.67
4709 6782 1.153086 CCGGCAGCCTGCTAAGAAT 60.153 57.895 17.55 0.00 44.28 2.40
4710 6783 2.268920 CCGGCAGCCTGCTAAGAA 59.731 61.111 17.55 0.00 44.28 2.52
4711 6784 4.473520 GCCGGCAGCCTGCTAAGA 62.474 66.667 24.80 0.00 44.28 2.10
4720 6793 3.683587 GATTTTGGTCGCCGGCAGC 62.684 63.158 28.98 22.24 38.52 5.25
4721 6794 2.040544 AGATTTTGGTCGCCGGCAG 61.041 57.895 28.98 19.33 0.00 4.85
4722 6795 2.033448 AGATTTTGGTCGCCGGCA 59.967 55.556 28.98 11.20 0.00 5.69
4723 6796 1.982073 CTCAGATTTTGGTCGCCGGC 61.982 60.000 19.07 19.07 0.00 6.13
4724 6797 0.391130 TCTCAGATTTTGGTCGCCGG 60.391 55.000 0.00 0.00 0.00 6.13
4725 6798 1.394917 CTTCTCAGATTTTGGTCGCCG 59.605 52.381 0.00 0.00 0.00 6.46
4726 6799 1.131315 GCTTCTCAGATTTTGGTCGCC 59.869 52.381 0.00 0.00 0.00 5.54
4727 6800 1.201965 CGCTTCTCAGATTTTGGTCGC 60.202 52.381 0.00 0.00 0.00 5.19
4728 6801 2.069273 ACGCTTCTCAGATTTTGGTCG 58.931 47.619 0.00 0.00 0.00 4.79
4729 6802 2.092838 CGACGCTTCTCAGATTTTGGTC 59.907 50.000 0.00 0.00 0.00 4.02
4730 6803 2.069273 CGACGCTTCTCAGATTTTGGT 58.931 47.619 0.00 0.00 0.00 3.67
4731 6804 2.092838 GTCGACGCTTCTCAGATTTTGG 59.907 50.000 0.00 0.00 0.00 3.28
4732 6805 2.222376 CGTCGACGCTTCTCAGATTTTG 60.222 50.000 26.59 0.00 0.00 2.44
4733 6806 1.986378 CGTCGACGCTTCTCAGATTTT 59.014 47.619 26.59 0.00 0.00 1.82
4734 6807 1.199327 TCGTCGACGCTTCTCAGATTT 59.801 47.619 32.19 0.00 39.60 2.17
4735 6808 0.803117 TCGTCGACGCTTCTCAGATT 59.197 50.000 32.19 0.00 39.60 2.40
4736 6809 1.018148 ATCGTCGACGCTTCTCAGAT 58.982 50.000 32.19 15.32 39.60 2.90
4737 6810 0.803117 AATCGTCGACGCTTCTCAGA 59.197 50.000 32.19 13.58 39.60 3.27
4738 6811 2.453650 TAATCGTCGACGCTTCTCAG 57.546 50.000 32.19 4.71 39.60 3.35
4739 6812 2.599142 CGATAATCGTCGACGCTTCTCA 60.599 50.000 32.19 14.93 44.06 3.27
4740 6813 1.963883 CGATAATCGTCGACGCTTCTC 59.036 52.381 32.19 26.43 44.06 2.87
4741 6814 2.020079 CGATAATCGTCGACGCTTCT 57.980 50.000 32.19 21.36 44.06 2.85
4752 6825 2.391879 GGAAACCCGAGACGATAATCG 58.608 52.381 0.00 0.00 46.93 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.