Multiple sequence alignment - TraesCS6D01G214900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G214900 chr6D 100.000 5235 0 0 1 5235 305185484 305190718 0.000000e+00 9668.0
1 TraesCS6D01G214900 chr6D 91.324 219 14 2 2157 2373 305187119 305187334 1.430000e-75 294.0
2 TraesCS6D01G214900 chr6D 91.324 219 14 2 1636 1851 305187640 305187856 1.430000e-75 294.0
3 TraesCS6D01G214900 chr6D 80.153 262 21 15 2215 2446 305187359 305187619 3.240000e-37 167.0
4 TraesCS6D01G214900 chr6D 80.153 262 21 15 1876 2136 305187698 305187929 3.240000e-37 167.0
5 TraesCS6D01G214900 chr6D 80.571 175 33 1 516 690 18695527 18695354 3.290000e-27 134.0
6 TraesCS6D01G214900 chr6D 85.385 130 11 4 1876 2005 305187176 305187297 1.530000e-25 128.0
7 TraesCS6D01G214900 chr6D 85.385 130 11 4 1693 1814 305187359 305187488 1.530000e-25 128.0
8 TraesCS6D01G214900 chr6A 95.770 3593 88 23 759 4342 409383498 409379961 0.000000e+00 5734.0
9 TraesCS6D01G214900 chr6A 88.849 843 35 19 4330 5158 409380007 409379210 0.000000e+00 981.0
10 TraesCS6D01G214900 chr6A 93.088 217 12 1 2157 2373 409382635 409382422 1.090000e-81 315.0
11 TraesCS6D01G214900 chr6A 91.705 217 17 1 1636 1851 409382116 409381900 3.060000e-77 300.0
12 TraesCS6D01G214900 chr6A 81.008 258 18 15 2218 2445 409382394 409382138 5.390000e-40 176.0
13 TraesCS6D01G214900 chr6A 79.537 259 22 15 1879 2136 409382055 409381827 7.020000e-34 156.0
14 TraesCS6D01G214900 chr6A 80.208 192 34 4 260 448 72982919 72982729 1.970000e-29 141.0
15 TraesCS6D01G214900 chr6A 85.039 127 11 6 1696 1814 409382394 409382268 7.120000e-24 122.0
16 TraesCS6D01G214900 chr6A 89.773 88 3 4 4647 4732 547829554 547829637 1.990000e-19 108.0
17 TraesCS6D01G214900 chr6A 100.000 30 0 0 191 220 471883117 471883146 7.320000e-04 56.5
18 TraesCS6D01G214900 chr6A 100.000 29 0 0 5207 5235 318748164 318748136 3.000000e-03 54.7
19 TraesCS6D01G214900 chr6A 100.000 28 0 0 193 220 199463542 199463515 9.000000e-03 52.8
20 TraesCS6D01G214900 chr6A 100.000 28 0 0 193 220 446792530 446792557 9.000000e-03 52.8
21 TraesCS6D01G214900 chr6B 94.206 3521 133 29 760 4277 471510788 471507336 0.000000e+00 5306.0
22 TraesCS6D01G214900 chr6B 91.476 481 17 4 4738 5210 471506979 471506515 1.590000e-179 640.0
23 TraesCS6D01G214900 chr6B 94.398 357 10 4 4353 4707 471507325 471506977 1.660000e-149 540.0
24 TraesCS6D01G214900 chr6B 92.593 216 14 1 1636 1851 471509451 471509238 5.090000e-80 309.0
25 TraesCS6D01G214900 chr6B 84.591 318 42 7 450 766 626219327 626219638 5.090000e-80 309.0
26 TraesCS6D01G214900 chr6B 89.401 217 20 1 2157 2373 471509935 471509722 2.400000e-68 270.0
27 TraesCS6D01G214900 chr6B 80.309 259 20 18 1879 2136 471509393 471509165 3.240000e-37 167.0
28 TraesCS6D01G214900 chr6B 90.909 88 4 3 4647 4732 601883786 601883871 1.190000e-21 115.0
29 TraesCS6D01G214900 chr6B 84.746 118 10 4 1888 2005 471509868 471509759 1.540000e-20 111.0
30 TraesCS6D01G214900 chr5D 84.984 313 40 7 450 757 3232170 3231860 1.420000e-80 311.0
31 TraesCS6D01G214900 chr5D 85.882 85 10 2 4647 4729 297499910 297499826 7.220000e-14 89.8
32 TraesCS6D01G214900 chr5D 100.000 29 0 0 191 219 398091584 398091556 3.000000e-03 54.7
33 TraesCS6D01G214900 chr5D 100.000 28 0 0 191 218 116071137 116071164 9.000000e-03 52.8
34 TraesCS6D01G214900 chr7B 84.713 314 41 5 450 757 600830865 600831177 1.830000e-79 307.0
35 TraesCS6D01G214900 chr7B 100.000 29 0 0 190 218 519539418 519539446 3.000000e-03 54.7
36 TraesCS6D01G214900 chr4A 84.839 310 39 7 454 757 680367353 680367660 6.590000e-79 305.0
37 TraesCS6D01G214900 chr4A 83.923 311 46 3 450 757 730386404 730386095 1.430000e-75 294.0
38 TraesCS6D01G214900 chr4A 87.097 62 7 1 390 450 738850584 738850645 9.410000e-08 69.4
39 TraesCS6D01G214900 chr2B 84.444 315 41 5 450 757 21865960 21866273 2.370000e-78 303.0
40 TraesCS6D01G214900 chr2B 84.494 316 38 9 450 757 154243383 154243071 8.520000e-78 302.0
41 TraesCS6D01G214900 chr2B 79.512 205 37 3 245 447 794571521 794571722 1.970000e-29 141.0
42 TraesCS6D01G214900 chr7D 84.345 313 40 7 450 757 613867304 613867612 1.100000e-76 298.0
43 TraesCS6D01G214900 chr7D 83.699 319 44 7 450 760 461122721 461122403 1.430000e-75 294.0
44 TraesCS6D01G214900 chr7D 78.125 96 19 1 246 339 524253735 524253830 5.660000e-05 60.2
45 TraesCS6D01G214900 chr3B 81.776 214 37 2 237 448 60415959 60415746 1.500000e-40 178.0
46 TraesCS6D01G214900 chr1B 80.435 230 37 7 226 450 397408471 397408697 9.020000e-38 169.0
47 TraesCS6D01G214900 chr4B 79.091 220 31 10 223 437 647732766 647732975 2.540000e-28 137.0
48 TraesCS6D01G214900 chr5A 78.636 220 36 10 237 449 645768385 645768600 9.140000e-28 135.0
49 TraesCS6D01G214900 chr5A 81.720 93 13 4 221 311 639091965 639092055 2.020000e-09 75.0
50 TraesCS6D01G214900 chr2A 82.353 136 18 6 315 448 5689210 5689079 4.280000e-21 113.0
51 TraesCS6D01G214900 chr3D 88.506 87 6 4 4647 4731 75358687 75358603 9.270000e-18 102.0
52 TraesCS6D01G214900 chr3D 87.671 73 9 0 260 332 333995304 333995376 9.340000e-13 86.1
53 TraesCS6D01G214900 chr1A 87.500 88 8 3 4646 4730 381307555 381307468 1.200000e-16 99.0
54 TraesCS6D01G214900 chr5B 86.905 84 10 1 4647 4729 337831161 337831078 5.580000e-15 93.5
55 TraesCS6D01G214900 chr5B 88.525 61 7 0 237 297 322327483 322327423 2.020000e-09 75.0
56 TraesCS6D01G214900 chrUn 86.207 87 8 3 4646 4730 11032399 11032315 2.010000e-14 91.6
57 TraesCS6D01G214900 chr3A 86.047 86 9 3 4647 4730 521635881 521635797 7.220000e-14 89.8
58 TraesCS6D01G214900 chr3A 95.349 43 2 0 406 448 653848203 653848161 9.410000e-08 69.4
59 TraesCS6D01G214900 chr3A 94.444 36 1 1 187 221 546695053 546695088 3.000000e-03 54.7
60 TraesCS6D01G214900 chr7A 94.286 35 2 0 187 221 521948932 521948966 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G214900 chr6D 305185484 305190718 5234 False 1549.428571 9668 87.674857 1 5235 7 chr6D.!!$F1 5234
1 TraesCS6D01G214900 chr6A 409379210 409383498 4288 True 1112.000000 5734 87.856571 759 5158 7 chr6A.!!$R4 4399
2 TraesCS6D01G214900 chr6B 471506515 471510788 4273 True 1049.000000 5306 89.589857 760 5210 7 chr6B.!!$R1 4450

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 708 0.034574 TGCACCACTTGTCACAACCT 60.035 50.000 0.00 0.00 0.00 3.50 F
708 709 0.381801 GCACCACTTGTCACAACCTG 59.618 55.000 0.00 0.00 0.00 4.00 F
711 712 0.947244 CCACTTGTCACAACCTGAGC 59.053 55.000 0.00 0.00 0.00 4.26 F
717 718 1.209261 TGTCACAACCTGAGCAGTTGA 59.791 47.619 10.38 3.38 32.90 3.18 F
723 724 1.709578 ACCTGAGCAGTTGAGAGTGA 58.290 50.000 0.00 0.00 0.00 3.41 F
1017 1022 2.163010 CAGCATGGCGTTTCTCTTCAAT 59.837 45.455 0.00 0.00 0.00 2.57 F
1125 1130 2.225068 ACCAACATCGATTAGCCTCG 57.775 50.000 0.00 0.00 39.99 4.63 F
1200 1205 2.502068 ATGTGGGAGGGAGATGATGA 57.498 50.000 0.00 0.00 0.00 2.92 F
3842 3851 2.600729 CCCCTGCAGAAGAGTGGCT 61.601 63.158 17.39 0.00 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1816 1824 2.102252 GAGGCTTGATCCTTCAGTCGAT 59.898 50.000 0.00 0.00 36.38 3.59 R
2795 2803 6.518369 CGAGCCTAATTTGGATGATACAGGTA 60.518 42.308 10.34 0.00 0.00 3.08 R
2883 2891 6.100004 TCTAAAGTATCTTTGGTCGCTGAAG 58.900 40.000 5.19 0.00 0.00 3.02 R
3111 3120 6.898041 TCAAAGAAACCGTGAAAGTATGATG 58.102 36.000 0.00 0.00 0.00 3.07 R
3433 3442 4.572985 TTCAGTTCGAGTTAAAGGTCGA 57.427 40.909 2.56 2.56 43.25 4.20 R
3643 3652 1.009078 GATAGCTGTTGCACGCATCA 58.991 50.000 0.00 3.00 42.74 3.07 R
3842 3851 2.102252 GCACATCCCCAAAGTTTTCACA 59.898 45.455 0.00 0.00 0.00 3.58 R
3853 3862 1.303236 CCGTTCAAGCACATCCCCA 60.303 57.895 0.00 0.00 0.00 4.96 R
4768 4785 0.174845 TACTCCACGGCAGGAAATCG 59.825 55.000 0.00 0.00 37.20 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.087248 AAGGATCACTTGGGGGTGG 58.913 57.895 0.00 0.00 38.21 4.61
19 20 1.509548 AAGGATCACTTGGGGGTGGG 61.510 60.000 0.00 0.00 38.21 4.61
20 21 2.043953 GATCACTTGGGGGTGGGC 60.044 66.667 0.00 0.00 37.75 5.36
21 22 2.535317 ATCACTTGGGGGTGGGCT 60.535 61.111 0.00 0.00 37.75 5.19
22 23 1.230149 ATCACTTGGGGGTGGGCTA 60.230 57.895 0.00 0.00 37.75 3.93
23 24 0.849094 ATCACTTGGGGGTGGGCTAA 60.849 55.000 0.00 0.00 37.75 3.09
24 25 1.000896 CACTTGGGGGTGGGCTAAG 60.001 63.158 0.00 0.00 33.95 2.18
25 26 1.151677 ACTTGGGGGTGGGCTAAGA 60.152 57.895 0.00 0.00 0.00 2.10
26 27 1.208165 ACTTGGGGGTGGGCTAAGAG 61.208 60.000 0.00 0.00 0.00 2.85
27 28 2.558380 CTTGGGGGTGGGCTAAGAGC 62.558 65.000 0.00 0.00 41.46 4.09
28 29 4.176752 GGGGGTGGGCTAAGAGCG 62.177 72.222 0.00 0.00 43.62 5.03
46 47 4.111016 CACAGCCGCTGCCACATG 62.111 66.667 20.56 6.91 38.69 3.21
47 48 4.648626 ACAGCCGCTGCCACATGT 62.649 61.111 20.56 0.00 38.69 3.21
48 49 3.807538 CAGCCGCTGCCACATGTC 61.808 66.667 7.61 0.00 38.69 3.06
49 50 4.334118 AGCCGCTGCCACATGTCA 62.334 61.111 0.00 0.00 38.69 3.58
50 51 4.107051 GCCGCTGCCACATGTCAC 62.107 66.667 0.00 0.00 0.00 3.67
51 52 3.792047 CCGCTGCCACATGTCACG 61.792 66.667 0.00 0.00 0.00 4.35
52 53 4.450122 CGCTGCCACATGTCACGC 62.450 66.667 0.00 0.00 0.00 5.34
53 54 3.052082 GCTGCCACATGTCACGCT 61.052 61.111 0.00 0.00 0.00 5.07
54 55 3.031964 GCTGCCACATGTCACGCTC 62.032 63.158 0.00 0.00 0.00 5.03
55 56 1.375140 CTGCCACATGTCACGCTCT 60.375 57.895 0.00 0.00 0.00 4.09
56 57 1.632948 CTGCCACATGTCACGCTCTG 61.633 60.000 0.00 0.00 0.00 3.35
57 58 2.393768 GCCACATGTCACGCTCTGG 61.394 63.158 0.00 0.00 0.00 3.86
58 59 1.293179 CCACATGTCACGCTCTGGA 59.707 57.895 0.00 0.00 0.00 3.86
59 60 0.107993 CCACATGTCACGCTCTGGAT 60.108 55.000 0.00 0.00 0.00 3.41
60 61 1.004595 CACATGTCACGCTCTGGATG 58.995 55.000 0.00 0.00 0.00 3.51
61 62 0.742281 ACATGTCACGCTCTGGATGC 60.742 55.000 0.00 0.00 0.00 3.91
62 63 0.461516 CATGTCACGCTCTGGATGCT 60.462 55.000 0.00 0.00 0.00 3.79
63 64 1.114627 ATGTCACGCTCTGGATGCTA 58.885 50.000 0.00 0.00 0.00 3.49
64 65 0.173481 TGTCACGCTCTGGATGCTAC 59.827 55.000 0.00 0.00 0.00 3.58
65 66 0.528684 GTCACGCTCTGGATGCTACC 60.529 60.000 0.00 0.00 0.00 3.18
66 67 0.684479 TCACGCTCTGGATGCTACCT 60.684 55.000 0.00 0.00 0.00 3.08
67 68 0.176680 CACGCTCTGGATGCTACCTT 59.823 55.000 0.00 0.00 0.00 3.50
68 69 0.905357 ACGCTCTGGATGCTACCTTT 59.095 50.000 0.00 0.00 0.00 3.11
69 70 1.293924 CGCTCTGGATGCTACCTTTG 58.706 55.000 0.00 0.00 0.00 2.77
70 71 1.673168 GCTCTGGATGCTACCTTTGG 58.327 55.000 0.00 0.00 0.00 3.28
71 72 1.210478 GCTCTGGATGCTACCTTTGGA 59.790 52.381 0.00 0.00 0.00 3.53
72 73 2.158696 GCTCTGGATGCTACCTTTGGAT 60.159 50.000 0.00 0.00 0.00 3.41
73 74 3.686691 GCTCTGGATGCTACCTTTGGATT 60.687 47.826 0.00 0.00 0.00 3.01
74 75 4.530875 CTCTGGATGCTACCTTTGGATTT 58.469 43.478 0.00 0.00 0.00 2.17
75 76 4.934356 TCTGGATGCTACCTTTGGATTTT 58.066 39.130 0.00 0.00 0.00 1.82
76 77 6.073447 TCTGGATGCTACCTTTGGATTTTA 57.927 37.500 0.00 0.00 0.00 1.52
77 78 6.672593 TCTGGATGCTACCTTTGGATTTTAT 58.327 36.000 0.00 0.00 0.00 1.40
78 79 7.125391 TCTGGATGCTACCTTTGGATTTTATT 58.875 34.615 0.00 0.00 0.00 1.40
79 80 7.619302 TCTGGATGCTACCTTTGGATTTTATTT 59.381 33.333 0.00 0.00 0.00 1.40
80 81 8.144862 TGGATGCTACCTTTGGATTTTATTTT 57.855 30.769 0.00 0.00 0.00 1.82
81 82 8.601546 TGGATGCTACCTTTGGATTTTATTTTT 58.398 29.630 0.00 0.00 0.00 1.94
100 101 5.803020 TTTTTACTTTTTGGCATGCGTTT 57.197 30.435 12.44 0.00 0.00 3.60
101 102 5.803020 TTTTACTTTTTGGCATGCGTTTT 57.197 30.435 12.44 0.00 0.00 2.43
102 103 5.396750 TTTACTTTTTGGCATGCGTTTTC 57.603 34.783 12.44 0.00 0.00 2.29
103 104 2.898705 ACTTTTTGGCATGCGTTTTCA 58.101 38.095 12.44 0.00 0.00 2.69
104 105 2.865551 ACTTTTTGGCATGCGTTTTCAG 59.134 40.909 12.44 5.78 0.00 3.02
105 106 1.216122 TTTTGGCATGCGTTTTCAGC 58.784 45.000 12.44 0.00 0.00 4.26
106 107 0.388659 TTTGGCATGCGTTTTCAGCT 59.611 45.000 12.44 0.00 35.28 4.24
107 108 0.318869 TTGGCATGCGTTTTCAGCTG 60.319 50.000 12.44 7.63 35.28 4.24
108 109 1.286880 GGCATGCGTTTTCAGCTGT 59.713 52.632 14.67 0.00 35.28 4.40
109 110 0.318955 GGCATGCGTTTTCAGCTGTT 60.319 50.000 14.67 0.00 35.28 3.16
110 111 1.068610 GGCATGCGTTTTCAGCTGTTA 60.069 47.619 14.67 0.00 35.28 2.41
111 112 2.606795 GGCATGCGTTTTCAGCTGTTAA 60.607 45.455 14.67 6.77 35.28 2.01
112 113 3.049206 GCATGCGTTTTCAGCTGTTAAA 58.951 40.909 14.67 12.49 35.28 1.52
113 114 3.489047 GCATGCGTTTTCAGCTGTTAAAA 59.511 39.130 14.67 11.22 35.28 1.52
114 115 4.606012 GCATGCGTTTTCAGCTGTTAAAAC 60.606 41.667 23.87 23.87 40.53 2.43
118 119 3.377439 GTTTTCAGCTGTTAAAACGGGG 58.623 45.455 21.18 0.00 36.27 5.73
119 120 2.351706 TTCAGCTGTTAAAACGGGGT 57.648 45.000 14.67 0.00 35.81 4.95
120 121 2.351706 TCAGCTGTTAAAACGGGGTT 57.648 45.000 14.67 0.00 35.81 4.11
121 122 2.657143 TCAGCTGTTAAAACGGGGTTT 58.343 42.857 14.67 0.00 37.34 3.27
122 123 3.025262 TCAGCTGTTAAAACGGGGTTTT 58.975 40.909 14.67 10.83 45.80 2.43
123 124 3.067040 TCAGCTGTTAAAACGGGGTTTTC 59.933 43.478 14.67 0.00 43.43 2.29
124 125 2.363038 AGCTGTTAAAACGGGGTTTTCC 59.637 45.455 9.51 3.88 43.43 3.13
155 156 3.141409 TTTTTCCACTGGCCTTCCC 57.859 52.632 3.32 0.00 0.00 3.97
156 157 0.560688 TTTTTCCACTGGCCTTCCCT 59.439 50.000 3.32 0.00 0.00 4.20
157 158 1.451449 TTTTCCACTGGCCTTCCCTA 58.549 50.000 3.32 0.00 0.00 3.53
158 159 0.991920 TTTCCACTGGCCTTCCCTAG 59.008 55.000 3.32 0.00 0.00 3.02
159 160 1.562672 TTCCACTGGCCTTCCCTAGC 61.563 60.000 3.32 0.00 0.00 3.42
160 161 1.997874 CCACTGGCCTTCCCTAGCT 60.998 63.158 3.32 0.00 0.00 3.32
161 162 1.566298 CCACTGGCCTTCCCTAGCTT 61.566 60.000 3.32 0.00 0.00 3.74
162 163 0.329596 CACTGGCCTTCCCTAGCTTT 59.670 55.000 3.32 0.00 0.00 3.51
163 164 1.076438 ACTGGCCTTCCCTAGCTTTT 58.924 50.000 3.32 0.00 0.00 2.27
164 165 1.272147 ACTGGCCTTCCCTAGCTTTTG 60.272 52.381 3.32 0.00 0.00 2.44
165 166 0.039618 TGGCCTTCCCTAGCTTTTGG 59.960 55.000 3.32 0.00 0.00 3.28
166 167 0.331616 GGCCTTCCCTAGCTTTTGGA 59.668 55.000 0.00 0.00 0.00 3.53
167 168 1.464734 GCCTTCCCTAGCTTTTGGAC 58.535 55.000 0.00 0.00 0.00 4.02
168 169 1.955683 GCCTTCCCTAGCTTTTGGACC 60.956 57.143 0.00 0.00 0.00 4.46
169 170 1.354368 CCTTCCCTAGCTTTTGGACCA 59.646 52.381 0.00 0.00 0.00 4.02
170 171 2.225017 CCTTCCCTAGCTTTTGGACCAA 60.225 50.000 1.69 1.69 0.00 3.67
171 172 3.564352 CCTTCCCTAGCTTTTGGACCAAT 60.564 47.826 7.99 0.00 0.00 3.16
172 173 3.825908 TCCCTAGCTTTTGGACCAATT 57.174 42.857 7.99 0.00 0.00 2.32
173 174 4.126520 TCCCTAGCTTTTGGACCAATTT 57.873 40.909 7.99 0.00 0.00 1.82
174 175 4.488770 TCCCTAGCTTTTGGACCAATTTT 58.511 39.130 7.99 0.00 0.00 1.82
175 176 4.904853 TCCCTAGCTTTTGGACCAATTTTT 59.095 37.500 7.99 0.00 0.00 1.94
195 196 4.935885 TTTTTGCACGAAAAAGCATGTT 57.064 31.818 0.00 0.00 38.38 2.71
196 197 4.935885 TTTTGCACGAAAAAGCATGTTT 57.064 31.818 0.00 0.00 40.94 2.83
197 198 4.935885 TTTGCACGAAAAAGCATGTTTT 57.064 31.818 1.14 1.14 40.94 2.43
198 199 4.935885 TTGCACGAAAAAGCATGTTTTT 57.064 31.818 13.80 13.80 40.94 1.94
213 214 2.540145 TTTTTCTTCCGCGAGAGGC 58.460 52.632 8.23 0.00 38.69 4.70
214 215 0.250124 TTTTTCTTCCGCGAGAGGCA 60.250 50.000 8.23 0.00 43.84 4.75
215 216 0.949105 TTTTCTTCCGCGAGAGGCAC 60.949 55.000 8.23 0.00 43.84 5.01
216 217 3.626680 TTCTTCCGCGAGAGGCACG 62.627 63.158 8.23 0.00 43.84 5.34
220 221 4.124351 CCGCGAGAGGCACGGTTA 62.124 66.667 8.23 0.00 43.84 2.85
221 222 2.879462 CGCGAGAGGCACGGTTAC 60.879 66.667 0.00 0.00 43.84 2.50
223 224 2.872557 CGAGAGGCACGGTTACGA 59.127 61.111 0.00 0.00 44.60 3.43
224 225 1.210931 CGAGAGGCACGGTTACGAA 59.789 57.895 0.00 0.00 44.60 3.85
225 226 0.387622 CGAGAGGCACGGTTACGAAA 60.388 55.000 0.00 0.00 44.60 3.46
226 227 1.787012 GAGAGGCACGGTTACGAAAA 58.213 50.000 0.00 0.00 44.60 2.29
227 228 2.137523 GAGAGGCACGGTTACGAAAAA 58.862 47.619 0.00 0.00 44.60 1.94
263 264 2.641197 TTTTTCTTCCGCTGGAGGC 58.359 52.632 2.56 0.00 31.21 4.70
264 265 0.179004 TTTTTCTTCCGCTGGAGGCA 60.179 50.000 2.56 0.00 41.91 4.75
265 266 0.889186 TTTTCTTCCGCTGGAGGCAC 60.889 55.000 2.56 0.00 41.91 5.01
266 267 3.589654 TTCTTCCGCTGGAGGCACG 62.590 63.158 2.56 0.00 41.91 5.34
271 272 2.978010 CGCTGGAGGCACGGTTTT 60.978 61.111 0.00 0.00 41.91 2.43
272 273 2.644992 GCTGGAGGCACGGTTTTG 59.355 61.111 0.00 0.00 41.35 2.44
273 274 2.644992 CTGGAGGCACGGTTTTGC 59.355 61.111 0.00 0.00 42.18 3.68
274 275 1.898574 CTGGAGGCACGGTTTTGCT 60.899 57.895 0.00 0.00 42.56 3.91
275 276 1.454847 TGGAGGCACGGTTTTGCTT 60.455 52.632 0.00 0.00 42.56 3.91
276 277 1.285950 GGAGGCACGGTTTTGCTTC 59.714 57.895 0.00 0.00 45.47 3.86
277 278 1.285950 GAGGCACGGTTTTGCTTCC 59.714 57.895 0.00 0.00 41.54 3.46
278 279 2.142357 GAGGCACGGTTTTGCTTCCC 62.142 60.000 0.00 0.00 41.54 3.97
279 280 2.338620 GCACGGTTTTGCTTCCCC 59.661 61.111 0.00 0.00 39.59 4.81
280 281 2.642700 CACGGTTTTGCTTCCCCG 59.357 61.111 0.00 0.00 45.72 5.73
281 282 1.894756 CACGGTTTTGCTTCCCCGA 60.895 57.895 11.41 0.00 43.01 5.14
282 283 1.599797 ACGGTTTTGCTTCCCCGAG 60.600 57.895 11.41 0.00 43.01 4.63
283 284 1.302192 CGGTTTTGCTTCCCCGAGA 60.302 57.895 0.00 0.00 43.01 4.04
284 285 1.298859 CGGTTTTGCTTCCCCGAGAG 61.299 60.000 0.00 0.00 43.01 3.20
309 310 6.216750 CATAGTTATGCTTTTACGAGAGGC 57.783 41.667 0.00 0.00 0.00 4.70
310 311 4.202245 AGTTATGCTTTTACGAGAGGCA 57.798 40.909 0.00 0.00 37.32 4.75
311 312 4.770795 AGTTATGCTTTTACGAGAGGCAT 58.229 39.130 10.49 10.49 44.31 4.40
312 313 4.572389 AGTTATGCTTTTACGAGAGGCATG 59.428 41.667 13.79 0.00 42.48 4.06
313 314 2.760634 TGCTTTTACGAGAGGCATGA 57.239 45.000 0.00 0.00 0.00 3.07
314 315 2.346803 TGCTTTTACGAGAGGCATGAC 58.653 47.619 0.00 0.00 0.00 3.06
315 316 1.666189 GCTTTTACGAGAGGCATGACC 59.334 52.381 0.00 0.00 39.61 4.02
316 317 1.927174 CTTTTACGAGAGGCATGACCG 59.073 52.381 0.00 0.00 46.52 4.79
317 318 0.459585 TTTACGAGAGGCATGACCGC 60.460 55.000 0.00 0.00 46.52 5.68
318 319 2.607668 TTACGAGAGGCATGACCGCG 62.608 60.000 10.65 10.65 44.30 6.46
367 368 6.741448 TTTTGTTATTTTTCTCCTTTCGCG 57.259 33.333 0.00 0.00 0.00 5.87
368 369 3.817238 TGTTATTTTTCTCCTTTCGCGC 58.183 40.909 0.00 0.00 0.00 6.86
369 370 2.798834 TATTTTTCTCCTTTCGCGCG 57.201 45.000 26.76 26.76 0.00 6.86
370 371 1.153353 ATTTTTCTCCTTTCGCGCGA 58.847 45.000 31.40 31.40 0.00 5.87
371 372 0.511221 TTTTTCTCCTTTCGCGCGAG 59.489 50.000 32.74 21.84 0.00 5.03
372 373 1.289109 TTTTCTCCTTTCGCGCGAGG 61.289 55.000 32.74 29.59 0.00 4.63
373 374 4.796231 TCTCCTTTCGCGCGAGGC 62.796 66.667 32.74 0.00 38.69 4.70
375 376 4.451150 TCCTTTCGCGCGAGGCAT 62.451 61.111 32.74 0.00 43.84 4.40
376 377 4.228097 CCTTTCGCGCGAGGCATG 62.228 66.667 32.74 19.21 43.84 4.06
377 378 4.228097 CTTTCGCGCGAGGCATGG 62.228 66.667 32.74 15.49 43.84 3.66
381 382 4.817063 CGCGCGAGGCATGGTTTG 62.817 66.667 28.94 0.00 43.84 2.93
392 393 1.522668 CATGGTTTGCTTCCGTGAGA 58.477 50.000 8.25 0.00 42.63 3.27
393 394 1.466167 CATGGTTTGCTTCCGTGAGAG 59.534 52.381 8.25 0.00 42.63 3.20
394 395 0.884704 TGGTTTGCTTCCGTGAGAGC 60.885 55.000 0.00 0.00 0.00 4.09
395 396 1.578206 GGTTTGCTTCCGTGAGAGCC 61.578 60.000 0.00 0.00 0.00 4.70
396 397 0.884704 GTTTGCTTCCGTGAGAGCCA 60.885 55.000 0.00 0.00 0.00 4.75
397 398 0.884704 TTTGCTTCCGTGAGAGCCAC 60.885 55.000 0.00 0.00 42.30 5.01
404 405 2.430921 GTGAGAGCCACGGTCGTG 60.431 66.667 15.62 15.62 45.02 4.35
405 406 2.910479 TGAGAGCCACGGTCGTGT 60.910 61.111 19.94 4.72 44.02 4.49
406 407 2.338984 GAGAGCCACGGTCGTGTT 59.661 61.111 19.94 9.52 44.02 3.32
407 408 1.300697 GAGAGCCACGGTCGTGTTT 60.301 57.895 19.94 9.20 44.02 2.83
408 409 0.878961 GAGAGCCACGGTCGTGTTTT 60.879 55.000 19.94 6.97 44.02 2.43
409 410 0.878961 AGAGCCACGGTCGTGTTTTC 60.879 55.000 19.94 14.10 44.02 2.29
410 411 2.154427 GAGCCACGGTCGTGTTTTCG 62.154 60.000 19.94 7.38 44.02 3.46
411 412 2.527867 GCCACGGTCGTGTTTTCGT 61.528 57.895 19.94 0.00 44.02 3.85
412 413 4.864248 CACGGTCGTGTTTTCGTG 57.136 55.556 14.51 0.00 44.98 4.35
413 414 4.810730 ACGGTCGTGTTTTCGTGA 57.189 50.000 0.00 0.00 34.40 4.35
414 415 2.585263 ACGGTCGTGTTTTCGTGAG 58.415 52.632 0.00 0.00 34.40 3.51
415 416 0.101040 ACGGTCGTGTTTTCGTGAGA 59.899 50.000 0.00 0.00 34.40 3.27
416 417 0.776451 CGGTCGTGTTTTCGTGAGAG 59.224 55.000 0.00 0.00 43.69 3.20
417 418 1.137513 GGTCGTGTTTTCGTGAGAGG 58.862 55.000 0.00 0.00 43.69 3.69
418 419 0.507358 GTCGTGTTTTCGTGAGAGGC 59.493 55.000 0.00 0.00 43.69 4.70
419 420 0.103390 TCGTGTTTTCGTGAGAGGCA 59.897 50.000 0.00 0.00 43.69 4.75
420 421 1.148310 CGTGTTTTCGTGAGAGGCAT 58.852 50.000 0.00 0.00 43.69 4.40
421 422 1.136252 CGTGTTTTCGTGAGAGGCATG 60.136 52.381 0.00 0.00 43.69 4.06
422 423 1.197721 GTGTTTTCGTGAGAGGCATGG 59.802 52.381 0.00 0.00 43.69 3.66
423 424 0.169009 GTTTTCGTGAGAGGCATGGC 59.831 55.000 12.14 12.14 43.69 4.40
468 469 2.935955 CACGTCCGTGCCACTTTC 59.064 61.111 6.91 0.00 39.39 2.62
469 470 2.660552 ACGTCCGTGCCACTTTCG 60.661 61.111 0.00 0.00 0.00 3.46
470 471 2.355363 CGTCCGTGCCACTTTCGA 60.355 61.111 0.00 0.00 0.00 3.71
471 472 1.952133 CGTCCGTGCCACTTTCGAA 60.952 57.895 0.00 0.00 0.00 3.71
472 473 1.492319 CGTCCGTGCCACTTTCGAAA 61.492 55.000 10.71 10.71 0.00 3.46
473 474 0.658897 GTCCGTGCCACTTTCGAAAA 59.341 50.000 12.41 0.00 0.00 2.29
474 475 0.941542 TCCGTGCCACTTTCGAAAAG 59.058 50.000 12.41 7.47 0.00 2.27
475 476 0.040425 CCGTGCCACTTTCGAAAAGG 60.040 55.000 19.56 19.56 0.00 3.11
476 477 0.941542 CGTGCCACTTTCGAAAAGGA 59.058 50.000 25.24 11.43 0.00 3.36
477 478 1.332375 CGTGCCACTTTCGAAAAGGAA 59.668 47.619 25.24 16.47 0.00 3.36
478 479 2.223386 CGTGCCACTTTCGAAAAGGAAA 60.223 45.455 25.24 13.79 34.87 3.13
479 480 3.732471 CGTGCCACTTTCGAAAAGGAAAA 60.732 43.478 25.24 11.91 35.64 2.29
480 481 4.177783 GTGCCACTTTCGAAAAGGAAAAA 58.822 39.130 25.24 10.05 35.64 1.94
498 499 2.415697 AAAATGTGCTTTCGGTTCGG 57.584 45.000 0.00 0.00 0.00 4.30
499 500 1.314730 AAATGTGCTTTCGGTTCGGT 58.685 45.000 0.00 0.00 0.00 4.69
500 501 1.314730 AATGTGCTTTCGGTTCGGTT 58.685 45.000 0.00 0.00 0.00 4.44
501 502 1.314730 ATGTGCTTTCGGTTCGGTTT 58.685 45.000 0.00 0.00 0.00 3.27
502 503 1.096416 TGTGCTTTCGGTTCGGTTTT 58.904 45.000 0.00 0.00 0.00 2.43
503 504 1.473278 TGTGCTTTCGGTTCGGTTTTT 59.527 42.857 0.00 0.00 0.00 1.94
537 538 8.434870 AAATTCGTCAAAACTTATCAACATCG 57.565 30.769 0.00 0.00 0.00 3.84
538 539 5.524511 TCGTCAAAACTTATCAACATCGG 57.475 39.130 0.00 0.00 0.00 4.18
539 540 5.231702 TCGTCAAAACTTATCAACATCGGA 58.768 37.500 0.00 0.00 0.00 4.55
540 541 5.872617 TCGTCAAAACTTATCAACATCGGAT 59.127 36.000 0.00 0.00 0.00 4.18
541 542 6.035650 TCGTCAAAACTTATCAACATCGGATC 59.964 38.462 0.00 0.00 0.00 3.36
542 543 6.036083 CGTCAAAACTTATCAACATCGGATCT 59.964 38.462 0.00 0.00 0.00 2.75
543 544 7.222031 CGTCAAAACTTATCAACATCGGATCTA 59.778 37.037 0.00 0.00 0.00 1.98
544 545 8.543774 GTCAAAACTTATCAACATCGGATCTAG 58.456 37.037 0.00 0.00 0.00 2.43
545 546 8.258007 TCAAAACTTATCAACATCGGATCTAGT 58.742 33.333 0.00 0.00 0.00 2.57
546 547 8.883731 CAAAACTTATCAACATCGGATCTAGTT 58.116 33.333 0.00 0.00 34.20 2.24
547 548 9.449719 AAAACTTATCAACATCGGATCTAGTTT 57.550 29.630 0.00 0.00 39.19 2.66
548 549 9.449719 AAACTTATCAACATCGGATCTAGTTTT 57.550 29.630 0.00 0.00 36.93 2.43
554 555 9.838339 ATCAACATCGGATCTAGTTTTAAAGAT 57.162 29.630 0.00 0.00 35.15 2.40
555 556 9.314321 TCAACATCGGATCTAGTTTTAAAGATC 57.686 33.333 6.39 6.39 44.88 2.75
556 557 9.319143 CAACATCGGATCTAGTTTTAAAGATCT 57.681 33.333 12.45 0.00 44.94 2.75
560 561 7.701809 CGGATCTAGTTTTAAAGATCTGGAC 57.298 40.000 12.92 0.00 45.71 4.02
561 562 6.418226 CGGATCTAGTTTTAAAGATCTGGACG 59.582 42.308 12.92 6.43 45.71 4.79
562 563 6.201234 GGATCTAGTTTTAAAGATCTGGACGC 59.799 42.308 12.45 6.07 44.94 5.19
563 564 5.100259 TCTAGTTTTAAAGATCTGGACGCG 58.900 41.667 3.53 3.53 0.00 6.01
564 565 3.921677 AGTTTTAAAGATCTGGACGCGA 58.078 40.909 15.93 0.00 0.00 5.87
565 566 3.927142 AGTTTTAAAGATCTGGACGCGAG 59.073 43.478 15.93 0.00 0.00 5.03
566 567 2.579207 TTAAAGATCTGGACGCGAGG 57.421 50.000 15.93 0.00 0.00 4.63
567 568 1.758936 TAAAGATCTGGACGCGAGGA 58.241 50.000 15.93 5.26 0.00 3.71
568 569 0.173708 AAAGATCTGGACGCGAGGAC 59.826 55.000 15.93 0.00 0.00 3.85
569 570 0.681564 AAGATCTGGACGCGAGGACT 60.682 55.000 15.93 0.18 0.00 3.85
570 571 1.098712 AGATCTGGACGCGAGGACTC 61.099 60.000 15.93 0.00 0.00 3.36
571 572 2.065906 GATCTGGACGCGAGGACTCC 62.066 65.000 15.93 9.86 0.00 3.85
572 573 2.838748 ATCTGGACGCGAGGACTCCA 62.839 60.000 15.93 14.68 32.93 3.86
573 574 2.599281 TGGACGCGAGGACTCCAA 60.599 61.111 15.93 0.00 30.81 3.53
574 575 1.949847 CTGGACGCGAGGACTCCAAT 61.950 60.000 15.93 0.00 33.58 3.16
575 576 1.519455 GGACGCGAGGACTCCAATG 60.519 63.158 15.93 0.00 0.00 2.82
576 577 1.519455 GACGCGAGGACTCCAATGG 60.519 63.158 15.93 0.00 0.00 3.16
577 578 2.227089 GACGCGAGGACTCCAATGGT 62.227 60.000 15.93 0.00 0.00 3.55
578 579 1.811266 CGCGAGGACTCCAATGGTG 60.811 63.158 0.00 0.00 0.00 4.17
579 580 1.596934 GCGAGGACTCCAATGGTGA 59.403 57.895 8.49 0.00 0.00 4.02
580 581 0.036388 GCGAGGACTCCAATGGTGAA 60.036 55.000 8.49 0.00 0.00 3.18
581 582 1.610624 GCGAGGACTCCAATGGTGAAA 60.611 52.381 8.49 0.00 0.00 2.69
582 583 2.778299 CGAGGACTCCAATGGTGAAAA 58.222 47.619 8.49 0.00 0.00 2.29
583 584 3.146066 CGAGGACTCCAATGGTGAAAAA 58.854 45.455 8.49 0.00 0.00 1.94
584 585 3.189287 CGAGGACTCCAATGGTGAAAAAG 59.811 47.826 8.49 0.00 0.00 2.27
585 586 4.145052 GAGGACTCCAATGGTGAAAAAGT 58.855 43.478 8.49 0.00 0.00 2.66
586 587 4.546674 AGGACTCCAATGGTGAAAAAGTT 58.453 39.130 8.49 0.00 0.00 2.66
587 588 4.962362 AGGACTCCAATGGTGAAAAAGTTT 59.038 37.500 8.49 0.00 0.00 2.66
588 589 5.069119 AGGACTCCAATGGTGAAAAAGTTTC 59.931 40.000 8.49 0.00 0.00 2.78
589 590 4.932146 ACTCCAATGGTGAAAAAGTTTCG 58.068 39.130 8.49 0.00 0.00 3.46
590 591 4.642885 ACTCCAATGGTGAAAAAGTTTCGA 59.357 37.500 8.49 0.00 0.00 3.71
591 592 5.181690 TCCAATGGTGAAAAAGTTTCGAG 57.818 39.130 0.00 0.00 0.00 4.04
592 593 4.884744 TCCAATGGTGAAAAAGTTTCGAGA 59.115 37.500 0.00 0.00 0.00 4.04
593 594 5.534654 TCCAATGGTGAAAAAGTTTCGAGAT 59.465 36.000 0.00 0.00 0.00 2.75
594 595 6.040391 TCCAATGGTGAAAAAGTTTCGAGATT 59.960 34.615 0.00 0.00 0.00 2.40
595 596 6.701400 CCAATGGTGAAAAAGTTTCGAGATTT 59.299 34.615 0.00 0.00 0.00 2.17
596 597 7.306749 CCAATGGTGAAAAAGTTTCGAGATTTG 60.307 37.037 0.00 0.00 0.00 2.32
597 598 5.587289 TGGTGAAAAAGTTTCGAGATTTGG 58.413 37.500 0.00 0.00 0.00 3.28
598 599 5.358442 TGGTGAAAAAGTTTCGAGATTTGGA 59.642 36.000 0.00 0.00 0.00 3.53
599 600 5.685954 GGTGAAAAAGTTTCGAGATTTGGAC 59.314 40.000 0.00 0.00 0.00 4.02
600 601 5.395486 GTGAAAAAGTTTCGAGATTTGGACG 59.605 40.000 0.00 0.00 0.00 4.79
601 602 3.537793 AAAGTTTCGAGATTTGGACGC 57.462 42.857 0.00 0.00 0.00 5.19
602 603 2.163818 AGTTTCGAGATTTGGACGCA 57.836 45.000 0.00 0.00 0.00 5.24
603 604 1.798813 AGTTTCGAGATTTGGACGCAC 59.201 47.619 0.00 0.00 0.00 5.34
604 605 0.787787 TTTCGAGATTTGGACGCACG 59.212 50.000 0.00 0.00 0.00 5.34
605 606 1.011968 TTCGAGATTTGGACGCACGG 61.012 55.000 0.00 0.00 0.00 4.94
606 607 1.736645 CGAGATTTGGACGCACGGT 60.737 57.895 0.00 0.00 0.00 4.83
607 608 1.289109 CGAGATTTGGACGCACGGTT 61.289 55.000 0.00 0.00 0.00 4.44
608 609 0.872388 GAGATTTGGACGCACGGTTT 59.128 50.000 0.00 0.00 0.00 3.27
609 610 2.070783 GAGATTTGGACGCACGGTTTA 58.929 47.619 0.00 0.00 0.00 2.01
610 611 2.481185 GAGATTTGGACGCACGGTTTAA 59.519 45.455 0.00 0.00 0.00 1.52
611 612 2.482721 AGATTTGGACGCACGGTTTAAG 59.517 45.455 0.00 0.00 0.00 1.85
612 613 1.950828 TTTGGACGCACGGTTTAAGA 58.049 45.000 0.00 0.00 0.00 2.10
613 614 1.504359 TTGGACGCACGGTTTAAGAG 58.496 50.000 0.00 0.00 0.00 2.85
614 615 0.675083 TGGACGCACGGTTTAAGAGA 59.325 50.000 0.00 0.00 0.00 3.10
615 616 1.274167 TGGACGCACGGTTTAAGAGAT 59.726 47.619 0.00 0.00 0.00 2.75
616 617 2.492881 TGGACGCACGGTTTAAGAGATA 59.507 45.455 0.00 0.00 0.00 1.98
617 618 3.056678 TGGACGCACGGTTTAAGAGATAA 60.057 43.478 0.00 0.00 0.00 1.75
618 619 3.928375 GGACGCACGGTTTAAGAGATAAA 59.072 43.478 0.00 0.00 0.00 1.40
619 620 4.389687 GGACGCACGGTTTAAGAGATAAAA 59.610 41.667 0.00 0.00 35.33 1.52
620 621 5.064325 GGACGCACGGTTTAAGAGATAAAAT 59.936 40.000 0.00 0.00 35.33 1.82
621 622 5.864986 ACGCACGGTTTAAGAGATAAAATG 58.135 37.500 0.00 0.00 35.33 2.32
622 623 5.410439 ACGCACGGTTTAAGAGATAAAATGT 59.590 36.000 0.00 0.00 35.33 2.71
623 624 6.072893 ACGCACGGTTTAAGAGATAAAATGTT 60.073 34.615 0.00 0.00 35.33 2.71
624 625 6.799925 CGCACGGTTTAAGAGATAAAATGTTT 59.200 34.615 0.00 0.00 35.33 2.83
625 626 7.325097 CGCACGGTTTAAGAGATAAAATGTTTT 59.675 33.333 0.00 0.00 35.33 2.43
626 627 8.424731 GCACGGTTTAAGAGATAAAATGTTTTG 58.575 33.333 1.16 0.00 35.33 2.44
627 628 9.672086 CACGGTTTAAGAGATAAAATGTTTTGA 57.328 29.630 1.16 0.00 35.33 2.69
666 667 4.736126 AAAAGGGAAAAGTCACAGGTTG 57.264 40.909 0.00 0.00 0.00 3.77
667 668 1.692411 AGGGAAAAGTCACAGGTTGC 58.308 50.000 0.00 0.00 0.00 4.17
668 669 0.310854 GGGAAAAGTCACAGGTTGCG 59.689 55.000 0.00 0.00 0.00 4.85
669 670 1.305201 GGAAAAGTCACAGGTTGCGA 58.695 50.000 0.00 0.00 0.00 5.10
670 671 1.002792 GGAAAAGTCACAGGTTGCGAC 60.003 52.381 0.00 0.00 30.04 5.19
671 672 1.668751 GAAAAGTCACAGGTTGCGACA 59.331 47.619 6.39 0.00 32.22 4.35
672 673 1.745232 AAAGTCACAGGTTGCGACAA 58.255 45.000 6.39 0.00 32.22 3.18
673 674 1.299541 AAGTCACAGGTTGCGACAAG 58.700 50.000 6.39 0.00 32.22 3.16
674 675 0.178068 AGTCACAGGTTGCGACAAGT 59.822 50.000 6.39 0.32 32.22 3.16
675 676 0.304705 GTCACAGGTTGCGACAAGTG 59.695 55.000 17.54 17.54 35.00 3.16
676 677 0.176910 TCACAGGTTGCGACAAGTGA 59.823 50.000 20.66 20.66 38.17 3.41
677 678 1.202639 TCACAGGTTGCGACAAGTGAT 60.203 47.619 20.66 0.42 36.68 3.06
678 679 1.069703 CACAGGTTGCGACAAGTGATG 60.070 52.381 18.40 5.15 35.41 3.07
679 680 0.110056 CAGGTTGCGACAAGTGATGC 60.110 55.000 6.39 0.00 0.00 3.91
680 681 0.534877 AGGTTGCGACAAGTGATGCA 60.535 50.000 6.39 0.00 35.15 3.96
681 682 0.385974 GGTTGCGACAAGTGATGCAC 60.386 55.000 6.39 0.00 37.01 4.57
682 683 0.307453 GTTGCGACAAGTGATGCACA 59.693 50.000 0.00 0.00 37.01 4.57
683 684 1.069022 GTTGCGACAAGTGATGCACAT 60.069 47.619 0.00 0.00 37.01 3.21
684 685 0.518195 TGCGACAAGTGATGCACATG 59.482 50.000 0.00 0.00 38.74 3.21
685 686 0.518636 GCGACAAGTGATGCACATGT 59.481 50.000 7.99 7.99 46.56 3.21
686 687 1.731709 GCGACAAGTGATGCACATGTA 59.268 47.619 8.21 0.00 44.47 2.29
687 688 2.222886 GCGACAAGTGATGCACATGTAG 60.223 50.000 8.21 9.35 44.47 2.74
688 689 2.995939 CGACAAGTGATGCACATGTAGT 59.004 45.455 8.21 0.00 44.47 2.73
689 690 3.181527 CGACAAGTGATGCACATGTAGTG 60.182 47.826 8.21 0.00 44.47 2.74
698 699 2.975410 CACATGTAGTGCACCACTTG 57.025 50.000 23.27 23.27 42.59 3.16
699 700 2.221169 CACATGTAGTGCACCACTTGT 58.779 47.619 24.35 24.35 42.59 3.16
700 701 2.224079 CACATGTAGTGCACCACTTGTC 59.776 50.000 26.26 7.10 42.59 3.18
701 702 2.158827 ACATGTAGTGCACCACTTGTCA 60.159 45.455 24.35 10.55 42.59 3.58
702 703 1.948104 TGTAGTGCACCACTTGTCAC 58.052 50.000 16.39 2.03 42.59 3.67
703 704 1.208293 TGTAGTGCACCACTTGTCACA 59.792 47.619 16.39 4.41 42.59 3.58
704 705 2.285083 GTAGTGCACCACTTGTCACAA 58.715 47.619 14.63 0.00 42.59 3.33
705 706 1.094785 AGTGCACCACTTGTCACAAC 58.905 50.000 14.63 0.00 42.59 3.32
706 707 0.100503 GTGCACCACTTGTCACAACC 59.899 55.000 5.22 0.00 34.33 3.77
707 708 0.034574 TGCACCACTTGTCACAACCT 60.035 50.000 0.00 0.00 0.00 3.50
708 709 0.381801 GCACCACTTGTCACAACCTG 59.618 55.000 0.00 0.00 0.00 4.00
709 710 2.016604 GCACCACTTGTCACAACCTGA 61.017 52.381 0.00 0.00 0.00 3.86
710 711 1.942657 CACCACTTGTCACAACCTGAG 59.057 52.381 0.00 0.00 0.00 3.35
711 712 0.947244 CCACTTGTCACAACCTGAGC 59.053 55.000 0.00 0.00 0.00 4.26
712 713 1.667236 CACTTGTCACAACCTGAGCA 58.333 50.000 0.00 0.00 0.00 4.26
713 714 1.600957 CACTTGTCACAACCTGAGCAG 59.399 52.381 0.00 0.00 0.00 4.24
714 715 1.210478 ACTTGTCACAACCTGAGCAGT 59.790 47.619 0.00 0.00 0.00 4.40
715 716 2.292267 CTTGTCACAACCTGAGCAGTT 58.708 47.619 0.00 0.00 0.00 3.16
716 717 1.667236 TGTCACAACCTGAGCAGTTG 58.333 50.000 2.25 2.25 0.00 3.16
717 718 1.209261 TGTCACAACCTGAGCAGTTGA 59.791 47.619 10.38 3.38 32.90 3.18
718 719 1.869767 GTCACAACCTGAGCAGTTGAG 59.130 52.381 10.38 3.01 32.90 3.02
719 720 1.762370 TCACAACCTGAGCAGTTGAGA 59.238 47.619 10.38 5.30 32.90 3.27
720 721 2.141517 CACAACCTGAGCAGTTGAGAG 58.858 52.381 10.38 0.00 32.90 3.20
721 722 1.765314 ACAACCTGAGCAGTTGAGAGT 59.235 47.619 10.38 0.00 32.90 3.24
722 723 2.141517 CAACCTGAGCAGTTGAGAGTG 58.858 52.381 0.00 0.00 0.00 3.51
723 724 1.709578 ACCTGAGCAGTTGAGAGTGA 58.290 50.000 0.00 0.00 0.00 3.41
724 725 2.255406 ACCTGAGCAGTTGAGAGTGAT 58.745 47.619 0.00 0.00 0.00 3.06
725 726 2.233431 ACCTGAGCAGTTGAGAGTGATC 59.767 50.000 0.00 0.00 41.04 2.92
726 727 2.496871 CCTGAGCAGTTGAGAGTGATCT 59.503 50.000 0.00 0.00 41.20 2.75
727 728 3.055963 CCTGAGCAGTTGAGAGTGATCTT 60.056 47.826 0.00 0.00 41.20 2.40
728 729 4.563168 CCTGAGCAGTTGAGAGTGATCTTT 60.563 45.833 0.00 0.00 41.20 2.52
729 730 5.337089 CCTGAGCAGTTGAGAGTGATCTTTA 60.337 44.000 0.00 0.00 41.20 1.85
730 731 6.101650 TGAGCAGTTGAGAGTGATCTTTAA 57.898 37.500 0.00 0.00 41.20 1.52
731 732 6.524734 TGAGCAGTTGAGAGTGATCTTTAAA 58.475 36.000 0.00 0.00 41.20 1.52
732 733 6.992123 TGAGCAGTTGAGAGTGATCTTTAAAA 59.008 34.615 0.00 0.00 41.20 1.52
733 734 7.172190 TGAGCAGTTGAGAGTGATCTTTAAAAG 59.828 37.037 0.00 0.00 41.20 2.27
734 735 6.429385 AGCAGTTGAGAGTGATCTTTAAAAGG 59.571 38.462 0.00 0.00 0.00 3.11
735 736 6.428159 GCAGTTGAGAGTGATCTTTAAAAGGA 59.572 38.462 0.00 0.00 0.00 3.36
736 737 7.360776 GCAGTTGAGAGTGATCTTTAAAAGGAG 60.361 40.741 0.00 0.00 0.00 3.69
737 738 7.659390 CAGTTGAGAGTGATCTTTAAAAGGAGT 59.341 37.037 0.00 0.00 0.00 3.85
738 739 8.871125 AGTTGAGAGTGATCTTTAAAAGGAGTA 58.129 33.333 0.00 0.00 0.00 2.59
739 740 8.927721 GTTGAGAGTGATCTTTAAAAGGAGTAC 58.072 37.037 0.00 0.00 0.00 2.73
740 741 8.423906 TGAGAGTGATCTTTAAAAGGAGTACT 57.576 34.615 0.00 0.00 0.00 2.73
741 742 8.871125 TGAGAGTGATCTTTAAAAGGAGTACTT 58.129 33.333 0.00 0.00 42.52 2.24
742 743 9.361315 GAGAGTGATCTTTAAAAGGAGTACTTC 57.639 37.037 0.00 0.00 38.85 3.01
743 744 9.095700 AGAGTGATCTTTAAAAGGAGTACTTCT 57.904 33.333 0.00 0.00 38.85 2.85
744 745 9.713713 GAGTGATCTTTAAAAGGAGTACTTCTT 57.286 33.333 10.89 10.89 38.85 2.52
759 760 9.989869 GGAGTACTTCTTAATTAGTGATTTTGC 57.010 33.333 0.00 0.00 0.00 3.68
1017 1022 2.163010 CAGCATGGCGTTTCTCTTCAAT 59.837 45.455 0.00 0.00 0.00 2.57
1125 1130 2.225068 ACCAACATCGATTAGCCTCG 57.775 50.000 0.00 0.00 39.99 4.63
1147 1152 7.066284 CCTCGAACACAGGAAATGATTCTAAAT 59.934 37.037 0.00 0.00 35.79 1.40
1200 1205 2.502068 ATGTGGGAGGGAGATGATGA 57.498 50.000 0.00 0.00 0.00 2.92
1224 1230 5.432645 TGTGTGTTGAAACATCTGGAAGTA 58.567 37.500 0.00 0.00 41.59 2.24
1226 1232 7.220740 TGTGTGTTGAAACATCTGGAAGTATA 58.779 34.615 0.00 0.00 41.59 1.47
1227 1233 7.387673 TGTGTGTTGAAACATCTGGAAGTATAG 59.612 37.037 0.00 0.00 41.59 1.31
1241 1247 8.924303 TCTGGAAGTATAGCTGTATAAATGTGT 58.076 33.333 0.00 0.00 33.76 3.72
1249 1255 8.690203 ATAGCTGTATAAATGTGTTTATGGCA 57.310 30.769 0.00 0.00 40.01 4.92
1271 1278 3.797039 TCCTCAATGCTCTAAATCGTGG 58.203 45.455 0.00 0.00 0.00 4.94
1285 1293 4.766404 AATCGTGGTTGATTTTCTGTCC 57.234 40.909 0.00 0.00 35.03 4.02
1295 1303 6.434340 GGTTGATTTTCTGTCCAGGTTAGAAT 59.566 38.462 8.39 0.00 31.21 2.40
1297 1305 7.687941 TGATTTTCTGTCCAGGTTAGAATTC 57.312 36.000 0.00 0.00 31.21 2.17
1329 1337 6.830873 TGTTAGTCCTAGGTTAGAGTGTTC 57.169 41.667 9.08 0.00 0.00 3.18
1353 1361 9.605275 TTCCATTTTCTATATGACTTCTCTGTG 57.395 33.333 0.00 0.00 0.00 3.66
1378 1386 9.625747 TGTCTTATCTTATGTATTGCCAATTCA 57.374 29.630 0.00 0.00 0.00 2.57
1684 1692 8.498054 TTTTGTCTTCATAGGCAATAGAGAAG 57.502 34.615 0.00 0.00 44.88 2.85
2795 2803 4.805192 GCATTGACACATTCACAGTTTTGT 59.195 37.500 0.00 0.00 38.31 2.83
3639 3648 5.788430 TCGATATATCCCTGGATACCCAAT 58.212 41.667 8.04 1.05 42.98 3.16
3643 3652 8.660435 CGATATATCCCTGGATACCCAATAATT 58.340 37.037 8.04 0.00 42.98 1.40
3730 3739 5.335191 GCATTTAGGTGGTGAAACAAGAGAG 60.335 44.000 0.00 0.00 39.98 3.20
3731 3740 2.938956 AGGTGGTGAAACAAGAGAGG 57.061 50.000 0.00 0.00 39.98 3.69
3842 3851 2.600729 CCCCTGCAGAAGAGTGGCT 61.601 63.158 17.39 0.00 0.00 4.75
3853 3862 4.096984 CAGAAGAGTGGCTGTGAAAACTTT 59.903 41.667 0.00 0.00 0.00 2.66
4000 4009 1.334059 GCATACATCCCGAACATTGCG 60.334 52.381 0.00 0.00 0.00 4.85
4292 4301 3.312421 TGTTTCTGTGGCTCTTTCTTTCG 59.688 43.478 0.00 0.00 0.00 3.46
4315 4324 4.393990 GTCAGTAACCGGATTTAAACAGGG 59.606 45.833 9.46 5.00 0.00 4.45
4316 4325 3.128068 CAGTAACCGGATTTAAACAGGGC 59.872 47.826 9.46 0.00 0.00 5.19
4317 4326 1.170442 AACCGGATTTAAACAGGGCG 58.830 50.000 9.46 0.00 0.00 6.13
4318 4327 1.310216 ACCGGATTTAAACAGGGCGC 61.310 55.000 9.46 0.00 0.00 6.53
4319 4328 1.029947 CCGGATTTAAACAGGGCGCT 61.030 55.000 7.64 0.00 0.00 5.92
4320 4329 0.098728 CGGATTTAAACAGGGCGCTG 59.901 55.000 27.57 27.57 0.00 5.18
4321 4330 0.455815 GGATTTAAACAGGGCGCTGG 59.544 55.000 31.41 15.58 0.00 4.85
4322 4331 1.173913 GATTTAAACAGGGCGCTGGT 58.826 50.000 31.41 25.17 0.00 4.00
4323 4332 0.887933 ATTTAAACAGGGCGCTGGTG 59.112 50.000 31.41 11.11 0.00 4.17
4324 4333 0.179015 TTTAAACAGGGCGCTGGTGA 60.179 50.000 31.41 18.84 0.00 4.02
4325 4334 0.179015 TTAAACAGGGCGCTGGTGAA 60.179 50.000 31.41 23.60 0.00 3.18
4326 4335 0.887387 TAAACAGGGCGCTGGTGAAC 60.887 55.000 31.41 0.00 0.00 3.18
4327 4336 2.624674 AAACAGGGCGCTGGTGAACT 62.625 55.000 31.41 10.28 0.00 3.01
4328 4337 2.743928 CAGGGCGCTGGTGAACTC 60.744 66.667 22.42 0.00 0.00 3.01
4329 4338 4.021925 AGGGCGCTGGTGAACTCC 62.022 66.667 7.64 0.00 0.00 3.85
4330 4339 4.329545 GGGCGCTGGTGAACTCCA 62.330 66.667 7.64 0.00 36.00 3.86
4337 4346 2.080286 CTGGTGAACTCCAGTAACCG 57.920 55.000 12.89 0.00 46.92 4.44
4338 4347 0.682852 TGGTGAACTCCAGTAACCGG 59.317 55.000 0.00 0.00 37.58 5.28
4339 4348 0.971386 GGTGAACTCCAGTAACCGGA 59.029 55.000 9.46 0.00 0.00 5.14
4340 4349 1.553704 GGTGAACTCCAGTAACCGGAT 59.446 52.381 9.46 0.00 0.00 4.18
4341 4350 2.027469 GGTGAACTCCAGTAACCGGATT 60.027 50.000 9.46 0.67 0.00 3.01
4342 4351 3.558533 GGTGAACTCCAGTAACCGGATTT 60.559 47.826 9.46 0.00 0.00 2.17
4343 4352 4.322953 GGTGAACTCCAGTAACCGGATTTA 60.323 45.833 9.46 0.00 0.00 1.40
4344 4353 5.240121 GTGAACTCCAGTAACCGGATTTAA 58.760 41.667 9.46 0.00 0.00 1.52
4345 4354 5.702209 GTGAACTCCAGTAACCGGATTTAAA 59.298 40.000 9.46 0.00 0.00 1.52
4346 4355 5.702209 TGAACTCCAGTAACCGGATTTAAAC 59.298 40.000 9.46 0.00 0.00 2.01
4347 4356 5.231702 ACTCCAGTAACCGGATTTAAACA 57.768 39.130 9.46 0.00 0.00 2.83
4348 4357 5.243207 ACTCCAGTAACCGGATTTAAACAG 58.757 41.667 9.46 0.00 0.00 3.16
4349 4358 4.581868 TCCAGTAACCGGATTTAAACAGG 58.418 43.478 9.46 0.00 0.00 4.00
4376 4385 2.427506 GTGAACTCCAGAAGCCGATTT 58.572 47.619 0.00 0.00 0.00 2.17
4435 4450 4.679373 TTGTCTCTGCTGAACTCTTCTT 57.321 40.909 0.00 0.00 0.00 2.52
4443 4458 2.549778 GCTGAACTCTTCTTGCAGGTCT 60.550 50.000 0.00 0.00 32.85 3.85
4501 4516 8.144478 TCTCATGTTATTTGAGGTAGTATCTGC 58.856 37.037 0.00 0.00 40.80 4.26
4529 4544 1.364269 TCCCGTTGTTGTAAGGGGAT 58.636 50.000 14.26 0.00 46.19 3.85
4530 4545 2.549082 TCCCGTTGTTGTAAGGGGATA 58.451 47.619 14.26 0.00 46.19 2.59
4531 4546 3.116959 TCCCGTTGTTGTAAGGGGATAT 58.883 45.455 14.26 0.00 46.19 1.63
4532 4547 3.524380 TCCCGTTGTTGTAAGGGGATATT 59.476 43.478 14.26 0.00 46.19 1.28
4643 4658 7.634522 GCGAACTGCTTCTCATCTAAATAAAT 58.365 34.615 0.00 0.00 41.73 1.40
4644 4659 8.765219 GCGAACTGCTTCTCATCTAAATAAATA 58.235 33.333 0.00 0.00 41.73 1.40
4712 4729 5.355910 ACAGTGTCCAAAACGTCTTACATTT 59.644 36.000 0.00 0.00 0.00 2.32
4713 4730 6.127842 ACAGTGTCCAAAACGTCTTACATTTT 60.128 34.615 0.00 0.00 0.00 1.82
4714 4731 6.196353 CAGTGTCCAAAACGTCTTACATTTTG 59.804 38.462 4.77 4.77 41.10 2.44
4715 4732 6.094325 AGTGTCCAAAACGTCTTACATTTTGA 59.906 34.615 11.61 0.00 43.07 2.69
4716 4733 6.915843 GTGTCCAAAACGTCTTACATTTTGAT 59.084 34.615 11.61 0.00 43.07 2.57
4717 4734 8.071368 GTGTCCAAAACGTCTTACATTTTGATA 58.929 33.333 11.61 0.00 43.07 2.15
4718 4735 8.071368 TGTCCAAAACGTCTTACATTTTGATAC 58.929 33.333 11.61 9.82 43.07 2.24
4719 4736 8.071368 GTCCAAAACGTCTTACATTTTGATACA 58.929 33.333 11.61 0.00 43.07 2.29
4720 4737 8.788806 TCCAAAACGTCTTACATTTTGATACAT 58.211 29.630 11.61 0.00 43.07 2.29
4724 4741 8.433421 AACGTCTTACATTTTGATACATAGGG 57.567 34.615 0.00 0.00 0.00 3.53
4725 4742 7.788026 ACGTCTTACATTTTGATACATAGGGA 58.212 34.615 0.00 0.00 0.00 4.20
4726 4743 7.926555 ACGTCTTACATTTTGATACATAGGGAG 59.073 37.037 0.00 0.00 0.00 4.30
4727 4744 7.926555 CGTCTTACATTTTGATACATAGGGAGT 59.073 37.037 0.00 0.00 0.00 3.85
4768 4785 3.938963 TCCAATTGGTCGAGTAATCTTGC 59.061 43.478 23.76 0.00 36.34 4.01
4772 4789 3.520290 TGGTCGAGTAATCTTGCGATT 57.480 42.857 0.00 0.00 42.34 3.34
4847 4864 0.179018 AAACTGAGGTGGCTGGTGTC 60.179 55.000 0.00 0.00 0.00 3.67
4856 4873 2.267642 GCTGGTGTCGTGGCCATA 59.732 61.111 9.72 0.00 33.84 2.74
4968 4993 2.626266 TGTATCGTACTGGATGGCGATT 59.374 45.455 3.69 0.00 42.84 3.34
5034 5059 3.741476 CTGCTGACCAAAGGCCGC 61.741 66.667 0.00 0.00 0.00 6.53
5158 5188 1.798813 GTAAGTTGTCTTGCCGACCTG 59.201 52.381 1.37 0.00 42.13 4.00
5159 5189 0.535102 AAGTTGTCTTGCCGACCTGG 60.535 55.000 0.00 0.00 42.13 4.45
5160 5190 1.227853 GTTGTCTTGCCGACCTGGT 60.228 57.895 0.00 0.00 42.13 4.00
5161 5191 0.818040 GTTGTCTTGCCGACCTGGTT 60.818 55.000 0.00 0.00 42.13 3.67
5162 5192 0.759959 TTGTCTTGCCGACCTGGTTA 59.240 50.000 0.00 0.00 42.13 2.85
5163 5193 0.320374 TGTCTTGCCGACCTGGTTAG 59.680 55.000 0.00 0.00 42.13 2.34
5164 5194 1.019805 GTCTTGCCGACCTGGTTAGC 61.020 60.000 13.38 13.38 41.21 3.09
5188 5218 2.617274 GCACCGAAAGAGCACCCAC 61.617 63.158 0.00 0.00 33.18 4.61
5189 5219 2.030562 ACCGAAAGAGCACCCACG 59.969 61.111 0.00 0.00 0.00 4.94
5195 5225 1.531578 GAAAGAGCACCCACGTTCTTC 59.468 52.381 0.00 0.00 35.66 2.87
5210 5240 5.459107 CACGTTCTTCGGTAAGATCATAAGG 59.541 44.000 0.00 0.00 41.36 2.69
5211 5241 4.444720 CGTTCTTCGGTAAGATCATAAGGC 59.555 45.833 0.00 0.00 41.36 4.35
5212 5242 5.602628 GTTCTTCGGTAAGATCATAAGGCT 58.397 41.667 0.00 0.00 41.36 4.58
5213 5243 5.201713 TCTTCGGTAAGATCATAAGGCTG 57.798 43.478 0.00 0.00 36.80 4.85
5214 5244 4.039245 TCTTCGGTAAGATCATAAGGCTGG 59.961 45.833 0.00 0.00 36.80 4.85
5215 5245 3.305720 TCGGTAAGATCATAAGGCTGGT 58.694 45.455 0.00 0.00 0.00 4.00
5216 5246 3.069586 TCGGTAAGATCATAAGGCTGGTG 59.930 47.826 0.00 0.00 0.00 4.17
5217 5247 3.069586 CGGTAAGATCATAAGGCTGGTGA 59.930 47.826 4.78 4.78 0.00 4.02
5218 5248 4.381411 GGTAAGATCATAAGGCTGGTGAC 58.619 47.826 4.44 0.81 0.00 3.67
5219 5249 4.141711 GGTAAGATCATAAGGCTGGTGACA 60.142 45.833 4.44 0.00 39.59 3.58
5220 5250 4.574674 AAGATCATAAGGCTGGTGACAA 57.425 40.909 4.44 0.00 42.06 3.18
5221 5251 4.785346 AGATCATAAGGCTGGTGACAAT 57.215 40.909 4.44 0.00 42.06 2.71
5222 5252 4.458397 AGATCATAAGGCTGGTGACAATG 58.542 43.478 4.44 0.00 42.06 2.82
5223 5253 3.003394 TCATAAGGCTGGTGACAATGG 57.997 47.619 0.00 0.00 42.06 3.16
5224 5254 2.026641 CATAAGGCTGGTGACAATGGG 58.973 52.381 0.00 0.00 42.06 4.00
5225 5255 0.323360 TAAGGCTGGTGACAATGGGC 60.323 55.000 0.00 0.00 42.06 5.36
5226 5256 2.283101 GGCTGGTGACAATGGGCA 60.283 61.111 0.00 0.00 42.06 5.36
5227 5257 1.907807 GGCTGGTGACAATGGGCAA 60.908 57.895 0.00 0.00 42.06 4.52
5228 5258 1.588082 GCTGGTGACAATGGGCAAG 59.412 57.895 0.00 0.00 42.06 4.01
5229 5259 0.895100 GCTGGTGACAATGGGCAAGA 60.895 55.000 0.00 0.00 42.06 3.02
5230 5260 1.619654 CTGGTGACAATGGGCAAGAA 58.380 50.000 0.00 0.00 42.06 2.52
5231 5261 1.270550 CTGGTGACAATGGGCAAGAAC 59.729 52.381 0.00 0.00 42.06 3.01
5232 5262 1.327303 GGTGACAATGGGCAAGAACA 58.673 50.000 0.00 0.00 0.00 3.18
5233 5263 1.895131 GGTGACAATGGGCAAGAACAT 59.105 47.619 0.00 0.00 0.00 2.71
5234 5264 3.088532 GGTGACAATGGGCAAGAACATA 58.911 45.455 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.509548 CCCACCCCCAAGTGATCCTT 61.510 60.000 0.00 0.00 40.34 3.36
2 3 2.683475 CCCACCCCCAAGTGATCC 59.317 66.667 0.00 0.00 40.34 3.36
3 4 1.279025 TAGCCCACCCCCAAGTGATC 61.279 60.000 0.00 0.00 40.34 2.92
5 6 1.464395 TTAGCCCACCCCCAAGTGA 60.464 57.895 0.00 0.00 40.34 3.41
6 7 1.000896 CTTAGCCCACCCCCAAGTG 60.001 63.158 0.00 0.00 37.51 3.16
7 8 1.151677 TCTTAGCCCACCCCCAAGT 60.152 57.895 0.00 0.00 0.00 3.16
8 9 1.609783 CTCTTAGCCCACCCCCAAG 59.390 63.158 0.00 0.00 0.00 3.61
9 10 2.612493 GCTCTTAGCCCACCCCCAA 61.612 63.158 0.00 0.00 34.48 4.12
10 11 3.015145 GCTCTTAGCCCACCCCCA 61.015 66.667 0.00 0.00 34.48 4.96
11 12 4.176752 CGCTCTTAGCCCACCCCC 62.177 72.222 0.00 0.00 38.18 5.40
12 13 4.858680 GCGCTCTTAGCCCACCCC 62.859 72.222 0.00 0.00 38.18 4.95
13 14 4.096003 TGCGCTCTTAGCCCACCC 62.096 66.667 9.73 0.00 38.18 4.61
14 15 2.820037 GTGCGCTCTTAGCCCACC 60.820 66.667 9.73 0.00 42.51 4.61
15 16 2.047274 TGTGCGCTCTTAGCCCAC 60.047 61.111 9.73 9.25 46.98 4.61
16 17 2.265739 CTGTGCGCTCTTAGCCCA 59.734 61.111 9.73 0.00 38.18 5.36
17 18 3.198489 GCTGTGCGCTCTTAGCCC 61.198 66.667 9.73 0.00 38.18 5.19
19 20 3.558411 CGGCTGTGCGCTCTTAGC 61.558 66.667 9.73 11.14 39.13 3.09
20 21 3.558411 GCGGCTGTGCGCTCTTAG 61.558 66.667 9.73 0.04 39.13 2.18
21 22 4.069232 AGCGGCTGTGCGCTCTTA 62.069 61.111 9.73 0.00 40.67 2.10
29 30 4.111016 CATGTGGCAGCGGCTGTG 62.111 66.667 28.88 16.19 40.87 3.66
30 31 4.648626 ACATGTGGCAGCGGCTGT 62.649 61.111 28.88 8.03 40.87 4.40
31 32 3.807538 GACATGTGGCAGCGGCTG 61.808 66.667 25.21 25.21 40.87 4.85
32 33 4.334118 TGACATGTGGCAGCGGCT 62.334 61.111 1.15 0.00 40.87 5.52
33 34 4.107051 GTGACATGTGGCAGCGGC 62.107 66.667 1.15 0.00 30.83 6.53
34 35 3.792047 CGTGACATGTGGCAGCGG 61.792 66.667 1.15 0.00 30.83 5.52
35 36 4.450122 GCGTGACATGTGGCAGCG 62.450 66.667 1.15 4.33 30.83 5.18
36 37 3.031964 GAGCGTGACATGTGGCAGC 62.032 63.158 1.15 3.41 30.83 5.25
37 38 1.375140 AGAGCGTGACATGTGGCAG 60.375 57.895 1.15 0.00 30.83 4.85
38 39 1.668793 CAGAGCGTGACATGTGGCA 60.669 57.895 1.15 0.00 0.00 4.92
39 40 2.393768 CCAGAGCGTGACATGTGGC 61.394 63.158 1.15 3.81 0.00 5.01
40 41 0.107993 ATCCAGAGCGTGACATGTGG 60.108 55.000 1.15 0.00 0.00 4.17
41 42 1.004595 CATCCAGAGCGTGACATGTG 58.995 55.000 1.15 0.00 0.00 3.21
42 43 0.742281 GCATCCAGAGCGTGACATGT 60.742 55.000 0.00 0.00 0.00 3.21
43 44 0.461516 AGCATCCAGAGCGTGACATG 60.462 55.000 0.00 0.00 37.01 3.21
44 45 1.114627 TAGCATCCAGAGCGTGACAT 58.885 50.000 0.00 0.00 37.01 3.06
45 46 0.173481 GTAGCATCCAGAGCGTGACA 59.827 55.000 0.00 0.00 37.01 3.58
46 47 0.528684 GGTAGCATCCAGAGCGTGAC 60.529 60.000 0.00 0.00 37.01 3.67
47 48 0.684479 AGGTAGCATCCAGAGCGTGA 60.684 55.000 0.00 0.00 37.01 4.35
48 49 0.176680 AAGGTAGCATCCAGAGCGTG 59.823 55.000 0.00 0.00 37.01 5.34
49 50 0.905357 AAAGGTAGCATCCAGAGCGT 59.095 50.000 0.00 0.00 37.01 5.07
50 51 1.293924 CAAAGGTAGCATCCAGAGCG 58.706 55.000 0.00 0.00 37.01 5.03
51 52 1.210478 TCCAAAGGTAGCATCCAGAGC 59.790 52.381 0.00 0.00 0.00 4.09
52 53 3.853355 ATCCAAAGGTAGCATCCAGAG 57.147 47.619 0.00 0.00 0.00 3.35
53 54 4.591321 AAATCCAAAGGTAGCATCCAGA 57.409 40.909 0.00 0.00 0.00 3.86
54 55 6.966534 ATAAAATCCAAAGGTAGCATCCAG 57.033 37.500 0.00 0.00 0.00 3.86
55 56 7.732222 AAATAAAATCCAAAGGTAGCATCCA 57.268 32.000 0.00 0.00 0.00 3.41
78 79 5.803020 AAACGCATGCCAAAAAGTAAAAA 57.197 30.435 13.15 0.00 0.00 1.94
79 80 5.351465 TGAAAACGCATGCCAAAAAGTAAAA 59.649 32.000 13.15 0.00 0.00 1.52
80 81 4.870426 TGAAAACGCATGCCAAAAAGTAAA 59.130 33.333 13.15 0.00 0.00 2.01
81 82 4.433615 TGAAAACGCATGCCAAAAAGTAA 58.566 34.783 13.15 0.00 0.00 2.24
82 83 4.046938 TGAAAACGCATGCCAAAAAGTA 57.953 36.364 13.15 0.00 0.00 2.24
83 84 2.865551 CTGAAAACGCATGCCAAAAAGT 59.134 40.909 13.15 0.00 0.00 2.66
84 85 2.348779 GCTGAAAACGCATGCCAAAAAG 60.349 45.455 13.15 4.41 0.00 2.27
85 86 1.596727 GCTGAAAACGCATGCCAAAAA 59.403 42.857 13.15 0.00 0.00 1.94
86 87 1.202510 AGCTGAAAACGCATGCCAAAA 60.203 42.857 13.15 0.00 0.00 2.44
87 88 0.388659 AGCTGAAAACGCATGCCAAA 59.611 45.000 13.15 0.00 0.00 3.28
88 89 0.318869 CAGCTGAAAACGCATGCCAA 60.319 50.000 8.42 0.00 0.00 4.52
89 90 1.286570 CAGCTGAAAACGCATGCCA 59.713 52.632 8.42 2.48 0.00 4.92
90 91 0.318955 AACAGCTGAAAACGCATGCC 60.319 50.000 23.35 0.00 0.00 4.40
91 92 2.330231 TAACAGCTGAAAACGCATGC 57.670 45.000 23.35 7.91 0.00 4.06
92 93 4.993550 GTTTTAACAGCTGAAAACGCATG 58.006 39.130 23.35 0.00 36.22 4.06
97 98 3.181484 ACCCCGTTTTAACAGCTGAAAAC 60.181 43.478 23.35 23.69 40.54 2.43
98 99 3.025262 ACCCCGTTTTAACAGCTGAAAA 58.975 40.909 23.35 16.87 0.00 2.29
99 100 2.657143 ACCCCGTTTTAACAGCTGAAA 58.343 42.857 23.35 11.47 0.00 2.69
100 101 2.351706 ACCCCGTTTTAACAGCTGAA 57.648 45.000 23.35 4.90 0.00 3.02
101 102 2.351706 AACCCCGTTTTAACAGCTGA 57.648 45.000 23.35 0.00 0.00 4.26
102 103 3.377439 GAAAACCCCGTTTTAACAGCTG 58.623 45.455 13.48 13.48 44.33 4.24
103 104 2.363038 GGAAAACCCCGTTTTAACAGCT 59.637 45.455 2.65 0.00 44.33 4.24
104 105 2.746269 GGAAAACCCCGTTTTAACAGC 58.254 47.619 2.65 0.00 44.33 4.40
137 138 0.560688 AGGGAAGGCCAGTGGAAAAA 59.439 50.000 15.20 0.00 35.15 1.94
138 139 1.354368 CTAGGGAAGGCCAGTGGAAAA 59.646 52.381 15.20 0.00 35.15 2.29
139 140 0.991920 CTAGGGAAGGCCAGTGGAAA 59.008 55.000 15.20 0.00 35.15 3.13
140 141 1.562672 GCTAGGGAAGGCCAGTGGAA 61.563 60.000 15.20 0.00 35.15 3.53
141 142 1.995626 GCTAGGGAAGGCCAGTGGA 60.996 63.158 15.20 0.00 35.15 4.02
142 143 1.566298 AAGCTAGGGAAGGCCAGTGG 61.566 60.000 5.01 4.20 35.15 4.00
143 144 0.329596 AAAGCTAGGGAAGGCCAGTG 59.670 55.000 5.01 0.00 35.15 3.66
144 145 1.076438 AAAAGCTAGGGAAGGCCAGT 58.924 50.000 5.01 0.00 35.15 4.00
145 146 1.467920 CAAAAGCTAGGGAAGGCCAG 58.532 55.000 5.01 0.00 35.15 4.85
146 147 0.039618 CCAAAAGCTAGGGAAGGCCA 59.960 55.000 5.01 0.00 35.15 5.36
147 148 0.331616 TCCAAAAGCTAGGGAAGGCC 59.668 55.000 0.00 0.00 0.00 5.19
148 149 1.464734 GTCCAAAAGCTAGGGAAGGC 58.535 55.000 2.77 0.00 31.32 4.35
149 150 1.354368 TGGTCCAAAAGCTAGGGAAGG 59.646 52.381 2.77 0.00 31.32 3.46
150 151 2.879103 TGGTCCAAAAGCTAGGGAAG 57.121 50.000 2.77 0.00 31.32 3.46
151 152 3.825908 ATTGGTCCAAAAGCTAGGGAA 57.174 42.857 8.75 0.00 31.32 3.97
152 153 3.825908 AATTGGTCCAAAAGCTAGGGA 57.174 42.857 8.75 0.00 0.00 4.20
153 154 4.890158 AAAATTGGTCCAAAAGCTAGGG 57.110 40.909 8.75 0.00 0.00 3.53
174 175 4.935885 AACATGCTTTTTCGTGCAAAAA 57.064 31.818 0.00 0.00 42.74 1.94
175 176 4.935885 AAACATGCTTTTTCGTGCAAAA 57.064 31.818 0.00 0.00 42.74 2.44
176 177 4.935885 AAAACATGCTTTTTCGTGCAAA 57.064 31.818 0.00 0.00 42.74 3.68
177 178 4.935885 AAAAACATGCTTTTTCGTGCAA 57.064 31.818 0.92 0.00 42.74 4.08
195 196 0.250124 TGCCTCTCGCGGAAGAAAAA 60.250 50.000 6.13 0.00 42.08 1.94
196 197 0.949105 GTGCCTCTCGCGGAAGAAAA 60.949 55.000 6.13 0.00 42.08 2.29
197 198 1.374252 GTGCCTCTCGCGGAAGAAA 60.374 57.895 6.13 0.00 42.08 2.52
198 199 2.261671 GTGCCTCTCGCGGAAGAA 59.738 61.111 6.13 0.00 42.08 2.52
199 200 4.116328 CGTGCCTCTCGCGGAAGA 62.116 66.667 6.13 0.90 44.36 2.87
205 206 2.807631 TTCGTAACCGTGCCTCTCGC 62.808 60.000 0.00 0.00 38.31 5.03
206 207 0.387622 TTTCGTAACCGTGCCTCTCG 60.388 55.000 0.00 0.00 35.01 4.04
207 208 1.787012 TTTTCGTAACCGTGCCTCTC 58.213 50.000 0.00 0.00 35.01 3.20
208 209 2.243602 TTTTTCGTAACCGTGCCTCT 57.756 45.000 0.00 0.00 35.01 3.69
245 246 2.641197 GCCTCCAGCGGAAGAAAAA 58.359 52.632 0.00 0.00 0.00 1.94
246 247 4.397348 GCCTCCAGCGGAAGAAAA 57.603 55.556 0.00 0.00 0.00 2.29
255 256 2.644992 CAAAACCGTGCCTCCAGC 59.355 61.111 0.00 0.00 44.14 4.85
256 257 1.455383 AAGCAAAACCGTGCCTCCAG 61.455 55.000 0.00 0.00 46.14 3.86
257 258 1.452145 GAAGCAAAACCGTGCCTCCA 61.452 55.000 0.00 0.00 46.14 3.86
258 259 1.285950 GAAGCAAAACCGTGCCTCC 59.714 57.895 0.00 0.00 46.14 4.30
259 260 1.285950 GGAAGCAAAACCGTGCCTC 59.714 57.895 0.00 0.00 46.14 4.70
260 261 2.200337 GGGAAGCAAAACCGTGCCT 61.200 57.895 0.00 0.00 46.14 4.75
261 262 2.338620 GGGAAGCAAAACCGTGCC 59.661 61.111 0.00 0.00 46.14 5.01
262 263 2.338620 GGGGAAGCAAAACCGTGC 59.661 61.111 0.00 0.00 45.28 5.34
263 264 1.852067 CTCGGGGAAGCAAAACCGTG 61.852 60.000 9.23 4.24 46.06 4.94
264 265 1.599797 CTCGGGGAAGCAAAACCGT 60.600 57.895 9.23 0.00 46.06 4.83
266 267 0.960861 CCTCTCGGGGAAGCAAAACC 60.961 60.000 0.00 0.00 0.00 3.27
267 268 1.587043 GCCTCTCGGGGAAGCAAAAC 61.587 60.000 0.00 0.00 32.03 2.43
268 269 1.303317 GCCTCTCGGGGAAGCAAAA 60.303 57.895 0.00 0.00 32.03 2.44
269 270 1.852157 ATGCCTCTCGGGGAAGCAAA 61.852 55.000 5.07 0.00 43.54 3.68
270 271 0.980754 TATGCCTCTCGGGGAAGCAA 60.981 55.000 5.07 0.00 43.54 3.91
271 272 1.382557 TATGCCTCTCGGGGAAGCA 60.383 57.895 3.20 3.20 44.30 3.91
272 273 1.369321 CTATGCCTCTCGGGGAAGC 59.631 63.158 0.00 0.00 39.39 3.86
273 274 1.123928 AACTATGCCTCTCGGGGAAG 58.876 55.000 0.00 0.00 39.39 3.46
274 275 2.464796 TAACTATGCCTCTCGGGGAA 57.535 50.000 0.00 0.00 39.39 3.97
275 276 2.248248 CATAACTATGCCTCTCGGGGA 58.752 52.381 0.00 0.00 40.52 4.81
276 277 2.751166 CATAACTATGCCTCTCGGGG 57.249 55.000 0.00 0.00 35.12 5.73
286 287 5.753438 TGCCTCTCGTAAAAGCATAACTATG 59.247 40.000 0.00 0.00 36.78 2.23
287 288 5.914033 TGCCTCTCGTAAAAGCATAACTAT 58.086 37.500 0.00 0.00 0.00 2.12
288 289 5.333299 TGCCTCTCGTAAAAGCATAACTA 57.667 39.130 0.00 0.00 0.00 2.24
289 290 4.202245 TGCCTCTCGTAAAAGCATAACT 57.798 40.909 0.00 0.00 0.00 2.24
290 291 4.570772 TCATGCCTCTCGTAAAAGCATAAC 59.429 41.667 0.00 0.00 42.04 1.89
291 292 4.570772 GTCATGCCTCTCGTAAAAGCATAA 59.429 41.667 0.00 0.00 42.04 1.90
292 293 4.119862 GTCATGCCTCTCGTAAAAGCATA 58.880 43.478 0.00 0.00 42.04 3.14
293 294 2.939103 GTCATGCCTCTCGTAAAAGCAT 59.061 45.455 0.00 0.00 44.66 3.79
294 295 2.346803 GTCATGCCTCTCGTAAAAGCA 58.653 47.619 0.00 0.00 37.94 3.91
295 296 1.666189 GGTCATGCCTCTCGTAAAAGC 59.334 52.381 0.00 0.00 0.00 3.51
296 297 1.927174 CGGTCATGCCTCTCGTAAAAG 59.073 52.381 4.92 0.00 34.25 2.27
297 298 2.004583 CGGTCATGCCTCTCGTAAAA 57.995 50.000 4.92 0.00 34.25 1.52
298 299 0.459585 GCGGTCATGCCTCTCGTAAA 60.460 55.000 4.92 0.00 34.25 2.01
299 300 1.141019 GCGGTCATGCCTCTCGTAA 59.859 57.895 4.92 0.00 34.25 3.18
300 301 2.805546 GCGGTCATGCCTCTCGTA 59.194 61.111 4.92 0.00 34.25 3.43
301 302 4.498520 CGCGGTCATGCCTCTCGT 62.499 66.667 0.00 0.00 34.25 4.18
343 344 6.291902 GCGCGAAAGGAGAAAAATAACAAAAA 60.292 34.615 12.10 0.00 0.00 1.94
344 345 5.174216 GCGCGAAAGGAGAAAAATAACAAAA 59.826 36.000 12.10 0.00 0.00 2.44
345 346 4.677832 GCGCGAAAGGAGAAAAATAACAAA 59.322 37.500 12.10 0.00 0.00 2.83
346 347 4.223659 GCGCGAAAGGAGAAAAATAACAA 58.776 39.130 12.10 0.00 0.00 2.83
347 348 3.665848 CGCGCGAAAGGAGAAAAATAACA 60.666 43.478 28.94 0.00 0.00 2.41
348 349 2.838452 CGCGCGAAAGGAGAAAAATAAC 59.162 45.455 28.94 0.00 0.00 1.89
349 350 2.737783 TCGCGCGAAAGGAGAAAAATAA 59.262 40.909 32.97 0.19 0.00 1.40
350 351 2.339418 TCGCGCGAAAGGAGAAAAATA 58.661 42.857 32.97 1.01 0.00 1.40
351 352 1.128692 CTCGCGCGAAAGGAGAAAAAT 59.871 47.619 33.99 0.00 0.00 1.82
352 353 0.511221 CTCGCGCGAAAGGAGAAAAA 59.489 50.000 33.99 6.60 0.00 1.94
353 354 1.289109 CCTCGCGCGAAAGGAGAAAA 61.289 55.000 33.99 7.18 34.35 2.29
354 355 1.736645 CCTCGCGCGAAAGGAGAAA 60.737 57.895 33.99 8.02 34.35 2.52
355 356 2.126071 CCTCGCGCGAAAGGAGAA 60.126 61.111 33.99 8.84 34.35 2.87
356 357 4.796231 GCCTCGCGCGAAAGGAGA 62.796 66.667 34.25 13.16 34.35 3.71
358 359 4.451150 ATGCCTCGCGCGAAAGGA 62.451 61.111 34.25 28.45 42.08 3.36
359 360 4.228097 CATGCCTCGCGCGAAAGG 62.228 66.667 33.99 30.75 42.08 3.11
360 361 4.228097 CCATGCCTCGCGCGAAAG 62.228 66.667 33.99 27.08 42.08 2.62
364 365 4.817063 CAAACCATGCCTCGCGCG 62.817 66.667 26.76 26.76 42.08 6.86
373 374 1.466167 CTCTCACGGAAGCAAACCATG 59.534 52.381 0.00 0.00 0.00 3.66
374 375 1.813513 CTCTCACGGAAGCAAACCAT 58.186 50.000 0.00 0.00 0.00 3.55
375 376 0.884704 GCTCTCACGGAAGCAAACCA 60.885 55.000 0.00 0.00 0.00 3.67
376 377 1.578206 GGCTCTCACGGAAGCAAACC 61.578 60.000 0.00 0.00 0.00 3.27
377 378 0.884704 TGGCTCTCACGGAAGCAAAC 60.885 55.000 0.00 0.00 0.00 2.93
378 379 0.884704 GTGGCTCTCACGGAAGCAAA 60.885 55.000 0.00 0.00 36.56 3.68
379 380 1.301716 GTGGCTCTCACGGAAGCAA 60.302 57.895 0.00 0.00 36.56 3.91
380 381 2.343758 GTGGCTCTCACGGAAGCA 59.656 61.111 0.00 0.00 36.56 3.91
387 388 2.430921 CACGACCGTGGCTCTCAC 60.431 66.667 14.12 0.00 42.00 3.51
396 397 0.101040 TCTCACGAAAACACGACCGT 59.899 50.000 0.00 0.00 37.03 4.83
397 398 0.776451 CTCTCACGAAAACACGACCG 59.224 55.000 0.00 0.00 37.03 4.79
398 399 1.137513 CCTCTCACGAAAACACGACC 58.862 55.000 0.00 0.00 37.03 4.79
399 400 0.507358 GCCTCTCACGAAAACACGAC 59.493 55.000 0.00 0.00 37.03 4.34
400 401 0.103390 TGCCTCTCACGAAAACACGA 59.897 50.000 0.00 0.00 37.03 4.35
401 402 1.136252 CATGCCTCTCACGAAAACACG 60.136 52.381 0.00 0.00 39.31 4.49
402 403 1.197721 CCATGCCTCTCACGAAAACAC 59.802 52.381 0.00 0.00 0.00 3.32
403 404 1.522668 CCATGCCTCTCACGAAAACA 58.477 50.000 0.00 0.00 0.00 2.83
404 405 0.169009 GCCATGCCTCTCACGAAAAC 59.831 55.000 0.00 0.00 0.00 2.43
405 406 0.960364 GGCCATGCCTCTCACGAAAA 60.960 55.000 0.00 0.00 46.69 2.29
406 407 1.377202 GGCCATGCCTCTCACGAAA 60.377 57.895 0.00 0.00 46.69 3.46
407 408 2.268920 GGCCATGCCTCTCACGAA 59.731 61.111 0.00 0.00 46.69 3.85
452 453 2.632136 TTCGAAAGTGGCACGGACGT 62.632 55.000 23.33 0.00 0.00 4.34
453 454 1.492319 TTTCGAAAGTGGCACGGACG 61.492 55.000 20.39 20.39 0.00 4.79
454 455 0.658897 TTTTCGAAAGTGGCACGGAC 59.341 50.000 12.71 6.46 0.00 4.79
455 456 0.941542 CTTTTCGAAAGTGGCACGGA 59.058 50.000 12.71 5.84 0.00 4.69
456 457 0.040425 CCTTTTCGAAAGTGGCACGG 60.040 55.000 12.71 3.39 0.00 4.94
457 458 0.941542 TCCTTTTCGAAAGTGGCACG 59.058 50.000 20.45 0.00 0.00 5.34
458 459 3.430333 TTTCCTTTTCGAAAGTGGCAC 57.570 42.857 20.45 10.29 0.00 5.01
459 460 4.457834 TTTTTCCTTTTCGAAAGTGGCA 57.542 36.364 20.45 11.77 33.46 4.92
478 479 2.100087 ACCGAACCGAAAGCACATTTTT 59.900 40.909 0.00 0.00 0.00 1.94
479 480 1.679153 ACCGAACCGAAAGCACATTTT 59.321 42.857 0.00 0.00 0.00 1.82
480 481 1.314730 ACCGAACCGAAAGCACATTT 58.685 45.000 0.00 0.00 0.00 2.32
481 482 1.314730 AACCGAACCGAAAGCACATT 58.685 45.000 0.00 0.00 0.00 2.71
482 483 1.314730 AAACCGAACCGAAAGCACAT 58.685 45.000 0.00 0.00 0.00 3.21
483 484 1.096416 AAAACCGAACCGAAAGCACA 58.904 45.000 0.00 0.00 0.00 4.57
484 485 2.197792 AAAAACCGAACCGAAAGCAC 57.802 45.000 0.00 0.00 0.00 4.40
511 512 8.901748 CGATGTTGATAAGTTTTGACGAATTTT 58.098 29.630 0.00 0.00 0.00 1.82
512 513 7.537306 CCGATGTTGATAAGTTTTGACGAATTT 59.463 33.333 0.00 0.00 0.00 1.82
513 514 7.021196 CCGATGTTGATAAGTTTTGACGAATT 58.979 34.615 0.00 0.00 0.00 2.17
514 515 6.370442 TCCGATGTTGATAAGTTTTGACGAAT 59.630 34.615 0.00 0.00 0.00 3.34
515 516 5.697178 TCCGATGTTGATAAGTTTTGACGAA 59.303 36.000 0.00 0.00 0.00 3.85
516 517 5.231702 TCCGATGTTGATAAGTTTTGACGA 58.768 37.500 0.00 0.00 0.00 4.20
517 518 5.524511 TCCGATGTTGATAAGTTTTGACG 57.475 39.130 0.00 0.00 0.00 4.35
518 519 7.308782 AGATCCGATGTTGATAAGTTTTGAC 57.691 36.000 0.00 0.00 0.00 3.18
519 520 8.258007 ACTAGATCCGATGTTGATAAGTTTTGA 58.742 33.333 0.00 0.00 0.00 2.69
520 521 8.425577 ACTAGATCCGATGTTGATAAGTTTTG 57.574 34.615 0.00 0.00 0.00 2.44
521 522 9.449719 AAACTAGATCCGATGTTGATAAGTTTT 57.550 29.630 0.00 0.00 36.30 2.43
522 523 9.449719 AAAACTAGATCCGATGTTGATAAGTTT 57.550 29.630 0.00 0.00 38.66 2.66
528 529 9.838339 ATCTTTAAAACTAGATCCGATGTTGAT 57.162 29.630 0.00 0.00 0.00 2.57
529 530 9.314321 GATCTTTAAAACTAGATCCGATGTTGA 57.686 33.333 0.00 0.00 40.45 3.18
530 531 9.319143 AGATCTTTAAAACTAGATCCGATGTTG 57.681 33.333 10.09 0.00 45.05 3.33
531 532 9.319143 CAGATCTTTAAAACTAGATCCGATGTT 57.681 33.333 10.09 0.00 45.05 2.71
532 533 7.928706 CCAGATCTTTAAAACTAGATCCGATGT 59.071 37.037 10.09 0.00 45.05 3.06
533 534 8.144478 TCCAGATCTTTAAAACTAGATCCGATG 58.856 37.037 10.09 4.40 45.05 3.84
534 535 8.145122 GTCCAGATCTTTAAAACTAGATCCGAT 58.855 37.037 10.09 0.00 45.05 4.18
535 536 7.490000 GTCCAGATCTTTAAAACTAGATCCGA 58.510 38.462 10.09 5.28 45.05 4.55
536 537 6.418226 CGTCCAGATCTTTAAAACTAGATCCG 59.582 42.308 10.09 4.83 45.05 4.18
537 538 6.201234 GCGTCCAGATCTTTAAAACTAGATCC 59.799 42.308 10.09 0.00 45.05 3.36
538 539 6.074782 CGCGTCCAGATCTTTAAAACTAGATC 60.075 42.308 0.00 6.74 44.54 2.75
539 540 5.749109 CGCGTCCAGATCTTTAAAACTAGAT 59.251 40.000 0.00 0.00 33.92 1.98
540 541 5.100259 CGCGTCCAGATCTTTAAAACTAGA 58.900 41.667 0.00 0.00 0.00 2.43
541 542 5.100259 TCGCGTCCAGATCTTTAAAACTAG 58.900 41.667 5.77 0.00 0.00 2.57
542 543 5.063180 TCGCGTCCAGATCTTTAAAACTA 57.937 39.130 5.77 0.00 0.00 2.24
543 544 3.921677 TCGCGTCCAGATCTTTAAAACT 58.078 40.909 5.77 0.00 0.00 2.66
544 545 3.062234 CCTCGCGTCCAGATCTTTAAAAC 59.938 47.826 5.77 0.00 0.00 2.43
545 546 3.056393 TCCTCGCGTCCAGATCTTTAAAA 60.056 43.478 5.77 0.00 0.00 1.52
546 547 2.494471 TCCTCGCGTCCAGATCTTTAAA 59.506 45.455 5.77 0.00 0.00 1.52
547 548 2.097036 TCCTCGCGTCCAGATCTTTAA 58.903 47.619 5.77 0.00 0.00 1.52
548 549 1.404391 GTCCTCGCGTCCAGATCTTTA 59.596 52.381 5.77 0.00 0.00 1.85
549 550 0.173708 GTCCTCGCGTCCAGATCTTT 59.826 55.000 5.77 0.00 0.00 2.52
550 551 0.681564 AGTCCTCGCGTCCAGATCTT 60.682 55.000 5.77 0.00 0.00 2.40
551 552 1.077357 AGTCCTCGCGTCCAGATCT 60.077 57.895 5.77 0.00 0.00 2.75
552 553 1.357334 GAGTCCTCGCGTCCAGATC 59.643 63.158 5.77 0.00 0.00 2.75
553 554 2.122167 GGAGTCCTCGCGTCCAGAT 61.122 63.158 5.77 0.00 0.00 2.90
554 555 2.750637 GGAGTCCTCGCGTCCAGA 60.751 66.667 5.77 0.00 0.00 3.86
555 556 1.949847 ATTGGAGTCCTCGCGTCCAG 61.950 60.000 14.14 0.97 41.42 3.86
556 557 1.982395 ATTGGAGTCCTCGCGTCCA 60.982 57.895 11.33 11.01 38.65 4.02
557 558 1.519455 CATTGGAGTCCTCGCGTCC 60.519 63.158 11.33 5.78 0.00 4.79
558 559 1.519455 CCATTGGAGTCCTCGCGTC 60.519 63.158 11.33 0.00 0.00 5.19
559 560 2.283529 ACCATTGGAGTCCTCGCGT 61.284 57.895 10.37 0.00 0.00 6.01
560 561 1.811266 CACCATTGGAGTCCTCGCG 60.811 63.158 10.37 0.00 0.00 5.87
561 562 0.036388 TTCACCATTGGAGTCCTCGC 60.036 55.000 10.37 0.00 0.00 5.03
562 563 2.472695 TTTCACCATTGGAGTCCTCG 57.527 50.000 10.37 0.00 0.00 4.63
563 564 4.145052 ACTTTTTCACCATTGGAGTCCTC 58.855 43.478 10.37 0.00 0.00 3.71
564 565 4.184649 ACTTTTTCACCATTGGAGTCCT 57.815 40.909 10.37 0.00 0.00 3.85
565 566 4.937201 AACTTTTTCACCATTGGAGTCC 57.063 40.909 10.37 0.73 0.00 3.85
566 567 4.976116 CGAAACTTTTTCACCATTGGAGTC 59.024 41.667 10.37 0.00 0.00 3.36
567 568 4.642885 TCGAAACTTTTTCACCATTGGAGT 59.357 37.500 10.37 0.00 0.00 3.85
568 569 5.008613 TCTCGAAACTTTTTCACCATTGGAG 59.991 40.000 10.37 0.83 0.00 3.86
569 570 4.884744 TCTCGAAACTTTTTCACCATTGGA 59.115 37.500 10.37 0.00 0.00 3.53
570 571 5.181690 TCTCGAAACTTTTTCACCATTGG 57.818 39.130 0.00 0.00 0.00 3.16
571 572 7.306749 CCAAATCTCGAAACTTTTTCACCATTG 60.307 37.037 0.00 0.00 0.00 2.82
572 573 6.701400 CCAAATCTCGAAACTTTTTCACCATT 59.299 34.615 0.00 0.00 0.00 3.16
573 574 6.040391 TCCAAATCTCGAAACTTTTTCACCAT 59.960 34.615 0.00 0.00 0.00 3.55
574 575 5.358442 TCCAAATCTCGAAACTTTTTCACCA 59.642 36.000 0.00 0.00 0.00 4.17
575 576 5.685954 GTCCAAATCTCGAAACTTTTTCACC 59.314 40.000 0.00 0.00 0.00 4.02
576 577 5.395486 CGTCCAAATCTCGAAACTTTTTCAC 59.605 40.000 0.00 0.00 0.00 3.18
577 578 5.507077 CGTCCAAATCTCGAAACTTTTTCA 58.493 37.500 0.00 0.00 0.00 2.69
578 579 4.378910 GCGTCCAAATCTCGAAACTTTTTC 59.621 41.667 0.00 0.00 0.00 2.29
579 580 4.201970 TGCGTCCAAATCTCGAAACTTTTT 60.202 37.500 0.00 0.00 0.00 1.94
580 581 3.314080 TGCGTCCAAATCTCGAAACTTTT 59.686 39.130 0.00 0.00 0.00 2.27
581 582 2.875933 TGCGTCCAAATCTCGAAACTTT 59.124 40.909 0.00 0.00 0.00 2.66
582 583 2.223377 GTGCGTCCAAATCTCGAAACTT 59.777 45.455 0.00 0.00 0.00 2.66
583 584 1.798813 GTGCGTCCAAATCTCGAAACT 59.201 47.619 0.00 0.00 0.00 2.66
584 585 1.461888 CGTGCGTCCAAATCTCGAAAC 60.462 52.381 0.00 0.00 0.00 2.78
585 586 0.787787 CGTGCGTCCAAATCTCGAAA 59.212 50.000 0.00 0.00 0.00 3.46
586 587 1.011968 CCGTGCGTCCAAATCTCGAA 61.012 55.000 0.00 0.00 0.00 3.71
587 588 1.445410 CCGTGCGTCCAAATCTCGA 60.445 57.895 0.00 0.00 0.00 4.04
588 589 1.289109 AACCGTGCGTCCAAATCTCG 61.289 55.000 0.00 0.00 0.00 4.04
589 590 0.872388 AAACCGTGCGTCCAAATCTC 59.128 50.000 0.00 0.00 0.00 2.75
590 591 2.172851 TAAACCGTGCGTCCAAATCT 57.827 45.000 0.00 0.00 0.00 2.40
591 592 2.481185 TCTTAAACCGTGCGTCCAAATC 59.519 45.455 0.00 0.00 0.00 2.17
592 593 2.482721 CTCTTAAACCGTGCGTCCAAAT 59.517 45.455 0.00 0.00 0.00 2.32
593 594 1.868498 CTCTTAAACCGTGCGTCCAAA 59.132 47.619 0.00 0.00 0.00 3.28
594 595 1.068895 TCTCTTAAACCGTGCGTCCAA 59.931 47.619 0.00 0.00 0.00 3.53
595 596 0.675083 TCTCTTAAACCGTGCGTCCA 59.325 50.000 0.00 0.00 0.00 4.02
596 597 2.005971 ATCTCTTAAACCGTGCGTCC 57.994 50.000 0.00 0.00 0.00 4.79
597 598 5.520022 TTTTATCTCTTAAACCGTGCGTC 57.480 39.130 0.00 0.00 29.47 5.19
598 599 5.410439 ACATTTTATCTCTTAAACCGTGCGT 59.590 36.000 0.00 0.00 29.47 5.24
599 600 5.864986 ACATTTTATCTCTTAAACCGTGCG 58.135 37.500 0.00 0.00 29.47 5.34
600 601 8.424731 CAAAACATTTTATCTCTTAAACCGTGC 58.575 33.333 0.00 0.00 29.47 5.34
601 602 9.672086 TCAAAACATTTTATCTCTTAAACCGTG 57.328 29.630 0.00 0.00 29.47 4.94
644 645 4.622933 GCAACCTGTGACTTTTCCCTTTTT 60.623 41.667 0.00 0.00 0.00 1.94
645 646 3.118775 GCAACCTGTGACTTTTCCCTTTT 60.119 43.478 0.00 0.00 0.00 2.27
646 647 2.430694 GCAACCTGTGACTTTTCCCTTT 59.569 45.455 0.00 0.00 0.00 3.11
647 648 2.031870 GCAACCTGTGACTTTTCCCTT 58.968 47.619 0.00 0.00 0.00 3.95
648 649 1.692411 GCAACCTGTGACTTTTCCCT 58.308 50.000 0.00 0.00 0.00 4.20
649 650 0.310854 CGCAACCTGTGACTTTTCCC 59.689 55.000 0.00 0.00 0.00 3.97
650 651 1.305201 TCGCAACCTGTGACTTTTCC 58.695 50.000 0.00 0.00 31.05 3.13
657 658 0.176910 TCACTTGTCGCAACCTGTGA 59.823 50.000 8.16 8.16 35.60 3.58
658 659 1.069703 CATCACTTGTCGCAACCTGTG 60.070 52.381 0.00 0.00 0.00 3.66
659 660 1.229428 CATCACTTGTCGCAACCTGT 58.771 50.000 0.00 0.00 0.00 4.00
660 661 0.110056 GCATCACTTGTCGCAACCTG 60.110 55.000 0.00 0.00 0.00 4.00
661 662 0.534877 TGCATCACTTGTCGCAACCT 60.535 50.000 0.00 0.00 0.00 3.50
662 663 0.385974 GTGCATCACTTGTCGCAACC 60.386 55.000 0.00 0.00 35.87 3.77
663 664 0.307453 TGTGCATCACTTGTCGCAAC 59.693 50.000 0.00 0.00 35.87 4.17
664 665 1.069091 CATGTGCATCACTTGTCGCAA 60.069 47.619 0.00 0.00 35.64 4.85
665 666 0.518195 CATGTGCATCACTTGTCGCA 59.482 50.000 0.00 0.00 35.64 5.10
666 667 0.518636 ACATGTGCATCACTTGTCGC 59.481 50.000 0.00 0.00 45.26 5.19
667 668 2.995939 ACTACATGTGCATCACTTGTCG 59.004 45.455 17.77 14.98 45.26 4.35
668 669 4.332186 CACTACATGTGCATCACTTGTC 57.668 45.455 17.77 0.00 45.26 3.18
679 680 2.221169 ACAAGTGGTGCACTACATGTG 58.779 47.619 33.82 27.39 44.62 3.21
680 681 2.158827 TGACAAGTGGTGCACTACATGT 60.159 45.455 34.55 34.55 44.62 3.21
681 682 2.224079 GTGACAAGTGGTGCACTACATG 59.776 50.000 31.51 30.44 44.62 3.21
682 683 2.158827 TGTGACAAGTGGTGCACTACAT 60.159 45.455 31.51 19.93 44.62 2.29
683 684 1.208293 TGTGACAAGTGGTGCACTACA 59.792 47.619 31.51 13.61 44.62 2.74
684 685 1.948104 TGTGACAAGTGGTGCACTAC 58.052 50.000 24.43 24.43 44.62 2.73
685 686 2.285083 GTTGTGACAAGTGGTGCACTA 58.715 47.619 17.98 8.10 44.62 2.74
687 688 0.100503 GGTTGTGACAAGTGGTGCAC 59.899 55.000 8.80 8.80 35.84 4.57
688 689 0.034574 AGGTTGTGACAAGTGGTGCA 60.035 50.000 0.00 0.00 0.00 4.57
689 690 0.381801 CAGGTTGTGACAAGTGGTGC 59.618 55.000 0.00 0.00 0.00 5.01
690 691 1.942657 CTCAGGTTGTGACAAGTGGTG 59.057 52.381 0.00 0.00 0.00 4.17
691 692 1.747206 GCTCAGGTTGTGACAAGTGGT 60.747 52.381 0.00 0.00 0.00 4.16
692 693 0.947244 GCTCAGGTTGTGACAAGTGG 59.053 55.000 0.00 0.00 0.00 4.00
693 694 1.600957 CTGCTCAGGTTGTGACAAGTG 59.399 52.381 0.00 0.00 0.00 3.16
694 695 1.210478 ACTGCTCAGGTTGTGACAAGT 59.790 47.619 0.00 0.00 0.00 3.16
695 696 1.959042 ACTGCTCAGGTTGTGACAAG 58.041 50.000 0.00 0.00 0.00 3.16
696 697 2.016318 CAACTGCTCAGGTTGTGACAA 58.984 47.619 0.00 0.00 39.14 3.18
697 698 1.209261 TCAACTGCTCAGGTTGTGACA 59.791 47.619 1.66 0.00 42.97 3.58
698 699 1.869767 CTCAACTGCTCAGGTTGTGAC 59.130 52.381 1.66 0.00 42.97 3.67
699 700 1.762370 TCTCAACTGCTCAGGTTGTGA 59.238 47.619 1.66 6.80 42.97 3.58
700 701 2.141517 CTCTCAACTGCTCAGGTTGTG 58.858 52.381 1.66 4.84 42.97 3.33
701 702 1.765314 ACTCTCAACTGCTCAGGTTGT 59.235 47.619 1.66 0.00 42.97 3.32
702 703 2.141517 CACTCTCAACTGCTCAGGTTG 58.858 52.381 1.66 0.00 43.57 3.77
703 704 2.042464 TCACTCTCAACTGCTCAGGTT 58.958 47.619 1.66 0.00 0.00 3.50
704 705 1.709578 TCACTCTCAACTGCTCAGGT 58.290 50.000 1.66 0.00 0.00 4.00
705 706 2.496871 AGATCACTCTCAACTGCTCAGG 59.503 50.000 0.00 0.00 0.00 3.86
706 707 3.872511 AGATCACTCTCAACTGCTCAG 57.127 47.619 0.00 0.00 0.00 3.35
707 708 4.613925 AAAGATCACTCTCAACTGCTCA 57.386 40.909 0.00 0.00 0.00 4.26
708 709 7.360776 CCTTTTAAAGATCACTCTCAACTGCTC 60.361 40.741 6.24 0.00 0.00 4.26
709 710 6.429385 CCTTTTAAAGATCACTCTCAACTGCT 59.571 38.462 6.24 0.00 0.00 4.24
710 711 6.428159 TCCTTTTAAAGATCACTCTCAACTGC 59.572 38.462 6.24 0.00 0.00 4.40
711 712 7.659390 ACTCCTTTTAAAGATCACTCTCAACTG 59.341 37.037 6.24 0.00 0.00 3.16
712 713 7.740805 ACTCCTTTTAAAGATCACTCTCAACT 58.259 34.615 6.24 0.00 0.00 3.16
713 714 7.971183 ACTCCTTTTAAAGATCACTCTCAAC 57.029 36.000 6.24 0.00 0.00 3.18
714 715 8.871125 AGTACTCCTTTTAAAGATCACTCTCAA 58.129 33.333 6.24 0.00 0.00 3.02
715 716 8.423906 AGTACTCCTTTTAAAGATCACTCTCA 57.576 34.615 6.24 0.00 0.00 3.27
716 717 9.361315 GAAGTACTCCTTTTAAAGATCACTCTC 57.639 37.037 6.24 2.47 32.03 3.20
717 718 9.095700 AGAAGTACTCCTTTTAAAGATCACTCT 57.904 33.333 6.24 0.00 32.03 3.24
718 719 9.713713 AAGAAGTACTCCTTTTAAAGATCACTC 57.286 33.333 6.24 0.00 32.03 3.51
733 734 9.989869 GCAAAATCACTAATTAAGAAGTACTCC 57.010 33.333 0.00 0.00 0.00 3.85
778 779 4.044308 TCTCCTTACATTTGGGCCTGATA 58.956 43.478 4.53 0.00 0.00 2.15
1017 1022 3.118519 GGAAGCGTACCTCCTGGAATTTA 60.119 47.826 0.00 0.00 37.04 1.40
1147 1152 5.412640 TCACTCAAATCCGCGTAGAATAAA 58.587 37.500 4.92 0.00 0.00 1.40
1150 1155 3.520290 TCACTCAAATCCGCGTAGAAT 57.480 42.857 4.92 0.00 0.00 2.40
1153 1158 2.599082 GACTTCACTCAAATCCGCGTAG 59.401 50.000 4.92 0.00 0.00 3.51
1158 1163 5.362556 ACATTTGACTTCACTCAAATCCG 57.637 39.130 4.52 0.00 44.19 4.18
1177 1182 3.350992 TCATCTCCCTCCCACATACAT 57.649 47.619 0.00 0.00 0.00 2.29
1200 1205 4.889409 ACTTCCAGATGTTTCAACACACAT 59.111 37.500 0.00 0.00 42.51 3.21
1224 1230 8.690203 TGCCATAAACACATTTATACAGCTAT 57.310 30.769 0.00 0.00 38.67 2.97
1226 1232 7.255590 GGATGCCATAAACACATTTATACAGCT 60.256 37.037 8.72 0.00 38.67 4.24
1227 1233 6.863126 GGATGCCATAAACACATTTATACAGC 59.137 38.462 0.00 0.00 38.67 4.40
1249 1255 4.141620 ACCACGATTTAGAGCATTGAGGAT 60.142 41.667 0.00 0.00 0.00 3.24
1271 1278 6.877611 TTCTAACCTGGACAGAAAATCAAC 57.122 37.500 0.00 0.00 0.00 3.18
1308 1316 5.895807 TGGAACACTCTAACCTAGGACTAA 58.104 41.667 17.98 0.00 0.00 2.24
1326 1334 9.606631 ACAGAGAAGTCATATAGAAAATGGAAC 57.393 33.333 0.00 0.00 0.00 3.62
1329 1337 8.954950 ACACAGAGAAGTCATATAGAAAATGG 57.045 34.615 0.00 0.00 0.00 3.16
1360 1368 7.082602 GCTCATCTGAATTGGCAATACATAAG 58.917 38.462 14.05 7.10 0.00 1.73
1361 1369 6.546772 TGCTCATCTGAATTGGCAATACATAA 59.453 34.615 14.05 0.00 0.00 1.90
1363 1371 4.891168 TGCTCATCTGAATTGGCAATACAT 59.109 37.500 14.05 0.00 0.00 2.29
1364 1372 4.271661 TGCTCATCTGAATTGGCAATACA 58.728 39.130 14.05 0.00 0.00 2.29
1368 1376 2.751259 GTCTGCTCATCTGAATTGGCAA 59.249 45.455 0.68 0.68 0.00 4.52
1378 1386 6.183360 CCAGAGTACTAATTGTCTGCTCATCT 60.183 42.308 0.00 0.00 35.99 2.90
1379 1387 5.982516 CCAGAGTACTAATTGTCTGCTCATC 59.017 44.000 0.00 0.00 35.99 2.92
1660 1668 7.550551 CACTTCTCTATTGCCTATGAAGACAAA 59.449 37.037 0.00 0.00 36.00 2.83
1661 1669 7.044181 CACTTCTCTATTGCCTATGAAGACAA 58.956 38.462 0.00 0.00 36.00 3.18
1662 1670 6.381133 TCACTTCTCTATTGCCTATGAAGACA 59.619 38.462 0.00 0.00 36.00 3.41
1684 1692 9.696917 AAACTAAATTCCAAATGTTGATCTCAC 57.303 29.630 0.00 0.00 0.00 3.51
1816 1824 2.102252 GAGGCTTGATCCTTCAGTCGAT 59.898 50.000 0.00 0.00 36.38 3.59
2795 2803 6.518369 CGAGCCTAATTTGGATGATACAGGTA 60.518 42.308 10.34 0.00 0.00 3.08
2883 2891 6.100004 TCTAAAGTATCTTTGGTCGCTGAAG 58.900 40.000 5.19 0.00 0.00 3.02
3111 3120 6.898041 TCAAAGAAACCGTGAAAGTATGATG 58.102 36.000 0.00 0.00 0.00 3.07
3433 3442 4.572985 TTCAGTTCGAGTTAAAGGTCGA 57.427 40.909 2.56 2.56 43.25 4.20
3639 3648 1.811965 AGCTGTTGCACGCATCAATTA 59.188 42.857 4.49 0.00 42.74 1.40
3643 3652 1.009078 GATAGCTGTTGCACGCATCA 58.991 50.000 0.00 3.00 42.74 3.07
3730 3739 2.711009 TGGATCTGAACCATCCCATACC 59.289 50.000 2.09 0.00 39.43 2.73
3731 3740 3.392616 ACTGGATCTGAACCATCCCATAC 59.607 47.826 7.14 0.00 39.43 2.39
3842 3851 2.102252 GCACATCCCCAAAGTTTTCACA 59.898 45.455 0.00 0.00 0.00 3.58
3853 3862 1.303236 CCGTTCAAGCACATCCCCA 60.303 57.895 0.00 0.00 0.00 4.96
3923 3932 3.072944 GGCAGATCATGACATTAGGAGC 58.927 50.000 0.00 0.00 36.67 4.70
4000 4009 1.515521 CGGGCTCTTCACCACCAAAC 61.516 60.000 0.00 0.00 0.00 2.93
4292 4301 4.393990 CCCTGTTTAAATCCGGTTACTGAC 59.606 45.833 0.00 0.00 0.00 3.51
4319 4328 0.682852 CCGGTTACTGGAGTTCACCA 59.317 55.000 3.71 0.00 38.33 4.17
4320 4329 0.971386 TCCGGTTACTGGAGTTCACC 59.029 55.000 9.15 0.00 0.00 4.02
4321 4330 3.329929 AATCCGGTTACTGGAGTTCAC 57.670 47.619 18.52 0.00 39.30 3.18
4322 4331 5.486735 TTAAATCCGGTTACTGGAGTTCA 57.513 39.130 26.21 15.11 42.35 3.18
4323 4332 5.702209 TGTTTAAATCCGGTTACTGGAGTTC 59.298 40.000 26.21 14.55 42.35 3.01
4324 4333 5.623169 TGTTTAAATCCGGTTACTGGAGTT 58.377 37.500 25.81 25.81 45.05 3.01
4325 4334 5.231702 TGTTTAAATCCGGTTACTGGAGT 57.768 39.130 18.52 13.34 39.30 3.85
4326 4335 4.634443 CCTGTTTAAATCCGGTTACTGGAG 59.366 45.833 18.52 2.26 39.30 3.86
4327 4336 4.566070 CCCTGTTTAAATCCGGTTACTGGA 60.566 45.833 15.99 15.99 40.46 3.86
4328 4337 3.692593 CCCTGTTTAAATCCGGTTACTGG 59.307 47.826 3.32 3.32 0.00 4.00
4329 4338 3.128068 GCCCTGTTTAAATCCGGTTACTG 59.872 47.826 0.00 0.00 0.00 2.74
4330 4339 3.244981 TGCCCTGTTTAAATCCGGTTACT 60.245 43.478 0.00 0.00 0.00 2.24
4331 4340 3.083293 TGCCCTGTTTAAATCCGGTTAC 58.917 45.455 0.00 0.00 0.00 2.50
4332 4341 3.083293 GTGCCCTGTTTAAATCCGGTTA 58.917 45.455 0.00 0.00 0.00 2.85
4333 4342 1.890489 GTGCCCTGTTTAAATCCGGTT 59.110 47.619 0.00 0.00 0.00 4.44
4334 4343 1.074889 AGTGCCCTGTTTAAATCCGGT 59.925 47.619 0.00 0.00 0.00 5.28
4335 4344 1.472480 CAGTGCCCTGTTTAAATCCGG 59.528 52.381 0.00 0.00 33.80 5.14
4336 4345 1.472480 CCAGTGCCCTGTTTAAATCCG 59.528 52.381 0.00 0.00 36.95 4.18
4337 4346 2.231235 CACCAGTGCCCTGTTTAAATCC 59.769 50.000 0.00 0.00 36.95 3.01
4338 4347 3.153919 TCACCAGTGCCCTGTTTAAATC 58.846 45.455 0.00 0.00 36.95 2.17
4339 4348 3.237268 TCACCAGTGCCCTGTTTAAAT 57.763 42.857 0.00 0.00 36.95 1.40
4340 4349 2.691011 GTTCACCAGTGCCCTGTTTAAA 59.309 45.455 0.00 0.00 36.95 1.52
4341 4350 2.092103 AGTTCACCAGTGCCCTGTTTAA 60.092 45.455 0.00 0.00 36.95 1.52
4342 4351 1.493022 AGTTCACCAGTGCCCTGTTTA 59.507 47.619 0.00 0.00 36.95 2.01
4343 4352 0.258774 AGTTCACCAGTGCCCTGTTT 59.741 50.000 0.00 0.00 36.95 2.83
4344 4353 0.179018 GAGTTCACCAGTGCCCTGTT 60.179 55.000 0.00 0.00 36.95 3.16
4345 4354 1.451936 GAGTTCACCAGTGCCCTGT 59.548 57.895 0.00 0.00 36.95 4.00
4346 4355 1.302832 GGAGTTCACCAGTGCCCTG 60.303 63.158 0.00 0.00 38.50 4.45
4347 4356 1.770110 TGGAGTTCACCAGTGCCCT 60.770 57.895 0.00 0.00 34.77 5.19
4348 4357 2.836154 TGGAGTTCACCAGTGCCC 59.164 61.111 0.00 0.00 34.77 5.36
4376 4385 5.324409 ACTGAAACATAGAAAGAATGGCCA 58.676 37.500 8.56 8.56 0.00 5.36
4414 4429 4.375272 CAAGAAGAGTTCAGCAGAGACAA 58.625 43.478 0.00 0.00 0.00 3.18
4435 4450 1.189752 TTGCCACAAAAAGACCTGCA 58.810 45.000 0.00 0.00 0.00 4.41
4443 4458 6.655003 TGGTGTTCTTTTTATTGCCACAAAAA 59.345 30.769 0.00 0.00 33.73 1.94
4501 4516 5.008613 CCTTACAACAACGGGATGGATAATG 59.991 44.000 0.00 0.00 0.00 1.90
4687 4704 3.866910 TGTAAGACGTTTTGGACACTGTC 59.133 43.478 0.83 0.00 0.00 3.51
4712 4729 8.225416 AGTCTGTACATACTCCCTATGTATCAA 58.775 37.037 8.03 0.00 45.88 2.57
4713 4730 7.756614 AGTCTGTACATACTCCCTATGTATCA 58.243 38.462 8.03 4.20 45.88 2.15
4714 4731 8.516234 CAAGTCTGTACATACTCCCTATGTATC 58.484 40.741 13.69 0.75 45.88 2.24
4715 4732 7.451877 CCAAGTCTGTACATACTCCCTATGTAT 59.548 40.741 13.69 0.00 45.88 2.29
4716 4733 6.776116 CCAAGTCTGTACATACTCCCTATGTA 59.224 42.308 13.69 0.00 43.24 2.29
4717 4734 5.598830 CCAAGTCTGTACATACTCCCTATGT 59.401 44.000 13.69 0.00 46.21 2.29
4718 4735 5.011125 CCCAAGTCTGTACATACTCCCTATG 59.989 48.000 13.69 8.30 38.65 2.23
4719 4736 5.103215 TCCCAAGTCTGTACATACTCCCTAT 60.103 44.000 13.69 0.00 0.00 2.57
4720 4737 4.231195 TCCCAAGTCTGTACATACTCCCTA 59.769 45.833 13.69 0.00 0.00 3.53
4721 4738 3.012502 TCCCAAGTCTGTACATACTCCCT 59.987 47.826 13.69 0.00 0.00 4.20
4722 4739 3.371965 TCCCAAGTCTGTACATACTCCC 58.628 50.000 13.69 0.00 0.00 4.30
4723 4740 4.024670 ACTCCCAAGTCTGTACATACTCC 58.975 47.826 13.69 0.00 0.00 3.85
4724 4741 5.394333 GGAACTCCCAAGTCTGTACATACTC 60.394 48.000 13.69 0.48 33.48 2.59
4725 4742 4.466726 GGAACTCCCAAGTCTGTACATACT 59.533 45.833 8.03 8.03 33.48 2.12
4726 4743 4.222145 TGGAACTCCCAAGTCTGTACATAC 59.778 45.833 3.27 3.27 43.29 2.39
4727 4744 4.422057 TGGAACTCCCAAGTCTGTACATA 58.578 43.478 0.00 0.00 43.29 2.29
4728 4745 3.248024 TGGAACTCCCAAGTCTGTACAT 58.752 45.455 0.00 0.00 43.29 2.29
4729 4746 2.684943 TGGAACTCCCAAGTCTGTACA 58.315 47.619 0.00 0.00 43.29 2.90
4768 4785 0.174845 TACTCCACGGCAGGAAATCG 59.825 55.000 0.00 0.00 37.20 3.34
4772 4789 1.229082 ACCTACTCCACGGCAGGAA 60.229 57.895 5.51 0.00 37.20 3.36
4847 4864 3.385193 TCAGATGTATGTATGGCCACG 57.615 47.619 8.16 0.00 0.00 4.94
4856 4873 5.363562 TCTCCAATGCTTCAGATGTATGT 57.636 39.130 0.00 0.00 0.00 2.29
4968 4993 0.465460 AAGCCAACTGCACGGAAGAA 60.465 50.000 0.00 0.00 44.83 2.52
5034 5059 4.281688 GGATGAGATGAGGAAGAGAAGAGG 59.718 50.000 0.00 0.00 0.00 3.69
5135 5165 0.320073 TCGGCAAGACAACTTACCCG 60.320 55.000 0.00 0.00 44.22 5.28
5164 5194 2.167861 GCTCTTTCGGTGCGGCTAG 61.168 63.158 0.00 0.00 0.00 3.42
5188 5218 4.444720 GCCTTATGATCTTACCGAAGAACG 59.555 45.833 0.00 0.00 44.85 3.95
5189 5219 5.463724 CAGCCTTATGATCTTACCGAAGAAC 59.536 44.000 0.00 0.00 44.85 3.01
5195 5225 3.069586 TCACCAGCCTTATGATCTTACCG 59.930 47.826 0.00 0.00 0.00 4.02
5210 5240 0.895100 TCTTGCCCATTGTCACCAGC 60.895 55.000 0.00 0.00 0.00 4.85
5211 5241 1.270550 GTTCTTGCCCATTGTCACCAG 59.729 52.381 0.00 0.00 0.00 4.00
5212 5242 1.327303 GTTCTTGCCCATTGTCACCA 58.673 50.000 0.00 0.00 0.00 4.17
5213 5243 1.327303 TGTTCTTGCCCATTGTCACC 58.673 50.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.