Multiple sequence alignment - TraesCS6D01G217300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G217300 | chr6D | 100.000 | 2799 | 0 | 0 | 1 | 2799 | 307108989 | 307111787 | 0.000000e+00 | 5169.0 |
1 | TraesCS6D01G217300 | chr6B | 86.451 | 989 | 68 | 37 | 1184 | 2122 | 474426645 | 474427617 | 0.000000e+00 | 1024.0 |
2 | TraesCS6D01G217300 | chr6B | 92.188 | 512 | 24 | 8 | 2291 | 2799 | 474428018 | 474428516 | 0.000000e+00 | 710.0 |
3 | TraesCS6D01G217300 | chr6A | 86.203 | 877 | 114 | 5 | 200 | 1072 | 314831614 | 314830741 | 0.000000e+00 | 942.0 |
4 | TraesCS6D01G217300 | chr6A | 92.857 | 644 | 31 | 12 | 2160 | 2796 | 443414940 | 443415575 | 0.000000e+00 | 920.0 |
5 | TraesCS6D01G217300 | chr6A | 97.561 | 82 | 1 | 1 | 1810 | 1890 | 443414775 | 443414856 | 3.760000e-29 | 139.0 |
6 | TraesCS6D01G217300 | chr6A | 97.619 | 42 | 1 | 0 | 2008 | 2049 | 443414882 | 443414923 | 3.870000e-09 | 73.1 |
7 | TraesCS6D01G217300 | chr4B | 86.290 | 868 | 107 | 8 | 222 | 1083 | 476641744 | 476642605 | 0.000000e+00 | 933.0 |
8 | TraesCS6D01G217300 | chr4B | 86.060 | 868 | 109 | 8 | 222 | 1083 | 44946982 | 44946121 | 0.000000e+00 | 922.0 |
9 | TraesCS6D01G217300 | chr4B | 94.737 | 95 | 4 | 1 | 1866 | 1959 | 15414540 | 15414446 | 2.250000e-31 | 147.0 |
10 | TraesCS6D01G217300 | chr1B | 86.239 | 872 | 100 | 12 | 222 | 1083 | 52491626 | 52492487 | 0.000000e+00 | 928.0 |
11 | TraesCS6D01G217300 | chr1B | 86.334 | 761 | 99 | 4 | 297 | 1052 | 602073680 | 602074440 | 0.000000e+00 | 824.0 |
12 | TraesCS6D01G217300 | chr1B | 83.287 | 359 | 50 | 6 | 827 | 1183 | 428631609 | 428631959 | 3.480000e-84 | 322.0 |
13 | TraesCS6D01G217300 | chr1B | 77.035 | 344 | 35 | 22 | 2281 | 2621 | 658517480 | 658517782 | 1.040000e-34 | 158.0 |
14 | TraesCS6D01G217300 | chr1B | 100.000 | 29 | 0 | 0 | 2195 | 2223 | 658517335 | 658517363 | 1.000000e-03 | 54.7 |
15 | TraesCS6D01G217300 | chr1D | 86.527 | 861 | 92 | 17 | 236 | 1083 | 454622616 | 454623465 | 0.000000e+00 | 926.0 |
16 | TraesCS6D01G217300 | chr1D | 97.790 | 181 | 4 | 0 | 1 | 181 | 439464687 | 439464867 | 2.090000e-81 | 313.0 |
17 | TraesCS6D01G217300 | chr1D | 92.308 | 65 | 5 | 0 | 2068 | 2132 | 467611118 | 467611054 | 2.970000e-15 | 93.5 |
18 | TraesCS6D01G217300 | chr1D | 89.831 | 59 | 6 | 0 | 1121 | 1179 | 454623526 | 454623584 | 2.990000e-10 | 76.8 |
19 | TraesCS6D01G217300 | chr2A | 83.740 | 984 | 130 | 19 | 216 | 1183 | 624517771 | 624516802 | 0.000000e+00 | 904.0 |
20 | TraesCS6D01G217300 | chr2A | 97.701 | 87 | 2 | 0 | 1865 | 1951 | 601729508 | 601729422 | 1.740000e-32 | 150.0 |
21 | TraesCS6D01G217300 | chr5A | 83.216 | 995 | 139 | 17 | 213 | 1194 | 239395404 | 239396383 | 0.000000e+00 | 887.0 |
22 | TraesCS6D01G217300 | chr5A | 93.750 | 96 | 4 | 2 | 1865 | 1958 | 598530079 | 598530174 | 2.910000e-30 | 143.0 |
23 | TraesCS6D01G217300 | chr1A | 85.332 | 859 | 109 | 12 | 232 | 1083 | 569342811 | 569341963 | 0.000000e+00 | 872.0 |
24 | TraesCS6D01G217300 | chr4A | 86.859 | 761 | 95 | 4 | 297 | 1052 | 664333839 | 664334599 | 0.000000e+00 | 846.0 |
25 | TraesCS6D01G217300 | chr4A | 82.755 | 893 | 129 | 19 | 200 | 1083 | 624768115 | 624768991 | 0.000000e+00 | 773.0 |
26 | TraesCS6D01G217300 | chr4A | 82.250 | 800 | 88 | 33 | 414 | 1183 | 201630906 | 201631681 | 2.350000e-180 | 641.0 |
27 | TraesCS6D01G217300 | chr4A | 98.810 | 84 | 1 | 0 | 1867 | 1950 | 595271737 | 595271654 | 1.740000e-32 | 150.0 |
28 | TraesCS6D01G217300 | chr4A | 95.699 | 93 | 3 | 1 | 1867 | 1959 | 595272895 | 595272804 | 6.250000e-32 | 148.0 |
29 | TraesCS6D01G217300 | chr7B | 83.425 | 911 | 124 | 17 | 298 | 1193 | 332817057 | 332816159 | 0.000000e+00 | 821.0 |
30 | TraesCS6D01G217300 | chr7B | 83.358 | 673 | 74 | 25 | 533 | 1188 | 566623577 | 566624228 | 3.110000e-164 | 588.0 |
31 | TraesCS6D01G217300 | chr7B | 93.069 | 101 | 7 | 0 | 1 | 101 | 624785857 | 624785957 | 6.250000e-32 | 148.0 |
32 | TraesCS6D01G217300 | chr5D | 82.206 | 798 | 92 | 26 | 414 | 1187 | 489169804 | 489170575 | 2.350000e-180 | 641.0 |
33 | TraesCS6D01G217300 | chr4D | 87.407 | 135 | 9 | 1 | 2489 | 2623 | 414992611 | 414992485 | 6.250000e-32 | 148.0 |
34 | TraesCS6D01G217300 | chr4D | 90.654 | 107 | 9 | 1 | 1840 | 1946 | 398275556 | 398275661 | 1.050000e-29 | 141.0 |
35 | TraesCS6D01G217300 | chr4D | 78.448 | 116 | 3 | 10 | 2168 | 2275 | 414992958 | 414992857 | 3.890000e-04 | 56.5 |
36 | TraesCS6D01G217300 | chr5B | 94.681 | 94 | 3 | 2 | 1865 | 1957 | 11083175 | 11083083 | 8.080000e-31 | 145.0 |
37 | TraesCS6D01G217300 | chr5B | 89.655 | 58 | 1 | 2 | 1126 | 1183 | 425387130 | 425387182 | 5.000000e-08 | 69.4 |
38 | TraesCS6D01G217300 | chr3B | 95.604 | 91 | 3 | 1 | 1854 | 1944 | 543724317 | 543724228 | 8.080000e-31 | 145.0 |
39 | TraesCS6D01G217300 | chr2B | 96.386 | 83 | 3 | 0 | 1107 | 1189 | 737271095 | 737271177 | 1.350000e-28 | 137.0 |
40 | TraesCS6D01G217300 | chr2B | 79.888 | 179 | 27 | 4 | 1009 | 1186 | 547916016 | 547915846 | 3.790000e-24 | 122.0 |
41 | TraesCS6D01G217300 | chr2B | 92.537 | 67 | 5 | 0 | 1118 | 1184 | 770777668 | 770777734 | 2.290000e-16 | 97.1 |
42 | TraesCS6D01G217300 | chr2B | 92.308 | 39 | 3 | 0 | 2072 | 2110 | 480941263 | 480941301 | 3.890000e-04 | 56.5 |
43 | TraesCS6D01G217300 | chr7D | 96.491 | 57 | 2 | 0 | 1128 | 1184 | 221354179 | 221354235 | 8.250000e-16 | 95.3 |
44 | TraesCS6D01G217300 | chr7A | 91.176 | 68 | 5 | 1 | 1118 | 1184 | 92806502 | 92806569 | 1.070000e-14 | 91.6 |
45 | TraesCS6D01G217300 | chr2D | 92.500 | 40 | 0 | 3 | 1148 | 1184 | 129970055 | 129970094 | 1.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G217300 | chr6D | 307108989 | 307111787 | 2798 | False | 5169.000000 | 5169 | 100.000000 | 1 | 2799 | 1 | chr6D.!!$F1 | 2798 |
1 | TraesCS6D01G217300 | chr6B | 474426645 | 474428516 | 1871 | False | 867.000000 | 1024 | 89.319500 | 1184 | 2799 | 2 | chr6B.!!$F1 | 1615 |
2 | TraesCS6D01G217300 | chr6A | 314830741 | 314831614 | 873 | True | 942.000000 | 942 | 86.203000 | 200 | 1072 | 1 | chr6A.!!$R1 | 872 |
3 | TraesCS6D01G217300 | chr6A | 443414775 | 443415575 | 800 | False | 377.366667 | 920 | 96.012333 | 1810 | 2796 | 3 | chr6A.!!$F1 | 986 |
4 | TraesCS6D01G217300 | chr4B | 476641744 | 476642605 | 861 | False | 933.000000 | 933 | 86.290000 | 222 | 1083 | 1 | chr4B.!!$F1 | 861 |
5 | TraesCS6D01G217300 | chr4B | 44946121 | 44946982 | 861 | True | 922.000000 | 922 | 86.060000 | 222 | 1083 | 1 | chr4B.!!$R2 | 861 |
6 | TraesCS6D01G217300 | chr1B | 52491626 | 52492487 | 861 | False | 928.000000 | 928 | 86.239000 | 222 | 1083 | 1 | chr1B.!!$F1 | 861 |
7 | TraesCS6D01G217300 | chr1B | 602073680 | 602074440 | 760 | False | 824.000000 | 824 | 86.334000 | 297 | 1052 | 1 | chr1B.!!$F3 | 755 |
8 | TraesCS6D01G217300 | chr1D | 454622616 | 454623584 | 968 | False | 501.400000 | 926 | 88.179000 | 236 | 1179 | 2 | chr1D.!!$F2 | 943 |
9 | TraesCS6D01G217300 | chr2A | 624516802 | 624517771 | 969 | True | 904.000000 | 904 | 83.740000 | 216 | 1183 | 1 | chr2A.!!$R2 | 967 |
10 | TraesCS6D01G217300 | chr5A | 239395404 | 239396383 | 979 | False | 887.000000 | 887 | 83.216000 | 213 | 1194 | 1 | chr5A.!!$F1 | 981 |
11 | TraesCS6D01G217300 | chr1A | 569341963 | 569342811 | 848 | True | 872.000000 | 872 | 85.332000 | 232 | 1083 | 1 | chr1A.!!$R1 | 851 |
12 | TraesCS6D01G217300 | chr4A | 664333839 | 664334599 | 760 | False | 846.000000 | 846 | 86.859000 | 297 | 1052 | 1 | chr4A.!!$F3 | 755 |
13 | TraesCS6D01G217300 | chr4A | 624768115 | 624768991 | 876 | False | 773.000000 | 773 | 82.755000 | 200 | 1083 | 1 | chr4A.!!$F2 | 883 |
14 | TraesCS6D01G217300 | chr4A | 201630906 | 201631681 | 775 | False | 641.000000 | 641 | 82.250000 | 414 | 1183 | 1 | chr4A.!!$F1 | 769 |
15 | TraesCS6D01G217300 | chr7B | 332816159 | 332817057 | 898 | True | 821.000000 | 821 | 83.425000 | 298 | 1193 | 1 | chr7B.!!$R1 | 895 |
16 | TraesCS6D01G217300 | chr7B | 566623577 | 566624228 | 651 | False | 588.000000 | 588 | 83.358000 | 533 | 1188 | 1 | chr7B.!!$F1 | 655 |
17 | TraesCS6D01G217300 | chr5D | 489169804 | 489170575 | 771 | False | 641.000000 | 641 | 82.206000 | 414 | 1187 | 1 | chr5D.!!$F1 | 773 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
27 | 28 | 0.179468 | GCCCGGCAGTGTATTTCCTA | 59.821 | 55.0 | 3.91 | 0.0 | 0.0 | 2.94 | F |
1295 | 1837 | 0.028505 | CACACTTGCACACTGACAGC | 59.971 | 55.0 | 1.25 | 0.0 | 0.0 | 4.40 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1584 | 2127 | 0.179100 | CGCAGACAATCATCCTCCGT | 60.179 | 55.0 | 0.0 | 0.00 | 0.0 | 4.69 | R |
2136 | 2728 | 0.034896 | CTCAGGTTAACACGGTGCCT | 59.965 | 55.0 | 8.3 | 3.54 | 0.0 | 4.75 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 3.702048 | ATGTGTACGCCCGGCAGT | 61.702 | 61.111 | 10.77 | 10.86 | 0.00 | 4.40 |
18 | 19 | 3.950794 | ATGTGTACGCCCGGCAGTG | 62.951 | 63.158 | 10.77 | 0.14 | 0.00 | 3.66 |
20 | 21 | 2.990395 | TGTACGCCCGGCAGTGTA | 60.990 | 61.111 | 10.77 | 5.30 | 0.00 | 2.90 |
21 | 22 | 2.352821 | TGTACGCCCGGCAGTGTAT | 61.353 | 57.895 | 10.77 | 0.00 | 35.35 | 2.29 |
22 | 23 | 1.153509 | GTACGCCCGGCAGTGTATT | 60.154 | 57.895 | 10.77 | 0.00 | 35.35 | 1.89 |
23 | 24 | 0.741927 | GTACGCCCGGCAGTGTATTT | 60.742 | 55.000 | 10.77 | 0.00 | 35.35 | 1.40 |
24 | 25 | 0.460635 | TACGCCCGGCAGTGTATTTC | 60.461 | 55.000 | 10.77 | 0.00 | 0.00 | 2.17 |
25 | 26 | 2.469516 | CGCCCGGCAGTGTATTTCC | 61.470 | 63.158 | 10.77 | 0.00 | 0.00 | 3.13 |
26 | 27 | 1.077716 | GCCCGGCAGTGTATTTCCT | 60.078 | 57.895 | 3.91 | 0.00 | 0.00 | 3.36 |
27 | 28 | 0.179468 | GCCCGGCAGTGTATTTCCTA | 59.821 | 55.000 | 3.91 | 0.00 | 0.00 | 2.94 |
28 | 29 | 1.949465 | CCCGGCAGTGTATTTCCTAC | 58.051 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
29 | 30 | 1.485066 | CCCGGCAGTGTATTTCCTACT | 59.515 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
30 | 31 | 2.093128 | CCCGGCAGTGTATTTCCTACTT | 60.093 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
31 | 32 | 3.606687 | CCGGCAGTGTATTTCCTACTTT | 58.393 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
32 | 33 | 3.374058 | CCGGCAGTGTATTTCCTACTTTG | 59.626 | 47.826 | 0.00 | 0.00 | 0.00 | 2.77 |
33 | 34 | 4.250464 | CGGCAGTGTATTTCCTACTTTGA | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
34 | 35 | 4.092968 | CGGCAGTGTATTTCCTACTTTGAC | 59.907 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
35 | 36 | 4.092968 | GGCAGTGTATTTCCTACTTTGACG | 59.907 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
36 | 37 | 4.435651 | GCAGTGTATTTCCTACTTTGACGC | 60.436 | 45.833 | 0.00 | 0.00 | 0.00 | 5.19 |
37 | 38 | 4.092968 | CAGTGTATTTCCTACTTTGACGCC | 59.907 | 45.833 | 0.00 | 0.00 | 0.00 | 5.68 |
38 | 39 | 3.061697 | GTGTATTTCCTACTTTGACGCCG | 59.938 | 47.826 | 0.00 | 0.00 | 0.00 | 6.46 |
39 | 40 | 1.734163 | ATTTCCTACTTTGACGCCGG | 58.266 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
40 | 41 | 0.952010 | TTTCCTACTTTGACGCCGGC | 60.952 | 55.000 | 19.07 | 19.07 | 0.00 | 6.13 |
41 | 42 | 2.791501 | TTCCTACTTTGACGCCGGCC | 62.792 | 60.000 | 23.46 | 8.57 | 0.00 | 6.13 |
42 | 43 | 3.186047 | CTACTTTGACGCCGGCCG | 61.186 | 66.667 | 23.46 | 21.04 | 44.21 | 6.13 |
51 | 52 | 4.160635 | CGCCGGCCGTGATTTGAC | 62.161 | 66.667 | 26.12 | 3.02 | 0.00 | 3.18 |
52 | 53 | 3.810896 | GCCGGCCGTGATTTGACC | 61.811 | 66.667 | 26.12 | 0.00 | 0.00 | 4.02 |
53 | 54 | 3.131478 | CCGGCCGTGATTTGACCC | 61.131 | 66.667 | 26.12 | 0.00 | 0.00 | 4.46 |
54 | 55 | 3.496131 | CGGCCGTGATTTGACCCG | 61.496 | 66.667 | 19.50 | 0.00 | 0.00 | 5.28 |
55 | 56 | 2.046700 | GGCCGTGATTTGACCCGA | 60.047 | 61.111 | 0.00 | 0.00 | 0.00 | 5.14 |
56 | 57 | 2.106683 | GGCCGTGATTTGACCCGAG | 61.107 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
57 | 58 | 1.375523 | GCCGTGATTTGACCCGAGT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
58 | 59 | 1.635663 | GCCGTGATTTGACCCGAGTG | 61.636 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
59 | 60 | 1.019278 | CCGTGATTTGACCCGAGTGG | 61.019 | 60.000 | 0.00 | 0.00 | 41.37 | 4.00 |
72 | 73 | 3.939066 | CCCGAGTGGTCAATTACTTTCT | 58.061 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
73 | 74 | 4.324267 | CCCGAGTGGTCAATTACTTTCTT | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
74 | 75 | 4.154195 | CCCGAGTGGTCAATTACTTTCTTG | 59.846 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
75 | 76 | 4.378459 | CCGAGTGGTCAATTACTTTCTTGC | 60.378 | 45.833 | 0.00 | 0.00 | 0.00 | 4.01 |
76 | 77 | 4.452455 | CGAGTGGTCAATTACTTTCTTGCT | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
77 | 78 | 5.637810 | CGAGTGGTCAATTACTTTCTTGCTA | 59.362 | 40.000 | 0.00 | 0.00 | 0.00 | 3.49 |
78 | 79 | 6.313905 | CGAGTGGTCAATTACTTTCTTGCTAT | 59.686 | 38.462 | 0.00 | 0.00 | 0.00 | 2.97 |
79 | 80 | 7.148407 | CGAGTGGTCAATTACTTTCTTGCTATT | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
80 | 81 | 7.820648 | AGTGGTCAATTACTTTCTTGCTATTG | 58.179 | 34.615 | 0.00 | 0.00 | 0.00 | 1.90 |
81 | 82 | 7.665559 | AGTGGTCAATTACTTTCTTGCTATTGA | 59.334 | 33.333 | 0.00 | 0.00 | 31.63 | 2.57 |
82 | 83 | 7.965107 | GTGGTCAATTACTTTCTTGCTATTGAG | 59.035 | 37.037 | 0.00 | 0.00 | 33.96 | 3.02 |
83 | 84 | 7.665559 | TGGTCAATTACTTTCTTGCTATTGAGT | 59.334 | 33.333 | 0.00 | 0.00 | 33.96 | 3.41 |
84 | 85 | 8.515414 | GGTCAATTACTTTCTTGCTATTGAGTT | 58.485 | 33.333 | 0.00 | 0.00 | 33.96 | 3.01 |
85 | 86 | 9.548208 | GTCAATTACTTTCTTGCTATTGAGTTC | 57.452 | 33.333 | 0.00 | 0.00 | 33.96 | 3.01 |
86 | 87 | 9.283768 | TCAATTACTTTCTTGCTATTGAGTTCA | 57.716 | 29.630 | 0.00 | 0.00 | 30.85 | 3.18 |
89 | 90 | 9.678260 | ATTACTTTCTTGCTATTGAGTTCATCT | 57.322 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
90 | 91 | 7.992754 | ACTTTCTTGCTATTGAGTTCATCTT | 57.007 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
91 | 92 | 8.401490 | ACTTTCTTGCTATTGAGTTCATCTTT | 57.599 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
92 | 93 | 8.854117 | ACTTTCTTGCTATTGAGTTCATCTTTT | 58.146 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
93 | 94 | 9.688592 | CTTTCTTGCTATTGAGTTCATCTTTTT | 57.311 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
94 | 95 | 9.467258 | TTTCTTGCTATTGAGTTCATCTTTTTG | 57.533 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
95 | 96 | 7.596494 | TCTTGCTATTGAGTTCATCTTTTTGG | 58.404 | 34.615 | 0.00 | 0.00 | 0.00 | 3.28 |
96 | 97 | 5.713025 | TGCTATTGAGTTCATCTTTTTGGC | 58.287 | 37.500 | 0.00 | 0.00 | 0.00 | 4.52 |
97 | 98 | 5.243507 | TGCTATTGAGTTCATCTTTTTGGCA | 59.756 | 36.000 | 0.00 | 0.00 | 0.00 | 4.92 |
98 | 99 | 6.158598 | GCTATTGAGTTCATCTTTTTGGCAA | 58.841 | 36.000 | 0.00 | 0.00 | 0.00 | 4.52 |
99 | 100 | 6.815142 | GCTATTGAGTTCATCTTTTTGGCAAT | 59.185 | 34.615 | 0.00 | 0.00 | 0.00 | 3.56 |
100 | 101 | 7.201496 | GCTATTGAGTTCATCTTTTTGGCAATG | 60.201 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
101 | 102 | 5.534207 | TGAGTTCATCTTTTTGGCAATGT | 57.466 | 34.783 | 0.00 | 0.00 | 0.00 | 2.71 |
102 | 103 | 6.647334 | TGAGTTCATCTTTTTGGCAATGTA | 57.353 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
103 | 104 | 7.048629 | TGAGTTCATCTTTTTGGCAATGTAA | 57.951 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
104 | 105 | 7.669427 | TGAGTTCATCTTTTTGGCAATGTAAT | 58.331 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
105 | 106 | 8.801299 | TGAGTTCATCTTTTTGGCAATGTAATA | 58.199 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
106 | 107 | 8.986477 | AGTTCATCTTTTTGGCAATGTAATAC | 57.014 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
107 | 108 | 8.034804 | AGTTCATCTTTTTGGCAATGTAATACC | 58.965 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
108 | 109 | 6.872920 | TCATCTTTTTGGCAATGTAATACCC | 58.127 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
109 | 110 | 5.317733 | TCTTTTTGGCAATGTAATACCCG | 57.682 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
110 | 111 | 4.767928 | TCTTTTTGGCAATGTAATACCCGT | 59.232 | 37.500 | 0.00 | 0.00 | 0.00 | 5.28 |
111 | 112 | 5.244178 | TCTTTTTGGCAATGTAATACCCGTT | 59.756 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
112 | 113 | 4.705337 | TTTGGCAATGTAATACCCGTTC | 57.295 | 40.909 | 0.00 | 0.00 | 0.00 | 3.95 |
113 | 114 | 2.281517 | TGGCAATGTAATACCCGTTCG | 58.718 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
114 | 115 | 2.282407 | GGCAATGTAATACCCGTTCGT | 58.718 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
115 | 116 | 2.286025 | GGCAATGTAATACCCGTTCGTC | 59.714 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
116 | 117 | 2.286025 | GCAATGTAATACCCGTTCGTCC | 59.714 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
117 | 118 | 3.523547 | CAATGTAATACCCGTTCGTCCA | 58.476 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
118 | 119 | 3.891422 | ATGTAATACCCGTTCGTCCAA | 57.109 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
119 | 120 | 3.235157 | TGTAATACCCGTTCGTCCAAG | 57.765 | 47.619 | 0.00 | 0.00 | 0.00 | 3.61 |
120 | 121 | 2.562298 | TGTAATACCCGTTCGTCCAAGT | 59.438 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
121 | 122 | 3.761218 | TGTAATACCCGTTCGTCCAAGTA | 59.239 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
122 | 123 | 4.402155 | TGTAATACCCGTTCGTCCAAGTAT | 59.598 | 41.667 | 0.00 | 0.00 | 0.00 | 2.12 |
123 | 124 | 5.592282 | TGTAATACCCGTTCGTCCAAGTATA | 59.408 | 40.000 | 0.00 | 0.00 | 0.00 | 1.47 |
124 | 125 | 5.796424 | AATACCCGTTCGTCCAAGTATAT | 57.204 | 39.130 | 0.00 | 0.00 | 0.00 | 0.86 |
125 | 126 | 3.447918 | ACCCGTTCGTCCAAGTATATG | 57.552 | 47.619 | 0.00 | 0.00 | 0.00 | 1.78 |
126 | 127 | 2.762327 | ACCCGTTCGTCCAAGTATATGT | 59.238 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
127 | 128 | 3.120792 | CCCGTTCGTCCAAGTATATGTG | 58.879 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
128 | 129 | 3.429822 | CCCGTTCGTCCAAGTATATGTGT | 60.430 | 47.826 | 0.00 | 0.00 | 0.00 | 3.72 |
129 | 130 | 4.178540 | CCGTTCGTCCAAGTATATGTGTT | 58.821 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
130 | 131 | 5.342433 | CCGTTCGTCCAAGTATATGTGTTA | 58.658 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
131 | 132 | 5.806502 | CCGTTCGTCCAAGTATATGTGTTAA | 59.193 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
132 | 133 | 6.237648 | CCGTTCGTCCAAGTATATGTGTTAAC | 60.238 | 42.308 | 0.00 | 0.00 | 0.00 | 2.01 |
133 | 134 | 6.308524 | CGTTCGTCCAAGTATATGTGTTAACA | 59.691 | 38.462 | 3.59 | 3.59 | 41.58 | 2.41 |
134 | 135 | 7.148771 | CGTTCGTCCAAGTATATGTGTTAACAA | 60.149 | 37.037 | 10.51 | 1.41 | 40.46 | 2.83 |
135 | 136 | 7.585286 | TCGTCCAAGTATATGTGTTAACAAC | 57.415 | 36.000 | 10.51 | 4.52 | 40.46 | 3.32 |
136 | 137 | 7.153315 | TCGTCCAAGTATATGTGTTAACAACA | 58.847 | 34.615 | 10.51 | 11.14 | 40.46 | 3.33 |
137 | 138 | 7.329962 | TCGTCCAAGTATATGTGTTAACAACAG | 59.670 | 37.037 | 10.51 | 1.96 | 43.10 | 3.16 |
138 | 139 | 7.241376 | GTCCAAGTATATGTGTTAACAACAGC | 58.759 | 38.462 | 10.51 | 0.00 | 43.10 | 4.40 |
139 | 140 | 6.373216 | TCCAAGTATATGTGTTAACAACAGCC | 59.627 | 38.462 | 10.51 | 0.00 | 43.10 | 4.85 |
140 | 141 | 6.247903 | CAAGTATATGTGTTAACAACAGCCG | 58.752 | 40.000 | 10.51 | 0.00 | 43.10 | 5.52 |
141 | 142 | 5.726397 | AGTATATGTGTTAACAACAGCCGA | 58.274 | 37.500 | 10.51 | 0.02 | 43.10 | 5.54 |
142 | 143 | 6.167685 | AGTATATGTGTTAACAACAGCCGAA | 58.832 | 36.000 | 10.51 | 0.00 | 43.10 | 4.30 |
143 | 144 | 5.950758 | ATATGTGTTAACAACAGCCGAAA | 57.049 | 34.783 | 10.51 | 0.00 | 43.10 | 3.46 |
144 | 145 | 3.684103 | TGTGTTAACAACAGCCGAAAG | 57.316 | 42.857 | 10.51 | 0.00 | 43.10 | 2.62 |
145 | 146 | 2.223386 | TGTGTTAACAACAGCCGAAAGC | 60.223 | 45.455 | 10.51 | 0.00 | 43.10 | 3.51 |
146 | 147 | 1.335496 | TGTTAACAACAGCCGAAAGCC | 59.665 | 47.619 | 5.64 | 0.00 | 45.47 | 4.35 |
147 | 148 | 0.955905 | TTAACAACAGCCGAAAGCCC | 59.044 | 50.000 | 0.00 | 0.00 | 45.47 | 5.19 |
148 | 149 | 0.891904 | TAACAACAGCCGAAAGCCCC | 60.892 | 55.000 | 0.00 | 0.00 | 45.47 | 5.80 |
149 | 150 | 3.737172 | CAACAGCCGAAAGCCCCG | 61.737 | 66.667 | 0.00 | 0.00 | 45.47 | 5.73 |
150 | 151 | 3.948719 | AACAGCCGAAAGCCCCGA | 61.949 | 61.111 | 0.00 | 0.00 | 45.47 | 5.14 |
151 | 152 | 3.268103 | AACAGCCGAAAGCCCCGAT | 62.268 | 57.895 | 0.00 | 0.00 | 45.47 | 4.18 |
152 | 153 | 1.906105 | AACAGCCGAAAGCCCCGATA | 61.906 | 55.000 | 0.00 | 0.00 | 45.47 | 2.92 |
153 | 154 | 1.153249 | CAGCCGAAAGCCCCGATAA | 60.153 | 57.895 | 0.00 | 0.00 | 45.47 | 1.75 |
154 | 155 | 0.535102 | CAGCCGAAAGCCCCGATAAT | 60.535 | 55.000 | 0.00 | 0.00 | 45.47 | 1.28 |
155 | 156 | 0.535102 | AGCCGAAAGCCCCGATAATG | 60.535 | 55.000 | 0.00 | 0.00 | 45.47 | 1.90 |
156 | 157 | 0.534203 | GCCGAAAGCCCCGATAATGA | 60.534 | 55.000 | 0.00 | 0.00 | 34.35 | 2.57 |
157 | 158 | 1.882352 | GCCGAAAGCCCCGATAATGAT | 60.882 | 52.381 | 0.00 | 0.00 | 34.35 | 2.45 |
158 | 159 | 2.504367 | CCGAAAGCCCCGATAATGATT | 58.496 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
159 | 160 | 2.484264 | CCGAAAGCCCCGATAATGATTC | 59.516 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
160 | 161 | 2.484264 | CGAAAGCCCCGATAATGATTCC | 59.516 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
161 | 162 | 3.486383 | GAAAGCCCCGATAATGATTCCA | 58.514 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
162 | 163 | 3.593442 | AAGCCCCGATAATGATTCCAA | 57.407 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
163 | 164 | 2.863809 | AGCCCCGATAATGATTCCAAC | 58.136 | 47.619 | 0.00 | 0.00 | 0.00 | 3.77 |
164 | 165 | 2.174639 | AGCCCCGATAATGATTCCAACA | 59.825 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
165 | 166 | 2.955660 | GCCCCGATAATGATTCCAACAA | 59.044 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
166 | 167 | 3.573967 | GCCCCGATAATGATTCCAACAAT | 59.426 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
167 | 168 | 4.039124 | GCCCCGATAATGATTCCAACAATT | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
168 | 169 | 5.453198 | GCCCCGATAATGATTCCAACAATTT | 60.453 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
169 | 170 | 5.984926 | CCCCGATAATGATTCCAACAATTTG | 59.015 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
170 | 171 | 5.463061 | CCCGATAATGATTCCAACAATTTGC | 59.537 | 40.000 | 0.00 | 0.00 | 0.00 | 3.68 |
171 | 172 | 6.041511 | CCGATAATGATTCCAACAATTTGCA | 58.958 | 36.000 | 0.00 | 0.00 | 0.00 | 4.08 |
172 | 173 | 6.019640 | CCGATAATGATTCCAACAATTTGCAC | 60.020 | 38.462 | 0.00 | 0.00 | 0.00 | 4.57 |
173 | 174 | 6.753279 | CGATAATGATTCCAACAATTTGCACT | 59.247 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
174 | 175 | 7.914871 | CGATAATGATTCCAACAATTTGCACTA | 59.085 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
175 | 176 | 9.241317 | GATAATGATTCCAACAATTTGCACTAG | 57.759 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
176 | 177 | 6.594788 | ATGATTCCAACAATTTGCACTAGT | 57.405 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
177 | 178 | 7.701539 | ATGATTCCAACAATTTGCACTAGTA | 57.298 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
178 | 179 | 6.908825 | TGATTCCAACAATTTGCACTAGTAC | 58.091 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
179 | 180 | 6.488344 | TGATTCCAACAATTTGCACTAGTACA | 59.512 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
180 | 181 | 6.701145 | TTCCAACAATTTGCACTAGTACAA | 57.299 | 33.333 | 4.33 | 4.33 | 0.00 | 2.41 |
181 | 182 | 6.701145 | TCCAACAATTTGCACTAGTACAAA | 57.299 | 33.333 | 20.75 | 20.75 | 39.87 | 2.83 |
182 | 183 | 7.283625 | TCCAACAATTTGCACTAGTACAAAT | 57.716 | 32.000 | 22.94 | 22.94 | 45.84 | 2.32 |
192 | 193 | 9.991906 | TTTGCACTAGTACAAATTACTAAGAGT | 57.008 | 29.630 | 15.82 | 0.00 | 31.09 | 3.24 |
281 | 285 | 3.968649 | AGTTGCACACACATTGATGTTC | 58.031 | 40.909 | 0.00 | 0.00 | 39.39 | 3.18 |
293 | 297 | 2.189594 | TGATGTTCAGTTGGCAGGAG | 57.810 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
294 | 298 | 1.699083 | TGATGTTCAGTTGGCAGGAGA | 59.301 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
308 | 312 | 2.806745 | GCAGGAGAACTAGTTGCACACA | 60.807 | 50.000 | 14.14 | 0.00 | 34.99 | 3.72 |
310 | 314 | 1.792949 | GGAGAACTAGTTGCACACACG | 59.207 | 52.381 | 14.14 | 0.00 | 0.00 | 4.49 |
311 | 315 | 2.545113 | GGAGAACTAGTTGCACACACGA | 60.545 | 50.000 | 14.14 | 0.00 | 0.00 | 4.35 |
312 | 316 | 3.318017 | GAGAACTAGTTGCACACACGAT | 58.682 | 45.455 | 14.14 | 0.00 | 0.00 | 3.73 |
313 | 317 | 3.059884 | AGAACTAGTTGCACACACGATG | 58.940 | 45.455 | 14.14 | 0.00 | 0.00 | 3.84 |
315 | 319 | 3.319137 | ACTAGTTGCACACACGATGAT | 57.681 | 42.857 | 0.00 | 0.00 | 0.00 | 2.45 |
316 | 320 | 2.995939 | ACTAGTTGCACACACGATGATG | 59.004 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
319 | 408 | 2.618241 | AGTTGCACACACGATGATGTTT | 59.382 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
353 | 482 | 4.394439 | TGTAGTCTAGTTGCACACACAA | 57.606 | 40.909 | 0.00 | 0.00 | 0.00 | 3.33 |
355 | 484 | 6.091718 | TGTAGTCTAGTTGCACACACAATA | 57.908 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
403 | 533 | 4.768583 | TGCACATACATATGCTCAGTTGA | 58.231 | 39.130 | 1.58 | 0.00 | 42.55 | 3.18 |
409 | 539 | 6.881065 | ACATACATATGCTCAGTTGACTTGTT | 59.119 | 34.615 | 1.58 | 0.00 | 37.19 | 2.83 |
410 | 540 | 7.391554 | ACATACATATGCTCAGTTGACTTGTTT | 59.608 | 33.333 | 1.58 | 0.00 | 37.19 | 2.83 |
473 | 603 | 4.641396 | ACACTAGTTGCACACACATATGT | 58.359 | 39.130 | 1.41 | 1.41 | 40.80 | 2.29 |
497 | 627 | 1.017177 | TTGACGCGGCAATGTAGTCC | 61.017 | 55.000 | 26.47 | 0.00 | 0.00 | 3.85 |
502 | 632 | 0.447801 | GCGGCAATGTAGTCCAGTTG | 59.552 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
507 | 637 | 2.293122 | GCAATGTAGTCCAGTTGCACAA | 59.707 | 45.455 | 4.26 | 0.00 | 44.63 | 3.33 |
513 | 643 | 3.441496 | AGTCCAGTTGCACAAACATTG | 57.559 | 42.857 | 0.00 | 0.00 | 41.61 | 2.82 |
522 | 652 | 7.814107 | CCAGTTGCACAAACATTGATATTTAGT | 59.186 | 33.333 | 0.00 | 0.00 | 41.61 | 2.24 |
525 | 655 | 9.190858 | GTTGCACAAACATTGATATTTAGTTGA | 57.809 | 29.630 | 0.00 | 0.00 | 38.75 | 3.18 |
528 | 658 | 8.853345 | GCACAAACATTGATATTTAGTTGACAG | 58.147 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
680 | 1097 | 5.163468 | ACACACATTGATGTTTAGTTGGCAA | 60.163 | 36.000 | 0.00 | 0.00 | 39.39 | 4.52 |
727 | 1225 | 2.526120 | GGCGCGGCAATGTAGTCTC | 61.526 | 63.158 | 29.32 | 0.00 | 0.00 | 3.36 |
746 | 1244 | 3.063861 | TCTCGTTGCACACATATTGATGC | 59.936 | 43.478 | 0.00 | 0.00 | 36.43 | 3.91 |
797 | 1300 | 2.502510 | CAGTTGGCGCGACAATGC | 60.503 | 61.111 | 32.77 | 19.38 | 32.24 | 3.56 |
888 | 1393 | 4.691216 | GGATCTACTTTTGAAGAGCACGTT | 59.309 | 41.667 | 0.00 | 0.00 | 0.00 | 3.99 |
945 | 1450 | 3.364621 | TCGACACGCGGTTTAAAAGATAC | 59.635 | 43.478 | 12.47 | 0.00 | 41.33 | 2.24 |
951 | 1456 | 4.090498 | ACGCGGTTTAAAAGATACGTCTTC | 59.910 | 41.667 | 12.47 | 0.00 | 43.80 | 2.87 |
1041 | 1556 | 1.406069 | GGCATCCATCACGTGAGAAGT | 60.406 | 52.381 | 24.41 | 3.69 | 0.00 | 3.01 |
1054 | 1569 | 6.642540 | TCACGTGAGAAGTGATCATATAATGC | 59.357 | 38.462 | 15.76 | 0.00 | 42.91 | 3.56 |
1077 | 1593 | 8.276060 | TGCGTGATTAATTAACAGTGTTTTTC | 57.724 | 30.769 | 14.90 | 0.02 | 0.00 | 2.29 |
1085 | 1601 | 9.959749 | TTAATTAACAGTGTTTTTCTTAGCCAG | 57.040 | 29.630 | 14.90 | 0.00 | 0.00 | 4.85 |
1215 | 1756 | 3.121463 | CGTAACCGATTCGAATTGGATCG | 60.121 | 47.826 | 39.48 | 32.38 | 41.71 | 3.69 |
1228 | 1769 | 2.869101 | TGGATCGACACCCAATTTCA | 57.131 | 45.000 | 7.82 | 0.00 | 0.00 | 2.69 |
1231 | 1772 | 1.743394 | GATCGACACCCAATTTCACCC | 59.257 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
1252 | 1794 | 1.133181 | TGCAACAGATGTCCCCTGGA | 61.133 | 55.000 | 0.00 | 0.00 | 36.03 | 3.86 |
1295 | 1837 | 0.028505 | CACACTTGCACACTGACAGC | 59.971 | 55.000 | 1.25 | 0.00 | 0.00 | 4.40 |
1303 | 1845 | 2.125753 | CACTGACAGCGCCTCCTC | 60.126 | 66.667 | 2.29 | 0.00 | 0.00 | 3.71 |
1334 | 1877 | 1.032014 | AACTCCAACATGCACACACC | 58.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1364 | 1907 | 4.639310 | ACTCGTAATCTCCACGTAGTTGAT | 59.361 | 41.667 | 0.00 | 0.00 | 41.61 | 2.57 |
1365 | 1908 | 5.819379 | ACTCGTAATCTCCACGTAGTTGATA | 59.181 | 40.000 | 0.00 | 0.00 | 41.61 | 2.15 |
1392 | 1935 | 1.888512 | ACGGCTTGCTTGATGTTGATT | 59.111 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
1520 | 2063 | 0.549950 | AAGCTGGTCATCATCAGGGG | 59.450 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1522 | 2065 | 1.227764 | CTGGTCATCATCAGGGGCG | 60.228 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
1594 | 2137 | 3.822192 | CGTGCCGACGGAGGATGA | 61.822 | 66.667 | 20.50 | 0.00 | 42.18 | 2.92 |
1596 | 2139 | 1.144057 | GTGCCGACGGAGGATGATT | 59.856 | 57.895 | 20.50 | 0.00 | 0.00 | 2.57 |
1623 | 2166 | 1.741770 | CAAGAGGTGCTACACGGCC | 60.742 | 63.158 | 0.00 | 0.00 | 34.83 | 6.13 |
1624 | 2167 | 2.214216 | AAGAGGTGCTACACGGCCA | 61.214 | 57.895 | 2.24 | 0.00 | 34.83 | 5.36 |
1697 | 2240 | 4.332637 | GTGCGTGCCAACCTGCTG | 62.333 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
1705 | 2248 | 1.002868 | CCAACCTGCTGAGTCCCTG | 60.003 | 63.158 | 0.00 | 0.00 | 0.00 | 4.45 |
1706 | 2249 | 1.757306 | CAACCTGCTGAGTCCCTGT | 59.243 | 57.895 | 0.00 | 0.00 | 0.00 | 4.00 |
1707 | 2250 | 0.976641 | CAACCTGCTGAGTCCCTGTA | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1708 | 2251 | 0.977395 | AACCTGCTGAGTCCCTGTAC | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1709 | 2252 | 0.905337 | ACCTGCTGAGTCCCTGTACC | 60.905 | 60.000 | 0.00 | 0.00 | 0.00 | 3.34 |
1710 | 2253 | 0.616111 | CCTGCTGAGTCCCTGTACCT | 60.616 | 60.000 | 0.00 | 0.00 | 0.00 | 3.08 |
1711 | 2254 | 0.534412 | CTGCTGAGTCCCTGTACCTG | 59.466 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1712 | 2255 | 1.219393 | GCTGAGTCCCTGTACCTGC | 59.781 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
1713 | 2256 | 1.513158 | CTGAGTCCCTGTACCTGCG | 59.487 | 63.158 | 0.00 | 0.00 | 0.00 | 5.18 |
1714 | 2257 | 1.228769 | TGAGTCCCTGTACCTGCGT | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
1720 | 2263 | 2.676342 | GTCCCTGTACCTGCGTATTTTG | 59.324 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1724 | 2267 | 3.426159 | CCTGTACCTGCGTATTTTGCTTG | 60.426 | 47.826 | 0.00 | 0.00 | 0.00 | 4.01 |
1725 | 2268 | 3.142951 | TGTACCTGCGTATTTTGCTTGT | 58.857 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
1736 | 2279 | 6.080406 | CGTATTTTGCTTGTTCTTCTTCCTC | 58.920 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1739 | 2282 | 5.757850 | TTTGCTTGTTCTTCTTCCTCTTC | 57.242 | 39.130 | 0.00 | 0.00 | 0.00 | 2.87 |
1741 | 2284 | 4.384056 | TGCTTGTTCTTCTTCCTCTTCTG | 58.616 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
1743 | 2286 | 5.070446 | TGCTTGTTCTTCTTCCTCTTCTGTA | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
1745 | 2288 | 7.039011 | TGCTTGTTCTTCTTCCTCTTCTGTATA | 60.039 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
1746 | 2289 | 7.276878 | GCTTGTTCTTCTTCCTCTTCTGTATAC | 59.723 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
1748 | 2291 | 6.724441 | TGTTCTTCTTCCTCTTCTGTATACCA | 59.276 | 38.462 | 0.00 | 0.00 | 0.00 | 3.25 |
1749 | 2292 | 7.400339 | TGTTCTTCTTCCTCTTCTGTATACCAT | 59.600 | 37.037 | 0.00 | 0.00 | 0.00 | 3.55 |
1751 | 2294 | 8.380742 | TCTTCTTCCTCTTCTGTATACCATTT | 57.619 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
1752 | 2295 | 8.826765 | TCTTCTTCCTCTTCTGTATACCATTTT | 58.173 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1753 | 2296 | 9.454859 | CTTCTTCCTCTTCTGTATACCATTTTT | 57.545 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1755 | 2298 | 8.826765 | TCTTCCTCTTCTGTATACCATTTTTCT | 58.173 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1758 | 2301 | 8.204836 | TCCTCTTCTGTATACCATTTTTCTAGC | 58.795 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
1759 | 2302 | 7.987458 | CCTCTTCTGTATACCATTTTTCTAGCA | 59.013 | 37.037 | 0.00 | 0.00 | 0.00 | 3.49 |
1760 | 2303 | 9.553064 | CTCTTCTGTATACCATTTTTCTAGCAT | 57.447 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
1761 | 2304 | 9.330063 | TCTTCTGTATACCATTTTTCTAGCATG | 57.670 | 33.333 | 0.00 | 0.00 | 0.00 | 4.06 |
1762 | 2305 | 7.496529 | TCTGTATACCATTTTTCTAGCATGC | 57.503 | 36.000 | 10.51 | 10.51 | 0.00 | 4.06 |
1763 | 2306 | 6.486657 | TCTGTATACCATTTTTCTAGCATGCC | 59.513 | 38.462 | 15.66 | 0.00 | 0.00 | 4.40 |
1765 | 2308 | 3.874392 | ACCATTTTTCTAGCATGCCAC | 57.126 | 42.857 | 15.66 | 0.00 | 0.00 | 5.01 |
1766 | 2309 | 2.497273 | ACCATTTTTCTAGCATGCCACC | 59.503 | 45.455 | 15.66 | 0.00 | 0.00 | 4.61 |
1767 | 2310 | 2.480073 | CCATTTTTCTAGCATGCCACCG | 60.480 | 50.000 | 15.66 | 0.02 | 0.00 | 4.94 |
1775 | 2343 | 0.611618 | AGCATGCCACCGATTTTGGA | 60.612 | 50.000 | 15.66 | 0.00 | 36.02 | 3.53 |
1778 | 2346 | 1.322538 | ATGCCACCGATTTTGGAGCC | 61.323 | 55.000 | 0.00 | 0.00 | 36.02 | 4.70 |
1790 | 2358 | 4.785453 | GGAGCCTGTGCCTTCCGG | 62.785 | 72.222 | 0.00 | 0.00 | 38.69 | 5.14 |
1795 | 2363 | 1.966451 | CCTGTGCCTTCCGGACAAC | 60.966 | 63.158 | 1.83 | 0.22 | 0.00 | 3.32 |
1796 | 2364 | 1.071471 | CTGTGCCTTCCGGACAACT | 59.929 | 57.895 | 1.83 | 0.00 | 0.00 | 3.16 |
1797 | 2365 | 0.951040 | CTGTGCCTTCCGGACAACTC | 60.951 | 60.000 | 1.83 | 0.00 | 0.00 | 3.01 |
1801 | 2370 | 1.314730 | GCCTTCCGGACAACTCAAAA | 58.685 | 50.000 | 1.83 | 0.00 | 0.00 | 2.44 |
1968 | 2538 | 6.073447 | TGGTGACAAATTATCCATGGTACT | 57.927 | 37.500 | 12.58 | 0.38 | 37.44 | 2.73 |
1971 | 2541 | 7.093988 | TGGTGACAAATTATCCATGGTACTTTG | 60.094 | 37.037 | 21.75 | 21.75 | 37.44 | 2.77 |
1983 | 2553 | 9.950496 | ATCCATGGTACTTTGTAAGATATCATC | 57.050 | 33.333 | 12.58 | 0.00 | 0.00 | 2.92 |
1984 | 2554 | 9.159254 | TCCATGGTACTTTGTAAGATATCATCT | 57.841 | 33.333 | 12.58 | 0.00 | 42.61 | 2.90 |
1985 | 2555 | 9.212641 | CCATGGTACTTTGTAAGATATCATCTG | 57.787 | 37.037 | 2.57 | 0.00 | 40.13 | 2.90 |
1986 | 2556 | 9.987272 | CATGGTACTTTGTAAGATATCATCTGA | 57.013 | 33.333 | 5.32 | 0.00 | 40.13 | 3.27 |
1988 | 2558 | 9.817809 | TGGTACTTTGTAAGATATCATCTGAAC | 57.182 | 33.333 | 5.32 | 0.00 | 40.13 | 3.18 |
1996 | 2566 | 9.755804 | TGTAAGATATCATCTGAACTGTCATTC | 57.244 | 33.333 | 5.32 | 0.00 | 40.13 | 2.67 |
2102 | 2694 | 5.070001 | AGCTAACTGCCACAAAATGAACTA | 58.930 | 37.500 | 0.00 | 0.00 | 44.23 | 2.24 |
2110 | 2702 | 5.238432 | TGCCACAAAATGAACTAGTGTGTAG | 59.762 | 40.000 | 0.00 | 0.00 | 38.30 | 2.74 |
2122 | 2714 | 9.309516 | TGAACTAGTGTGTAGAACTTTTTGTAG | 57.690 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
2123 | 2715 | 9.525409 | GAACTAGTGTGTAGAACTTTTTGTAGA | 57.475 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
2124 | 2716 | 9.880157 | AACTAGTGTGTAGAACTTTTTGTAGAA | 57.120 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
2127 | 2719 | 8.732746 | AGTGTGTAGAACTTTTTGTAGAATGT | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
2128 | 2720 | 9.174166 | AGTGTGTAGAACTTTTTGTAGAATGTT | 57.826 | 29.630 | 0.00 | 0.00 | 31.85 | 2.71 |
2129 | 2721 | 9.783256 | GTGTGTAGAACTTTTTGTAGAATGTTT | 57.217 | 29.630 | 0.00 | 0.00 | 30.06 | 2.83 |
2139 | 2731 | 8.865590 | TTTTTGTAGAATGTTTACTCAAAGGC | 57.134 | 30.769 | 0.00 | 0.00 | 0.00 | 4.35 |
2140 | 2732 | 7.575414 | TTTGTAGAATGTTTACTCAAAGGCA | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 4.75 |
2142 | 2734 | 5.472137 | TGTAGAATGTTTACTCAAAGGCACC | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2143 | 2735 | 3.502211 | AGAATGTTTACTCAAAGGCACCG | 59.498 | 43.478 | 0.00 | 0.00 | 0.00 | 4.94 |
2144 | 2736 | 2.335316 | TGTTTACTCAAAGGCACCGT | 57.665 | 45.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2145 | 2737 | 1.944024 | TGTTTACTCAAAGGCACCGTG | 59.056 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
2146 | 2738 | 1.944709 | GTTTACTCAAAGGCACCGTGT | 59.055 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
2147 | 2739 | 2.335316 | TTACTCAAAGGCACCGTGTT | 57.665 | 45.000 | 0.00 | 0.00 | 0.00 | 3.32 |
2148 | 2740 | 3.472283 | TTACTCAAAGGCACCGTGTTA | 57.528 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
2150 | 2742 | 1.944709 | ACTCAAAGGCACCGTGTTAAC | 59.055 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
2151 | 2743 | 1.265905 | CTCAAAGGCACCGTGTTAACC | 59.734 | 52.381 | 2.48 | 0.00 | 0.00 | 2.85 |
2155 | 2747 | 0.034896 | AGGCACCGTGTTAACCTGAG | 59.965 | 55.000 | 2.48 | 0.00 | 0.00 | 3.35 |
2156 | 2748 | 0.034337 | GGCACCGTGTTAACCTGAGA | 59.966 | 55.000 | 2.48 | 0.00 | 0.00 | 3.27 |
2157 | 2749 | 1.541670 | GGCACCGTGTTAACCTGAGAA | 60.542 | 52.381 | 2.48 | 0.00 | 0.00 | 2.87 |
2158 | 2750 | 1.798813 | GCACCGTGTTAACCTGAGAAG | 59.201 | 52.381 | 2.48 | 0.00 | 0.00 | 2.85 |
2159 | 2751 | 1.798813 | CACCGTGTTAACCTGAGAAGC | 59.201 | 52.381 | 2.48 | 0.00 | 0.00 | 3.86 |
2160 | 2752 | 1.414919 | ACCGTGTTAACCTGAGAAGCA | 59.585 | 47.619 | 2.48 | 0.00 | 0.00 | 3.91 |
2162 | 2754 | 1.461127 | CGTGTTAACCTGAGAAGCAGC | 59.539 | 52.381 | 2.48 | 0.00 | 43.50 | 5.25 |
2163 | 2755 | 2.494059 | GTGTTAACCTGAGAAGCAGCA | 58.506 | 47.619 | 2.48 | 0.00 | 43.50 | 4.41 |
2165 | 2757 | 2.158827 | TGTTAACCTGAGAAGCAGCACA | 60.159 | 45.455 | 2.48 | 0.00 | 43.50 | 4.57 |
2187 | 2933 | 7.230222 | CACAGTCTGTAAAAATGACGATCTTC | 58.770 | 38.462 | 4.85 | 0.00 | 36.01 | 2.87 |
2236 | 2982 | 3.892284 | TGGGACACGTATATGCCAAATT | 58.108 | 40.909 | 4.66 | 0.00 | 0.00 | 1.82 |
2245 | 2991 | 4.265085 | CGTATATGCCAAATTGTGTTGCAC | 59.735 | 41.667 | 0.00 | 0.00 | 34.56 | 4.57 |
2255 | 3001 | 0.383590 | TGTGTTGCACAATGGGAACG | 59.616 | 50.000 | 0.00 | 0.00 | 41.69 | 3.95 |
2256 | 3002 | 0.665835 | GTGTTGCACAATGGGAACGA | 59.334 | 50.000 | 0.00 | 0.00 | 41.40 | 3.85 |
2281 | 3053 | 3.858503 | GCAAAGCATCAGAAACCTTCCAC | 60.859 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2283 | 3055 | 2.787994 | AGCATCAGAAACCTTCCACAG | 58.212 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
2318 | 3146 | 6.156949 | TGAATAGAGGATACAAGTTTGCTCCT | 59.843 | 38.462 | 13.44 | 13.44 | 42.79 | 3.69 |
2324 | 3152 | 7.988028 | AGAGGATACAAGTTTGCTCCTAAATAC | 59.012 | 37.037 | 13.51 | 4.94 | 41.21 | 1.89 |
2325 | 3153 | 7.862675 | AGGATACAAGTTTGCTCCTAAATACT | 58.137 | 34.615 | 12.42 | 0.00 | 40.09 | 2.12 |
2326 | 3154 | 7.988028 | AGGATACAAGTTTGCTCCTAAATACTC | 59.012 | 37.037 | 12.42 | 0.00 | 40.09 | 2.59 |
2327 | 3155 | 7.988028 | GGATACAAGTTTGCTCCTAAATACTCT | 59.012 | 37.037 | 6.76 | 0.00 | 33.10 | 3.24 |
2362 | 3196 | 7.224753 | CCACATTGATAACGTTAGCAAGACTAT | 59.775 | 37.037 | 33.88 | 20.09 | 41.62 | 2.12 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.702048 | ACTGCCGGGCGTACACAT | 61.702 | 61.111 | 15.40 | 0.00 | 0.00 | 3.21 |
4 | 5 | 0.741927 | AAATACACTGCCGGGCGTAC | 60.742 | 55.000 | 15.40 | 0.00 | 0.00 | 3.67 |
7 | 8 | 2.469516 | GGAAATACACTGCCGGGCG | 61.470 | 63.158 | 15.40 | 11.70 | 0.00 | 6.13 |
8 | 9 | 0.179468 | TAGGAAATACACTGCCGGGC | 59.821 | 55.000 | 13.32 | 13.32 | 0.00 | 6.13 |
9 | 10 | 1.485066 | AGTAGGAAATACACTGCCGGG | 59.515 | 52.381 | 2.18 | 0.00 | 36.79 | 5.73 |
10 | 11 | 2.981859 | AGTAGGAAATACACTGCCGG | 57.018 | 50.000 | 0.00 | 0.00 | 36.79 | 6.13 |
12 | 13 | 4.092968 | CGTCAAAGTAGGAAATACACTGCC | 59.907 | 45.833 | 0.00 | 0.00 | 36.79 | 4.85 |
13 | 14 | 4.435651 | GCGTCAAAGTAGGAAATACACTGC | 60.436 | 45.833 | 0.00 | 0.00 | 36.79 | 4.40 |
14 | 15 | 4.092968 | GGCGTCAAAGTAGGAAATACACTG | 59.907 | 45.833 | 0.00 | 0.00 | 36.79 | 3.66 |
15 | 16 | 4.251268 | GGCGTCAAAGTAGGAAATACACT | 58.749 | 43.478 | 0.00 | 0.00 | 36.79 | 3.55 |
16 | 17 | 3.061697 | CGGCGTCAAAGTAGGAAATACAC | 59.938 | 47.826 | 0.00 | 0.00 | 36.79 | 2.90 |
17 | 18 | 3.255725 | CGGCGTCAAAGTAGGAAATACA | 58.744 | 45.455 | 0.00 | 0.00 | 36.79 | 2.29 |
18 | 19 | 2.606272 | CCGGCGTCAAAGTAGGAAATAC | 59.394 | 50.000 | 6.01 | 0.00 | 34.30 | 1.89 |
20 | 21 | 1.734163 | CCGGCGTCAAAGTAGGAAAT | 58.266 | 50.000 | 6.01 | 0.00 | 0.00 | 2.17 |
21 | 22 | 0.952010 | GCCGGCGTCAAAGTAGGAAA | 60.952 | 55.000 | 12.58 | 0.00 | 0.00 | 3.13 |
22 | 23 | 1.375013 | GCCGGCGTCAAAGTAGGAA | 60.375 | 57.895 | 12.58 | 0.00 | 0.00 | 3.36 |
23 | 24 | 2.263540 | GCCGGCGTCAAAGTAGGA | 59.736 | 61.111 | 12.58 | 0.00 | 0.00 | 2.94 |
24 | 25 | 2.818274 | GGCCGGCGTCAAAGTAGG | 60.818 | 66.667 | 22.54 | 0.00 | 0.00 | 3.18 |
25 | 26 | 3.186047 | CGGCCGGCGTCAAAGTAG | 61.186 | 66.667 | 22.54 | 0.00 | 0.00 | 2.57 |
26 | 27 | 3.993584 | ACGGCCGGCGTCAAAGTA | 61.994 | 61.111 | 31.76 | 0.00 | 0.00 | 2.24 |
29 | 30 | 4.690719 | ATCACGGCCGGCGTCAAA | 62.691 | 61.111 | 31.76 | 6.61 | 0.00 | 2.69 |
30 | 31 | 4.690719 | AATCACGGCCGGCGTCAA | 62.691 | 61.111 | 31.76 | 9.25 | 0.00 | 3.18 |
31 | 32 | 4.690719 | AAATCACGGCCGGCGTCA | 62.691 | 61.111 | 31.76 | 4.91 | 0.00 | 4.35 |
32 | 33 | 4.160635 | CAAATCACGGCCGGCGTC | 62.161 | 66.667 | 31.76 | 6.47 | 0.00 | 5.19 |
33 | 34 | 4.690719 | TCAAATCACGGCCGGCGT | 62.691 | 61.111 | 31.76 | 19.06 | 0.00 | 5.68 |
34 | 35 | 4.160635 | GTCAAATCACGGCCGGCG | 62.161 | 66.667 | 31.76 | 20.52 | 0.00 | 6.46 |
35 | 36 | 3.810896 | GGTCAAATCACGGCCGGC | 61.811 | 66.667 | 31.76 | 21.18 | 0.00 | 6.13 |
36 | 37 | 3.131478 | GGGTCAAATCACGGCCGG | 61.131 | 66.667 | 31.76 | 18.67 | 0.00 | 6.13 |
37 | 38 | 3.496131 | CGGGTCAAATCACGGCCG | 61.496 | 66.667 | 26.86 | 26.86 | 0.00 | 6.13 |
38 | 39 | 2.046700 | TCGGGTCAAATCACGGCC | 60.047 | 61.111 | 0.00 | 0.00 | 34.76 | 6.13 |
39 | 40 | 1.375523 | ACTCGGGTCAAATCACGGC | 60.376 | 57.895 | 0.00 | 0.00 | 34.76 | 5.68 |
40 | 41 | 1.019278 | CCACTCGGGTCAAATCACGG | 61.019 | 60.000 | 0.00 | 0.00 | 34.76 | 4.94 |
41 | 42 | 2.456000 | CCACTCGGGTCAAATCACG | 58.544 | 57.895 | 0.00 | 0.00 | 35.37 | 4.35 |
51 | 52 | 3.939066 | AGAAAGTAATTGACCACTCGGG | 58.061 | 45.455 | 0.00 | 0.00 | 44.81 | 5.14 |
52 | 53 | 4.378459 | GCAAGAAAGTAATTGACCACTCGG | 60.378 | 45.833 | 0.00 | 0.00 | 38.77 | 4.63 |
53 | 54 | 4.452455 | AGCAAGAAAGTAATTGACCACTCG | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
54 | 55 | 5.948992 | AGCAAGAAAGTAATTGACCACTC | 57.051 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
55 | 56 | 7.665559 | TCAATAGCAAGAAAGTAATTGACCACT | 59.334 | 33.333 | 0.00 | 0.00 | 30.59 | 4.00 |
56 | 57 | 7.816640 | TCAATAGCAAGAAAGTAATTGACCAC | 58.183 | 34.615 | 0.00 | 0.00 | 30.59 | 4.16 |
57 | 58 | 7.665559 | ACTCAATAGCAAGAAAGTAATTGACCA | 59.334 | 33.333 | 0.00 | 0.00 | 31.87 | 4.02 |
58 | 59 | 8.045176 | ACTCAATAGCAAGAAAGTAATTGACC | 57.955 | 34.615 | 0.00 | 0.00 | 31.87 | 4.02 |
59 | 60 | 9.548208 | GAACTCAATAGCAAGAAAGTAATTGAC | 57.452 | 33.333 | 0.00 | 0.00 | 31.87 | 3.18 |
60 | 61 | 9.283768 | TGAACTCAATAGCAAGAAAGTAATTGA | 57.716 | 29.630 | 0.00 | 0.00 | 33.59 | 2.57 |
63 | 64 | 9.678260 | AGATGAACTCAATAGCAAGAAAGTAAT | 57.322 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
64 | 65 | 9.507329 | AAGATGAACTCAATAGCAAGAAAGTAA | 57.493 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
65 | 66 | 9.507329 | AAAGATGAACTCAATAGCAAGAAAGTA | 57.493 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
66 | 67 | 7.992754 | AAGATGAACTCAATAGCAAGAAAGT | 57.007 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
67 | 68 | 9.688592 | AAAAAGATGAACTCAATAGCAAGAAAG | 57.311 | 29.630 | 0.00 | 0.00 | 0.00 | 2.62 |
68 | 69 | 9.467258 | CAAAAAGATGAACTCAATAGCAAGAAA | 57.533 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
69 | 70 | 8.084073 | CCAAAAAGATGAACTCAATAGCAAGAA | 58.916 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
70 | 71 | 7.596494 | CCAAAAAGATGAACTCAATAGCAAGA | 58.404 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
71 | 72 | 6.309737 | GCCAAAAAGATGAACTCAATAGCAAG | 59.690 | 38.462 | 0.00 | 0.00 | 0.00 | 4.01 |
72 | 73 | 6.158598 | GCCAAAAAGATGAACTCAATAGCAA | 58.841 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
73 | 74 | 5.243507 | TGCCAAAAAGATGAACTCAATAGCA | 59.756 | 36.000 | 0.00 | 0.00 | 0.00 | 3.49 |
74 | 75 | 5.713025 | TGCCAAAAAGATGAACTCAATAGC | 58.287 | 37.500 | 0.00 | 0.00 | 0.00 | 2.97 |
75 | 76 | 7.816031 | ACATTGCCAAAAAGATGAACTCAATAG | 59.184 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
76 | 77 | 7.669427 | ACATTGCCAAAAAGATGAACTCAATA | 58.331 | 30.769 | 0.00 | 0.00 | 0.00 | 1.90 |
77 | 78 | 6.527423 | ACATTGCCAAAAAGATGAACTCAAT | 58.473 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
78 | 79 | 5.916318 | ACATTGCCAAAAAGATGAACTCAA | 58.084 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
79 | 80 | 5.534207 | ACATTGCCAAAAAGATGAACTCA | 57.466 | 34.783 | 0.00 | 0.00 | 0.00 | 3.41 |
80 | 81 | 9.076596 | GTATTACATTGCCAAAAAGATGAACTC | 57.923 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
81 | 82 | 8.034804 | GGTATTACATTGCCAAAAAGATGAACT | 58.965 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
82 | 83 | 7.277760 | GGGTATTACATTGCCAAAAAGATGAAC | 59.722 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
83 | 84 | 7.327214 | GGGTATTACATTGCCAAAAAGATGAA | 58.673 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
84 | 85 | 6.405286 | CGGGTATTACATTGCCAAAAAGATGA | 60.405 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
85 | 86 | 5.748152 | CGGGTATTACATTGCCAAAAAGATG | 59.252 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
86 | 87 | 5.420739 | ACGGGTATTACATTGCCAAAAAGAT | 59.579 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
87 | 88 | 4.767928 | ACGGGTATTACATTGCCAAAAAGA | 59.232 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
88 | 89 | 5.066968 | ACGGGTATTACATTGCCAAAAAG | 57.933 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
89 | 90 | 5.470047 | AACGGGTATTACATTGCCAAAAA | 57.530 | 34.783 | 0.00 | 0.00 | 0.00 | 1.94 |
90 | 91 | 4.379603 | CGAACGGGTATTACATTGCCAAAA | 60.380 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
91 | 92 | 3.127203 | CGAACGGGTATTACATTGCCAAA | 59.873 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
92 | 93 | 2.678836 | CGAACGGGTATTACATTGCCAA | 59.321 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
93 | 94 | 2.281517 | CGAACGGGTATTACATTGCCA | 58.718 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
94 | 95 | 2.282407 | ACGAACGGGTATTACATTGCC | 58.718 | 47.619 | 0.00 | 0.00 | 0.00 | 4.52 |
95 | 96 | 2.286025 | GGACGAACGGGTATTACATTGC | 59.714 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
96 | 97 | 3.523547 | TGGACGAACGGGTATTACATTG | 58.476 | 45.455 | 0.00 | 0.00 | 0.00 | 2.82 |
97 | 98 | 3.891422 | TGGACGAACGGGTATTACATT | 57.109 | 42.857 | 0.00 | 0.00 | 0.00 | 2.71 |
98 | 99 | 3.196254 | ACTTGGACGAACGGGTATTACAT | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
99 | 100 | 2.562298 | ACTTGGACGAACGGGTATTACA | 59.438 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
100 | 101 | 3.236632 | ACTTGGACGAACGGGTATTAC | 57.763 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
101 | 102 | 6.265196 | ACATATACTTGGACGAACGGGTATTA | 59.735 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
102 | 103 | 5.069516 | ACATATACTTGGACGAACGGGTATT | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
103 | 104 | 4.586001 | ACATATACTTGGACGAACGGGTAT | 59.414 | 41.667 | 0.00 | 0.00 | 0.00 | 2.73 |
104 | 105 | 3.953612 | ACATATACTTGGACGAACGGGTA | 59.046 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
105 | 106 | 2.762327 | ACATATACTTGGACGAACGGGT | 59.238 | 45.455 | 0.00 | 0.00 | 0.00 | 5.28 |
106 | 107 | 3.120792 | CACATATACTTGGACGAACGGG | 58.879 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
107 | 108 | 3.777478 | ACACATATACTTGGACGAACGG | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
108 | 109 | 6.308524 | TGTTAACACATATACTTGGACGAACG | 59.691 | 38.462 | 3.59 | 0.00 | 0.00 | 3.95 |
109 | 110 | 7.585286 | TGTTAACACATATACTTGGACGAAC | 57.415 | 36.000 | 3.59 | 0.00 | 0.00 | 3.95 |
110 | 111 | 7.656542 | TGTTGTTAACACATATACTTGGACGAA | 59.343 | 33.333 | 8.07 | 0.00 | 36.25 | 3.85 |
111 | 112 | 7.153315 | TGTTGTTAACACATATACTTGGACGA | 58.847 | 34.615 | 8.07 | 0.00 | 36.25 | 4.20 |
112 | 113 | 7.354025 | TGTTGTTAACACATATACTTGGACG | 57.646 | 36.000 | 8.07 | 0.00 | 36.25 | 4.79 |
113 | 114 | 7.241376 | GCTGTTGTTAACACATATACTTGGAC | 58.759 | 38.462 | 8.07 | 0.00 | 36.25 | 4.02 |
114 | 115 | 6.373216 | GGCTGTTGTTAACACATATACTTGGA | 59.627 | 38.462 | 8.07 | 0.00 | 36.25 | 3.53 |
115 | 116 | 6.551736 | GGCTGTTGTTAACACATATACTTGG | 58.448 | 40.000 | 8.07 | 0.65 | 36.25 | 3.61 |
116 | 117 | 6.091577 | TCGGCTGTTGTTAACACATATACTTG | 59.908 | 38.462 | 8.07 | 2.85 | 36.25 | 3.16 |
117 | 118 | 6.167685 | TCGGCTGTTGTTAACACATATACTT | 58.832 | 36.000 | 8.07 | 0.00 | 36.25 | 2.24 |
118 | 119 | 5.726397 | TCGGCTGTTGTTAACACATATACT | 58.274 | 37.500 | 8.07 | 0.00 | 36.25 | 2.12 |
119 | 120 | 6.411630 | TTCGGCTGTTGTTAACACATATAC | 57.588 | 37.500 | 8.07 | 4.06 | 36.25 | 1.47 |
120 | 121 | 6.402766 | GCTTTCGGCTGTTGTTAACACATATA | 60.403 | 38.462 | 8.07 | 0.00 | 36.25 | 0.86 |
121 | 122 | 5.619086 | GCTTTCGGCTGTTGTTAACACATAT | 60.619 | 40.000 | 8.07 | 0.00 | 36.25 | 1.78 |
122 | 123 | 4.319911 | GCTTTCGGCTGTTGTTAACACATA | 60.320 | 41.667 | 8.07 | 0.00 | 36.25 | 2.29 |
123 | 124 | 3.550030 | GCTTTCGGCTGTTGTTAACACAT | 60.550 | 43.478 | 8.07 | 0.00 | 36.25 | 3.21 |
124 | 125 | 2.223386 | GCTTTCGGCTGTTGTTAACACA | 60.223 | 45.455 | 8.07 | 8.98 | 36.25 | 3.72 |
125 | 126 | 2.381589 | GCTTTCGGCTGTTGTTAACAC | 58.618 | 47.619 | 8.07 | 4.61 | 36.25 | 3.32 |
126 | 127 | 1.335496 | GGCTTTCGGCTGTTGTTAACA | 59.665 | 47.619 | 3.59 | 3.59 | 41.46 | 2.41 |
127 | 128 | 1.335597 | GGGCTTTCGGCTGTTGTTAAC | 60.336 | 52.381 | 0.00 | 0.00 | 41.46 | 2.01 |
128 | 129 | 0.955905 | GGGCTTTCGGCTGTTGTTAA | 59.044 | 50.000 | 0.00 | 0.00 | 41.46 | 2.01 |
129 | 130 | 0.891904 | GGGGCTTTCGGCTGTTGTTA | 60.892 | 55.000 | 0.00 | 0.00 | 41.46 | 2.41 |
130 | 131 | 2.200337 | GGGGCTTTCGGCTGTTGTT | 61.200 | 57.895 | 0.00 | 0.00 | 41.46 | 2.83 |
131 | 132 | 2.597510 | GGGGCTTTCGGCTGTTGT | 60.598 | 61.111 | 0.00 | 0.00 | 41.46 | 3.32 |
132 | 133 | 3.737172 | CGGGGCTTTCGGCTGTTG | 61.737 | 66.667 | 0.00 | 0.00 | 41.46 | 3.33 |
133 | 134 | 1.906105 | TATCGGGGCTTTCGGCTGTT | 61.906 | 55.000 | 0.00 | 0.00 | 41.46 | 3.16 |
134 | 135 | 1.906105 | TTATCGGGGCTTTCGGCTGT | 61.906 | 55.000 | 0.00 | 0.00 | 41.46 | 4.40 |
135 | 136 | 0.535102 | ATTATCGGGGCTTTCGGCTG | 60.535 | 55.000 | 0.00 | 0.00 | 41.46 | 4.85 |
136 | 137 | 0.535102 | CATTATCGGGGCTTTCGGCT | 60.535 | 55.000 | 0.00 | 0.00 | 41.46 | 5.52 |
137 | 138 | 0.534203 | TCATTATCGGGGCTTTCGGC | 60.534 | 55.000 | 0.00 | 0.00 | 40.90 | 5.54 |
138 | 139 | 2.185004 | ATCATTATCGGGGCTTTCGG | 57.815 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
139 | 140 | 2.484264 | GGAATCATTATCGGGGCTTTCG | 59.516 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
140 | 141 | 3.486383 | TGGAATCATTATCGGGGCTTTC | 58.514 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
141 | 142 | 3.593442 | TGGAATCATTATCGGGGCTTT | 57.407 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
142 | 143 | 3.222603 | GTTGGAATCATTATCGGGGCTT | 58.777 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
143 | 144 | 2.174639 | TGTTGGAATCATTATCGGGGCT | 59.825 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
144 | 145 | 2.582052 | TGTTGGAATCATTATCGGGGC | 58.418 | 47.619 | 0.00 | 0.00 | 0.00 | 5.80 |
145 | 146 | 5.789643 | AATTGTTGGAATCATTATCGGGG | 57.210 | 39.130 | 0.00 | 0.00 | 0.00 | 5.73 |
146 | 147 | 5.463061 | GCAAATTGTTGGAATCATTATCGGG | 59.537 | 40.000 | 0.00 | 0.00 | 35.10 | 5.14 |
147 | 148 | 6.019640 | GTGCAAATTGTTGGAATCATTATCGG | 60.020 | 38.462 | 0.00 | 0.00 | 36.77 | 4.18 |
148 | 149 | 6.753279 | AGTGCAAATTGTTGGAATCATTATCG | 59.247 | 34.615 | 0.00 | 0.00 | 36.77 | 2.92 |
149 | 150 | 9.241317 | CTAGTGCAAATTGTTGGAATCATTATC | 57.759 | 33.333 | 0.00 | 0.00 | 36.77 | 1.75 |
150 | 151 | 8.752187 | ACTAGTGCAAATTGTTGGAATCATTAT | 58.248 | 29.630 | 0.00 | 0.00 | 36.77 | 1.28 |
151 | 152 | 8.121305 | ACTAGTGCAAATTGTTGGAATCATTA | 57.879 | 30.769 | 0.00 | 0.00 | 36.77 | 1.90 |
152 | 153 | 6.996509 | ACTAGTGCAAATTGTTGGAATCATT | 58.003 | 32.000 | 0.00 | 0.00 | 36.77 | 2.57 |
153 | 154 | 6.594788 | ACTAGTGCAAATTGTTGGAATCAT | 57.405 | 33.333 | 0.00 | 0.00 | 36.77 | 2.45 |
154 | 155 | 6.488344 | TGTACTAGTGCAAATTGTTGGAATCA | 59.512 | 34.615 | 11.58 | 0.00 | 36.77 | 2.57 |
155 | 156 | 6.908825 | TGTACTAGTGCAAATTGTTGGAATC | 58.091 | 36.000 | 11.58 | 0.00 | 36.77 | 2.52 |
156 | 157 | 6.892658 | TGTACTAGTGCAAATTGTTGGAAT | 57.107 | 33.333 | 11.58 | 0.00 | 36.77 | 3.01 |
157 | 158 | 6.701145 | TTGTACTAGTGCAAATTGTTGGAA | 57.299 | 33.333 | 22.12 | 0.00 | 36.77 | 3.53 |
158 | 159 | 6.701145 | TTTGTACTAGTGCAAATTGTTGGA | 57.299 | 33.333 | 28.46 | 10.01 | 39.58 | 3.53 |
166 | 167 | 9.991906 | ACTCTTAGTAATTTGTACTAGTGCAAA | 57.008 | 29.630 | 32.24 | 32.24 | 46.16 | 3.68 |
184 | 185 | 8.258708 | CCTGCCAACTAATAAACTACTCTTAGT | 58.741 | 37.037 | 0.00 | 0.00 | 40.55 | 2.24 |
185 | 186 | 8.475639 | TCCTGCCAACTAATAAACTACTCTTAG | 58.524 | 37.037 | 0.00 | 0.00 | 0.00 | 2.18 |
186 | 187 | 8.370266 | TCCTGCCAACTAATAAACTACTCTTA | 57.630 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
187 | 188 | 7.253905 | TCCTGCCAACTAATAAACTACTCTT | 57.746 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
188 | 189 | 6.869206 | TCCTGCCAACTAATAAACTACTCT | 57.131 | 37.500 | 0.00 | 0.00 | 0.00 | 3.24 |
189 | 190 | 7.278203 | GTCTTCCTGCCAACTAATAAACTACTC | 59.722 | 40.741 | 0.00 | 0.00 | 0.00 | 2.59 |
190 | 191 | 7.038231 | AGTCTTCCTGCCAACTAATAAACTACT | 60.038 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
191 | 192 | 7.104290 | AGTCTTCCTGCCAACTAATAAACTAC | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
192 | 193 | 7.253905 | AGTCTTCCTGCCAACTAATAAACTA | 57.746 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
193 | 194 | 6.128138 | AGTCTTCCTGCCAACTAATAAACT | 57.872 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
194 | 195 | 7.104290 | ACTAGTCTTCCTGCCAACTAATAAAC | 58.896 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
195 | 196 | 7.253905 | ACTAGTCTTCCTGCCAACTAATAAA | 57.746 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
196 | 197 | 6.869206 | ACTAGTCTTCCTGCCAACTAATAA | 57.131 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
197 | 198 | 6.869206 | AACTAGTCTTCCTGCCAACTAATA | 57.131 | 37.500 | 0.00 | 0.00 | 0.00 | 0.98 |
198 | 199 | 5.763876 | AACTAGTCTTCCTGCCAACTAAT | 57.236 | 39.130 | 0.00 | 0.00 | 0.00 | 1.73 |
281 | 285 | 3.070018 | CAACTAGTTCTCCTGCCAACTG | 58.930 | 50.000 | 4.77 | 0.00 | 34.60 | 3.16 |
293 | 297 | 3.057019 | TCATCGTGTGTGCAACTAGTTC | 58.943 | 45.455 | 4.77 | 1.77 | 38.04 | 3.01 |
294 | 298 | 3.106242 | TCATCGTGTGTGCAACTAGTT | 57.894 | 42.857 | 1.12 | 1.12 | 38.04 | 2.24 |
308 | 312 | 2.622942 | ACAAGCCAACAAACATCATCGT | 59.377 | 40.909 | 0.00 | 0.00 | 0.00 | 3.73 |
310 | 314 | 6.158598 | ACATTACAAGCCAACAAACATCATC | 58.841 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
311 | 315 | 6.100404 | ACATTACAAGCCAACAAACATCAT | 57.900 | 33.333 | 0.00 | 0.00 | 0.00 | 2.45 |
312 | 316 | 5.528043 | ACATTACAAGCCAACAAACATCA | 57.472 | 34.783 | 0.00 | 0.00 | 0.00 | 3.07 |
313 | 317 | 6.677913 | ACTACATTACAAGCCAACAAACATC | 58.322 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
315 | 319 | 5.825679 | AGACTACATTACAAGCCAACAAACA | 59.174 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
316 | 320 | 6.313744 | AGACTACATTACAAGCCAACAAAC | 57.686 | 37.500 | 0.00 | 0.00 | 0.00 | 2.93 |
319 | 408 | 6.354794 | ACTAGACTACATTACAAGCCAACA | 57.645 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
353 | 482 | 6.591001 | AGTTTTCCTGCCAACAAAACATTAT | 58.409 | 32.000 | 11.47 | 0.00 | 40.82 | 1.28 |
355 | 484 | 4.842574 | AGTTTTCCTGCCAACAAAACATT | 58.157 | 34.783 | 11.47 | 0.00 | 40.82 | 2.71 |
423 | 553 | 6.183360 | TGCCAACTAAACATAAATGTGTGTGT | 60.183 | 34.615 | 0.00 | 0.00 | 41.61 | 3.72 |
434 | 564 | 4.634012 | AGTGTCCTGCCAACTAAACATA | 57.366 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
473 | 603 | 1.444042 | CATTGCCGCGTCAATTGCA | 60.444 | 52.632 | 13.40 | 7.03 | 34.68 | 4.08 |
481 | 611 | 1.447838 | CTGGACTACATTGCCGCGT | 60.448 | 57.895 | 4.92 | 0.00 | 0.00 | 6.01 |
483 | 613 | 0.447801 | CAACTGGACTACATTGCCGC | 59.552 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
497 | 627 | 8.746922 | ACTAAATATCAATGTTTGTGCAACTG | 57.253 | 30.769 | 0.00 | 0.00 | 38.04 | 3.16 |
502 | 632 | 8.741101 | TGTCAACTAAATATCAATGTTTGTGC | 57.259 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
522 | 652 | 9.719355 | ACATATGTGTGTAACTAATTCTGTCAA | 57.281 | 29.630 | 7.78 | 0.00 | 37.14 | 3.18 |
525 | 655 | 9.719355 | TGAACATATGTGTGTAACTAATTCTGT | 57.281 | 29.630 | 9.63 | 0.00 | 38.92 | 3.41 |
531 | 661 | 7.934665 | ACCAACTGAACATATGTGTGTAACTAA | 59.065 | 33.333 | 9.63 | 0.00 | 38.92 | 2.24 |
680 | 1097 | 3.879295 | GCATATGTGTGTGCCAATAGTCT | 59.121 | 43.478 | 4.29 | 0.00 | 36.56 | 3.24 |
727 | 1225 | 3.409851 | AGCATCAATATGTGTGCAACG | 57.590 | 42.857 | 0.00 | 0.00 | 36.98 | 4.10 |
746 | 1244 | 3.378427 | GCCAAATAGTCCTGCCAACTAAG | 59.622 | 47.826 | 0.00 | 0.00 | 33.19 | 2.18 |
797 | 1300 | 3.809279 | TCAATGTGTGTGCAACTAGACTG | 59.191 | 43.478 | 0.00 | 0.00 | 38.04 | 3.51 |
888 | 1393 | 2.512485 | TCACCGTTAAAACTCTCGCA | 57.488 | 45.000 | 0.00 | 0.00 | 0.00 | 5.10 |
894 | 1399 | 6.488683 | TCAGATCCATTTTCACCGTTAAAACT | 59.511 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
980 | 1485 | 6.854091 | ATATTCCTCCTATTCGTCCCTTAC | 57.146 | 41.667 | 0.00 | 0.00 | 0.00 | 2.34 |
994 | 1499 | 2.162408 | GCCGCTGCATTAATATTCCTCC | 59.838 | 50.000 | 0.00 | 0.00 | 37.47 | 4.30 |
1052 | 1567 | 8.132362 | AGAAAAACACTGTTAATTAATCACGCA | 58.868 | 29.630 | 0.31 | 0.00 | 0.00 | 5.24 |
1077 | 1593 | 5.121454 | GCGATTAATCATTCCTCTGGCTAAG | 59.879 | 44.000 | 15.57 | 0.00 | 0.00 | 2.18 |
1085 | 1601 | 4.518217 | CGTGTTGCGATTAATCATTCCTC | 58.482 | 43.478 | 15.57 | 1.83 | 44.77 | 3.71 |
1194 | 1735 | 4.046462 | TCGATCCAATTCGAATCGGTTAC | 58.954 | 43.478 | 14.67 | 6.88 | 44.56 | 2.50 |
1208 | 1749 | 2.817258 | GTGAAATTGGGTGTCGATCCAA | 59.183 | 45.455 | 16.42 | 16.42 | 46.84 | 3.53 |
1215 | 1756 | 1.256812 | CAGGGGTGAAATTGGGTGTC | 58.743 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1228 | 1769 | 1.380302 | GGACATCTGTTGCAGGGGT | 59.620 | 57.895 | 0.00 | 0.00 | 31.51 | 4.95 |
1231 | 1772 | 0.679002 | CAGGGGACATCTGTTGCAGG | 60.679 | 60.000 | 0.00 | 0.00 | 31.51 | 4.85 |
1252 | 1794 | 3.450904 | TGAGCTACCTACCCAATCTGTT | 58.549 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
1260 | 1802 | 0.830648 | TGTGCATGAGCTACCTACCC | 59.169 | 55.000 | 0.00 | 0.00 | 42.74 | 3.69 |
1295 | 1837 | 0.816018 | TAAGAGAGAGCGAGGAGGCG | 60.816 | 60.000 | 0.00 | 0.00 | 38.18 | 5.52 |
1303 | 1845 | 3.914312 | TGTTGGAGTTTAAGAGAGAGCG | 58.086 | 45.455 | 0.00 | 0.00 | 0.00 | 5.03 |
1364 | 1907 | 3.052455 | TCAAGCAAGCCGTCTTCATTA | 57.948 | 42.857 | 0.00 | 0.00 | 0.00 | 1.90 |
1365 | 1908 | 1.896220 | TCAAGCAAGCCGTCTTCATT | 58.104 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1392 | 1935 | 4.595538 | ACGGCGAGCGAAACCACA | 62.596 | 61.111 | 16.62 | 0.00 | 0.00 | 4.17 |
1497 | 2040 | 2.089201 | CTGATGATGACCAGCTTTGCA | 58.911 | 47.619 | 0.00 | 0.00 | 31.20 | 4.08 |
1498 | 2041 | 1.404391 | CCTGATGATGACCAGCTTTGC | 59.596 | 52.381 | 0.00 | 0.00 | 31.20 | 3.68 |
1584 | 2127 | 0.179100 | CGCAGACAATCATCCTCCGT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1594 | 2137 | 0.957395 | CACCTCTTGCCGCAGACAAT | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 2.71 |
1596 | 2139 | 2.031012 | CACCTCTTGCCGCAGACA | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
1686 | 2229 | 2.360475 | GGGACTCAGCAGGTTGGC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.52 |
1697 | 2240 | 1.400737 | ATACGCAGGTACAGGGACTC | 58.599 | 55.000 | 8.30 | 0.00 | 34.60 | 3.36 |
1705 | 2248 | 3.824414 | ACAAGCAAAATACGCAGGTAC | 57.176 | 42.857 | 0.00 | 0.00 | 0.00 | 3.34 |
1706 | 2249 | 4.069304 | AGAACAAGCAAAATACGCAGGTA | 58.931 | 39.130 | 0.00 | 0.00 | 0.00 | 3.08 |
1707 | 2250 | 2.884639 | AGAACAAGCAAAATACGCAGGT | 59.115 | 40.909 | 0.00 | 0.00 | 0.00 | 4.00 |
1708 | 2251 | 3.559238 | AGAACAAGCAAAATACGCAGG | 57.441 | 42.857 | 0.00 | 0.00 | 0.00 | 4.85 |
1709 | 2252 | 4.787598 | AGAAGAACAAGCAAAATACGCAG | 58.212 | 39.130 | 0.00 | 0.00 | 0.00 | 5.18 |
1710 | 2253 | 4.829064 | AGAAGAACAAGCAAAATACGCA | 57.171 | 36.364 | 0.00 | 0.00 | 0.00 | 5.24 |
1711 | 2254 | 4.617223 | GGAAGAAGAACAAGCAAAATACGC | 59.383 | 41.667 | 0.00 | 0.00 | 0.00 | 4.42 |
1712 | 2255 | 6.002062 | AGGAAGAAGAACAAGCAAAATACG | 57.998 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
1713 | 2256 | 7.208225 | AGAGGAAGAAGAACAAGCAAAATAC | 57.792 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
1714 | 2257 | 7.721399 | AGAAGAGGAAGAAGAACAAGCAAAATA | 59.279 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
1720 | 2263 | 4.384940 | ACAGAAGAGGAAGAAGAACAAGC | 58.615 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
1724 | 2267 | 7.171630 | TGGTATACAGAAGAGGAAGAAGAAC | 57.828 | 40.000 | 5.01 | 0.00 | 0.00 | 3.01 |
1725 | 2268 | 7.979786 | ATGGTATACAGAAGAGGAAGAAGAA | 57.020 | 36.000 | 5.01 | 0.00 | 0.00 | 2.52 |
1736 | 2279 | 8.072567 | GCATGCTAGAAAAATGGTATACAGAAG | 58.927 | 37.037 | 11.37 | 0.00 | 0.00 | 2.85 |
1739 | 2282 | 6.262944 | TGGCATGCTAGAAAAATGGTATACAG | 59.737 | 38.462 | 18.92 | 0.00 | 0.00 | 2.74 |
1741 | 2284 | 6.438763 | GTGGCATGCTAGAAAAATGGTATAC | 58.561 | 40.000 | 18.92 | 0.00 | 0.00 | 1.47 |
1743 | 2286 | 4.342092 | GGTGGCATGCTAGAAAAATGGTAT | 59.658 | 41.667 | 18.92 | 0.00 | 0.00 | 2.73 |
1745 | 2288 | 2.497273 | GGTGGCATGCTAGAAAAATGGT | 59.503 | 45.455 | 18.92 | 0.00 | 0.00 | 3.55 |
1746 | 2289 | 2.480073 | CGGTGGCATGCTAGAAAAATGG | 60.480 | 50.000 | 18.92 | 0.00 | 0.00 | 3.16 |
1748 | 2291 | 2.722094 | TCGGTGGCATGCTAGAAAAAT | 58.278 | 42.857 | 18.92 | 0.00 | 0.00 | 1.82 |
1749 | 2292 | 2.192664 | TCGGTGGCATGCTAGAAAAA | 57.807 | 45.000 | 18.92 | 0.00 | 0.00 | 1.94 |
1751 | 2294 | 2.418368 | AATCGGTGGCATGCTAGAAA | 57.582 | 45.000 | 18.92 | 0.00 | 0.00 | 2.52 |
1752 | 2295 | 2.418368 | AAATCGGTGGCATGCTAGAA | 57.582 | 45.000 | 18.92 | 0.00 | 0.00 | 2.10 |
1753 | 2296 | 2.016318 | CAAAATCGGTGGCATGCTAGA | 58.984 | 47.619 | 18.92 | 11.98 | 0.00 | 2.43 |
1755 | 2298 | 1.102154 | CCAAAATCGGTGGCATGCTA | 58.898 | 50.000 | 18.92 | 9.16 | 0.00 | 3.49 |
1757 | 2300 | 0.179129 | CTCCAAAATCGGTGGCATGC | 60.179 | 55.000 | 9.90 | 9.90 | 35.99 | 4.06 |
1758 | 2301 | 0.179129 | GCTCCAAAATCGGTGGCATG | 60.179 | 55.000 | 0.00 | 0.00 | 35.99 | 4.06 |
1759 | 2302 | 1.322538 | GGCTCCAAAATCGGTGGCAT | 61.323 | 55.000 | 0.00 | 0.00 | 42.82 | 4.40 |
1760 | 2303 | 1.976474 | GGCTCCAAAATCGGTGGCA | 60.976 | 57.895 | 0.00 | 0.00 | 42.82 | 4.92 |
1761 | 2304 | 1.678970 | AGGCTCCAAAATCGGTGGC | 60.679 | 57.895 | 0.00 | 0.00 | 43.42 | 5.01 |
1762 | 2305 | 0.609131 | ACAGGCTCCAAAATCGGTGG | 60.609 | 55.000 | 0.00 | 0.00 | 37.51 | 4.61 |
1763 | 2306 | 0.523072 | CACAGGCTCCAAAATCGGTG | 59.477 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
1765 | 2308 | 1.508088 | GCACAGGCTCCAAAATCGG | 59.492 | 57.895 | 0.00 | 0.00 | 36.96 | 4.18 |
1766 | 2309 | 0.962356 | AGGCACAGGCTCCAAAATCG | 60.962 | 55.000 | 0.00 | 0.00 | 40.87 | 3.34 |
1767 | 2310 | 1.203287 | GAAGGCACAGGCTCCAAAATC | 59.797 | 52.381 | 0.00 | 0.00 | 37.50 | 2.17 |
1803 | 2372 | 4.064388 | AGCATTAAAACCTGCGCATTTTT | 58.936 | 34.783 | 22.59 | 23.80 | 43.17 | 1.94 |
1808 | 2377 | 5.766150 | AATATAGCATTAAAACCTGCGCA | 57.234 | 34.783 | 10.98 | 10.98 | 43.17 | 6.09 |
1841 | 2410 | 8.755696 | TTTGCATCTGTATTACATGGTTTTTC | 57.244 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
1944 | 2514 | 6.489603 | AGTACCATGGATAATTTGTCACCAA | 58.510 | 36.000 | 21.47 | 0.00 | 34.28 | 3.67 |
1945 | 2515 | 6.073447 | AGTACCATGGATAATTTGTCACCA | 57.927 | 37.500 | 21.47 | 0.00 | 35.09 | 4.17 |
1947 | 2517 | 7.826690 | ACAAAGTACCATGGATAATTTGTCAC | 58.173 | 34.615 | 27.95 | 11.06 | 43.55 | 3.67 |
1967 | 2537 | 9.591792 | TGACAGTTCAGATGATATCTTACAAAG | 57.408 | 33.333 | 3.98 | 0.00 | 37.58 | 2.77 |
1971 | 2541 | 9.979578 | AGAATGACAGTTCAGATGATATCTTAC | 57.020 | 33.333 | 3.98 | 0.00 | 37.58 | 2.34 |
1980 | 2550 | 8.189709 | TCGAATAAAGAATGACAGTTCAGATG | 57.810 | 34.615 | 0.00 | 0.00 | 34.35 | 2.90 |
1983 | 2553 | 7.427606 | GCAATCGAATAAAGAATGACAGTTCAG | 59.572 | 37.037 | 0.00 | 0.00 | 34.35 | 3.02 |
1984 | 2554 | 7.094848 | TGCAATCGAATAAAGAATGACAGTTCA | 60.095 | 33.333 | 0.00 | 0.00 | 35.73 | 3.18 |
1985 | 2555 | 7.217070 | GTGCAATCGAATAAAGAATGACAGTTC | 59.783 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
1986 | 2556 | 7.023575 | GTGCAATCGAATAAAGAATGACAGTT | 58.976 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
1988 | 2558 | 5.967674 | GGTGCAATCGAATAAAGAATGACAG | 59.032 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2102 | 2694 | 8.732746 | ACATTCTACAAAAAGTTCTACACACT | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 3.55 |
2122 | 2714 | 3.252458 | ACGGTGCCTTTGAGTAAACATTC | 59.748 | 43.478 | 0.00 | 0.00 | 0.00 | 2.67 |
2123 | 2715 | 3.004315 | CACGGTGCCTTTGAGTAAACATT | 59.996 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
2124 | 2716 | 2.552315 | CACGGTGCCTTTGAGTAAACAT | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
2125 | 2717 | 1.944024 | CACGGTGCCTTTGAGTAAACA | 59.056 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2126 | 2718 | 1.944709 | ACACGGTGCCTTTGAGTAAAC | 59.055 | 47.619 | 8.30 | 0.00 | 0.00 | 2.01 |
2127 | 2719 | 2.335316 | ACACGGTGCCTTTGAGTAAA | 57.665 | 45.000 | 8.30 | 0.00 | 0.00 | 2.01 |
2128 | 2720 | 2.335316 | AACACGGTGCCTTTGAGTAA | 57.665 | 45.000 | 8.30 | 0.00 | 0.00 | 2.24 |
2129 | 2721 | 3.132925 | GTTAACACGGTGCCTTTGAGTA | 58.867 | 45.455 | 8.30 | 0.00 | 0.00 | 2.59 |
2130 | 2722 | 1.944709 | GTTAACACGGTGCCTTTGAGT | 59.055 | 47.619 | 8.30 | 0.00 | 0.00 | 3.41 |
2131 | 2723 | 1.265905 | GGTTAACACGGTGCCTTTGAG | 59.734 | 52.381 | 8.30 | 0.00 | 0.00 | 3.02 |
2132 | 2724 | 1.134037 | AGGTTAACACGGTGCCTTTGA | 60.134 | 47.619 | 8.30 | 0.00 | 0.00 | 2.69 |
2135 | 2727 | 0.470766 | TCAGGTTAACACGGTGCCTT | 59.529 | 50.000 | 8.30 | 0.00 | 0.00 | 4.35 |
2136 | 2728 | 0.034896 | CTCAGGTTAACACGGTGCCT | 59.965 | 55.000 | 8.30 | 3.54 | 0.00 | 4.75 |
2138 | 2730 | 1.798813 | CTTCTCAGGTTAACACGGTGC | 59.201 | 52.381 | 8.30 | 0.00 | 0.00 | 5.01 |
2139 | 2731 | 1.798813 | GCTTCTCAGGTTAACACGGTG | 59.201 | 52.381 | 8.10 | 6.58 | 0.00 | 4.94 |
2140 | 2732 | 1.414919 | TGCTTCTCAGGTTAACACGGT | 59.585 | 47.619 | 8.10 | 0.00 | 0.00 | 4.83 |
2142 | 2734 | 1.461127 | GCTGCTTCTCAGGTTAACACG | 59.539 | 52.381 | 8.10 | 0.00 | 43.06 | 4.49 |
2143 | 2735 | 2.224314 | GTGCTGCTTCTCAGGTTAACAC | 59.776 | 50.000 | 8.10 | 0.00 | 43.06 | 3.32 |
2144 | 2736 | 2.158827 | TGTGCTGCTTCTCAGGTTAACA | 60.159 | 45.455 | 8.10 | 0.00 | 43.06 | 2.41 |
2145 | 2737 | 2.481952 | CTGTGCTGCTTCTCAGGTTAAC | 59.518 | 50.000 | 0.00 | 0.00 | 43.06 | 2.01 |
2146 | 2738 | 2.104792 | ACTGTGCTGCTTCTCAGGTTAA | 59.895 | 45.455 | 0.00 | 0.00 | 43.06 | 2.01 |
2147 | 2739 | 1.694150 | ACTGTGCTGCTTCTCAGGTTA | 59.306 | 47.619 | 0.00 | 0.00 | 43.06 | 2.85 |
2148 | 2740 | 0.471617 | ACTGTGCTGCTTCTCAGGTT | 59.528 | 50.000 | 0.00 | 0.00 | 43.06 | 3.50 |
2150 | 2742 | 0.321021 | AGACTGTGCTGCTTCTCAGG | 59.679 | 55.000 | 0.00 | 0.00 | 43.06 | 3.86 |
2151 | 2743 | 1.270199 | ACAGACTGTGCTGCTTCTCAG | 60.270 | 52.381 | 7.47 | 7.11 | 45.62 | 3.35 |
2155 | 2747 | 4.552166 | TTTTTACAGACTGTGCTGCTTC | 57.448 | 40.909 | 18.58 | 0.00 | 39.51 | 3.86 |
2156 | 2748 | 4.580167 | TCATTTTTACAGACTGTGCTGCTT | 59.420 | 37.500 | 18.58 | 0.00 | 39.51 | 3.91 |
2157 | 2749 | 4.023707 | GTCATTTTTACAGACTGTGCTGCT | 60.024 | 41.667 | 18.58 | 0.00 | 39.51 | 4.24 |
2158 | 2750 | 4.222114 | GTCATTTTTACAGACTGTGCTGC | 58.778 | 43.478 | 18.58 | 0.00 | 39.51 | 5.25 |
2159 | 2751 | 4.211164 | TCGTCATTTTTACAGACTGTGCTG | 59.789 | 41.667 | 18.58 | 8.06 | 41.63 | 4.41 |
2160 | 2752 | 4.377021 | TCGTCATTTTTACAGACTGTGCT | 58.623 | 39.130 | 18.58 | 0.00 | 0.00 | 4.40 |
2162 | 2754 | 6.712241 | AGATCGTCATTTTTACAGACTGTG | 57.288 | 37.500 | 18.58 | 0.13 | 0.00 | 3.66 |
2163 | 2755 | 7.116948 | CAGAAGATCGTCATTTTTACAGACTGT | 59.883 | 37.037 | 13.68 | 13.68 | 0.00 | 3.55 |
2165 | 2757 | 7.378966 | TCAGAAGATCGTCATTTTTACAGACT | 58.621 | 34.615 | 11.35 | 0.00 | 0.00 | 3.24 |
2187 | 2933 | 2.005451 | GTGTACCAGCAGAAGCATCAG | 58.995 | 52.381 | 0.00 | 0.00 | 45.49 | 2.90 |
2245 | 2991 | 2.061028 | GCTTTGCTTTCGTTCCCATTG | 58.939 | 47.619 | 0.00 | 0.00 | 0.00 | 2.82 |
2247 | 2993 | 1.327303 | TGCTTTGCTTTCGTTCCCAT | 58.673 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2250 | 2996 | 2.226437 | TCTGATGCTTTGCTTTCGTTCC | 59.774 | 45.455 | 0.00 | 0.00 | 0.00 | 3.62 |
2253 | 2999 | 3.550842 | GGTTTCTGATGCTTTGCTTTCGT | 60.551 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
2254 | 3000 | 2.982470 | GGTTTCTGATGCTTTGCTTTCG | 59.018 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
2255 | 3001 | 4.248691 | AGGTTTCTGATGCTTTGCTTTC | 57.751 | 40.909 | 0.00 | 0.00 | 0.00 | 2.62 |
2256 | 3002 | 4.502087 | GGAAGGTTTCTGATGCTTTGCTTT | 60.502 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2283 | 3055 | 2.584236 | TCCTCTATTCAGGCGTAGACC | 58.416 | 52.381 | 0.00 | 0.00 | 31.70 | 3.85 |
2286 | 3058 | 5.241949 | ACTTGTATCCTCTATTCAGGCGTAG | 59.758 | 44.000 | 0.00 | 0.00 | 32.91 | 3.51 |
2287 | 3059 | 5.138276 | ACTTGTATCCTCTATTCAGGCGTA | 58.862 | 41.667 | 0.00 | 0.00 | 32.91 | 4.42 |
2288 | 3060 | 3.961408 | ACTTGTATCCTCTATTCAGGCGT | 59.039 | 43.478 | 0.00 | 0.00 | 32.91 | 5.68 |
2289 | 3061 | 4.592485 | ACTTGTATCCTCTATTCAGGCG | 57.408 | 45.455 | 0.00 | 0.00 | 32.91 | 5.52 |
2318 | 3146 | 8.988060 | TCAATGTGGACCTCATTAGAGTATTTA | 58.012 | 33.333 | 18.88 | 0.00 | 40.40 | 1.40 |
2324 | 3152 | 6.422100 | CGTTATCAATGTGGACCTCATTAGAG | 59.578 | 42.308 | 18.88 | 9.35 | 41.72 | 2.43 |
2325 | 3153 | 6.127168 | ACGTTATCAATGTGGACCTCATTAGA | 60.127 | 38.462 | 18.88 | 17.55 | 34.34 | 2.10 |
2326 | 3154 | 6.049149 | ACGTTATCAATGTGGACCTCATTAG | 58.951 | 40.000 | 18.88 | 13.90 | 34.34 | 1.73 |
2327 | 3155 | 5.984725 | ACGTTATCAATGTGGACCTCATTA | 58.015 | 37.500 | 18.88 | 9.96 | 34.34 | 1.90 |
2328 | 3156 | 4.843728 | ACGTTATCAATGTGGACCTCATT | 58.156 | 39.130 | 14.67 | 14.67 | 36.16 | 2.57 |
2362 | 3196 | 2.677836 | GTTTGGCGATGCAGTTCAGATA | 59.322 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.