Multiple sequence alignment - TraesCS6D01G214700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G214700 chr6D 100.000 3186 0 0 1 3186 305171581 305174766 0.000000e+00 5884.0
1 TraesCS6D01G214700 chr6D 97.368 76 2 0 2418 2493 305174073 305173998 2.580000e-26 130.0
2 TraesCS6D01G214700 chr6D 95.122 41 1 1 2669 2708 72021723 72021763 2.650000e-06 63.9
3 TraesCS6D01G214700 chr6D 86.792 53 3 3 2656 2707 122970294 122970343 4.440000e-04 56.5
4 TraesCS6D01G214700 chr6B 93.538 2445 68 33 318 2711 471677596 471675191 0.000000e+00 3557.0
5 TraesCS6D01G214700 chr6B 94.017 468 19 7 2713 3171 471675144 471674677 0.000000e+00 701.0
6 TraesCS6D01G214700 chr6B 88.776 98 9 2 2936 3032 471674473 471674377 5.580000e-23 119.0
7 TraesCS6D01G214700 chr6B 90.476 63 6 0 265 327 471680311 471680249 2.040000e-12 84.2
8 TraesCS6D01G214700 chr6A 91.754 2486 69 41 283 2711 409433097 409430691 0.000000e+00 3330.0
9 TraesCS6D01G214700 chr6A 92.577 485 25 8 2713 3186 409430644 409430160 0.000000e+00 686.0
10 TraesCS6D01G214700 chr6A 90.361 83 5 2 2418 2500 63605520 63605441 4.350000e-19 106.0
11 TraesCS6D01G214700 chr6A 91.489 47 2 2 2664 2708 88767576 88767622 2.650000e-06 63.9
12 TraesCS6D01G214700 chr2A 85.229 677 69 12 1200 1862 618982493 618981834 0.000000e+00 667.0
13 TraesCS6D01G214700 chr2A 84.838 277 37 4 1 272 459017276 459017000 1.130000e-69 274.0
14 TraesCS6D01G214700 chr2B 86.248 589 67 4 1287 1862 557815959 557815372 7.500000e-176 627.0
15 TraesCS6D01G214700 chr2D 83.752 677 79 14 1200 1862 476696894 476696235 2.100000e-171 612.0
16 TraesCS6D01G214700 chr2D 85.401 274 35 4 1 269 618294504 618294777 2.420000e-71 279.0
17 TraesCS6D01G214700 chr2D 97.436 39 1 0 2673 2711 548076790 548076828 2.050000e-07 67.6
18 TraesCS6D01G214700 chr4D 86.447 273 33 4 1 269 226455314 226455042 2.400000e-76 296.0
19 TraesCS6D01G214700 chr4D 85.294 272 31 7 1 269 82144722 82144987 4.050000e-69 272.0
20 TraesCS6D01G214700 chr4D 93.750 80 3 1 2416 2493 211051595 211051516 5.580000e-23 119.0
21 TraesCS6D01G214700 chr1D 86.312 263 33 3 1 261 8279373 8279634 1.870000e-72 283.0
22 TraesCS6D01G214700 chr5D 85.714 273 32 6 1 269 88467975 88467706 6.730000e-72 281.0
23 TraesCS6D01G214700 chr5D 100.000 35 0 0 2676 2710 315925598 315925632 7.380000e-07 65.8
24 TraesCS6D01G214700 chr7B 84.982 273 38 3 1 271 63980417 63980146 1.130000e-69 274.0
25 TraesCS6D01G214700 chr5B 86.747 249 27 4 25 269 115417927 115417681 4.050000e-69 272.0
26 TraesCS6D01G214700 chr5B 93.590 78 2 3 2418 2494 479643540 479643615 2.600000e-21 113.0
27 TraesCS6D01G214700 chr5B 95.238 42 1 1 2669 2709 428128994 428128953 7.380000e-07 65.8
28 TraesCS6D01G214700 chr7A 84.727 275 36 6 1 270 223684559 223684286 1.460000e-68 270.0
29 TraesCS6D01G214700 chr7D 93.506 77 1 2 2421 2493 5041244 5041168 9.340000e-21 111.0
30 TraesCS6D01G214700 chr7D 92.405 79 2 1 2416 2490 5041166 5041244 3.360000e-20 110.0
31 TraesCS6D01G214700 chr1A 88.636 88 6 2 2418 2501 165176838 165176751 1.560000e-18 104.0
32 TraesCS6D01G214700 chr3D 97.297 37 1 0 2671 2707 463535582 463535618 2.650000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G214700 chr6D 305171581 305174766 3185 False 5884.0 5884 100.00000 1 3186 1 chr6D.!!$F3 3185
1 TraesCS6D01G214700 chr6B 471674377 471680311 5934 True 1115.3 3557 91.70175 265 3171 4 chr6B.!!$R1 2906
2 TraesCS6D01G214700 chr6A 409430160 409433097 2937 True 2008.0 3330 92.16550 283 3186 2 chr6A.!!$R2 2903
3 TraesCS6D01G214700 chr2A 618981834 618982493 659 True 667.0 667 85.22900 1200 1862 1 chr2A.!!$R2 662
4 TraesCS6D01G214700 chr2B 557815372 557815959 587 True 627.0 627 86.24800 1287 1862 1 chr2B.!!$R1 575
5 TraesCS6D01G214700 chr2D 476696235 476696894 659 True 612.0 612 83.75200 1200 1862 1 chr2D.!!$R1 662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
100 101 0.036388 TGCGCTTTTAGTGGGAGGAG 60.036 55.0 9.73 0.0 0.0 3.69 F
221 222 0.036765 GTGCGTGTTCATAGGGGTGA 60.037 55.0 0.00 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2004 4709 1.330655 ACATAGCCACCGGACTCAGG 61.331 60.0 9.46 2.57 0.0 3.86 R
2245 4953 5.927689 CACAAAGCAAAGAAAATCCTATGCA 59.072 36.0 0.00 0.00 36.3 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.885814 GGGACAGCGATATCCCCA 58.114 61.111 5.47 0.00 37.04 4.96
18 19 1.674057 GGGACAGCGATATCCCCAG 59.326 63.158 5.47 0.00 37.04 4.45
19 20 1.122019 GGGACAGCGATATCCCCAGT 61.122 60.000 5.47 0.00 37.04 4.00
20 21 0.759346 GGACAGCGATATCCCCAGTT 59.241 55.000 0.00 0.00 0.00 3.16
21 22 1.141053 GGACAGCGATATCCCCAGTTT 59.859 52.381 0.00 0.00 0.00 2.66
22 23 2.367567 GGACAGCGATATCCCCAGTTTA 59.632 50.000 0.00 0.00 0.00 2.01
23 24 3.008049 GGACAGCGATATCCCCAGTTTAT 59.992 47.826 0.00 0.00 0.00 1.40
24 25 4.246458 GACAGCGATATCCCCAGTTTATC 58.754 47.826 0.00 0.00 0.00 1.75
25 26 3.646162 ACAGCGATATCCCCAGTTTATCA 59.354 43.478 0.00 0.00 0.00 2.15
26 27 4.248859 CAGCGATATCCCCAGTTTATCAG 58.751 47.826 0.00 0.00 0.00 2.90
27 28 3.261897 AGCGATATCCCCAGTTTATCAGG 59.738 47.826 0.00 0.00 0.00 3.86
28 29 3.619979 GCGATATCCCCAGTTTATCAGGG 60.620 52.174 0.00 0.00 41.84 4.45
29 30 3.583086 CGATATCCCCAGTTTATCAGGGT 59.417 47.826 0.00 0.00 40.75 4.34
30 31 4.041691 CGATATCCCCAGTTTATCAGGGTT 59.958 45.833 0.00 0.00 40.75 4.11
31 32 3.953542 ATCCCCAGTTTATCAGGGTTC 57.046 47.619 0.00 0.00 40.75 3.62
32 33 2.638325 TCCCCAGTTTATCAGGGTTCA 58.362 47.619 0.00 0.00 40.75 3.18
33 34 2.990284 TCCCCAGTTTATCAGGGTTCAA 59.010 45.455 0.00 0.00 40.75 2.69
34 35 3.010138 TCCCCAGTTTATCAGGGTTCAAG 59.990 47.826 0.00 0.00 40.75 3.02
35 36 3.245264 CCCCAGTTTATCAGGGTTCAAGT 60.245 47.826 0.00 0.00 40.75 3.16
36 37 4.010349 CCCAGTTTATCAGGGTTCAAGTC 58.990 47.826 0.00 0.00 37.98 3.01
37 38 4.010349 CCAGTTTATCAGGGTTCAAGTCC 58.990 47.826 0.00 0.00 0.00 3.85
38 39 4.263506 CCAGTTTATCAGGGTTCAAGTCCT 60.264 45.833 0.00 0.00 0.00 3.85
42 43 3.329300 CAGGGTTCAAGTCCTGGTG 57.671 57.895 0.00 0.00 44.99 4.17
43 44 0.890996 CAGGGTTCAAGTCCTGGTGC 60.891 60.000 0.00 0.00 44.99 5.01
44 45 1.062488 AGGGTTCAAGTCCTGGTGCT 61.062 55.000 0.00 0.00 31.11 4.40
45 46 0.606673 GGGTTCAAGTCCTGGTGCTC 60.607 60.000 0.00 0.00 0.00 4.26
46 47 0.951040 GGTTCAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
47 48 1.301716 TTCAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
48 49 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
49 50 1.376424 CAAGTCCTGGTGCTCGCAT 60.376 57.895 0.00 0.00 0.00 4.73
50 51 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
51 52 0.613260 AAGTCCTGGTGCTCGCATTA 59.387 50.000 0.00 0.00 0.00 1.90
52 53 0.833287 AGTCCTGGTGCTCGCATTAT 59.167 50.000 0.00 0.00 0.00 1.28
53 54 1.210478 AGTCCTGGTGCTCGCATTATT 59.790 47.619 0.00 0.00 0.00 1.40
54 55 1.599542 GTCCTGGTGCTCGCATTATTC 59.400 52.381 0.00 0.00 0.00 1.75
55 56 1.209261 TCCTGGTGCTCGCATTATTCA 59.791 47.619 0.00 0.00 0.00 2.57
56 57 2.158769 TCCTGGTGCTCGCATTATTCAT 60.159 45.455 0.00 0.00 0.00 2.57
57 58 2.031420 CCTGGTGCTCGCATTATTCATG 60.031 50.000 0.00 0.00 35.73 3.07
58 59 1.948834 TGGTGCTCGCATTATTCATGG 59.051 47.619 0.00 0.00 32.81 3.66
59 60 2.221169 GGTGCTCGCATTATTCATGGA 58.779 47.619 0.00 0.00 32.81 3.41
60 61 2.816087 GGTGCTCGCATTATTCATGGAT 59.184 45.455 0.00 0.00 32.81 3.41
61 62 3.254166 GGTGCTCGCATTATTCATGGATT 59.746 43.478 0.00 0.00 32.81 3.01
62 63 4.261741 GGTGCTCGCATTATTCATGGATTT 60.262 41.667 0.00 0.00 32.81 2.17
63 64 5.048782 GGTGCTCGCATTATTCATGGATTTA 60.049 40.000 0.00 0.00 32.81 1.40
64 65 6.349611 GGTGCTCGCATTATTCATGGATTTAT 60.350 38.462 0.00 0.00 32.81 1.40
65 66 7.086376 GTGCTCGCATTATTCATGGATTTATT 58.914 34.615 0.00 0.00 32.81 1.40
66 67 7.596248 GTGCTCGCATTATTCATGGATTTATTT 59.404 33.333 0.00 0.00 32.81 1.40
67 68 7.809331 TGCTCGCATTATTCATGGATTTATTTC 59.191 33.333 0.00 0.00 32.81 2.17
68 69 7.809331 GCTCGCATTATTCATGGATTTATTTCA 59.191 33.333 0.00 0.00 32.81 2.69
69 70 9.338291 CTCGCATTATTCATGGATTTATTTCAG 57.662 33.333 0.00 0.00 32.81 3.02
70 71 8.298854 TCGCATTATTCATGGATTTATTTCAGG 58.701 33.333 0.00 0.00 32.81 3.86
71 72 8.298854 CGCATTATTCATGGATTTATTTCAGGA 58.701 33.333 0.00 0.00 32.81 3.86
77 78 7.275888 TCATGGATTTATTTCAGGATTTCGG 57.724 36.000 0.00 0.00 0.00 4.30
78 79 5.514274 TGGATTTATTTCAGGATTTCGGC 57.486 39.130 0.00 0.00 0.00 5.54
79 80 4.036262 TGGATTTATTTCAGGATTTCGGCG 59.964 41.667 0.00 0.00 0.00 6.46
80 81 4.274950 GGATTTATTTCAGGATTTCGGCGA 59.725 41.667 4.99 4.99 0.00 5.54
81 82 5.048713 GGATTTATTTCAGGATTTCGGCGAT 60.049 40.000 11.76 0.00 0.00 4.58
82 83 4.811555 TTATTTCAGGATTTCGGCGATG 57.188 40.909 11.76 5.65 0.00 3.84
83 84 0.732571 TTTCAGGATTTCGGCGATGC 59.267 50.000 11.76 1.21 0.00 3.91
84 85 1.428370 TTCAGGATTTCGGCGATGCG 61.428 55.000 11.76 0.00 0.00 4.73
96 97 2.762360 CGATGCGCTTTTAGTGGGA 58.238 52.632 9.73 0.00 0.00 4.37
97 98 0.652592 CGATGCGCTTTTAGTGGGAG 59.347 55.000 9.73 0.00 0.00 4.30
98 99 1.017387 GATGCGCTTTTAGTGGGAGG 58.983 55.000 9.73 0.00 0.00 4.30
99 100 0.618458 ATGCGCTTTTAGTGGGAGGA 59.382 50.000 9.73 0.00 0.00 3.71
100 101 0.036388 TGCGCTTTTAGTGGGAGGAG 60.036 55.000 9.73 0.00 0.00 3.69
101 102 0.249398 GCGCTTTTAGTGGGAGGAGA 59.751 55.000 0.00 0.00 0.00 3.71
102 103 2.007547 GCGCTTTTAGTGGGAGGAGAC 61.008 57.143 0.00 0.00 0.00 3.36
103 104 1.736032 CGCTTTTAGTGGGAGGAGACG 60.736 57.143 0.00 0.00 0.00 4.18
104 105 1.275573 GCTTTTAGTGGGAGGAGACGT 59.724 52.381 0.00 0.00 0.00 4.34
105 106 2.289506 GCTTTTAGTGGGAGGAGACGTT 60.290 50.000 0.00 0.00 0.00 3.99
106 107 3.586892 CTTTTAGTGGGAGGAGACGTTC 58.413 50.000 0.00 0.00 0.00 3.95
114 115 4.885157 GGAGACGTTCCCTTCGAC 57.115 61.111 0.00 0.00 40.37 4.20
115 116 1.154073 GGAGACGTTCCCTTCGACG 60.154 63.158 0.00 0.00 44.34 5.12
116 117 1.580845 GGAGACGTTCCCTTCGACGA 61.581 60.000 0.00 0.00 41.53 4.20
117 118 0.454117 GAGACGTTCCCTTCGACGAC 60.454 60.000 0.00 0.00 41.53 4.34
118 119 1.795177 GACGTTCCCTTCGACGACG 60.795 63.158 0.00 0.00 41.53 5.12
127 128 2.125952 TCGACGACGAGACGCCTA 60.126 61.111 5.75 0.00 43.81 3.93
128 129 1.520120 TCGACGACGAGACGCCTAT 60.520 57.895 5.75 0.00 43.81 2.57
129 130 0.249031 TCGACGACGAGACGCCTATA 60.249 55.000 5.75 0.00 43.81 1.31
130 131 0.161235 CGACGACGAGACGCCTATAG 59.839 60.000 0.00 0.00 42.66 1.31
131 132 0.110733 GACGACGAGACGCCTATAGC 60.111 60.000 0.00 0.00 36.70 2.97
145 146 4.796369 GCCTATAGCGACTTCGTAAATCT 58.204 43.478 0.00 0.00 42.22 2.40
146 147 4.852650 GCCTATAGCGACTTCGTAAATCTC 59.147 45.833 0.00 0.00 42.22 2.75
147 148 5.562307 GCCTATAGCGACTTCGTAAATCTCA 60.562 44.000 0.00 0.00 42.22 3.27
148 149 6.436261 CCTATAGCGACTTCGTAAATCTCAA 58.564 40.000 0.00 0.00 42.22 3.02
149 150 6.579292 CCTATAGCGACTTCGTAAATCTCAAG 59.421 42.308 0.00 0.00 42.22 3.02
150 151 4.436242 AGCGACTTCGTAAATCTCAAGA 57.564 40.909 0.00 0.00 42.22 3.02
151 152 5.000012 AGCGACTTCGTAAATCTCAAGAT 58.000 39.130 0.00 0.00 42.22 2.40
152 153 4.800993 AGCGACTTCGTAAATCTCAAGATG 59.199 41.667 0.00 0.00 42.22 2.90
153 154 4.798907 GCGACTTCGTAAATCTCAAGATGA 59.201 41.667 0.00 0.00 42.22 2.92
154 155 5.460419 GCGACTTCGTAAATCTCAAGATGAT 59.540 40.000 0.00 0.00 42.22 2.45
155 156 6.637254 GCGACTTCGTAAATCTCAAGATGATA 59.363 38.462 0.00 0.00 42.22 2.15
156 157 7.327275 GCGACTTCGTAAATCTCAAGATGATAT 59.673 37.037 0.00 0.00 42.22 1.63
157 158 8.634265 CGACTTCGTAAATCTCAAGATGATATG 58.366 37.037 0.00 0.00 32.83 1.78
158 159 9.684448 GACTTCGTAAATCTCAAGATGATATGA 57.316 33.333 0.00 0.00 34.49 2.15
161 162 8.992835 TCGTAAATCTCAAGATGATATGATGG 57.007 34.615 0.00 0.00 34.49 3.51
162 163 8.588472 TCGTAAATCTCAAGATGATATGATGGT 58.412 33.333 0.00 0.00 34.49 3.55
163 164 9.212641 CGTAAATCTCAAGATGATATGATGGTT 57.787 33.333 0.00 0.00 34.49 3.67
166 167 8.618702 AATCTCAAGATGATATGATGGTTCAC 57.381 34.615 0.00 0.00 32.64 3.18
167 168 7.370905 TCTCAAGATGATATGATGGTTCACT 57.629 36.000 0.00 0.00 33.85 3.41
168 169 7.799081 TCTCAAGATGATATGATGGTTCACTT 58.201 34.615 0.00 0.00 33.85 3.16
169 170 8.270030 TCTCAAGATGATATGATGGTTCACTTT 58.730 33.333 0.00 0.00 33.85 2.66
170 171 8.442632 TCAAGATGATATGATGGTTCACTTTC 57.557 34.615 0.00 0.00 33.85 2.62
171 172 8.270030 TCAAGATGATATGATGGTTCACTTTCT 58.730 33.333 0.00 0.00 33.85 2.52
172 173 8.557864 CAAGATGATATGATGGTTCACTTTCTC 58.442 37.037 0.00 0.00 33.85 2.87
173 174 6.927936 AGATGATATGATGGTTCACTTTCTCG 59.072 38.462 0.00 0.00 33.85 4.04
174 175 5.359756 TGATATGATGGTTCACTTTCTCGG 58.640 41.667 0.00 0.00 33.85 4.63
175 176 3.981071 ATGATGGTTCACTTTCTCGGA 57.019 42.857 0.00 0.00 33.85 4.55
176 177 3.319137 TGATGGTTCACTTTCTCGGAG 57.681 47.619 0.00 0.00 0.00 4.63
177 178 2.028112 TGATGGTTCACTTTCTCGGAGG 60.028 50.000 4.96 0.00 0.00 4.30
178 179 1.420430 TGGTTCACTTTCTCGGAGGT 58.580 50.000 4.96 0.00 0.00 3.85
179 180 1.070134 TGGTTCACTTTCTCGGAGGTG 59.930 52.381 4.96 5.91 0.00 4.00
180 181 1.149148 GTTCACTTTCTCGGAGGTGC 58.851 55.000 4.96 0.00 0.00 5.01
181 182 1.048601 TTCACTTTCTCGGAGGTGCT 58.951 50.000 4.96 0.00 0.00 4.40
182 183 0.603569 TCACTTTCTCGGAGGTGCTC 59.396 55.000 4.96 0.00 0.00 4.26
183 184 0.318441 CACTTTCTCGGAGGTGCTCA 59.682 55.000 4.96 0.00 31.08 4.26
184 185 0.318762 ACTTTCTCGGAGGTGCTCAC 59.681 55.000 4.96 0.00 31.08 3.51
185 186 0.734253 CTTTCTCGGAGGTGCTCACG 60.734 60.000 4.96 0.00 31.08 4.35
186 187 1.176619 TTTCTCGGAGGTGCTCACGA 61.177 55.000 4.96 0.00 34.21 4.35
187 188 1.587043 TTCTCGGAGGTGCTCACGAG 61.587 60.000 15.83 15.83 44.48 4.18
188 189 3.057547 CTCGGAGGTGCTCACGAGG 62.058 68.421 14.78 2.46 42.13 4.63
189 190 3.062466 CGGAGGTGCTCACGAGGA 61.062 66.667 0.00 0.00 31.08 3.71
190 191 2.418910 CGGAGGTGCTCACGAGGAT 61.419 63.158 0.00 0.00 31.08 3.24
191 192 1.101635 CGGAGGTGCTCACGAGGATA 61.102 60.000 0.00 0.00 31.08 2.59
192 193 0.671251 GGAGGTGCTCACGAGGATAG 59.329 60.000 0.00 0.00 31.08 2.08
193 194 0.671251 GAGGTGCTCACGAGGATAGG 59.329 60.000 0.00 0.00 0.00 2.57
194 195 0.259065 AGGTGCTCACGAGGATAGGA 59.741 55.000 0.00 0.00 0.00 2.94
195 196 1.133325 AGGTGCTCACGAGGATAGGAT 60.133 52.381 0.00 0.00 0.00 3.24
196 197 2.108425 AGGTGCTCACGAGGATAGGATA 59.892 50.000 0.00 0.00 0.00 2.59
197 198 3.093057 GGTGCTCACGAGGATAGGATAT 58.907 50.000 0.00 0.00 0.00 1.63
198 199 3.119316 GGTGCTCACGAGGATAGGATATG 60.119 52.174 0.00 0.00 0.00 1.78
199 200 3.508012 GTGCTCACGAGGATAGGATATGT 59.492 47.826 0.00 0.00 0.00 2.29
200 201 3.507622 TGCTCACGAGGATAGGATATGTG 59.492 47.826 0.00 0.00 0.00 3.21
201 202 3.508012 GCTCACGAGGATAGGATATGTGT 59.492 47.826 0.00 0.00 0.00 3.72
202 203 4.617067 GCTCACGAGGATAGGATATGTGTG 60.617 50.000 0.00 0.00 0.00 3.82
203 204 4.470602 TCACGAGGATAGGATATGTGTGT 58.529 43.478 0.00 0.00 0.00 3.72
204 205 4.278419 TCACGAGGATAGGATATGTGTGTG 59.722 45.833 0.00 0.00 0.00 3.82
205 206 3.005897 ACGAGGATAGGATATGTGTGTGC 59.994 47.826 0.00 0.00 0.00 4.57
206 207 3.579709 GAGGATAGGATATGTGTGTGCG 58.420 50.000 0.00 0.00 0.00 5.34
207 208 2.965831 AGGATAGGATATGTGTGTGCGT 59.034 45.455 0.00 0.00 0.00 5.24
208 209 3.059884 GGATAGGATATGTGTGTGCGTG 58.940 50.000 0.00 0.00 0.00 5.34
209 210 3.492656 GGATAGGATATGTGTGTGCGTGT 60.493 47.826 0.00 0.00 0.00 4.49
210 211 2.472695 AGGATATGTGTGTGCGTGTT 57.527 45.000 0.00 0.00 0.00 3.32
211 212 2.346803 AGGATATGTGTGTGCGTGTTC 58.653 47.619 0.00 0.00 0.00 3.18
212 213 2.073056 GGATATGTGTGTGCGTGTTCA 58.927 47.619 0.00 0.00 0.00 3.18
213 214 2.677836 GGATATGTGTGTGCGTGTTCAT 59.322 45.455 0.00 0.00 0.00 2.57
214 215 3.868661 GGATATGTGTGTGCGTGTTCATA 59.131 43.478 0.00 0.00 0.00 2.15
215 216 4.025730 GGATATGTGTGTGCGTGTTCATAG 60.026 45.833 0.00 0.00 0.00 2.23
216 217 1.507562 TGTGTGTGCGTGTTCATAGG 58.492 50.000 0.00 0.00 0.00 2.57
217 218 0.796312 GTGTGTGCGTGTTCATAGGG 59.204 55.000 0.00 0.00 0.00 3.53
218 219 0.321210 TGTGTGCGTGTTCATAGGGG 60.321 55.000 0.00 0.00 0.00 4.79
219 220 0.321298 GTGTGCGTGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
220 221 0.321210 TGTGCGTGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
221 222 0.036765 GTGCGTGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
222 223 0.249120 TGCGTGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
223 224 0.249398 GCGTGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
224 225 1.479323 GCGTGTTCATAGGGGTGAGTA 59.521 52.381 0.00 0.00 0.00 2.59
225 226 2.102588 GCGTGTTCATAGGGGTGAGTAT 59.897 50.000 0.00 0.00 0.00 2.12
226 227 3.319972 GCGTGTTCATAGGGGTGAGTATA 59.680 47.826 0.00 0.00 0.00 1.47
227 228 4.021368 GCGTGTTCATAGGGGTGAGTATAT 60.021 45.833 0.00 0.00 0.00 0.86
228 229 5.470368 CGTGTTCATAGGGGTGAGTATATG 58.530 45.833 0.00 0.00 0.00 1.78
229 230 5.238583 GTGTTCATAGGGGTGAGTATATGC 58.761 45.833 0.00 0.00 0.00 3.14
230 231 4.904853 TGTTCATAGGGGTGAGTATATGCA 59.095 41.667 0.00 0.00 0.00 3.96
231 232 5.221641 TGTTCATAGGGGTGAGTATATGCAC 60.222 44.000 0.00 0.00 0.00 4.57
232 233 3.509967 TCATAGGGGTGAGTATATGCACG 59.490 47.826 0.00 0.00 35.91 5.34
233 234 0.393077 AGGGGTGAGTATATGCACGC 59.607 55.000 13.23 13.23 44.33 5.34
234 235 2.914379 GGGTGAGTATATGCACGCC 58.086 57.895 11.45 11.45 40.72 5.68
235 236 0.393077 GGGTGAGTATATGCACGCCT 59.607 55.000 17.51 0.00 40.72 5.52
236 237 1.502231 GGTGAGTATATGCACGCCTG 58.498 55.000 12.38 0.00 35.91 4.85
237 238 1.202533 GGTGAGTATATGCACGCCTGT 60.203 52.381 12.38 0.00 35.91 4.00
238 239 2.035449 GGTGAGTATATGCACGCCTGTA 59.965 50.000 12.38 0.00 35.91 2.74
239 240 3.306088 GGTGAGTATATGCACGCCTGTAT 60.306 47.826 12.38 0.00 35.91 2.29
240 241 3.675225 GTGAGTATATGCACGCCTGTATG 59.325 47.826 0.00 0.00 0.00 2.39
241 242 3.572255 TGAGTATATGCACGCCTGTATGA 59.428 43.478 0.00 0.00 0.00 2.15
242 243 4.169508 GAGTATATGCACGCCTGTATGAG 58.830 47.826 0.00 0.00 0.00 2.90
243 244 1.800805 ATATGCACGCCTGTATGAGC 58.199 50.000 0.00 0.00 0.00 4.26
248 249 3.009140 CGCCTGTATGAGCGCTTG 58.991 61.111 13.26 0.00 46.50 4.01
249 250 2.711924 GCCTGTATGAGCGCTTGC 59.288 61.111 13.26 0.00 39.58 4.01
250 251 3.009140 CCTGTATGAGCGCTTGCG 58.991 61.111 13.26 10.90 45.69 4.85
251 252 1.811266 CCTGTATGAGCGCTTGCGT 60.811 57.895 13.26 3.24 45.69 5.24
252 253 1.361668 CCTGTATGAGCGCTTGCGTT 61.362 55.000 13.26 10.61 45.69 4.84
253 254 0.443869 CTGTATGAGCGCTTGCGTTT 59.556 50.000 13.26 5.45 45.69 3.60
254 255 0.165727 TGTATGAGCGCTTGCGTTTG 59.834 50.000 13.26 0.00 45.69 2.93
255 256 0.165944 GTATGAGCGCTTGCGTTTGT 59.834 50.000 13.26 6.11 45.69 2.83
256 257 1.392168 GTATGAGCGCTTGCGTTTGTA 59.608 47.619 13.26 5.22 45.69 2.41
257 258 0.165944 ATGAGCGCTTGCGTTTGTAC 59.834 50.000 13.26 0.00 45.69 2.90
258 259 0.878523 TGAGCGCTTGCGTTTGTACT 60.879 50.000 13.26 3.73 45.69 2.73
259 260 0.451135 GAGCGCTTGCGTTTGTACTG 60.451 55.000 13.26 0.00 45.69 2.74
260 261 1.157870 AGCGCTTGCGTTTGTACTGT 61.158 50.000 16.38 0.00 45.69 3.55
261 262 0.316689 GCGCTTGCGTTTGTACTGTT 60.317 50.000 16.38 0.00 0.00 3.16
262 263 1.070443 GCGCTTGCGTTTGTACTGTTA 60.070 47.619 16.38 0.00 0.00 2.41
263 264 2.600320 GCGCTTGCGTTTGTACTGTTAA 60.600 45.455 16.38 0.00 0.00 2.01
314 315 2.456119 CGTTCCTCCGCACATGAGC 61.456 63.158 4.89 4.89 0.00 4.26
328 2991 2.506438 GAGCCACTCACGCGTACC 60.506 66.667 13.44 0.00 0.00 3.34
343 3006 1.069378 GTACCTGACTACGTGCACGC 61.069 60.000 37.35 22.00 44.43 5.34
461 3125 1.226717 GGTCGTGGCGTGAGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
476 3140 1.865970 GAGATCGAGACACGTATCGGT 59.134 52.381 13.60 7.03 43.64 4.69
486 3150 2.927477 ACACGTATCGGTATGCAGTTTG 59.073 45.455 0.00 0.00 0.00 2.93
509 3173 1.927174 CGGACTAGAATGGTTGCTTCG 59.073 52.381 0.00 0.00 0.00 3.79
559 3223 2.223377 GTCTACCTGTGCAGAAAAACGG 59.777 50.000 0.02 0.00 0.00 4.44
582 3246 1.051812 AGCCCATCTCATTACCGAGG 58.948 55.000 0.00 0.00 33.59 4.63
583 3247 1.048601 GCCCATCTCATTACCGAGGA 58.951 55.000 0.00 0.00 33.59 3.71
584 3248 1.416401 GCCCATCTCATTACCGAGGAA 59.584 52.381 0.00 0.00 33.59 3.36
588 3252 3.388308 CATCTCATTACCGAGGAAGCAG 58.612 50.000 0.00 0.00 33.59 4.24
590 3254 2.166459 TCTCATTACCGAGGAAGCAGTG 59.834 50.000 0.00 0.00 33.59 3.66
592 3256 0.460284 ATTACCGAGGAAGCAGTGCG 60.460 55.000 10.00 0.00 0.00 5.34
811 3487 0.465460 ACGGAGAAGCAACAAGGCAA 60.465 50.000 0.00 0.00 35.83 4.52
847 3523 2.365635 CGATCCCCCACTCCACCT 60.366 66.667 0.00 0.00 0.00 4.00
855 3531 3.706373 CACTCCACCTCACCCCGG 61.706 72.222 0.00 0.00 0.00 5.73
856 3532 3.923645 ACTCCACCTCACCCCGGA 61.924 66.667 0.73 0.00 0.00 5.14
865 3541 2.443016 CACCCCGGAGAGGAGAGG 60.443 72.222 0.73 0.00 45.00 3.69
871 3547 0.548989 CCGGAGAGGAGAGGAGAGAA 59.451 60.000 0.00 0.00 45.00 2.87
885 3561 4.860022 AGGAGAGAAGAGAAGAGAAGAGG 58.140 47.826 0.00 0.00 0.00 3.69
894 3570 7.508977 AGAAGAGAAGAGAAGAGGAGAAAAGAA 59.491 37.037 0.00 0.00 0.00 2.52
895 3571 7.610580 AGAGAAGAGAAGAGGAGAAAAGAAA 57.389 36.000 0.00 0.00 0.00 2.52
896 3572 8.028652 AGAGAAGAGAAGAGGAGAAAAGAAAA 57.971 34.615 0.00 0.00 0.00 2.29
897 3573 8.150296 AGAGAAGAGAAGAGGAGAAAAGAAAAG 58.850 37.037 0.00 0.00 0.00 2.27
898 3574 8.028652 AGAAGAGAAGAGGAGAAAAGAAAAGA 57.971 34.615 0.00 0.00 0.00 2.52
981 3657 0.966920 TCCGTTTCACACTCTCCTCC 59.033 55.000 0.00 0.00 0.00 4.30
982 3658 0.037232 CCGTTTCACACTCTCCTCCC 60.037 60.000 0.00 0.00 0.00 4.30
983 3659 0.969894 CGTTTCACACTCTCCTCCCT 59.030 55.000 0.00 0.00 0.00 4.20
984 3660 1.067495 CGTTTCACACTCTCCTCCCTC 60.067 57.143 0.00 0.00 0.00 4.30
985 3661 1.971357 GTTTCACACTCTCCTCCCTCA 59.029 52.381 0.00 0.00 0.00 3.86
986 3662 1.633774 TTCACACTCTCCTCCCTCAC 58.366 55.000 0.00 0.00 0.00 3.51
987 3663 0.251832 TCACACTCTCCTCCCTCACC 60.252 60.000 0.00 0.00 0.00 4.02
988 3664 1.079438 ACACTCTCCTCCCTCACCC 59.921 63.158 0.00 0.00 0.00 4.61
989 3665 1.687493 CACTCTCCTCCCTCACCCC 60.687 68.421 0.00 0.00 0.00 4.95
990 3666 1.864559 ACTCTCCTCCCTCACCCCT 60.865 63.158 0.00 0.00 0.00 4.79
991 3667 1.394151 CTCTCCTCCCTCACCCCTT 59.606 63.158 0.00 0.00 0.00 3.95
992 3668 0.689412 CTCTCCTCCCTCACCCCTTC 60.689 65.000 0.00 0.00 0.00 3.46
1066 3742 3.068064 CCACAAATCCGCACCCCC 61.068 66.667 0.00 0.00 0.00 5.40
1067 3743 2.282816 CACAAATCCGCACCCCCA 60.283 61.111 0.00 0.00 0.00 4.96
1068 3744 2.035626 ACAAATCCGCACCCCCAG 59.964 61.111 0.00 0.00 0.00 4.45
1069 3745 2.755469 CAAATCCGCACCCCCAGG 60.755 66.667 0.00 0.00 40.04 4.45
2161 4868 6.071616 TCGTAAAAGGGATTTCATTCCTTTGG 60.072 38.462 9.46 3.84 46.56 3.28
2232 4940 4.386652 CAGGTTACAGCATCAAAAACATGC 59.613 41.667 0.00 0.00 46.05 4.06
2336 5044 8.465999 GCAGTATATGATGTACTTAGAGATGCT 58.534 37.037 0.00 0.00 30.24 3.79
2412 5120 2.550606 TGGCGTTGTCCAATGTTCTTAC 59.449 45.455 1.56 0.00 32.18 2.34
2452 5160 7.123830 GTCCCACAATATAAGATCGTTTTTCG 58.876 38.462 0.00 0.00 41.41 3.46
2618 5346 4.263462 TGACTGGATGGTTTAGCATGTCTT 60.263 41.667 0.00 0.00 0.00 3.01
2619 5347 4.012374 ACTGGATGGTTTAGCATGTCTTG 58.988 43.478 0.00 0.00 0.00 3.02
2674 5402 9.343539 GCTATACAATTTGGAGGTAGAATTCTT 57.656 33.333 14.36 0.00 0.00 2.52
2730 5503 2.164219 ACAAGCTTGTGGTGTTGAGTTG 59.836 45.455 30.66 0.56 40.49 3.16
2898 5671 1.478654 CCAACTGTTAGGCACCCTGTT 60.479 52.381 0.00 0.00 34.61 3.16
2945 5718 5.237127 CAGAGTGATGTGTTCTTGCAAAGTA 59.763 40.000 0.00 0.00 46.34 2.24
2954 5727 3.878086 TCTTGCAAAGTACAGCTTTCG 57.122 42.857 0.00 0.00 44.95 3.46
2976 5749 5.685511 TCGTAATTTGAGTTGCTCTTTTTGC 59.314 36.000 0.00 0.00 0.00 3.68
3017 5790 3.795623 ATGCATTCTGGATGTTTGCTC 57.204 42.857 0.00 0.00 38.07 4.26
3168 5968 3.851976 ACTACCTAGAACAGCGTTCTG 57.148 47.619 24.56 15.70 45.71 3.02
3177 5977 4.299978 AGAACAGCGTTCTGAAGAGTAAC 58.700 43.478 18.70 0.00 42.95 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.759346 AACTGGGGATATCGCTGTCC 59.241 55.000 18.21 3.30 39.00 4.02
2 3 2.622064 AAACTGGGGATATCGCTGTC 57.378 50.000 18.21 3.98 39.00 3.51
3 4 3.646162 TGATAAACTGGGGATATCGCTGT 59.354 43.478 18.21 14.22 41.00 4.40
5 6 3.261897 CCTGATAAACTGGGGATATCGCT 59.738 47.826 18.21 2.15 34.55 4.93
6 7 3.600388 CCTGATAAACTGGGGATATCGC 58.400 50.000 11.21 11.21 34.55 4.58
15 16 4.010349 GGACTTGAACCCTGATAAACTGG 58.990 47.826 0.00 0.00 37.35 4.00
16 17 4.911390 AGGACTTGAACCCTGATAAACTG 58.089 43.478 0.00 0.00 0.00 3.16
25 26 1.062488 AGCACCAGGACTTGAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
26 27 0.606673 GAGCACCAGGACTTGAACCC 60.607 60.000 0.00 0.00 0.00 4.11
27 28 0.951040 CGAGCACCAGGACTTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
28 29 1.569479 GCGAGCACCAGGACTTGAAC 61.569 60.000 0.00 0.00 0.00 3.18
29 30 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
30 31 1.830587 ATGCGAGCACCAGGACTTGA 61.831 55.000 0.00 0.00 0.00 3.02
31 32 0.957395 AATGCGAGCACCAGGACTTG 60.957 55.000 0.00 0.00 0.00 3.16
32 33 0.613260 TAATGCGAGCACCAGGACTT 59.387 50.000 0.00 0.00 0.00 3.01
33 34 0.833287 ATAATGCGAGCACCAGGACT 59.167 50.000 0.00 0.00 0.00 3.85
34 35 1.599542 GAATAATGCGAGCACCAGGAC 59.400 52.381 0.00 0.00 0.00 3.85
35 36 1.209261 TGAATAATGCGAGCACCAGGA 59.791 47.619 0.00 0.00 0.00 3.86
36 37 1.667236 TGAATAATGCGAGCACCAGG 58.333 50.000 0.00 0.00 0.00 4.45
37 38 2.031420 CCATGAATAATGCGAGCACCAG 60.031 50.000 0.00 0.00 34.67 4.00
38 39 1.948834 CCATGAATAATGCGAGCACCA 59.051 47.619 0.00 0.00 34.67 4.17
39 40 2.221169 TCCATGAATAATGCGAGCACC 58.779 47.619 0.00 0.00 34.67 5.01
40 41 4.494350 AATCCATGAATAATGCGAGCAC 57.506 40.909 0.00 0.00 34.67 4.40
41 42 6.822667 ATAAATCCATGAATAATGCGAGCA 57.177 33.333 0.00 0.00 34.67 4.26
42 43 7.809331 TGAAATAAATCCATGAATAATGCGAGC 59.191 33.333 0.00 0.00 34.67 5.03
43 44 9.338291 CTGAAATAAATCCATGAATAATGCGAG 57.662 33.333 0.00 0.00 34.67 5.03
44 45 8.298854 CCTGAAATAAATCCATGAATAATGCGA 58.701 33.333 0.00 0.00 34.67 5.10
45 46 8.298854 TCCTGAAATAAATCCATGAATAATGCG 58.701 33.333 0.00 0.00 34.67 4.73
51 52 8.362639 CCGAAATCCTGAAATAAATCCATGAAT 58.637 33.333 0.00 0.00 0.00 2.57
52 53 7.684187 GCCGAAATCCTGAAATAAATCCATGAA 60.684 37.037 0.00 0.00 0.00 2.57
53 54 6.239008 GCCGAAATCCTGAAATAAATCCATGA 60.239 38.462 0.00 0.00 0.00 3.07
54 55 5.922544 GCCGAAATCCTGAAATAAATCCATG 59.077 40.000 0.00 0.00 0.00 3.66
55 56 5.278463 CGCCGAAATCCTGAAATAAATCCAT 60.278 40.000 0.00 0.00 0.00 3.41
56 57 4.036262 CGCCGAAATCCTGAAATAAATCCA 59.964 41.667 0.00 0.00 0.00 3.41
57 58 4.274950 TCGCCGAAATCCTGAAATAAATCC 59.725 41.667 0.00 0.00 0.00 3.01
58 59 5.418310 TCGCCGAAATCCTGAAATAAATC 57.582 39.130 0.00 0.00 0.00 2.17
59 60 5.762045 CATCGCCGAAATCCTGAAATAAAT 58.238 37.500 0.00 0.00 0.00 1.40
60 61 4.497340 GCATCGCCGAAATCCTGAAATAAA 60.497 41.667 0.00 0.00 0.00 1.40
61 62 3.003275 GCATCGCCGAAATCCTGAAATAA 59.997 43.478 0.00 0.00 0.00 1.40
62 63 2.548057 GCATCGCCGAAATCCTGAAATA 59.452 45.455 0.00 0.00 0.00 1.40
63 64 1.334869 GCATCGCCGAAATCCTGAAAT 59.665 47.619 0.00 0.00 0.00 2.17
64 65 0.732571 GCATCGCCGAAATCCTGAAA 59.267 50.000 0.00 0.00 0.00 2.69
65 66 1.428370 CGCATCGCCGAAATCCTGAA 61.428 55.000 0.00 0.00 0.00 3.02
66 67 1.882625 CGCATCGCCGAAATCCTGA 60.883 57.895 0.00 0.00 0.00 3.86
67 68 2.628106 CGCATCGCCGAAATCCTG 59.372 61.111 0.00 0.00 0.00 3.86
78 79 0.652592 CTCCCACTAAAAGCGCATCG 59.347 55.000 11.47 0.00 0.00 3.84
79 80 1.017387 CCTCCCACTAAAAGCGCATC 58.983 55.000 11.47 0.00 0.00 3.91
80 81 0.618458 TCCTCCCACTAAAAGCGCAT 59.382 50.000 11.47 0.00 0.00 4.73
81 82 0.036388 CTCCTCCCACTAAAAGCGCA 60.036 55.000 11.47 0.00 0.00 6.09
82 83 0.249398 TCTCCTCCCACTAAAAGCGC 59.751 55.000 0.00 0.00 0.00 5.92
83 84 1.736032 CGTCTCCTCCCACTAAAAGCG 60.736 57.143 0.00 0.00 0.00 4.68
84 85 1.275573 ACGTCTCCTCCCACTAAAAGC 59.724 52.381 0.00 0.00 0.00 3.51
85 86 3.586892 GAACGTCTCCTCCCACTAAAAG 58.413 50.000 0.00 0.00 0.00 2.27
86 87 2.301009 GGAACGTCTCCTCCCACTAAAA 59.699 50.000 8.87 0.00 41.61 1.52
87 88 1.897802 GGAACGTCTCCTCCCACTAAA 59.102 52.381 8.87 0.00 41.61 1.85
88 89 1.553706 GGAACGTCTCCTCCCACTAA 58.446 55.000 8.87 0.00 41.61 2.24
89 90 3.277962 GGAACGTCTCCTCCCACTA 57.722 57.895 8.87 0.00 41.61 2.74
90 91 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
94 95 0.964358 TCGAAGGGAACGTCTCCTCC 60.964 60.000 9.66 2.92 44.68 4.30
95 96 0.170784 GTCGAAGGGAACGTCTCCTC 59.829 60.000 9.66 3.89 44.68 3.71
96 97 1.584380 CGTCGAAGGGAACGTCTCCT 61.584 60.000 13.94 9.58 44.68 3.69
97 98 1.154073 CGTCGAAGGGAACGTCTCC 60.154 63.158 7.90 7.90 44.54 3.71
98 99 0.454117 GTCGTCGAAGGGAACGTCTC 60.454 60.000 0.00 0.00 36.62 3.36
99 100 1.578423 GTCGTCGAAGGGAACGTCT 59.422 57.895 0.00 0.00 36.62 4.18
100 101 1.795177 CGTCGTCGAAGGGAACGTC 60.795 63.158 0.00 0.00 39.71 4.34
101 102 2.180131 CTCGTCGTCGAAGGGAACGT 62.180 60.000 1.35 0.00 45.61 3.99
102 103 1.511464 CTCGTCGTCGAAGGGAACG 60.511 63.158 1.35 5.02 45.61 3.95
103 104 0.454117 GTCTCGTCGTCGAAGGGAAC 60.454 60.000 12.46 3.97 45.61 3.62
104 105 1.871772 GTCTCGTCGTCGAAGGGAA 59.128 57.895 12.46 0.00 45.61 3.97
105 106 2.385875 CGTCTCGTCGTCGAAGGGA 61.386 63.158 6.65 6.65 45.61 4.20
106 107 2.097918 CGTCTCGTCGTCGAAGGG 59.902 66.667 6.19 4.94 45.61 3.95
107 108 2.573689 GCGTCTCGTCGTCGAAGG 60.574 66.667 6.19 4.80 45.61 3.46
108 109 1.690283 TAGGCGTCTCGTCGTCGAAG 61.690 60.000 6.19 0.00 45.61 3.79
109 110 1.086067 ATAGGCGTCTCGTCGTCGAA 61.086 55.000 6.19 0.00 45.61 3.71
110 111 0.249031 TATAGGCGTCTCGTCGTCGA 60.249 55.000 4.42 4.42 44.12 4.20
111 112 0.161235 CTATAGGCGTCTCGTCGTCG 59.839 60.000 0.00 0.00 40.52 5.12
112 113 0.110733 GCTATAGGCGTCTCGTCGTC 60.111 60.000 0.00 0.00 36.23 4.20
113 114 1.940334 GCTATAGGCGTCTCGTCGT 59.060 57.895 0.00 0.00 36.23 4.34
114 115 4.822503 GCTATAGGCGTCTCGTCG 57.177 61.111 0.00 0.00 36.23 5.12
123 124 4.796369 AGATTTACGAAGTCGCTATAGGC 58.204 43.478 1.04 0.00 43.93 3.93
124 125 5.998553 TGAGATTTACGAAGTCGCTATAGG 58.001 41.667 1.04 0.00 43.93 2.57
125 126 7.353497 TCTTGAGATTTACGAAGTCGCTATAG 58.647 38.462 0.00 0.00 43.93 1.31
126 127 7.255491 TCTTGAGATTTACGAAGTCGCTATA 57.745 36.000 0.00 0.00 43.93 1.31
127 128 6.132791 TCTTGAGATTTACGAAGTCGCTAT 57.867 37.500 0.00 0.00 43.93 2.97
128 129 5.556355 TCTTGAGATTTACGAAGTCGCTA 57.444 39.130 0.00 0.00 43.93 4.26
129 130 4.436242 TCTTGAGATTTACGAAGTCGCT 57.564 40.909 0.00 0.00 43.93 4.93
130 131 4.798907 TCATCTTGAGATTTACGAAGTCGC 59.201 41.667 0.00 0.00 35.39 5.19
131 132 8.634265 CATATCATCTTGAGATTTACGAAGTCG 58.366 37.037 0.00 0.00 35.39 4.18
132 133 9.684448 TCATATCATCTTGAGATTTACGAAGTC 57.316 33.333 0.00 0.00 35.39 3.01
135 136 9.428097 CCATCATATCATCTTGAGATTTACGAA 57.572 33.333 0.00 0.00 31.21 3.85
136 137 8.588472 ACCATCATATCATCTTGAGATTTACGA 58.412 33.333 0.00 0.00 31.21 3.43
137 138 8.768957 ACCATCATATCATCTTGAGATTTACG 57.231 34.615 0.00 0.00 31.21 3.18
140 141 9.064706 GTGAACCATCATATCATCTTGAGATTT 57.935 33.333 0.00 0.00 38.01 2.17
141 142 8.438373 AGTGAACCATCATATCATCTTGAGATT 58.562 33.333 0.00 0.00 38.01 2.40
142 143 7.975608 AGTGAACCATCATATCATCTTGAGAT 58.024 34.615 0.00 0.00 38.01 2.75
143 144 7.370905 AGTGAACCATCATATCATCTTGAGA 57.629 36.000 0.00 0.00 38.01 3.27
144 145 8.447924 AAAGTGAACCATCATATCATCTTGAG 57.552 34.615 0.00 0.00 38.01 3.02
145 146 8.270030 AGAAAGTGAACCATCATATCATCTTGA 58.730 33.333 0.00 0.00 38.01 3.02
146 147 8.447924 AGAAAGTGAACCATCATATCATCTTG 57.552 34.615 0.00 0.00 38.01 3.02
147 148 7.440556 CGAGAAAGTGAACCATCATATCATCTT 59.559 37.037 0.00 0.00 38.01 2.40
148 149 6.927936 CGAGAAAGTGAACCATCATATCATCT 59.072 38.462 0.00 0.00 38.01 2.90
149 150 6.146837 CCGAGAAAGTGAACCATCATATCATC 59.853 42.308 0.00 0.00 38.01 2.92
150 151 5.994054 CCGAGAAAGTGAACCATCATATCAT 59.006 40.000 0.00 0.00 38.01 2.45
151 152 5.128663 TCCGAGAAAGTGAACCATCATATCA 59.871 40.000 0.00 0.00 38.01 2.15
152 153 5.601662 TCCGAGAAAGTGAACCATCATATC 58.398 41.667 0.00 0.00 38.01 1.63
153 154 5.453903 CCTCCGAGAAAGTGAACCATCATAT 60.454 44.000 0.00 0.00 38.01 1.78
154 155 4.141937 CCTCCGAGAAAGTGAACCATCATA 60.142 45.833 0.00 0.00 38.01 2.15
155 156 3.369892 CCTCCGAGAAAGTGAACCATCAT 60.370 47.826 0.00 0.00 38.01 2.45
156 157 2.028112 CCTCCGAGAAAGTGAACCATCA 60.028 50.000 0.00 0.00 0.00 3.07
157 158 2.028020 ACCTCCGAGAAAGTGAACCATC 60.028 50.000 0.00 0.00 0.00 3.51
158 159 1.978580 ACCTCCGAGAAAGTGAACCAT 59.021 47.619 0.00 0.00 0.00 3.55
159 160 1.070134 CACCTCCGAGAAAGTGAACCA 59.930 52.381 0.00 0.00 31.79 3.67
160 161 1.797025 CACCTCCGAGAAAGTGAACC 58.203 55.000 0.00 0.00 31.79 3.62
161 162 1.149148 GCACCTCCGAGAAAGTGAAC 58.851 55.000 7.29 0.00 31.79 3.18
162 163 1.000955 GAGCACCTCCGAGAAAGTGAA 59.999 52.381 7.29 0.00 31.79 3.18
163 164 0.603569 GAGCACCTCCGAGAAAGTGA 59.396 55.000 7.29 0.00 31.79 3.41
164 165 0.318441 TGAGCACCTCCGAGAAAGTG 59.682 55.000 0.00 0.00 0.00 3.16
165 166 0.318762 GTGAGCACCTCCGAGAAAGT 59.681 55.000 0.00 0.00 0.00 2.66
166 167 0.734253 CGTGAGCACCTCCGAGAAAG 60.734 60.000 0.00 0.00 0.00 2.62
167 168 1.176619 TCGTGAGCACCTCCGAGAAA 61.177 55.000 0.00 0.00 32.60 2.52
168 169 1.587043 CTCGTGAGCACCTCCGAGAA 61.587 60.000 19.24 0.00 45.16 2.87
169 170 2.033602 TCGTGAGCACCTCCGAGA 59.966 61.111 0.00 0.00 32.60 4.04
170 171 2.487428 CTCGTGAGCACCTCCGAG 59.513 66.667 14.17 14.17 41.14 4.63
171 172 2.838748 ATCCTCGTGAGCACCTCCGA 62.839 60.000 0.00 5.95 34.21 4.55
172 173 1.101635 TATCCTCGTGAGCACCTCCG 61.102 60.000 0.00 0.00 0.00 4.63
173 174 0.671251 CTATCCTCGTGAGCACCTCC 59.329 60.000 0.00 0.00 0.00 4.30
174 175 0.671251 CCTATCCTCGTGAGCACCTC 59.329 60.000 0.00 0.00 0.00 3.85
175 176 0.259065 TCCTATCCTCGTGAGCACCT 59.741 55.000 0.00 0.00 0.00 4.00
176 177 1.333177 ATCCTATCCTCGTGAGCACC 58.667 55.000 0.00 0.00 0.00 5.01
177 178 3.508012 ACATATCCTATCCTCGTGAGCAC 59.492 47.826 0.00 0.00 0.00 4.40
178 179 3.507622 CACATATCCTATCCTCGTGAGCA 59.492 47.826 0.00 0.00 0.00 4.26
179 180 3.508012 ACACATATCCTATCCTCGTGAGC 59.492 47.826 0.00 0.00 0.00 4.26
180 181 4.520874 ACACACATATCCTATCCTCGTGAG 59.479 45.833 0.00 0.00 0.00 3.51
181 182 4.278419 CACACACATATCCTATCCTCGTGA 59.722 45.833 0.00 0.00 0.00 4.35
182 183 4.550422 CACACACATATCCTATCCTCGTG 58.450 47.826 0.00 0.00 0.00 4.35
183 184 3.005897 GCACACACATATCCTATCCTCGT 59.994 47.826 0.00 0.00 0.00 4.18
184 185 3.579709 GCACACACATATCCTATCCTCG 58.420 50.000 0.00 0.00 0.00 4.63
185 186 3.005897 ACGCACACACATATCCTATCCTC 59.994 47.826 0.00 0.00 0.00 3.71
186 187 2.965831 ACGCACACACATATCCTATCCT 59.034 45.455 0.00 0.00 0.00 3.24
187 188 3.059884 CACGCACACACATATCCTATCC 58.940 50.000 0.00 0.00 0.00 2.59
188 189 3.717707 ACACGCACACACATATCCTATC 58.282 45.455 0.00 0.00 0.00 2.08
189 190 3.819564 ACACGCACACACATATCCTAT 57.180 42.857 0.00 0.00 0.00 2.57
190 191 3.056465 TGAACACGCACACACATATCCTA 60.056 43.478 0.00 0.00 0.00 2.94
191 192 2.289382 TGAACACGCACACACATATCCT 60.289 45.455 0.00 0.00 0.00 3.24
192 193 2.073056 TGAACACGCACACACATATCC 58.927 47.619 0.00 0.00 0.00 2.59
193 194 4.025730 CCTATGAACACGCACACACATATC 60.026 45.833 0.00 0.00 0.00 1.63
194 195 3.871006 CCTATGAACACGCACACACATAT 59.129 43.478 0.00 0.00 0.00 1.78
195 196 3.258228 CCTATGAACACGCACACACATA 58.742 45.455 0.00 0.00 0.00 2.29
196 197 2.076100 CCTATGAACACGCACACACAT 58.924 47.619 0.00 0.00 0.00 3.21
197 198 1.507562 CCTATGAACACGCACACACA 58.492 50.000 0.00 0.00 0.00 3.72
198 199 0.796312 CCCTATGAACACGCACACAC 59.204 55.000 0.00 0.00 0.00 3.82
199 200 0.321210 CCCCTATGAACACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
200 201 0.321298 ACCCCTATGAACACGCACAC 60.321 55.000 0.00 0.00 0.00 3.82
201 202 0.321210 CACCCCTATGAACACGCACA 60.321 55.000 0.00 0.00 0.00 4.57
202 203 0.036765 TCACCCCTATGAACACGCAC 60.037 55.000 0.00 0.00 0.00 5.34
203 204 0.249120 CTCACCCCTATGAACACGCA 59.751 55.000 0.00 0.00 0.00 5.24
204 205 0.249398 ACTCACCCCTATGAACACGC 59.751 55.000 0.00 0.00 0.00 5.34
205 206 5.470368 CATATACTCACCCCTATGAACACG 58.530 45.833 0.00 0.00 0.00 4.49
206 207 5.221641 TGCATATACTCACCCCTATGAACAC 60.222 44.000 0.00 0.00 0.00 3.32
207 208 4.904853 TGCATATACTCACCCCTATGAACA 59.095 41.667 0.00 0.00 0.00 3.18
208 209 5.238583 GTGCATATACTCACCCCTATGAAC 58.761 45.833 0.00 0.00 0.00 3.18
209 210 4.021456 CGTGCATATACTCACCCCTATGAA 60.021 45.833 0.00 0.00 0.00 2.57
210 211 3.509967 CGTGCATATACTCACCCCTATGA 59.490 47.826 0.00 0.00 0.00 2.15
211 212 3.849911 CGTGCATATACTCACCCCTATG 58.150 50.000 0.00 0.00 0.00 2.23
212 213 2.233922 GCGTGCATATACTCACCCCTAT 59.766 50.000 0.00 0.00 0.00 2.57
213 214 1.616865 GCGTGCATATACTCACCCCTA 59.383 52.381 0.00 0.00 0.00 3.53
214 215 0.393077 GCGTGCATATACTCACCCCT 59.607 55.000 0.00 0.00 0.00 4.79
215 216 0.602905 GGCGTGCATATACTCACCCC 60.603 60.000 0.00 0.00 0.00 4.95
216 217 0.393077 AGGCGTGCATATACTCACCC 59.607 55.000 0.00 4.19 0.00 4.61
217 218 1.202533 ACAGGCGTGCATATACTCACC 60.203 52.381 6.26 0.00 0.00 4.02
218 219 2.225068 ACAGGCGTGCATATACTCAC 57.775 50.000 6.26 0.00 0.00 3.51
219 220 3.572255 TCATACAGGCGTGCATATACTCA 59.428 43.478 6.26 0.00 0.00 3.41
220 221 4.169508 CTCATACAGGCGTGCATATACTC 58.830 47.826 6.26 0.00 0.00 2.59
221 222 3.615110 GCTCATACAGGCGTGCATATACT 60.615 47.826 6.26 0.00 0.00 2.12
222 223 2.668457 GCTCATACAGGCGTGCATATAC 59.332 50.000 6.26 0.00 0.00 1.47
223 224 2.671070 CGCTCATACAGGCGTGCATATA 60.671 50.000 6.26 0.00 45.34 0.86
224 225 1.800805 GCTCATACAGGCGTGCATAT 58.199 50.000 6.26 0.00 0.00 1.78
225 226 0.597377 CGCTCATACAGGCGTGCATA 60.597 55.000 6.26 0.00 45.34 3.14
226 227 1.884464 CGCTCATACAGGCGTGCAT 60.884 57.895 6.26 0.00 45.34 3.96
227 228 2.509111 CGCTCATACAGGCGTGCA 60.509 61.111 6.26 0.00 45.34 4.57
232 233 2.711924 GCAAGCGCTCATACAGGC 59.288 61.111 12.06 2.31 34.30 4.85
233 234 1.361668 AACGCAAGCGCTCATACAGG 61.362 55.000 12.06 0.00 44.19 4.00
234 235 0.443869 AAACGCAAGCGCTCATACAG 59.556 50.000 12.06 1.77 44.19 2.74
235 236 0.165727 CAAACGCAAGCGCTCATACA 59.834 50.000 12.06 0.00 44.19 2.29
236 237 0.165944 ACAAACGCAAGCGCTCATAC 59.834 50.000 12.06 0.00 44.19 2.39
237 238 1.392168 GTACAAACGCAAGCGCTCATA 59.608 47.619 12.06 0.00 44.19 2.15
238 239 0.165944 GTACAAACGCAAGCGCTCAT 59.834 50.000 12.06 0.00 44.19 2.90
239 240 0.878523 AGTACAAACGCAAGCGCTCA 60.879 50.000 12.06 0.00 44.19 4.26
240 241 0.451135 CAGTACAAACGCAAGCGCTC 60.451 55.000 12.06 0.00 44.19 5.03
241 242 1.157870 ACAGTACAAACGCAAGCGCT 61.158 50.000 15.09 2.64 44.19 5.92
242 243 0.316689 AACAGTACAAACGCAAGCGC 60.317 50.000 15.09 0.00 44.19 5.92
243 244 2.934107 TAACAGTACAAACGCAAGCG 57.066 45.000 13.50 13.50 46.03 4.68
244 245 5.935448 TTTTTAACAGTACAAACGCAAGC 57.065 34.783 0.00 0.00 45.62 4.01
269 270 1.816835 TGGCAGTTGTCTAGGAGTACG 59.183 52.381 0.00 0.00 0.00 3.67
328 2991 3.172575 CGGCGTGCACGTAGTCAG 61.173 66.667 36.80 18.96 41.61 3.51
431 3094 0.524816 CCACGACCATTACCTCGACG 60.525 60.000 0.00 0.00 33.96 5.12
434 3097 1.876714 CGCCACGACCATTACCTCG 60.877 63.158 0.00 0.00 35.96 4.63
435 3098 1.082117 CACGCCACGACCATTACCTC 61.082 60.000 0.00 0.00 0.00 3.85
461 3125 1.003223 TGCATACCGATACGTGTCTCG 60.003 52.381 10.73 9.90 46.00 4.04
476 3140 4.794278 TCTAGTCCGTTCAAACTGCATA 57.206 40.909 0.00 0.00 0.00 3.14
486 3150 2.973945 AGCAACCATTCTAGTCCGTTC 58.026 47.619 0.00 0.00 0.00 3.95
509 3173 2.047560 AAGGGCGTAACGAGTGGC 60.048 61.111 0.00 0.00 0.00 5.01
559 3223 1.230324 GGTAATGAGATGGGCTTCGC 58.770 55.000 0.00 0.00 0.00 4.70
582 3246 2.250485 CTGTGTGCGCACTGCTTC 59.750 61.111 37.59 22.55 45.44 3.86
588 3252 1.075425 TTTTGTTGCTGTGTGCGCAC 61.075 50.000 33.11 33.11 46.63 5.34
590 3254 1.075425 TGTTTTGTTGCTGTGTGCGC 61.075 50.000 0.00 0.00 46.63 6.09
592 3256 3.802722 TTTTGTTTTGTTGCTGTGTGC 57.197 38.095 0.00 0.00 43.25 4.57
698 3366 8.303876 GCTTGTTTTCCAGGAAATAAGTTGATA 58.696 33.333 25.64 7.03 33.13 2.15
699 3367 7.154656 GCTTGTTTTCCAGGAAATAAGTTGAT 58.845 34.615 25.64 0.00 33.13 2.57
701 3369 5.402270 CGCTTGTTTTCCAGGAAATAAGTTG 59.598 40.000 25.64 19.35 33.13 3.16
702 3370 5.300792 TCGCTTGTTTTCCAGGAAATAAGTT 59.699 36.000 25.64 0.00 33.13 2.66
704 3372 5.371115 TCGCTTGTTTTCCAGGAAATAAG 57.629 39.130 23.24 23.24 33.42 1.73
705 3373 5.776173 TTCGCTTGTTTTCCAGGAAATAA 57.224 34.783 15.75 12.45 31.34 1.40
707 3375 4.620982 CTTTCGCTTGTTTTCCAGGAAAT 58.379 39.130 15.75 0.00 31.34 2.17
708 3376 3.736740 GCTTTCGCTTGTTTTCCAGGAAA 60.737 43.478 10.90 10.90 0.00 3.13
711 3379 1.602920 GGCTTTCGCTTGTTTTCCAGG 60.603 52.381 0.00 0.00 36.09 4.45
811 3487 1.492993 GGTGTTCCTCTCCCTGCCTT 61.493 60.000 0.00 0.00 0.00 4.35
847 3523 2.684104 CTCTCCTCTCCGGGGTGA 59.316 66.667 4.57 2.38 33.68 4.02
855 3531 4.164221 TCTTCTCTTCTCTCCTCTCCTCTC 59.836 50.000 0.00 0.00 0.00 3.20
856 3532 4.111577 TCTTCTCTTCTCTCCTCTCCTCT 58.888 47.826 0.00 0.00 0.00 3.69
860 3536 5.745227 TCTTCTCTTCTCTTCTCTCCTCTC 58.255 45.833 0.00 0.00 0.00 3.20
861 3537 5.339530 CCTCTTCTCTTCTCTTCTCTCCTCT 60.340 48.000 0.00 0.00 0.00 3.69
865 3541 5.745227 TCTCCTCTTCTCTTCTCTTCTCTC 58.255 45.833 0.00 0.00 0.00 3.20
871 3547 7.610580 TTTCTTTTCTCCTCTTCTCTTCTCT 57.389 36.000 0.00 0.00 0.00 3.10
885 3561 5.396750 CGGATCGGATCTTTTCTTTTCTC 57.603 43.478 16.96 0.00 0.00 2.87
982 3658 2.933834 AACGGGGGAAGGGGTGAG 60.934 66.667 0.00 0.00 0.00 3.51
983 3659 2.931649 GAACGGGGGAAGGGGTGA 60.932 66.667 0.00 0.00 0.00 4.02
984 3660 4.043100 GGAACGGGGGAAGGGGTG 62.043 72.222 0.00 0.00 0.00 4.61
988 3664 2.939353 AAGGGGAACGGGGGAAGG 60.939 66.667 0.00 0.00 0.00 3.46
989 3665 2.675371 GAAGGGGAACGGGGGAAG 59.325 66.667 0.00 0.00 0.00 3.46
990 3666 2.937136 GGAAGGGGAACGGGGGAA 60.937 66.667 0.00 0.00 0.00 3.97
991 3667 3.510432 AAGGAAGGGGAACGGGGGA 62.510 63.158 0.00 0.00 0.00 4.81
992 3668 2.939353 AAGGAAGGGGAACGGGGG 60.939 66.667 0.00 0.00 0.00 5.40
1066 3742 2.746671 CTGCTGCTGCTGGTCCTG 60.747 66.667 17.00 0.00 40.48 3.86
1067 3743 4.719106 GCTGCTGCTGCTGGTCCT 62.719 66.667 22.10 0.00 40.48 3.85
1073 3761 2.750637 GTCATGGCTGCTGCTGCT 60.751 61.111 26.79 9.19 40.48 4.24
1970 4670 2.665089 CGTGGCCACCCCTCATACA 61.665 63.158 29.95 0.00 0.00 2.29
2004 4709 1.330655 ACATAGCCACCGGACTCAGG 61.331 60.000 9.46 2.57 0.00 3.86
2244 4952 6.592607 CACAAAGCAAAGAAAATCCTATGCAT 59.407 34.615 3.79 3.79 36.30 3.96
2245 4953 5.927689 CACAAAGCAAAGAAAATCCTATGCA 59.072 36.000 0.00 0.00 36.30 3.96
2246 4954 5.928264 ACACAAAGCAAAGAAAATCCTATGC 59.072 36.000 0.00 0.00 0.00 3.14
2251 4959 5.580297 TGTTGACACAAAGCAAAGAAAATCC 59.420 36.000 0.00 0.00 0.00 3.01
2336 5044 5.299279 GGACAGGAAAAGAATGACAACTGAA 59.701 40.000 0.00 0.00 0.00 3.02
2412 5120 0.752376 GGGACGGAGGGAGTAGTGAG 60.752 65.000 0.00 0.00 0.00 3.51
2452 5160 9.214953 CACAATATAAGATCGTTTTTCAAGCTC 57.785 33.333 0.00 0.00 0.00 4.09
2458 5166 7.123830 CGTCCCACAATATAAGATCGTTTTTC 58.876 38.462 0.00 0.00 0.00 2.29
2459 5167 6.037830 CCGTCCCACAATATAAGATCGTTTTT 59.962 38.462 0.00 0.00 0.00 1.94
2461 5169 5.054477 CCGTCCCACAATATAAGATCGTTT 58.946 41.667 0.00 0.00 0.00 3.60
2464 5172 4.486090 CTCCGTCCCACAATATAAGATCG 58.514 47.826 0.00 0.00 0.00 3.69
2618 5346 5.048083 GCTTGACCAAATATTGACACTTCCA 60.048 40.000 0.00 0.00 0.00 3.53
2619 5347 5.048083 TGCTTGACCAAATATTGACACTTCC 60.048 40.000 0.00 0.00 0.00 3.46
2674 5402 8.195436 CGTCTTATATTTGTTTACAGAGGGAGA 58.805 37.037 0.00 0.00 0.00 3.71
2711 5439 1.750778 CCAACTCAACACCACAAGCTT 59.249 47.619 0.00 0.00 0.00 3.74
2730 5503 6.763135 TGAATCACATAGCTTGTATCTGAACC 59.237 38.462 0.00 0.00 36.57 3.62
2771 5544 5.156355 CAACACATTCTGGATGTTTGCTAC 58.844 41.667 0.00 0.00 46.80 3.58
2799 5572 7.815068 GTCTGGTTCATAGGTATATACTGCAAG 59.185 40.741 12.54 0.77 42.29 4.01
2898 5671 5.895636 CCTACAGGCAAAATCACAACATA 57.104 39.130 0.00 0.00 0.00 2.29
2921 5694 4.036027 ACTTTGCAAGAACACATCACTCTG 59.964 41.667 0.00 0.00 0.00 3.35
2945 5718 4.275936 AGCAACTCAAATTACGAAAGCTGT 59.724 37.500 0.00 0.00 0.00 4.40
2954 5727 6.697019 TCAGCAAAAAGAGCAACTCAAATTAC 59.303 34.615 0.00 0.00 32.06 1.89
2963 5736 4.370917 TCCAATTCAGCAAAAAGAGCAAC 58.629 39.130 0.00 0.00 0.00 4.17
2976 5749 8.797350 TGCATATTCCACTATATCCAATTCAG 57.203 34.615 0.00 0.00 0.00 3.02
3036 5809 3.817647 GGTTTGACAAACAGAGCTGAGAT 59.182 43.478 27.59 0.00 43.15 2.75
3075 5848 7.721402 ACTGCCTGTGTTGAACAATAAAAATA 58.279 30.769 0.00 0.00 38.67 1.40
3076 5849 6.581712 ACTGCCTGTGTTGAACAATAAAAAT 58.418 32.000 0.00 0.00 38.67 1.82
3082 5861 3.784338 CAAACTGCCTGTGTTGAACAAT 58.216 40.909 0.00 0.00 38.67 2.71
3083 5862 2.673610 GCAAACTGCCTGTGTTGAACAA 60.674 45.455 0.00 0.00 37.42 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.