Multiple sequence alignment - TraesCS6D01G214300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G214300 chr6D 100.000 6092 0 0 1 6092 304734489 304740580 0.000000e+00 11250
1 TraesCS6D01G214300 chr6D 97.311 409 11 0 5684 6092 200725755 200726163 0.000000e+00 695
2 TraesCS6D01G214300 chr6A 94.744 4585 150 38 988 5539 410584143 410579617 0.000000e+00 7047
3 TraesCS6D01G214300 chr6A 84.422 597 35 26 20 579 410585128 410584553 8.990000e-148 534
4 TraesCS6D01G214300 chr6A 84.262 305 21 12 1 286 410791239 410790943 7.780000e-69 272
5 TraesCS6D01G214300 chr6A 81.013 158 13 12 5537 5679 410579414 410579259 6.460000e-20 110
6 TraesCS6D01G214300 chr6B 94.905 2473 75 21 3073 5539 472612062 472609635 0.000000e+00 3821
7 TraesCS6D01G214300 chr6B 93.493 2551 78 31 589 3075 472614669 472612143 0.000000e+00 3711
8 TraesCS6D01G214300 chr6B 92.333 300 8 4 191 481 472615194 472614901 4.390000e-111 412
9 TraesCS6D01G214300 chr6B 96.689 151 4 1 1 151 472615340 472615191 3.650000e-62 250
10 TraesCS6D01G214300 chr3D 97.800 409 9 0 5684 6092 188375461 188375053 0.000000e+00 706
11 TraesCS6D01G214300 chr3D 96.822 409 11 1 5684 6092 188382619 188382213 0.000000e+00 682
12 TraesCS6D01G214300 chr5D 97.311 409 10 1 5684 6092 368427915 368427508 0.000000e+00 693
13 TraesCS6D01G214300 chr2D 96.829 410 13 0 5683 6092 644681601 644681192 0.000000e+00 686
14 TraesCS6D01G214300 chr2D 96.088 409 16 0 5684 6092 74453750 74453342 0.000000e+00 667
15 TraesCS6D01G214300 chr2D 95.610 410 18 0 5683 6092 644698041 644697632 0.000000e+00 658
16 TraesCS6D01G214300 chr2D 95.599 409 18 0 5684 6092 206954102 206953694 0.000000e+00 656
17 TraesCS6D01G214300 chr2D 86.452 310 42 0 1138 1447 477264759 477264450 2.100000e-89 340
18 TraesCS6D01G214300 chr2D 84.821 112 16 1 3104 3215 477395095 477395205 1.790000e-20 111
19 TraesCS6D01G214300 chr1D 94.878 410 21 0 5683 6092 385301452 385301861 5.150000e-180 641
20 TraesCS6D01G214300 chr2B 87.419 310 39 0 1138 1447 559193249 559192940 2.090000e-94 357
21 TraesCS6D01G214300 chr2B 84.936 312 47 0 1136 1447 557990213 557990524 3.540000e-82 316
22 TraesCS6D01G214300 chr2B 84.821 112 16 1 3104 3215 559417048 559417158 1.790000e-20 111
23 TraesCS6D01G214300 chr2A 86.774 310 40 1 1138 1447 619628311 619628003 1.630000e-90 344
24 TraesCS6D01G214300 chr2A 85.382 301 40 4 1149 1447 619765233 619765531 5.930000e-80 309
25 TraesCS6D01G214300 chr2A 84.227 317 42 8 1135 1447 619755074 619755386 9.920000e-78 302
26 TraesCS6D01G214300 chr2A 83.974 312 50 0 1136 1447 619206657 619206346 3.570000e-77 300
27 TraesCS6D01G214300 chr2A 87.500 112 13 1 3104 3215 619766162 619766272 1.780000e-25 128


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G214300 chr6D 304734489 304740580 6091 False 11250.000000 11250 100.000000 1 6092 1 chr6D.!!$F2 6091
1 TraesCS6D01G214300 chr6A 410579259 410585128 5869 True 2563.666667 7047 86.726333 20 5679 3 chr6A.!!$R2 5659
2 TraesCS6D01G214300 chr6B 472609635 472615340 5705 True 2048.500000 3821 94.355000 1 5539 4 chr6B.!!$R1 5538
3 TraesCS6D01G214300 chr2A 619765233 619766272 1039 False 218.500000 309 86.441000 1149 3215 2 chr2A.!!$F2 2066


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
257 267 0.466124 AGATAACGAAGGAGGCTGGC 59.534 55.000 0.00 0.0 0.00 4.85 F
1456 1644 0.458025 CTTCAGCGGTCGGTAACCTC 60.458 60.000 0.00 0.0 46.87 3.85 F
1736 2126 0.105246 ATCTGGGCTCAGGAGGTAGG 60.105 60.000 15.13 0.0 41.23 3.18 F
1945 2343 0.949105 GGTGTGTTAGGTGGACTGCG 60.949 60.000 0.00 0.0 0.00 5.18 F
2455 2860 2.116366 ACGCGTTGCTGATTTGAAAAC 58.884 42.857 5.58 0.0 0.00 2.43 F
2954 3377 3.339141 GAACATCAAGGAACCTCACCTC 58.661 50.000 0.00 0.0 36.67 3.85 F
3627 4171 4.460263 AGTGTCTGAACATTTGCTTACCA 58.540 39.130 0.00 0.0 37.81 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1694 2084 1.342819 GCATCGTGCTCCTCCTTATCT 59.657 52.381 3.20 0.0 40.96 1.98 R
2753 3176 2.040278 AGTTTCACAAGGCAGGCAGATA 59.960 45.455 0.00 0.0 0.00 1.98 R
3627 4171 1.127343 GGAGACTGCCTTGGAGCTAT 58.873 55.000 0.00 0.0 0.00 2.97 R
3631 4175 3.320541 CAGTATAGGAGACTGCCTTGGAG 59.679 52.174 0.00 0.0 43.88 3.86 R
4035 4580 0.739462 TGCGGATAAGCACCTTGACG 60.739 55.000 0.00 0.0 42.92 4.35 R
4248 4793 0.827368 GCGGGAAGATCTGAGGAAGT 59.173 55.000 0.00 0.0 0.00 3.01 R
5320 5877 0.179189 GTGAAATGCGCTGCTACACC 60.179 55.000 9.73 0.0 0.00 4.16 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 58 0.962356 AAGCAATGACGAGCCTTGGG 60.962 55.000 0.00 0.00 0.00 4.12
80 84 2.044946 GGTGGTCCATGTCCAGGC 60.045 66.667 7.05 0.00 35.49 4.85
84 88 2.693871 GGTCCATGTCCAGGCCCAT 61.694 63.158 0.00 0.00 0.00 4.00
134 138 6.038714 ACTCGGAAGATGCAAAAGATAATTCC 59.961 38.462 0.00 0.00 40.84 3.01
136 140 6.603201 TCGGAAGATGCAAAAGATAATTCCTT 59.397 34.615 0.00 0.00 34.20 3.36
154 158 2.286872 CTTGAGATGCGCTCCATTTCT 58.713 47.619 9.73 1.00 43.26 2.52
155 159 2.408271 TGAGATGCGCTCCATTTCTT 57.592 45.000 9.73 0.00 43.26 2.52
156 160 2.715046 TGAGATGCGCTCCATTTCTTT 58.285 42.857 9.73 0.00 43.26 2.52
157 161 3.084039 TGAGATGCGCTCCATTTCTTTT 58.916 40.909 9.73 0.00 43.26 2.27
158 162 3.507233 TGAGATGCGCTCCATTTCTTTTT 59.493 39.130 9.73 0.00 43.26 1.94
159 163 4.101235 GAGATGCGCTCCATTTCTTTTTC 58.899 43.478 9.73 0.00 37.69 2.29
160 164 3.760684 AGATGCGCTCCATTTCTTTTTCT 59.239 39.130 9.73 0.00 33.29 2.52
187 191 6.293298 CGGGCATCACAAAAATCATTTCAAAA 60.293 34.615 0.00 0.00 0.00 2.44
257 267 0.466124 AGATAACGAAGGAGGCTGGC 59.534 55.000 0.00 0.00 0.00 4.85
302 320 4.797933 GCGAGAGGAAAGAAAAGAGACTGT 60.798 45.833 0.00 0.00 0.00 3.55
327 345 1.518102 GAATGTTATGCGCGCAAATGG 59.482 47.619 39.68 0.00 0.00 3.16
359 377 1.552337 ACATAGCACACAGACCTCAGG 59.448 52.381 0.00 0.00 0.00 3.86
484 523 4.455606 AGCTGGGATCAAGTAACATAAGC 58.544 43.478 0.00 0.00 0.00 3.09
496 535 5.036737 AGTAACATAAGCAATCGCAAATGC 58.963 37.500 0.00 0.00 42.27 3.56
521 563 7.356540 CAATAGTACTAGATCGTTCCTCTGTG 58.643 42.308 8.85 0.00 0.00 3.66
528 570 4.537751 AGATCGTTCCTCTGTGGATTAGA 58.462 43.478 0.00 0.88 45.68 2.10
574 623 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
575 624 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
577 626 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
578 627 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
579 628 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
581 630 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
582 631 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
583 632 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
584 633 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
585 634 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
586 635 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
587 636 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
614 759 8.166061 AGAGAGAGAGAGATTACAATCTGCTAT 58.834 37.037 9.16 4.23 45.39 2.97
665 827 1.203994 CATACCGTGGAAGGAACGAGT 59.796 52.381 0.00 0.00 43.68 4.18
684 846 0.717224 TTCGATAAGAAACGGTGCGC 59.283 50.000 0.00 0.00 35.61 6.09
749 916 0.619543 AATACTACCCGGCCACCAGT 60.620 55.000 2.24 2.29 0.00 4.00
757 924 1.602237 CGGCCACCAGTAATCCTGT 59.398 57.895 2.24 0.00 39.74 4.00
758 925 0.744414 CGGCCACCAGTAATCCTGTG 60.744 60.000 2.24 0.00 39.74 3.66
771 938 4.873129 CTGTGCCGTCCGATCCCG 62.873 72.222 0.00 0.00 0.00 5.14
776 943 2.827190 CCGTCCGATCCCGTCTCA 60.827 66.667 0.00 0.00 0.00 3.27
861 1034 3.070878 CACACCCCCAATAAATATTGCCC 59.929 47.826 7.50 0.00 41.23 5.36
1197 1385 3.385384 TCGTGGAGGGAGCAGCTG 61.385 66.667 10.11 10.11 0.00 4.24
1456 1644 0.458025 CTTCAGCGGTCGGTAACCTC 60.458 60.000 0.00 0.00 46.87 3.85
1607 1996 7.857569 TCTTACCTTCGTATGAAAAGTTTGTG 58.142 34.615 0.00 0.00 32.66 3.33
1608 1997 7.711772 TCTTACCTTCGTATGAAAAGTTTGTGA 59.288 33.333 0.00 0.00 32.66 3.58
1616 2006 8.708742 TCGTATGAAAAGTTTGTGAGACATAAG 58.291 33.333 0.00 0.00 0.00 1.73
1687 2077 1.411612 GGGATTCGTCGTAATCTGGGT 59.588 52.381 13.44 0.00 36.34 4.51
1694 2084 2.363038 CGTCGTAATCTGGGTTATGGGA 59.637 50.000 0.00 0.00 0.00 4.37
1736 2126 0.105246 ATCTGGGCTCAGGAGGTAGG 60.105 60.000 15.13 0.00 41.23 3.18
1828 2225 3.574826 CCCCAAGGAAAAATACGAACCAA 59.425 43.478 0.00 0.00 33.47 3.67
1890 2287 3.350219 ACGATAGGGAAAGCACAACAT 57.650 42.857 0.00 0.00 43.77 2.71
1945 2343 0.949105 GGTGTGTTAGGTGGACTGCG 60.949 60.000 0.00 0.00 0.00 5.18
2237 2637 3.584406 ATAGATAGATGCACGGCTCAC 57.416 47.619 0.00 0.00 0.00 3.51
2394 2799 8.421784 GGGAATACTTTCATGTGATAGTCACTA 58.578 37.037 8.97 0.00 39.59 2.74
2419 2824 6.609237 TTTCATTTCACAGACTTGAGAGTG 57.391 37.500 0.00 0.00 35.88 3.51
2430 2835 2.433318 GAGAGTGCCCGTGACAGC 60.433 66.667 0.00 0.00 0.00 4.40
2455 2860 2.116366 ACGCGTTGCTGATTTGAAAAC 58.884 42.857 5.58 0.00 0.00 2.43
2562 2978 4.155826 TGCAACTGCACCAGTATCAAATAC 59.844 41.667 0.00 0.00 44.62 1.89
2563 2979 4.155826 GCAACTGCACCAGTATCAAATACA 59.844 41.667 0.00 0.00 44.62 2.29
2564 2980 5.674569 GCAACTGCACCAGTATCAAATACAG 60.675 44.000 0.00 0.00 44.62 2.74
2565 2981 5.165961 ACTGCACCAGTATCAAATACAGT 57.834 39.130 0.00 0.00 43.46 3.55
2566 2982 6.294361 ACTGCACCAGTATCAAATACAGTA 57.706 37.500 0.00 0.00 43.46 2.74
2567 2983 6.341316 ACTGCACCAGTATCAAATACAGTAG 58.659 40.000 0.00 0.00 43.46 2.57
2568 2984 6.070767 ACTGCACCAGTATCAAATACAGTAGT 60.071 38.462 0.00 0.00 43.46 2.73
2612 3028 8.165428 GCGCTGATTAACTGATTATCTATGTTC 58.835 37.037 0.00 0.00 0.00 3.18
2748 3171 5.234752 CACATAACCCTTTTTACCTTTGCC 58.765 41.667 0.00 0.00 0.00 4.52
2749 3172 4.902448 ACATAACCCTTTTTACCTTTGCCA 59.098 37.500 0.00 0.00 0.00 4.92
2753 3176 4.231273 ACCCTTTTTACCTTTGCCAATCT 58.769 39.130 0.00 0.00 0.00 2.40
2954 3377 3.339141 GAACATCAAGGAACCTCACCTC 58.661 50.000 0.00 0.00 36.67 3.85
3028 3451 5.047802 CACTTGTGCCCATGAGAAAAGTAAT 60.048 40.000 0.00 0.00 0.00 1.89
3627 4171 4.460263 AGTGTCTGAACATTTGCTTACCA 58.540 39.130 0.00 0.00 37.81 3.25
3631 4175 5.123820 TGTCTGAACATTTGCTTACCATAGC 59.876 40.000 0.00 0.00 41.59 2.97
3938 4483 4.570369 CCAACAATGTTGTCTGAAAAACCC 59.430 41.667 22.66 0.00 41.31 4.11
4035 4580 6.601332 TCTTGGGGATGGATTGTATAACTTC 58.399 40.000 0.00 0.00 0.00 3.01
4248 4793 5.243954 AGTTGCTTCTATATCTATCGGCACA 59.756 40.000 0.00 0.00 0.00 4.57
4305 4850 5.643379 ACATTTTAGTTGCCTATGTGGTG 57.357 39.130 0.00 0.00 38.35 4.17
4527 5072 3.118038 AGACTGGTTACTTGACTTTGGCA 60.118 43.478 0.00 0.00 0.00 4.92
4623 5168 2.551071 GCTGTTCTACAAGGCCTTCAGT 60.551 50.000 23.31 18.64 0.00 3.41
4656 5201 2.124736 GGCAGCGAATACCCAGCA 60.125 61.111 0.00 0.00 0.00 4.41
4719 5264 0.537143 ATGGCTTCAACACGCTTCCA 60.537 50.000 0.00 0.00 0.00 3.53
4720 5265 0.749818 TGGCTTCAACACGCTTCCAA 60.750 50.000 0.00 0.00 0.00 3.53
4755 5300 2.099921 TCTCTGCTACATCTTCTTCGCC 59.900 50.000 0.00 0.00 0.00 5.54
4968 5513 1.880027 GTCGCTTCAGGGTTGATTTGT 59.120 47.619 0.00 0.00 32.27 2.83
5317 5874 5.599999 ACTTTAGAGGCAGAACGACATAT 57.400 39.130 0.00 0.00 0.00 1.78
5320 5877 7.203910 ACTTTAGAGGCAGAACGACATATTAG 58.796 38.462 0.00 0.00 0.00 1.73
5321 5878 4.592485 AGAGGCAGAACGACATATTAGG 57.408 45.455 0.00 0.00 0.00 2.69
5322 5879 3.961408 AGAGGCAGAACGACATATTAGGT 59.039 43.478 0.00 0.00 0.00 3.08
5324 5881 3.451178 AGGCAGAACGACATATTAGGTGT 59.549 43.478 0.00 0.00 0.00 4.16
5325 5882 4.647853 AGGCAGAACGACATATTAGGTGTA 59.352 41.667 0.00 0.00 0.00 2.90
5327 5884 4.444720 GCAGAACGACATATTAGGTGTAGC 59.555 45.833 0.00 0.00 0.00 3.58
5364 5926 3.897141 TGTGTCTTGTGTAACTGTGGA 57.103 42.857 0.00 0.00 38.04 4.02
5365 5927 4.415881 TGTGTCTTGTGTAACTGTGGAT 57.584 40.909 0.00 0.00 38.04 3.41
5366 5928 4.126437 TGTGTCTTGTGTAACTGTGGATG 58.874 43.478 0.00 0.00 38.04 3.51
5367 5929 4.127171 GTGTCTTGTGTAACTGTGGATGT 58.873 43.478 0.00 0.00 38.04 3.06
5368 5930 4.574828 GTGTCTTGTGTAACTGTGGATGTT 59.425 41.667 0.00 0.00 38.04 2.71
5369 5931 4.574421 TGTCTTGTGTAACTGTGGATGTTG 59.426 41.667 0.00 0.00 38.04 3.33
5370 5932 4.574828 GTCTTGTGTAACTGTGGATGTTGT 59.425 41.667 0.00 0.00 38.04 3.32
5371 5933 5.065988 GTCTTGTGTAACTGTGGATGTTGTT 59.934 40.000 0.00 0.00 38.04 2.83
5372 5934 5.295787 TCTTGTGTAACTGTGGATGTTGTTC 59.704 40.000 0.00 0.00 38.04 3.18
5373 5935 4.776349 TGTGTAACTGTGGATGTTGTTCT 58.224 39.130 0.00 0.00 38.04 3.01
5374 5936 4.574421 TGTGTAACTGTGGATGTTGTTCTG 59.426 41.667 0.00 0.00 38.04 3.02
5375 5937 3.563808 TGTAACTGTGGATGTTGTTCTGC 59.436 43.478 0.00 0.00 0.00 4.26
5376 5938 2.645838 ACTGTGGATGTTGTTCTGCT 57.354 45.000 0.00 0.00 0.00 4.24
5377 5939 2.498167 ACTGTGGATGTTGTTCTGCTC 58.502 47.619 0.00 0.00 0.00 4.26
5378 5940 1.462283 CTGTGGATGTTGTTCTGCTCG 59.538 52.381 0.00 0.00 0.00 5.03
5379 5941 1.069978 TGTGGATGTTGTTCTGCTCGA 59.930 47.619 0.00 0.00 0.00 4.04
5380 5942 2.289631 TGTGGATGTTGTTCTGCTCGAT 60.290 45.455 0.00 0.00 0.00 3.59
5381 5943 3.056179 TGTGGATGTTGTTCTGCTCGATA 60.056 43.478 0.00 0.00 0.00 2.92
5382 5944 3.553511 GTGGATGTTGTTCTGCTCGATAG 59.446 47.826 0.00 0.00 0.00 2.08
5406 5969 3.205338 TGTGAGTTGTGACATGTTCCTG 58.795 45.455 0.00 0.00 0.00 3.86
5409 5972 2.224606 AGTTGTGACATGTTCCTGCAG 58.775 47.619 6.78 6.78 0.00 4.41
5476 6039 2.476534 ATTGAAACTGCGGCCTTGCG 62.477 55.000 0.00 0.00 37.81 4.85
5477 6040 4.404654 GAAACTGCGGCCTTGCGG 62.405 66.667 9.68 9.68 46.83 5.69
5488 6051 0.737367 GCCTTGCGGAAAAGATTGCC 60.737 55.000 0.00 0.00 0.00 4.52
5502 6065 3.836949 AGATTGCCGTTTAGTGCATTTG 58.163 40.909 0.00 0.00 37.33 2.32
5505 6068 3.546002 TGCCGTTTAGTGCATTTGTAC 57.454 42.857 0.00 0.00 31.31 2.90
5508 6071 2.814919 CCGTTTAGTGCATTTGTACCCA 59.185 45.455 0.00 0.00 0.00 4.51
5553 6322 5.371176 TGATCCCCAAGCTTACATACCATAA 59.629 40.000 0.00 0.00 0.00 1.90
5555 6324 6.274322 TCCCCAAGCTTACATACCATAAAT 57.726 37.500 0.00 0.00 0.00 1.40
5556 6325 6.303839 TCCCCAAGCTTACATACCATAAATC 58.696 40.000 0.00 0.00 0.00 2.17
5557 6326 5.476945 CCCCAAGCTTACATACCATAAATCC 59.523 44.000 0.00 0.00 0.00 3.01
5558 6327 6.068010 CCCAAGCTTACATACCATAAATCCA 58.932 40.000 0.00 0.00 0.00 3.41
5568 6341 6.615726 ACATACCATAAATCCACTGTCTACCT 59.384 38.462 0.00 0.00 0.00 3.08
5591 6374 6.498651 CCTACATAAATATCCCTCAGTGACCT 59.501 42.308 0.00 0.00 0.00 3.85
5592 6375 6.426646 ACATAAATATCCCTCAGTGACCTC 57.573 41.667 0.00 0.00 0.00 3.85
5594 6377 2.002505 ATATCCCTCAGTGACCTCCG 57.997 55.000 0.00 0.00 0.00 4.63
5595 6378 0.755698 TATCCCTCAGTGACCTCCGC 60.756 60.000 0.00 0.00 0.00 5.54
5596 6379 2.805313 ATCCCTCAGTGACCTCCGCA 62.805 60.000 0.00 0.00 0.00 5.69
5597 6380 2.575993 CCTCAGTGACCTCCGCAG 59.424 66.667 0.00 0.00 0.00 5.18
5598 6381 2.125753 CTCAGTGACCTCCGCAGC 60.126 66.667 0.00 0.00 0.00 5.25
5599 6382 2.917227 TCAGTGACCTCCGCAGCA 60.917 61.111 0.00 0.00 0.00 4.41
5600 6383 2.433838 CAGTGACCTCCGCAGCAG 60.434 66.667 0.00 0.00 0.00 4.24
5622 6405 2.915659 TGACCCCGTTGAGCTCGT 60.916 61.111 9.64 0.00 0.00 4.18
5680 6465 2.282180 GCCCTTCGGTGCTTTCCA 60.282 61.111 0.00 0.00 0.00 3.53
5681 6466 2.626780 GCCCTTCGGTGCTTTCCAC 61.627 63.158 0.00 0.00 43.90 4.02
5688 6473 2.954611 GTGCTTTCCACCGCCTTC 59.045 61.111 0.00 0.00 38.55 3.46
5689 6474 2.282180 TGCTTTCCACCGCCTTCC 60.282 61.111 0.00 0.00 0.00 3.46
5690 6475 2.282180 GCTTTCCACCGCCTTCCA 60.282 61.111 0.00 0.00 0.00 3.53
5691 6476 1.678970 GCTTTCCACCGCCTTCCAT 60.679 57.895 0.00 0.00 0.00 3.41
5692 6477 1.937546 GCTTTCCACCGCCTTCCATG 61.938 60.000 0.00 0.00 0.00 3.66
5693 6478 0.609131 CTTTCCACCGCCTTCCATGT 60.609 55.000 0.00 0.00 0.00 3.21
5694 6479 0.178975 TTTCCACCGCCTTCCATGTT 60.179 50.000 0.00 0.00 0.00 2.71
5695 6480 0.178975 TTCCACCGCCTTCCATGTTT 60.179 50.000 0.00 0.00 0.00 2.83
5696 6481 0.178975 TCCACCGCCTTCCATGTTTT 60.179 50.000 0.00 0.00 0.00 2.43
5697 6482 0.038343 CCACCGCCTTCCATGTTTTG 60.038 55.000 0.00 0.00 0.00 2.44
5698 6483 0.667184 CACCGCCTTCCATGTTTTGC 60.667 55.000 0.00 0.00 0.00 3.68
5699 6484 1.444212 CCGCCTTCCATGTTTTGCG 60.444 57.895 9.19 9.19 41.51 4.85
5700 6485 1.285641 CGCCTTCCATGTTTTGCGT 59.714 52.632 8.27 0.00 37.44 5.24
5701 6486 1.003262 CGCCTTCCATGTTTTGCGTG 61.003 55.000 8.27 0.00 37.44 5.34
5705 6490 2.430582 CCATGTTTTGCGTGGCCG 60.431 61.111 0.00 0.00 46.20 6.13
5716 6501 4.322385 GTGGCCGCCGTGTGTTTC 62.322 66.667 4.45 0.00 0.00 2.78
5717 6502 4.858680 TGGCCGCCGTGTGTTTCA 62.859 61.111 4.58 0.00 0.00 2.69
5718 6503 3.361977 GGCCGCCGTGTGTTTCAT 61.362 61.111 0.00 0.00 0.00 2.57
5719 6504 2.642700 GCCGCCGTGTGTTTCATT 59.357 55.556 0.00 0.00 0.00 2.57
5720 6505 1.007849 GCCGCCGTGTGTTTCATTT 60.008 52.632 0.00 0.00 0.00 2.32
5721 6506 1.274798 GCCGCCGTGTGTTTCATTTG 61.275 55.000 0.00 0.00 0.00 2.32
5722 6507 0.030101 CCGCCGTGTGTTTCATTTGT 59.970 50.000 0.00 0.00 0.00 2.83
5723 6508 1.264557 CCGCCGTGTGTTTCATTTGTA 59.735 47.619 0.00 0.00 0.00 2.41
5724 6509 2.095466 CCGCCGTGTGTTTCATTTGTAT 60.095 45.455 0.00 0.00 0.00 2.29
5725 6510 2.908009 CGCCGTGTGTTTCATTTGTATG 59.092 45.455 0.00 0.00 0.00 2.39
5726 6511 3.608241 CGCCGTGTGTTTCATTTGTATGT 60.608 43.478 0.00 0.00 33.34 2.29
5727 6512 4.295051 GCCGTGTGTTTCATTTGTATGTT 58.705 39.130 0.00 0.00 33.34 2.71
5728 6513 4.148000 GCCGTGTGTTTCATTTGTATGTTG 59.852 41.667 0.00 0.00 33.34 3.33
5729 6514 4.148000 CCGTGTGTTTCATTTGTATGTTGC 59.852 41.667 0.00 0.00 33.34 4.17
5730 6515 4.737279 CGTGTGTTTCATTTGTATGTTGCA 59.263 37.500 0.00 0.00 33.34 4.08
5731 6516 5.401972 CGTGTGTTTCATTTGTATGTTGCAT 59.598 36.000 0.00 0.00 33.34 3.96
5732 6517 6.074409 CGTGTGTTTCATTTGTATGTTGCATT 60.074 34.615 0.00 0.00 33.34 3.56
5733 6518 7.516470 CGTGTGTTTCATTTGTATGTTGCATTT 60.516 33.333 0.00 0.00 33.34 2.32
5734 6519 7.793427 GTGTGTTTCATTTGTATGTTGCATTTC 59.207 33.333 0.00 0.00 33.34 2.17
5735 6520 7.493645 TGTGTTTCATTTGTATGTTGCATTTCA 59.506 29.630 0.00 0.00 33.34 2.69
5736 6521 8.497554 GTGTTTCATTTGTATGTTGCATTTCAT 58.502 29.630 0.00 0.00 33.34 2.57
5737 6522 8.710551 TGTTTCATTTGTATGTTGCATTTCATC 58.289 29.630 0.00 0.00 33.34 2.92
5738 6523 8.710551 GTTTCATTTGTATGTTGCATTTCATCA 58.289 29.630 0.00 0.00 33.34 3.07
5739 6524 9.438228 TTTCATTTGTATGTTGCATTTCATCAT 57.562 25.926 0.00 0.00 38.35 2.45
5741 6526 9.738832 TCATTTGTATGTTGCATTTCATCATAG 57.261 29.630 0.00 0.00 37.78 2.23
5742 6527 7.990541 TTTGTATGTTGCATTTCATCATAGC 57.009 32.000 0.00 0.00 37.78 2.97
5743 6528 6.696441 TGTATGTTGCATTTCATCATAGCA 57.304 33.333 0.00 0.00 37.78 3.49
5744 6529 7.279750 TGTATGTTGCATTTCATCATAGCAT 57.720 32.000 0.00 0.00 37.78 3.79
5745 6530 7.364970 TGTATGTTGCATTTCATCATAGCATC 58.635 34.615 0.00 0.00 37.78 3.91
5746 6531 5.838531 TGTTGCATTTCATCATAGCATCA 57.161 34.783 0.00 0.00 34.87 3.07
5747 6532 6.399639 TGTTGCATTTCATCATAGCATCAT 57.600 33.333 0.00 0.00 34.87 2.45
5748 6533 6.212955 TGTTGCATTTCATCATAGCATCATG 58.787 36.000 0.00 0.00 34.87 3.07
5749 6534 4.805219 TGCATTTCATCATAGCATCATGC 58.195 39.130 0.00 0.00 45.46 4.06
5778 6563 6.956299 GCATCTGCATGTTTTCATAAAGTT 57.044 33.333 0.00 0.00 38.64 2.66
5779 6564 7.355332 GCATCTGCATGTTTTCATAAAGTTT 57.645 32.000 0.00 0.00 38.64 2.66
5780 6565 7.231607 GCATCTGCATGTTTTCATAAAGTTTG 58.768 34.615 0.00 0.00 38.64 2.93
5781 6566 6.768029 TCTGCATGTTTTCATAAAGTTTGC 57.232 33.333 0.00 0.00 38.64 3.68
5782 6567 6.279123 TCTGCATGTTTTCATAAAGTTTGCA 58.721 32.000 0.00 0.00 38.64 4.08
5783 6568 6.930164 TCTGCATGTTTTCATAAAGTTTGCAT 59.070 30.769 0.00 0.00 38.64 3.96
5784 6569 7.116662 TCTGCATGTTTTCATAAAGTTTGCATC 59.883 33.333 0.00 0.00 38.64 3.91
5785 6570 6.147492 TGCATGTTTTCATAAAGTTTGCATCC 59.853 34.615 0.00 0.00 38.64 3.51
5786 6571 6.670452 GCATGTTTTCATAAAGTTTGCATCCG 60.670 38.462 0.00 0.00 38.64 4.18
5787 6572 5.837437 TGTTTTCATAAAGTTTGCATCCGT 58.163 33.333 0.00 0.00 0.00 4.69
5788 6573 6.276847 TGTTTTCATAAAGTTTGCATCCGTT 58.723 32.000 0.00 0.00 0.00 4.44
5789 6574 6.419413 TGTTTTCATAAAGTTTGCATCCGTTC 59.581 34.615 0.00 0.00 0.00 3.95
5790 6575 4.335082 TCATAAAGTTTGCATCCGTTCG 57.665 40.909 0.00 0.00 0.00 3.95
5791 6576 3.749088 TCATAAAGTTTGCATCCGTTCGT 59.251 39.130 0.00 0.00 0.00 3.85
5792 6577 4.930405 TCATAAAGTTTGCATCCGTTCGTA 59.070 37.500 0.00 0.00 0.00 3.43
5793 6578 3.806316 AAAGTTTGCATCCGTTCGTAG 57.194 42.857 0.00 0.00 0.00 3.51
5794 6579 2.450609 AGTTTGCATCCGTTCGTAGT 57.549 45.000 0.00 0.00 0.00 2.73
5795 6580 2.762745 AGTTTGCATCCGTTCGTAGTT 58.237 42.857 0.00 0.00 0.00 2.24
5796 6581 2.478894 AGTTTGCATCCGTTCGTAGTTG 59.521 45.455 0.00 0.00 0.00 3.16
5797 6582 0.793861 TTGCATCCGTTCGTAGTTGC 59.206 50.000 0.00 0.00 0.00 4.17
5798 6583 1.017177 TGCATCCGTTCGTAGTTGCC 61.017 55.000 0.00 0.00 0.00 4.52
5799 6584 1.995991 CATCCGTTCGTAGTTGCCG 59.004 57.895 0.00 0.00 0.00 5.69
5800 6585 1.808390 ATCCGTTCGTAGTTGCCGC 60.808 57.895 0.00 0.00 0.00 6.53
5801 6586 3.834373 CCGTTCGTAGTTGCCGCG 61.834 66.667 0.00 0.00 0.00 6.46
5802 6587 3.101428 CGTTCGTAGTTGCCGCGT 61.101 61.111 4.92 0.00 0.00 6.01
5803 6588 2.767697 GTTCGTAGTTGCCGCGTC 59.232 61.111 4.92 0.00 0.00 5.19
5804 6589 2.431260 TTCGTAGTTGCCGCGTCC 60.431 61.111 4.92 0.00 0.00 4.79
5805 6590 3.919973 TTCGTAGTTGCCGCGTCCC 62.920 63.158 4.92 0.00 0.00 4.46
5806 6591 4.430765 CGTAGTTGCCGCGTCCCT 62.431 66.667 4.92 0.00 0.00 4.20
5807 6592 2.887360 GTAGTTGCCGCGTCCCTA 59.113 61.111 4.92 0.00 0.00 3.53
5808 6593 1.517913 GTAGTTGCCGCGTCCCTAC 60.518 63.158 4.92 6.07 0.00 3.18
5809 6594 1.679977 TAGTTGCCGCGTCCCTACT 60.680 57.895 4.92 8.05 0.00 2.57
5810 6595 1.660560 TAGTTGCCGCGTCCCTACTC 61.661 60.000 4.92 0.00 0.00 2.59
5811 6596 4.124351 TTGCCGCGTCCCTACTCG 62.124 66.667 4.92 0.00 33.65 4.18
5816 6601 3.902086 GCGTCCCTACTCGCCTCC 61.902 72.222 0.00 0.00 45.54 4.30
5817 6602 3.584052 CGTCCCTACTCGCCTCCG 61.584 72.222 0.00 0.00 0.00 4.63
5818 6603 2.439883 GTCCCTACTCGCCTCCGT 60.440 66.667 0.00 0.00 35.54 4.69
5819 6604 2.050934 GTCCCTACTCGCCTCCGTT 61.051 63.158 0.00 0.00 35.54 4.44
5820 6605 2.050350 TCCCTACTCGCCTCCGTTG 61.050 63.158 0.00 0.00 35.54 4.10
5821 6606 2.050350 CCCTACTCGCCTCCGTTGA 61.050 63.158 0.00 0.00 35.54 3.18
5822 6607 1.139095 CCTACTCGCCTCCGTTGAC 59.861 63.158 0.00 0.00 35.54 3.18
5823 6608 1.139095 CTACTCGCCTCCGTTGACC 59.861 63.158 0.00 0.00 35.54 4.02
5824 6609 1.303888 TACTCGCCTCCGTTGACCT 60.304 57.895 0.00 0.00 35.54 3.85
5825 6610 0.896940 TACTCGCCTCCGTTGACCTT 60.897 55.000 0.00 0.00 35.54 3.50
5826 6611 1.004918 CTCGCCTCCGTTGACCTTT 60.005 57.895 0.00 0.00 35.54 3.11
5827 6612 1.005394 TCGCCTCCGTTGACCTTTC 60.005 57.895 0.00 0.00 35.54 2.62
5828 6613 1.004918 CGCCTCCGTTGACCTTTCT 60.005 57.895 0.00 0.00 0.00 2.52
5829 6614 1.014564 CGCCTCCGTTGACCTTTCTC 61.015 60.000 0.00 0.00 0.00 2.87
5830 6615 0.034896 GCCTCCGTTGACCTTTCTCA 59.965 55.000 0.00 0.00 0.00 3.27
5831 6616 1.941668 GCCTCCGTTGACCTTTCTCAG 60.942 57.143 0.00 0.00 0.00 3.35
5832 6617 1.344763 CCTCCGTTGACCTTTCTCAGT 59.655 52.381 0.00 0.00 0.00 3.41
5833 6618 2.610727 CCTCCGTTGACCTTTCTCAGTC 60.611 54.545 0.00 0.00 0.00 3.51
5834 6619 1.343465 TCCGTTGACCTTTCTCAGTCC 59.657 52.381 0.00 0.00 31.76 3.85
5835 6620 1.070134 CCGTTGACCTTTCTCAGTCCA 59.930 52.381 0.00 0.00 31.76 4.02
5836 6621 2.484770 CCGTTGACCTTTCTCAGTCCAA 60.485 50.000 0.00 0.00 31.76 3.53
5837 6622 2.544267 CGTTGACCTTTCTCAGTCCAAC 59.456 50.000 0.00 0.00 33.13 3.77
5838 6623 2.879026 GTTGACCTTTCTCAGTCCAACC 59.121 50.000 0.00 0.00 31.57 3.77
5839 6624 1.070134 TGACCTTTCTCAGTCCAACCG 59.930 52.381 0.00 0.00 31.76 4.44
5840 6625 1.070289 GACCTTTCTCAGTCCAACCGT 59.930 52.381 0.00 0.00 0.00 4.83
5841 6626 1.489230 ACCTTTCTCAGTCCAACCGTT 59.511 47.619 0.00 0.00 0.00 4.44
5842 6627 2.143925 CCTTTCTCAGTCCAACCGTTC 58.856 52.381 0.00 0.00 0.00 3.95
5843 6628 2.224305 CCTTTCTCAGTCCAACCGTTCT 60.224 50.000 0.00 0.00 0.00 3.01
5844 6629 3.467803 CTTTCTCAGTCCAACCGTTCTT 58.532 45.455 0.00 0.00 0.00 2.52
5845 6630 3.553828 TTCTCAGTCCAACCGTTCTTT 57.446 42.857 0.00 0.00 0.00 2.52
5846 6631 3.553828 TCTCAGTCCAACCGTTCTTTT 57.446 42.857 0.00 0.00 0.00 2.27
5847 6632 3.202906 TCTCAGTCCAACCGTTCTTTTG 58.797 45.455 0.00 0.00 0.00 2.44
5848 6633 2.943033 CTCAGTCCAACCGTTCTTTTGT 59.057 45.455 0.00 0.00 0.00 2.83
5849 6634 3.349022 TCAGTCCAACCGTTCTTTTGTT 58.651 40.909 0.00 0.00 0.00 2.83
5850 6635 3.127895 TCAGTCCAACCGTTCTTTTGTTG 59.872 43.478 0.00 0.00 39.20 3.33
5851 6636 3.086282 AGTCCAACCGTTCTTTTGTTGT 58.914 40.909 0.00 0.00 38.10 3.32
5852 6637 3.128068 AGTCCAACCGTTCTTTTGTTGTC 59.872 43.478 0.00 0.00 38.10 3.18
5853 6638 2.424246 TCCAACCGTTCTTTTGTTGTCC 59.576 45.455 0.00 0.00 38.10 4.02
5854 6639 2.446282 CAACCGTTCTTTTGTTGTCCG 58.554 47.619 0.00 0.00 35.72 4.79
5855 6640 2.027003 ACCGTTCTTTTGTTGTCCGA 57.973 45.000 0.00 0.00 0.00 4.55
5856 6641 1.667212 ACCGTTCTTTTGTTGTCCGAC 59.333 47.619 0.00 0.00 0.00 4.79
5857 6642 1.003223 CCGTTCTTTTGTTGTCCGACC 60.003 52.381 0.00 0.00 0.00 4.79
5858 6643 1.666700 CGTTCTTTTGTTGTCCGACCA 59.333 47.619 0.00 0.00 0.00 4.02
5859 6644 2.289547 CGTTCTTTTGTTGTCCGACCAT 59.710 45.455 0.00 0.00 0.00 3.55
5860 6645 3.242936 CGTTCTTTTGTTGTCCGACCATT 60.243 43.478 0.00 0.00 0.00 3.16
5861 6646 4.678622 GTTCTTTTGTTGTCCGACCATTT 58.321 39.130 0.00 0.00 0.00 2.32
5862 6647 4.300189 TCTTTTGTTGTCCGACCATTTG 57.700 40.909 0.00 0.00 0.00 2.32
5863 6648 3.948473 TCTTTTGTTGTCCGACCATTTGA 59.052 39.130 0.00 0.00 0.00 2.69
5864 6649 3.701532 TTTGTTGTCCGACCATTTGAC 57.298 42.857 0.00 0.00 0.00 3.18
5865 6650 1.600023 TGTTGTCCGACCATTTGACC 58.400 50.000 0.00 0.00 0.00 4.02
5866 6651 0.879090 GTTGTCCGACCATTTGACCC 59.121 55.000 0.00 0.00 0.00 4.46
5867 6652 0.768622 TTGTCCGACCATTTGACCCT 59.231 50.000 0.00 0.00 0.00 4.34
5868 6653 0.323629 TGTCCGACCATTTGACCCTC 59.676 55.000 0.00 0.00 0.00 4.30
5869 6654 0.613777 GTCCGACCATTTGACCCTCT 59.386 55.000 0.00 0.00 0.00 3.69
5870 6655 0.902531 TCCGACCATTTGACCCTCTC 59.097 55.000 0.00 0.00 0.00 3.20
5871 6656 0.905357 CCGACCATTTGACCCTCTCT 59.095 55.000 0.00 0.00 0.00 3.10
5872 6657 1.406069 CCGACCATTTGACCCTCTCTG 60.406 57.143 0.00 0.00 0.00 3.35
5873 6658 1.743996 GACCATTTGACCCTCTCTGC 58.256 55.000 0.00 0.00 0.00 4.26
5874 6659 1.003580 GACCATTTGACCCTCTCTGCA 59.996 52.381 0.00 0.00 0.00 4.41
5875 6660 1.271597 ACCATTTGACCCTCTCTGCAC 60.272 52.381 0.00 0.00 0.00 4.57
5876 6661 1.271543 CCATTTGACCCTCTCTGCACA 60.272 52.381 0.00 0.00 0.00 4.57
5877 6662 2.082231 CATTTGACCCTCTCTGCACAG 58.918 52.381 0.00 0.00 0.00 3.66
5878 6663 1.131638 TTTGACCCTCTCTGCACAGT 58.868 50.000 0.00 0.00 0.00 3.55
5879 6664 0.394192 TTGACCCTCTCTGCACAGTG 59.606 55.000 0.00 0.00 0.00 3.66
5880 6665 1.375268 GACCCTCTCTGCACAGTGC 60.375 63.158 19.37 19.37 45.29 4.40
5889 6674 2.980233 GCACAGTGCACTGACCCC 60.980 66.667 44.82 27.10 46.59 4.95
5890 6675 2.281761 CACAGTGCACTGACCCCC 60.282 66.667 44.82 6.19 46.59 5.40
5891 6676 2.448542 ACAGTGCACTGACCCCCT 60.449 61.111 44.82 24.25 46.59 4.79
5892 6677 2.348998 CAGTGCACTGACCCCCTC 59.651 66.667 38.12 0.00 46.59 4.30
5893 6678 3.314331 AGTGCACTGACCCCCTCG 61.314 66.667 20.97 0.00 0.00 4.63
5920 6705 4.391869 GGAAGTTGTCCCGAACCC 57.608 61.111 0.00 0.00 41.10 4.11
5921 6706 1.670083 GGAAGTTGTCCCGAACCCG 60.670 63.158 0.00 0.00 41.10 5.28
5922 6707 1.368579 GAAGTTGTCCCGAACCCGA 59.631 57.895 0.00 0.00 38.22 5.14
5923 6708 0.947660 GAAGTTGTCCCGAACCCGAC 60.948 60.000 0.00 0.00 38.22 4.79
5924 6709 2.357881 GTTGTCCCGAACCCGACC 60.358 66.667 0.00 0.00 38.22 4.79
5925 6710 3.628982 TTGTCCCGAACCCGACCC 61.629 66.667 0.00 0.00 38.22 4.46
5931 6716 4.796231 CGAACCCGACCCGCTCTG 62.796 72.222 0.00 0.00 38.22 3.35
5932 6717 3.692406 GAACCCGACCCGCTCTGT 61.692 66.667 0.00 0.00 0.00 3.41
5933 6718 3.644399 GAACCCGACCCGCTCTGTC 62.644 68.421 0.00 0.00 0.00 3.51
5934 6719 4.988716 ACCCGACCCGCTCTGTCA 62.989 66.667 0.00 0.00 32.91 3.58
5935 6720 3.461773 CCCGACCCGCTCTGTCAT 61.462 66.667 0.00 0.00 32.91 3.06
5936 6721 2.202797 CCGACCCGCTCTGTCATG 60.203 66.667 0.00 0.00 32.91 3.07
5937 6722 2.710902 CCGACCCGCTCTGTCATGA 61.711 63.158 0.00 0.00 32.91 3.07
5938 6723 1.517257 CGACCCGCTCTGTCATGAC 60.517 63.158 19.27 19.27 32.91 3.06
5939 6724 1.153549 GACCCGCTCTGTCATGACC 60.154 63.158 22.85 6.58 32.91 4.02
5940 6725 1.888436 GACCCGCTCTGTCATGACCA 61.888 60.000 22.85 8.78 32.91 4.02
5941 6726 1.296392 CCCGCTCTGTCATGACCAA 59.704 57.895 22.85 9.96 0.00 3.67
5942 6727 0.107508 CCCGCTCTGTCATGACCAAT 60.108 55.000 22.85 0.00 0.00 3.16
5943 6728 1.012086 CCGCTCTGTCATGACCAATG 58.988 55.000 22.85 11.30 37.66 2.82
5944 6729 1.012086 CGCTCTGTCATGACCAATGG 58.988 55.000 22.85 0.00 36.86 3.16
5945 6730 1.386533 GCTCTGTCATGACCAATGGG 58.613 55.000 22.85 11.28 36.86 4.00
5956 6741 3.329300 CCAATGGGTCCGGATCATC 57.671 57.895 18.43 0.00 0.00 2.92
5957 6742 0.250901 CCAATGGGTCCGGATCATCC 60.251 60.000 18.43 8.83 0.00 3.51
5958 6743 0.250901 CAATGGGTCCGGATCATCCC 60.251 60.000 18.43 18.70 40.26 3.85
5959 6744 1.427072 AATGGGTCCGGATCATCCCC 61.427 60.000 21.94 20.12 39.20 4.81
5960 6745 2.122369 GGGTCCGGATCATCCCCT 60.122 66.667 18.43 0.00 34.32 4.79
5961 6746 1.157751 GGGTCCGGATCATCCCCTA 59.842 63.158 18.43 0.00 34.32 3.53
5962 6747 0.473117 GGGTCCGGATCATCCCCTAA 60.473 60.000 18.43 0.00 34.32 2.69
5963 6748 0.685660 GGTCCGGATCATCCCCTAAC 59.314 60.000 10.69 0.00 31.13 2.34
5964 6749 1.420430 GTCCGGATCATCCCCTAACA 58.580 55.000 7.81 0.00 31.13 2.41
5965 6750 1.978580 GTCCGGATCATCCCCTAACAT 59.021 52.381 7.81 0.00 31.13 2.71
5966 6751 2.028020 GTCCGGATCATCCCCTAACATC 60.028 54.545 7.81 0.00 31.13 3.06
5967 6752 2.158158 TCCGGATCATCCCCTAACATCT 60.158 50.000 0.00 0.00 31.13 2.90
5968 6753 3.076937 TCCGGATCATCCCCTAACATCTA 59.923 47.826 0.00 0.00 31.13 1.98
5969 6754 3.195825 CCGGATCATCCCCTAACATCTAC 59.804 52.174 0.00 0.00 31.13 2.59
5970 6755 3.832490 CGGATCATCCCCTAACATCTACA 59.168 47.826 0.00 0.00 31.13 2.74
5971 6756 4.283467 CGGATCATCCCCTAACATCTACAA 59.717 45.833 0.00 0.00 31.13 2.41
5972 6757 5.221641 CGGATCATCCCCTAACATCTACAAA 60.222 44.000 0.00 0.00 31.13 2.83
5973 6758 6.601332 GGATCATCCCCTAACATCTACAAAA 58.399 40.000 0.00 0.00 0.00 2.44
5974 6759 7.234355 GGATCATCCCCTAACATCTACAAAAT 58.766 38.462 0.00 0.00 0.00 1.82
5975 6760 8.383175 GGATCATCCCCTAACATCTACAAAATA 58.617 37.037 0.00 0.00 0.00 1.40
5976 6761 9.965902 GATCATCCCCTAACATCTACAAAATAT 57.034 33.333 0.00 0.00 0.00 1.28
5977 6762 9.965902 ATCATCCCCTAACATCTACAAAATATC 57.034 33.333 0.00 0.00 0.00 1.63
5978 6763 9.170890 TCATCCCCTAACATCTACAAAATATCT 57.829 33.333 0.00 0.00 0.00 1.98
5979 6764 9.442047 CATCCCCTAACATCTACAAAATATCTC 57.558 37.037 0.00 0.00 0.00 2.75
5980 6765 8.798975 TCCCCTAACATCTACAAAATATCTCT 57.201 34.615 0.00 0.00 0.00 3.10
5981 6766 8.651389 TCCCCTAACATCTACAAAATATCTCTG 58.349 37.037 0.00 0.00 0.00 3.35
5982 6767 7.880195 CCCCTAACATCTACAAAATATCTCTGG 59.120 40.741 0.00 0.00 0.00 3.86
5983 6768 7.389053 CCCTAACATCTACAAAATATCTCTGGC 59.611 40.741 0.00 0.00 0.00 4.85
5984 6769 8.153550 CCTAACATCTACAAAATATCTCTGGCT 58.846 37.037 0.00 0.00 0.00 4.75
5985 6770 9.553064 CTAACATCTACAAAATATCTCTGGCTT 57.447 33.333 0.00 0.00 0.00 4.35
5986 6771 8.443953 AACATCTACAAAATATCTCTGGCTTC 57.556 34.615 0.00 0.00 0.00 3.86
5987 6772 7.800092 ACATCTACAAAATATCTCTGGCTTCT 58.200 34.615 0.00 0.00 0.00 2.85
5988 6773 8.270744 ACATCTACAAAATATCTCTGGCTTCTT 58.729 33.333 0.00 0.00 0.00 2.52
5989 6774 9.770097 CATCTACAAAATATCTCTGGCTTCTTA 57.230 33.333 0.00 0.00 0.00 2.10
5994 6779 8.689972 ACAAAATATCTCTGGCTTCTTATTTGG 58.310 33.333 0.00 0.00 0.00 3.28
5995 6780 7.830099 AAATATCTCTGGCTTCTTATTTGGG 57.170 36.000 0.00 0.00 0.00 4.12
5996 6781 3.004752 TCTCTGGCTTCTTATTTGGGC 57.995 47.619 0.00 0.00 0.00 5.36
5997 6782 2.578021 TCTCTGGCTTCTTATTTGGGCT 59.422 45.455 0.00 0.00 0.00 5.19
5998 6783 3.010584 TCTCTGGCTTCTTATTTGGGCTT 59.989 43.478 0.00 0.00 0.00 4.35
5999 6784 3.356290 TCTGGCTTCTTATTTGGGCTTC 58.644 45.455 0.00 0.00 0.00 3.86
6000 6785 2.428530 CTGGCTTCTTATTTGGGCTTCC 59.571 50.000 0.00 0.00 0.00 3.46
6001 6786 1.757118 GGCTTCTTATTTGGGCTTCCC 59.243 52.381 0.00 0.00 45.71 3.97
6002 6787 2.624293 GGCTTCTTATTTGGGCTTCCCT 60.624 50.000 3.27 0.00 45.70 4.20
6003 6788 3.372675 GGCTTCTTATTTGGGCTTCCCTA 60.373 47.826 3.27 0.00 45.70 3.53
6004 6789 3.885901 GCTTCTTATTTGGGCTTCCCTAG 59.114 47.826 3.27 0.00 45.70 3.02
6017 6802 3.810386 GCTTCCCTAGCCTATTTTTCTCG 59.190 47.826 0.00 0.00 44.48 4.04
6018 6803 4.443034 GCTTCCCTAGCCTATTTTTCTCGA 60.443 45.833 0.00 0.00 44.48 4.04
6019 6804 4.667519 TCCCTAGCCTATTTTTCTCGAC 57.332 45.455 0.00 0.00 0.00 4.20
6020 6805 3.387050 TCCCTAGCCTATTTTTCTCGACC 59.613 47.826 0.00 0.00 0.00 4.79
6021 6806 3.381949 CCTAGCCTATTTTTCTCGACCG 58.618 50.000 0.00 0.00 0.00 4.79
6022 6807 1.653151 AGCCTATTTTTCTCGACCGC 58.347 50.000 0.00 0.00 0.00 5.68
6023 6808 0.656259 GCCTATTTTTCTCGACCGCC 59.344 55.000 0.00 0.00 0.00 6.13
6024 6809 1.296727 CCTATTTTTCTCGACCGCCC 58.703 55.000 0.00 0.00 0.00 6.13
6025 6810 0.928229 CTATTTTTCTCGACCGCCCG 59.072 55.000 0.00 0.00 0.00 6.13
6026 6811 0.531657 TATTTTTCTCGACCGCCCGA 59.468 50.000 0.00 0.00 37.03 5.14
6027 6812 0.107848 ATTTTTCTCGACCGCCCGAT 60.108 50.000 0.00 0.00 37.96 4.18
6028 6813 0.738412 TTTTTCTCGACCGCCCGATC 60.738 55.000 0.00 0.00 37.96 3.69
6029 6814 1.601419 TTTTCTCGACCGCCCGATCT 61.601 55.000 0.00 0.00 37.96 2.75
6030 6815 0.749091 TTTCTCGACCGCCCGATCTA 60.749 55.000 0.00 0.00 37.96 1.98
6031 6816 0.749091 TTCTCGACCGCCCGATCTAA 60.749 55.000 0.00 0.00 37.96 2.10
6032 6817 0.749091 TCTCGACCGCCCGATCTAAA 60.749 55.000 0.00 0.00 37.96 1.85
6033 6818 0.314302 CTCGACCGCCCGATCTAAAT 59.686 55.000 0.00 0.00 37.96 1.40
6034 6819 0.313043 TCGACCGCCCGATCTAAATC 59.687 55.000 0.00 0.00 33.14 2.17
6035 6820 0.031585 CGACCGCCCGATCTAAATCA 59.968 55.000 0.00 0.00 31.76 2.57
6036 6821 1.784525 GACCGCCCGATCTAAATCAG 58.215 55.000 0.00 0.00 31.76 2.90
6037 6822 1.340248 GACCGCCCGATCTAAATCAGA 59.660 52.381 0.00 0.00 37.79 3.27
6038 6823 1.341531 ACCGCCCGATCTAAATCAGAG 59.658 52.381 0.00 0.00 36.48 3.35
6039 6824 1.337260 CCGCCCGATCTAAATCAGAGG 60.337 57.143 0.00 0.00 36.48 3.69
6040 6825 1.337260 CGCCCGATCTAAATCAGAGGG 60.337 57.143 0.00 0.00 40.37 4.30
6041 6826 1.694696 GCCCGATCTAAATCAGAGGGT 59.305 52.381 0.00 0.00 39.82 4.34
6042 6827 2.289133 GCCCGATCTAAATCAGAGGGTC 60.289 54.545 0.00 0.00 39.82 4.46
6043 6828 2.300437 CCCGATCTAAATCAGAGGGTCC 59.700 54.545 0.00 0.00 35.08 4.46
6044 6829 2.965831 CCGATCTAAATCAGAGGGTCCA 59.034 50.000 0.00 0.00 36.48 4.02
6045 6830 3.388024 CCGATCTAAATCAGAGGGTCCAA 59.612 47.826 0.00 0.00 36.48 3.53
6046 6831 4.040952 CCGATCTAAATCAGAGGGTCCAAT 59.959 45.833 0.00 0.00 36.48 3.16
6047 6832 5.455326 CCGATCTAAATCAGAGGGTCCAATT 60.455 44.000 0.00 0.00 36.48 2.32
6048 6833 6.239600 CCGATCTAAATCAGAGGGTCCAATTA 60.240 42.308 0.00 0.00 36.48 1.40
6049 6834 6.870965 CGATCTAAATCAGAGGGTCCAATTAG 59.129 42.308 0.00 0.00 36.48 1.73
6050 6835 7.255977 CGATCTAAATCAGAGGGTCCAATTAGA 60.256 40.741 0.00 0.00 36.48 2.10
6051 6836 7.125792 TCTAAATCAGAGGGTCCAATTAGAC 57.874 40.000 0.00 0.00 35.95 2.59
6052 6837 7.202139 ATCTAAATCAGAGGGTCCAATTAGACC 60.202 40.741 14.07 14.07 44.45 3.85
6062 6847 5.431179 GTCCAATTAGACCTCTACCCAAA 57.569 43.478 0.00 0.00 0.00 3.28
6063 6848 5.812286 GTCCAATTAGACCTCTACCCAAAA 58.188 41.667 0.00 0.00 0.00 2.44
6064 6849 6.243148 GTCCAATTAGACCTCTACCCAAAAA 58.757 40.000 0.00 0.00 0.00 1.94
6065 6850 6.890268 GTCCAATTAGACCTCTACCCAAAAAT 59.110 38.462 0.00 0.00 0.00 1.82
6066 6851 7.067129 GTCCAATTAGACCTCTACCCAAAAATC 59.933 40.741 0.00 0.00 0.00 2.17
6067 6852 6.321435 CCAATTAGACCTCTACCCAAAAATCC 59.679 42.308 0.00 0.00 0.00 3.01
6068 6853 6.652205 ATTAGACCTCTACCCAAAAATCCA 57.348 37.500 0.00 0.00 0.00 3.41
6069 6854 4.302559 AGACCTCTACCCAAAAATCCAC 57.697 45.455 0.00 0.00 0.00 4.02
6070 6855 3.916989 AGACCTCTACCCAAAAATCCACT 59.083 43.478 0.00 0.00 0.00 4.00
6071 6856 4.354087 AGACCTCTACCCAAAAATCCACTT 59.646 41.667 0.00 0.00 0.00 3.16
6072 6857 4.407365 ACCTCTACCCAAAAATCCACTTG 58.593 43.478 0.00 0.00 0.00 3.16
6073 6858 3.193479 CCTCTACCCAAAAATCCACTTGC 59.807 47.826 0.00 0.00 0.00 4.01
6074 6859 4.082125 CTCTACCCAAAAATCCACTTGCT 58.918 43.478 0.00 0.00 0.00 3.91
6075 6860 5.249780 TCTACCCAAAAATCCACTTGCTA 57.750 39.130 0.00 0.00 0.00 3.49
6076 6861 5.826643 TCTACCCAAAAATCCACTTGCTAT 58.173 37.500 0.00 0.00 0.00 2.97
6077 6862 6.964464 TCTACCCAAAAATCCACTTGCTATA 58.036 36.000 0.00 0.00 0.00 1.31
6078 6863 7.582719 TCTACCCAAAAATCCACTTGCTATAT 58.417 34.615 0.00 0.00 0.00 0.86
6079 6864 8.719596 TCTACCCAAAAATCCACTTGCTATATA 58.280 33.333 0.00 0.00 0.00 0.86
6080 6865 9.349713 CTACCCAAAAATCCACTTGCTATATAA 57.650 33.333 0.00 0.00 0.00 0.98
6081 6866 8.602472 ACCCAAAAATCCACTTGCTATATAAA 57.398 30.769 0.00 0.00 0.00 1.40
6082 6867 8.695456 ACCCAAAAATCCACTTGCTATATAAAG 58.305 33.333 0.00 0.00 0.00 1.85
6083 6868 8.912988 CCCAAAAATCCACTTGCTATATAAAGA 58.087 33.333 1.92 0.00 0.00 2.52
6084 6869 9.736023 CCAAAAATCCACTTGCTATATAAAGAC 57.264 33.333 1.92 0.00 0.00 3.01
6085 6870 9.736023 CAAAAATCCACTTGCTATATAAAGACC 57.264 33.333 1.92 0.00 0.00 3.85
6086 6871 9.474313 AAAAATCCACTTGCTATATAAAGACCA 57.526 29.630 1.92 0.00 0.00 4.02
6087 6872 9.474313 AAAATCCACTTGCTATATAAAGACCAA 57.526 29.630 1.92 0.00 0.00 3.67
6088 6873 8.451908 AATCCACTTGCTATATAAAGACCAAC 57.548 34.615 1.92 0.00 0.00 3.77
6089 6874 6.354130 TCCACTTGCTATATAAAGACCAACC 58.646 40.000 1.92 0.00 0.00 3.77
6090 6875 5.531287 CCACTTGCTATATAAAGACCAACCC 59.469 44.000 1.92 0.00 0.00 4.11
6091 6876 6.357367 CACTTGCTATATAAAGACCAACCCT 58.643 40.000 1.92 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 58 4.089105 TGGACCACCATTTTCCGC 57.911 55.556 0.00 0.00 41.77 5.54
80 84 2.821366 GCTGTCAGCCGTCATGGG 60.821 66.667 14.27 0.00 38.63 4.00
134 138 2.286872 AGAAATGGAGCGCATCTCAAG 58.713 47.619 11.47 0.00 43.70 3.02
136 140 2.408271 AAGAAATGGAGCGCATCTCA 57.592 45.000 11.47 1.87 43.70 3.27
154 158 1.035923 TTGTGATGCCCGCAGAAAAA 58.964 45.000 0.00 0.00 36.53 1.94
155 159 1.035923 TTTGTGATGCCCGCAGAAAA 58.964 45.000 0.00 0.00 36.53 2.29
156 160 1.035923 TTTTGTGATGCCCGCAGAAA 58.964 45.000 0.00 0.00 36.53 2.52
157 161 1.035923 TTTTTGTGATGCCCGCAGAA 58.964 45.000 0.00 0.00 36.53 3.02
158 162 1.202114 GATTTTTGTGATGCCCGCAGA 59.798 47.619 0.00 0.00 36.53 4.26
159 163 1.067706 TGATTTTTGTGATGCCCGCAG 60.068 47.619 0.00 0.00 36.53 5.18
160 164 0.964700 TGATTTTTGTGATGCCCGCA 59.035 45.000 0.00 0.00 0.00 5.69
187 191 2.331098 CGCAACGCAACATGGTGT 59.669 55.556 13.35 0.00 0.00 4.16
257 267 1.329906 GTCAATCATTGCGAGGCAGAG 59.670 52.381 0.00 0.00 40.61 3.35
302 320 0.299300 GCGCGCATAACATTCGTACA 59.701 50.000 29.10 0.00 0.00 2.90
327 345 4.634004 TGTGTGCTATGTTTATGGCTGTAC 59.366 41.667 0.00 0.00 41.00 2.90
359 377 1.641577 GAGACTATGCCGTGTTCACC 58.358 55.000 0.00 0.00 0.00 4.02
484 523 7.177498 TCTAGTACTATTGCATTTGCGATTG 57.823 36.000 10.42 10.86 42.24 2.67
496 535 7.356540 CACAGAGGAACGATCTAGTACTATTG 58.643 42.308 2.33 0.00 0.00 1.90
521 563 8.519799 TCTCTCTCTCTCTCTTTTTCTAATCC 57.480 38.462 0.00 0.00 0.00 3.01
528 570 7.020827 TCTCTCTCTCTCTCTCTCTCTTTTT 57.979 40.000 0.00 0.00 0.00 1.94
574 623 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
575 624 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
577 626 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
578 627 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
579 628 6.418057 AATCTCTCTCTCTCTCTCTCTCTC 57.582 45.833 0.00 0.00 0.00 3.20
581 630 7.055667 TGTAATCTCTCTCTCTCTCTCTCTC 57.944 44.000 0.00 0.00 0.00 3.20
582 631 7.437713 TTGTAATCTCTCTCTCTCTCTCTCT 57.562 40.000 0.00 0.00 0.00 3.10
583 632 8.153550 AGATTGTAATCTCTCTCTCTCTCTCTC 58.846 40.741 1.35 0.00 41.82 3.20
584 633 7.935755 CAGATTGTAATCTCTCTCTCTCTCTCT 59.064 40.741 4.20 0.00 43.65 3.10
585 634 7.308229 GCAGATTGTAATCTCTCTCTCTCTCTC 60.308 44.444 4.20 0.00 43.65 3.20
586 635 6.488006 GCAGATTGTAATCTCTCTCTCTCTCT 59.512 42.308 4.20 0.00 43.65 3.10
587 636 6.488006 AGCAGATTGTAATCTCTCTCTCTCTC 59.512 42.308 4.20 0.00 43.65 3.20
614 759 8.439993 TTCCGGAATCAAATCAAACGATATAA 57.560 30.769 14.35 0.00 0.00 0.98
635 790 4.524318 ACGGTATGGCGCCTTCCG 62.524 66.667 35.94 35.94 45.53 4.30
646 801 1.553706 ACTCGTTCCTTCCACGGTAT 58.446 50.000 0.00 0.00 38.23 2.73
647 802 1.270550 GAACTCGTTCCTTCCACGGTA 59.729 52.381 0.00 0.00 38.23 4.02
648 803 0.033090 GAACTCGTTCCTTCCACGGT 59.967 55.000 0.00 0.00 38.23 4.83
649 804 1.007336 CGAACTCGTTCCTTCCACGG 61.007 60.000 4.36 0.00 38.23 4.94
661 823 2.027688 GCACCGTTTCTTATCGAACTCG 59.972 50.000 0.00 0.00 41.45 4.18
665 827 0.717224 GCGCACCGTTTCTTATCGAA 59.283 50.000 0.30 0.00 0.00 3.71
708 870 5.356882 TTGATTTGATTTGTCGTCTCCAC 57.643 39.130 0.00 0.00 0.00 4.02
749 916 0.387929 GATCGGACGGCACAGGATTA 59.612 55.000 0.00 0.00 0.00 1.75
758 925 4.267503 GAGACGGGATCGGACGGC 62.268 72.222 7.77 4.71 41.39 5.68
771 938 2.668280 GCTTGGCGACCGTTGAGAC 61.668 63.158 0.00 0.00 0.00 3.36
846 1019 2.363680 TGTGCCGGGCAATATTTATTGG 59.636 45.455 25.70 0.00 41.47 3.16
1570 1959 3.181520 CGAAGGTAAGAGCACGAAATTGG 60.182 47.826 0.00 0.00 0.00 3.16
1607 1996 5.123502 TCGTCTACTGGTCAACTTATGTCTC 59.876 44.000 0.00 0.00 0.00 3.36
1608 1997 5.008331 TCGTCTACTGGTCAACTTATGTCT 58.992 41.667 0.00 0.00 0.00 3.41
1616 2006 3.587797 TGGATTCGTCTACTGGTCAAC 57.412 47.619 0.00 0.00 0.00 3.18
1687 2077 3.904339 GTGCTCCTCCTTATCTCCCATAA 59.096 47.826 0.00 0.00 0.00 1.90
1694 2084 1.342819 GCATCGTGCTCCTCCTTATCT 59.657 52.381 3.20 0.00 40.96 1.98
1736 2126 1.510844 CAAAACGCTATGCCCACCC 59.489 57.895 0.00 0.00 0.00 4.61
1759 2155 2.917227 CCAAGCCACCAACCCACC 60.917 66.667 0.00 0.00 0.00 4.61
1828 2225 4.463891 ACTTTGGAGGATTTTGAATGCGAT 59.536 37.500 0.00 0.00 0.00 4.58
1837 2234 2.702270 AGCCCACTTTGGAGGATTTT 57.298 45.000 0.00 0.00 40.96 1.82
1890 2287 6.110411 AGTCCGAATCCAAGAAGTTTCTTA 57.890 37.500 6.79 0.00 45.23 2.10
1945 2343 6.280643 AGATTAGAAAAACAAAAGGCACACC 58.719 36.000 0.00 0.00 0.00 4.16
1978 2376 2.431057 AGTACCATCGTCTCCAACATCC 59.569 50.000 0.00 0.00 0.00 3.51
2095 2495 5.894807 ACTTCAAAAGATGTTGTTGACCAG 58.105 37.500 0.00 0.00 31.21 4.00
2394 2799 7.646314 CACTCTCAAGTCTGTGAAATGAAATT 58.354 34.615 0.00 0.00 32.54 1.82
2419 2824 3.564027 GTATGCGCTGTCACGGGC 61.564 66.667 9.73 2.48 42.51 6.13
2562 2978 5.989477 TCACCATCCTGGAAATTACTACTG 58.011 41.667 0.00 0.00 40.96 2.74
2563 2979 5.396884 GCTCACCATCCTGGAAATTACTACT 60.397 44.000 0.00 0.00 40.96 2.57
2564 2980 4.816925 GCTCACCATCCTGGAAATTACTAC 59.183 45.833 0.00 0.00 40.96 2.73
2565 2981 4.442893 CGCTCACCATCCTGGAAATTACTA 60.443 45.833 0.00 0.00 40.96 1.82
2566 2982 3.682718 CGCTCACCATCCTGGAAATTACT 60.683 47.826 0.00 0.00 40.96 2.24
2567 2983 2.614057 CGCTCACCATCCTGGAAATTAC 59.386 50.000 0.00 0.00 40.96 1.89
2568 2984 2.917933 CGCTCACCATCCTGGAAATTA 58.082 47.619 0.00 0.00 40.96 1.40
2612 3028 4.500205 CGAATCATCCCATGACCAATTTGG 60.500 45.833 14.02 14.02 43.01 3.28
2748 3171 2.617308 CACAAGGCAGGCAGATAGATTG 59.383 50.000 0.00 0.00 0.00 2.67
2749 3172 2.507058 TCACAAGGCAGGCAGATAGATT 59.493 45.455 0.00 0.00 0.00 2.40
2753 3176 2.040278 AGTTTCACAAGGCAGGCAGATA 59.960 45.455 0.00 0.00 0.00 1.98
2954 3377 3.692257 AGAAAGCCTATCATCCATCCG 57.308 47.619 0.00 0.00 0.00 4.18
3028 3451 4.993705 AGGGAGAAACATGTTGAAGGTA 57.006 40.909 12.82 0.00 0.00 3.08
3266 3810 2.936919 AAGATGGTCACTGCTGTCAA 57.063 45.000 0.00 0.00 0.00 3.18
3587 4131 5.807520 AGACACTAGACATTATCTTGCAACG 59.192 40.000 0.00 0.00 39.04 4.10
3589 4133 6.935167 TCAGACACTAGACATTATCTTGCAA 58.065 36.000 0.00 0.00 39.04 4.08
3627 4171 1.127343 GGAGACTGCCTTGGAGCTAT 58.873 55.000 0.00 0.00 0.00 2.97
3631 4175 3.320541 CAGTATAGGAGACTGCCTTGGAG 59.679 52.174 0.00 0.00 43.88 3.86
3938 4483 3.354089 AATCTTGGTCGCAAAACTGTG 57.646 42.857 0.00 0.00 0.00 3.66
4035 4580 0.739462 TGCGGATAAGCACCTTGACG 60.739 55.000 0.00 0.00 42.92 4.35
4248 4793 0.827368 GCGGGAAGATCTGAGGAAGT 59.173 55.000 0.00 0.00 0.00 3.01
4305 4850 3.927481 GAAGGCCAGGACAGGTGCC 62.927 68.421 5.01 0.00 44.35 5.01
4425 4970 1.813862 GCAAGTCCTACAAGCACACCA 60.814 52.381 0.00 0.00 0.00 4.17
4527 5072 5.126061 GCTGATAAACATGGACTTTGGTGAT 59.874 40.000 0.00 0.00 0.00 3.06
4623 5168 1.887242 GCCGCTTATGCCGATGTCA 60.887 57.895 0.00 0.00 35.36 3.58
4656 5201 2.237643 TCGGTACACAATGGCATAAGGT 59.762 45.455 0.00 1.60 0.00 3.50
4719 5264 2.549778 GCAGAGAGTCAGGCAGTTCTTT 60.550 50.000 0.00 0.00 0.00 2.52
4720 5265 1.001860 GCAGAGAGTCAGGCAGTTCTT 59.998 52.381 0.00 0.00 0.00 2.52
4968 5513 2.365105 GTCCAGATCCCGTCCCCA 60.365 66.667 0.00 0.00 0.00 4.96
5242 5798 3.185797 ACAGCTACAATCGTTTCGGAAAC 59.814 43.478 20.87 20.87 38.02 2.78
5317 5874 2.006888 GAAATGCGCTGCTACACCTAA 58.993 47.619 9.73 0.00 0.00 2.69
5320 5877 0.179189 GTGAAATGCGCTGCTACACC 60.179 55.000 9.73 0.00 0.00 4.16
5321 5878 0.516877 TGTGAAATGCGCTGCTACAC 59.483 50.000 9.73 12.87 0.00 2.90
5322 5879 1.452110 ATGTGAAATGCGCTGCTACA 58.548 45.000 9.73 8.21 0.00 2.74
5324 5881 3.244156 CAAAATGTGAAATGCGCTGCTA 58.756 40.909 9.73 0.00 0.00 3.49
5325 5882 2.063266 CAAAATGTGAAATGCGCTGCT 58.937 42.857 9.73 0.00 0.00 4.24
5364 5926 2.169352 AGCCTATCGAGCAGAACAACAT 59.831 45.455 0.00 0.00 0.00 2.71
5365 5927 1.550524 AGCCTATCGAGCAGAACAACA 59.449 47.619 0.00 0.00 0.00 3.33
5366 5928 1.929836 CAGCCTATCGAGCAGAACAAC 59.070 52.381 0.00 0.00 0.00 3.32
5367 5929 1.550524 ACAGCCTATCGAGCAGAACAA 59.449 47.619 0.00 0.00 0.00 2.83
5368 5930 1.134995 CACAGCCTATCGAGCAGAACA 60.135 52.381 0.00 0.00 0.00 3.18
5369 5931 1.135139 TCACAGCCTATCGAGCAGAAC 59.865 52.381 0.00 0.00 0.00 3.01
5370 5932 1.406898 CTCACAGCCTATCGAGCAGAA 59.593 52.381 0.00 0.00 0.00 3.02
5371 5933 1.028130 CTCACAGCCTATCGAGCAGA 58.972 55.000 0.00 0.00 0.00 4.26
5372 5934 0.743688 ACTCACAGCCTATCGAGCAG 59.256 55.000 0.00 0.00 0.00 4.24
5373 5935 1.134995 CAACTCACAGCCTATCGAGCA 60.135 52.381 0.00 0.00 0.00 4.26
5374 5936 1.134965 ACAACTCACAGCCTATCGAGC 60.135 52.381 0.00 0.00 0.00 5.03
5375 5937 2.164422 TCACAACTCACAGCCTATCGAG 59.836 50.000 0.00 0.00 0.00 4.04
5376 5938 2.094700 GTCACAACTCACAGCCTATCGA 60.095 50.000 0.00 0.00 0.00 3.59
5377 5939 2.263077 GTCACAACTCACAGCCTATCG 58.737 52.381 0.00 0.00 0.00 2.92
5378 5940 3.319137 TGTCACAACTCACAGCCTATC 57.681 47.619 0.00 0.00 0.00 2.08
5379 5941 3.008375 ACATGTCACAACTCACAGCCTAT 59.992 43.478 0.00 0.00 0.00 2.57
5380 5942 2.368548 ACATGTCACAACTCACAGCCTA 59.631 45.455 0.00 0.00 0.00 3.93
5381 5943 1.141657 ACATGTCACAACTCACAGCCT 59.858 47.619 0.00 0.00 0.00 4.58
5382 5944 1.597742 ACATGTCACAACTCACAGCC 58.402 50.000 0.00 0.00 0.00 4.85
5409 5972 4.153986 CAGATCGAACAGTTGCATTGTTC 58.846 43.478 24.13 24.13 46.82 3.18
5415 5978 2.621338 GATCCAGATCGAACAGTTGCA 58.379 47.619 0.00 0.00 0.00 4.08
5459 6022 3.659092 CGCAAGGCCGCAGTTTCA 61.659 61.111 0.00 0.00 0.00 2.69
5476 6039 3.242518 GCACTAAACGGCAATCTTTTCC 58.757 45.455 0.00 0.00 0.00 3.13
5477 6040 3.896122 TGCACTAAACGGCAATCTTTTC 58.104 40.909 0.00 0.00 37.03 2.29
5488 6051 4.491234 TTGGGTACAAATGCACTAAACG 57.509 40.909 0.00 0.00 32.66 3.60
5502 6065 1.611977 GGAGCTGGTGTTTTTGGGTAC 59.388 52.381 0.00 0.00 0.00 3.34
5505 6068 0.675633 CTGGAGCTGGTGTTTTTGGG 59.324 55.000 0.00 0.00 0.00 4.12
5526 6089 5.371176 TGGTATGTAAGCTTGGGGATCATAA 59.629 40.000 9.86 0.00 0.00 1.90
5533 6096 5.476945 GGATTTATGGTATGTAAGCTTGGGG 59.523 44.000 9.86 0.00 0.00 4.96
5543 6312 6.615726 AGGTAGACAGTGGATTTATGGTATGT 59.384 38.462 0.00 0.00 0.00 2.29
5544 6313 7.067496 AGGTAGACAGTGGATTTATGGTATG 57.933 40.000 0.00 0.00 0.00 2.39
5555 6324 7.453752 GGGATATTTATGTAGGTAGACAGTGGA 59.546 40.741 0.00 0.00 31.51 4.02
5556 6325 7.455008 AGGGATATTTATGTAGGTAGACAGTGG 59.545 40.741 0.00 0.00 31.51 4.00
5557 6326 8.423906 AGGGATATTTATGTAGGTAGACAGTG 57.576 38.462 0.00 0.00 31.51 3.66
5558 6327 8.232412 TGAGGGATATTTATGTAGGTAGACAGT 58.768 37.037 0.00 0.00 31.51 3.55
5568 6341 6.497259 GGAGGTCACTGAGGGATATTTATGTA 59.503 42.308 0.00 0.00 0.00 2.29
5598 6381 4.722700 CAACGGGGTCAGGGGCTG 62.723 72.222 0.00 0.00 0.00 4.85
5599 6382 4.974438 TCAACGGGGTCAGGGGCT 62.974 66.667 0.00 0.00 0.00 5.19
5600 6383 4.410400 CTCAACGGGGTCAGGGGC 62.410 72.222 0.00 0.00 0.00 5.80
5614 6397 1.567504 GCGGCTATTTTACGAGCTCA 58.432 50.000 15.40 0.00 38.79 4.26
5622 6405 1.812324 CGGGACATGGCGGCTATTTTA 60.812 52.381 11.43 0.00 0.00 1.52
5676 6461 0.178975 AAACATGGAAGGCGGTGGAA 60.179 50.000 0.00 0.00 0.00 3.53
5678 6463 0.038343 CAAAACATGGAAGGCGGTGG 60.038 55.000 0.00 0.00 0.00 4.61
5680 6465 1.665442 GCAAAACATGGAAGGCGGT 59.335 52.632 0.00 0.00 0.00 5.68
5681 6466 1.444212 CGCAAAACATGGAAGGCGG 60.444 57.895 13.85 0.00 40.70 6.13
5682 6467 4.151417 CGCAAAACATGGAAGGCG 57.849 55.556 9.12 9.12 38.45 5.52
5683 6468 0.667184 CCACGCAAAACATGGAAGGC 60.667 55.000 0.00 0.00 31.42 4.35
5684 6469 0.667184 GCCACGCAAAACATGGAAGG 60.667 55.000 0.00 0.00 31.42 3.46
5685 6470 0.667184 GGCCACGCAAAACATGGAAG 60.667 55.000 0.00 0.00 31.42 3.46
5686 6471 1.365633 GGCCACGCAAAACATGGAA 59.634 52.632 0.00 0.00 31.42 3.53
5687 6472 2.913765 CGGCCACGCAAAACATGGA 61.914 57.895 2.24 0.00 31.42 3.41
5688 6473 2.430582 CGGCCACGCAAAACATGG 60.431 61.111 2.24 0.00 33.62 3.66
5699 6484 4.322385 GAAACACACGGCGGCCAC 62.322 66.667 20.71 0.00 0.00 5.01
5700 6485 4.858680 TGAAACACACGGCGGCCA 62.859 61.111 20.71 0.00 0.00 5.36
5701 6486 2.414840 AAATGAAACACACGGCGGCC 62.415 55.000 13.24 9.54 0.00 6.13
5702 6487 1.007849 AAATGAAACACACGGCGGC 60.008 52.632 13.24 0.00 0.00 6.53
5703 6488 0.030101 ACAAATGAAACACACGGCGG 59.970 50.000 13.24 2.35 0.00 6.13
5704 6489 2.672188 TACAAATGAAACACACGGCG 57.328 45.000 4.80 4.80 0.00 6.46
5705 6490 3.896122 ACATACAAATGAAACACACGGC 58.104 40.909 0.00 0.00 36.54 5.68
5706 6491 4.148000 GCAACATACAAATGAAACACACGG 59.852 41.667 0.00 0.00 36.54 4.94
5707 6492 4.737279 TGCAACATACAAATGAAACACACG 59.263 37.500 0.00 0.00 36.54 4.49
5708 6493 6.768029 ATGCAACATACAAATGAAACACAC 57.232 33.333 0.00 0.00 36.54 3.82
5709 6494 7.493645 TGAAATGCAACATACAAATGAAACACA 59.506 29.630 0.00 0.00 36.54 3.72
5710 6495 7.849496 TGAAATGCAACATACAAATGAAACAC 58.151 30.769 0.00 0.00 36.54 3.32
5711 6496 8.604640 ATGAAATGCAACATACAAATGAAACA 57.395 26.923 0.00 0.00 36.54 2.83
5712 6497 8.710551 TGATGAAATGCAACATACAAATGAAAC 58.289 29.630 0.00 0.00 36.54 2.78
5713 6498 8.828688 TGATGAAATGCAACATACAAATGAAA 57.171 26.923 0.00 0.00 36.54 2.69
5715 6500 9.738832 CTATGATGAAATGCAACATACAAATGA 57.261 29.630 0.00 0.00 40.13 2.57
5716 6501 8.484799 GCTATGATGAAATGCAACATACAAATG 58.515 33.333 0.00 0.00 40.13 2.32
5717 6502 8.198778 TGCTATGATGAAATGCAACATACAAAT 58.801 29.630 0.00 0.00 40.13 2.32
5718 6503 7.545489 TGCTATGATGAAATGCAACATACAAA 58.455 30.769 0.00 0.00 40.13 2.83
5719 6504 7.098074 TGCTATGATGAAATGCAACATACAA 57.902 32.000 0.00 0.00 40.13 2.41
5720 6505 6.696441 TGCTATGATGAAATGCAACATACA 57.304 33.333 0.00 0.00 40.13 2.29
5721 6506 7.364970 TGATGCTATGATGAAATGCAACATAC 58.635 34.615 0.00 0.00 40.13 2.39
5722 6507 7.513371 TGATGCTATGATGAAATGCAACATA 57.487 32.000 0.00 0.00 40.13 2.29
5723 6508 6.399639 TGATGCTATGATGAAATGCAACAT 57.600 33.333 0.00 0.00 42.01 2.71
5724 6509 5.838531 TGATGCTATGATGAAATGCAACA 57.161 34.783 0.00 0.00 37.20 3.33
5725 6510 5.118664 GCATGATGCTATGATGAAATGCAAC 59.881 40.000 10.72 0.00 40.96 4.17
5726 6511 5.221342 TGCATGATGCTATGATGAAATGCAA 60.221 36.000 19.19 0.00 44.32 4.08
5727 6512 4.279671 TGCATGATGCTATGATGAAATGCA 59.720 37.500 19.19 3.06 45.31 3.96
5728 6513 4.805219 TGCATGATGCTATGATGAAATGC 58.195 39.130 19.19 0.00 45.31 3.56
5729 6514 9.023967 CAATATGCATGATGCTATGATGAAATG 57.976 33.333 19.19 4.21 45.31 2.32
5730 6515 7.706607 GCAATATGCATGATGCTATGATGAAAT 59.293 33.333 23.55 2.78 45.31 2.17
5731 6516 7.033185 GCAATATGCATGATGCTATGATGAAA 58.967 34.615 23.55 0.00 45.31 2.69
5732 6517 6.560711 GCAATATGCATGATGCTATGATGAA 58.439 36.000 23.55 0.00 45.31 2.57
5733 6518 6.131544 GCAATATGCATGATGCTATGATGA 57.868 37.500 23.55 0.00 45.31 2.92
5755 6540 6.956299 AACTTTATGAAAACATGCAGATGC 57.044 33.333 0.00 0.00 42.50 3.91
5756 6541 7.095565 TGCAAACTTTATGAAAACATGCAGATG 60.096 33.333 0.00 0.00 35.49 2.90
5757 6542 6.930164 TGCAAACTTTATGAAAACATGCAGAT 59.070 30.769 0.00 0.00 0.00 2.90
5758 6543 6.279123 TGCAAACTTTATGAAAACATGCAGA 58.721 32.000 0.00 0.00 0.00 4.26
5759 6544 6.528014 TGCAAACTTTATGAAAACATGCAG 57.472 33.333 0.00 0.00 0.00 4.41
5760 6545 6.147492 GGATGCAAACTTTATGAAAACATGCA 59.853 34.615 0.00 0.00 0.00 3.96
5761 6546 6.536688 GGATGCAAACTTTATGAAAACATGC 58.463 36.000 0.00 0.00 0.00 4.06
5762 6547 6.365789 ACGGATGCAAACTTTATGAAAACATG 59.634 34.615 0.00 0.00 0.00 3.21
5763 6548 6.454795 ACGGATGCAAACTTTATGAAAACAT 58.545 32.000 0.00 0.00 0.00 2.71
5764 6549 5.837437 ACGGATGCAAACTTTATGAAAACA 58.163 33.333 0.00 0.00 0.00 2.83
5765 6550 6.398517 CGAACGGATGCAAACTTTATGAAAAC 60.399 38.462 0.00 0.00 0.00 2.43
5766 6551 5.627367 CGAACGGATGCAAACTTTATGAAAA 59.373 36.000 0.00 0.00 0.00 2.29
5767 6552 5.150683 CGAACGGATGCAAACTTTATGAAA 58.849 37.500 0.00 0.00 0.00 2.69
5768 6553 4.214545 ACGAACGGATGCAAACTTTATGAA 59.785 37.500 0.00 0.00 0.00 2.57
5769 6554 3.749088 ACGAACGGATGCAAACTTTATGA 59.251 39.130 0.00 0.00 0.00 2.15
5770 6555 4.078363 ACGAACGGATGCAAACTTTATG 57.922 40.909 0.00 0.00 0.00 1.90
5771 6556 4.933400 ACTACGAACGGATGCAAACTTTAT 59.067 37.500 0.00 0.00 0.00 1.40
5772 6557 4.309099 ACTACGAACGGATGCAAACTTTA 58.691 39.130 0.00 0.00 0.00 1.85
5773 6558 3.135994 ACTACGAACGGATGCAAACTTT 58.864 40.909 0.00 0.00 0.00 2.66
5774 6559 2.762745 ACTACGAACGGATGCAAACTT 58.237 42.857 0.00 0.00 0.00 2.66
5775 6560 2.450609 ACTACGAACGGATGCAAACT 57.549 45.000 0.00 0.00 0.00 2.66
5776 6561 2.834689 CAACTACGAACGGATGCAAAC 58.165 47.619 0.00 0.00 0.00 2.93
5777 6562 1.195900 GCAACTACGAACGGATGCAAA 59.804 47.619 0.00 0.00 34.10 3.68
5778 6563 0.793861 GCAACTACGAACGGATGCAA 59.206 50.000 0.00 0.00 34.10 4.08
5779 6564 1.017177 GGCAACTACGAACGGATGCA 61.017 55.000 7.21 0.00 35.57 3.96
5780 6565 1.713830 GGCAACTACGAACGGATGC 59.286 57.895 0.00 0.00 0.00 3.91
5781 6566 1.995991 CGGCAACTACGAACGGATG 59.004 57.895 0.00 0.00 0.00 3.51
5782 6567 1.808390 GCGGCAACTACGAACGGAT 60.808 57.895 0.00 0.00 0.00 4.18
5783 6568 2.431260 GCGGCAACTACGAACGGA 60.431 61.111 0.00 0.00 0.00 4.69
5784 6569 3.834373 CGCGGCAACTACGAACGG 61.834 66.667 0.00 0.00 36.05 4.44
5785 6570 3.051171 GACGCGGCAACTACGAACG 62.051 63.158 7.34 0.00 37.50 3.95
5786 6571 2.723719 GGACGCGGCAACTACGAAC 61.724 63.158 17.00 0.00 37.50 3.95
5787 6572 2.431260 GGACGCGGCAACTACGAA 60.431 61.111 17.00 0.00 37.50 3.85
5788 6573 4.424566 GGGACGCGGCAACTACGA 62.425 66.667 17.00 0.00 37.50 3.43
5789 6574 3.055080 TAGGGACGCGGCAACTACG 62.055 63.158 17.00 0.00 39.41 3.51
5790 6575 1.517913 GTAGGGACGCGGCAACTAC 60.518 63.158 24.15 24.15 0.00 2.73
5791 6576 1.660560 GAGTAGGGACGCGGCAACTA 61.661 60.000 17.00 13.47 0.00 2.24
5792 6577 2.995574 AGTAGGGACGCGGCAACT 60.996 61.111 17.00 14.69 0.00 3.16
5793 6578 2.508663 GAGTAGGGACGCGGCAAC 60.509 66.667 17.00 9.02 0.00 4.17
5794 6579 4.124351 CGAGTAGGGACGCGGCAA 62.124 66.667 17.00 0.00 44.13 4.52
5800 6585 3.584052 CGGAGGCGAGTAGGGACG 61.584 72.222 0.00 0.00 0.00 4.79
5801 6586 2.050934 AACGGAGGCGAGTAGGGAC 61.051 63.158 0.00 0.00 0.00 4.46
5802 6587 2.050350 CAACGGAGGCGAGTAGGGA 61.050 63.158 0.00 0.00 0.00 4.20
5803 6588 2.050350 TCAACGGAGGCGAGTAGGG 61.050 63.158 0.00 0.00 0.00 3.53
5804 6589 1.139095 GTCAACGGAGGCGAGTAGG 59.861 63.158 0.00 0.00 0.00 3.18
5805 6590 1.139095 GGTCAACGGAGGCGAGTAG 59.861 63.158 0.00 0.00 0.00 2.57
5806 6591 0.896940 AAGGTCAACGGAGGCGAGTA 60.897 55.000 0.00 0.00 0.00 2.59
5807 6592 1.755393 AAAGGTCAACGGAGGCGAGT 61.755 55.000 0.00 0.00 0.00 4.18
5808 6593 1.004918 AAAGGTCAACGGAGGCGAG 60.005 57.895 0.00 0.00 0.00 5.03
5809 6594 1.005394 GAAAGGTCAACGGAGGCGA 60.005 57.895 0.00 0.00 0.00 5.54
5810 6595 1.004918 AGAAAGGTCAACGGAGGCG 60.005 57.895 0.00 0.00 0.00 5.52
5811 6596 0.034896 TGAGAAAGGTCAACGGAGGC 59.965 55.000 0.00 0.00 0.00 4.70
5812 6597 1.344763 ACTGAGAAAGGTCAACGGAGG 59.655 52.381 0.00 0.00 0.00 4.30
5813 6598 2.610727 GGACTGAGAAAGGTCAACGGAG 60.611 54.545 0.00 0.00 34.49 4.63
5814 6599 1.343465 GGACTGAGAAAGGTCAACGGA 59.657 52.381 0.00 0.00 34.49 4.69
5815 6600 1.070134 TGGACTGAGAAAGGTCAACGG 59.930 52.381 0.00 0.00 34.49 4.44
5816 6601 2.526304 TGGACTGAGAAAGGTCAACG 57.474 50.000 0.00 0.00 34.49 4.10
5817 6602 2.879026 GGTTGGACTGAGAAAGGTCAAC 59.121 50.000 0.00 0.00 39.82 3.18
5818 6603 2.484770 CGGTTGGACTGAGAAAGGTCAA 60.485 50.000 0.00 0.00 34.49 3.18
5819 6604 1.070134 CGGTTGGACTGAGAAAGGTCA 59.930 52.381 0.00 0.00 34.49 4.02
5820 6605 1.070289 ACGGTTGGACTGAGAAAGGTC 59.930 52.381 0.00 0.00 0.00 3.85
5821 6606 1.129058 ACGGTTGGACTGAGAAAGGT 58.871 50.000 0.00 0.00 0.00 3.50
5822 6607 2.143925 GAACGGTTGGACTGAGAAAGG 58.856 52.381 0.00 0.00 0.00 3.11
5823 6608 3.113260 AGAACGGTTGGACTGAGAAAG 57.887 47.619 0.00 0.00 0.00 2.62
5824 6609 3.553828 AAGAACGGTTGGACTGAGAAA 57.446 42.857 0.00 0.00 0.00 2.52
5825 6610 3.553828 AAAGAACGGTTGGACTGAGAA 57.446 42.857 0.00 0.00 0.00 2.87
5826 6611 3.202906 CAAAAGAACGGTTGGACTGAGA 58.797 45.455 0.00 0.00 0.00 3.27
5827 6612 2.943033 ACAAAAGAACGGTTGGACTGAG 59.057 45.455 0.00 0.00 0.00 3.35
5828 6613 2.993937 ACAAAAGAACGGTTGGACTGA 58.006 42.857 0.00 0.00 0.00 3.41
5829 6614 3.119637 ACAACAAAAGAACGGTTGGACTG 60.120 43.478 0.00 0.00 44.61 3.51
5830 6615 3.086282 ACAACAAAAGAACGGTTGGACT 58.914 40.909 0.00 0.00 44.61 3.85
5831 6616 3.431856 GACAACAAAAGAACGGTTGGAC 58.568 45.455 0.00 0.00 44.61 4.02
5832 6617 2.424246 GGACAACAAAAGAACGGTTGGA 59.576 45.455 0.00 0.00 44.61 3.53
5833 6618 2.793237 CGGACAACAAAAGAACGGTTGG 60.793 50.000 0.00 0.00 44.61 3.77
5834 6619 2.096174 TCGGACAACAAAAGAACGGTTG 59.904 45.455 0.00 0.00 45.52 3.77
5835 6620 2.096335 GTCGGACAACAAAAGAACGGTT 59.904 45.455 2.62 0.00 0.00 4.44
5836 6621 1.667212 GTCGGACAACAAAAGAACGGT 59.333 47.619 2.62 0.00 0.00 4.83
5837 6622 1.003223 GGTCGGACAACAAAAGAACGG 60.003 52.381 10.76 0.00 0.00 4.44
5838 6623 1.666700 TGGTCGGACAACAAAAGAACG 59.333 47.619 10.76 0.00 0.00 3.95
5839 6624 3.982576 ATGGTCGGACAACAAAAGAAC 57.017 42.857 10.76 0.00 0.00 3.01
5840 6625 4.399618 TCAAATGGTCGGACAACAAAAGAA 59.600 37.500 10.76 0.00 0.00 2.52
5841 6626 3.948473 TCAAATGGTCGGACAACAAAAGA 59.052 39.130 10.76 0.00 0.00 2.52
5842 6627 4.041723 GTCAAATGGTCGGACAACAAAAG 58.958 43.478 10.76 0.00 0.00 2.27
5843 6628 3.181485 GGTCAAATGGTCGGACAACAAAA 60.181 43.478 10.76 0.00 33.26 2.44
5844 6629 2.359531 GGTCAAATGGTCGGACAACAAA 59.640 45.455 10.76 0.00 33.26 2.83
5845 6630 1.950909 GGTCAAATGGTCGGACAACAA 59.049 47.619 10.76 0.00 33.26 2.83
5846 6631 1.600023 GGTCAAATGGTCGGACAACA 58.400 50.000 10.76 0.00 33.26 3.33
5847 6632 0.879090 GGGTCAAATGGTCGGACAAC 59.121 55.000 10.76 0.00 33.26 3.32
5848 6633 0.768622 AGGGTCAAATGGTCGGACAA 59.231 50.000 10.76 0.00 33.26 3.18
5849 6634 0.323629 GAGGGTCAAATGGTCGGACA 59.676 55.000 10.76 0.00 33.26 4.02
5850 6635 0.613777 AGAGGGTCAAATGGTCGGAC 59.386 55.000 0.00 0.00 0.00 4.79
5851 6636 0.902531 GAGAGGGTCAAATGGTCGGA 59.097 55.000 0.00 0.00 0.00 4.55
5852 6637 0.905357 AGAGAGGGTCAAATGGTCGG 59.095 55.000 0.00 0.00 0.00 4.79
5853 6638 2.009042 GCAGAGAGGGTCAAATGGTCG 61.009 57.143 0.00 0.00 0.00 4.79
5854 6639 1.003580 TGCAGAGAGGGTCAAATGGTC 59.996 52.381 0.00 0.00 0.00 4.02
5855 6640 1.067295 TGCAGAGAGGGTCAAATGGT 58.933 50.000 0.00 0.00 0.00 3.55
5856 6641 1.271543 TGTGCAGAGAGGGTCAAATGG 60.272 52.381 0.00 0.00 0.00 3.16
5857 6642 2.082231 CTGTGCAGAGAGGGTCAAATG 58.918 52.381 4.50 0.00 0.00 2.32
5858 6643 1.701847 ACTGTGCAGAGAGGGTCAAAT 59.298 47.619 19.13 0.00 0.00 2.32
5859 6644 1.131638 ACTGTGCAGAGAGGGTCAAA 58.868 50.000 19.13 0.00 0.00 2.69
5860 6645 0.394192 CACTGTGCAGAGAGGGTCAA 59.606 55.000 19.13 0.00 0.00 3.18
5861 6646 2.052779 CACTGTGCAGAGAGGGTCA 58.947 57.895 19.13 0.00 0.00 4.02
5862 6647 1.375268 GCACTGTGCAGAGAGGGTC 60.375 63.158 26.70 0.00 44.26 4.46
5863 6648 2.746359 GCACTGTGCAGAGAGGGT 59.254 61.111 26.70 0.00 44.26 4.34
5872 6657 2.980233 GGGGTCAGTGCACTGTGC 60.980 66.667 38.41 31.05 44.12 4.57
5873 6658 2.281761 GGGGGTCAGTGCACTGTG 60.282 66.667 38.41 21.36 44.12 3.66
5874 6659 2.448542 AGGGGGTCAGTGCACTGT 60.449 61.111 38.41 20.97 44.12 3.55
5875 6660 2.348998 GAGGGGGTCAGTGCACTG 59.651 66.667 36.07 36.07 45.08 3.66
5876 6661 3.314331 CGAGGGGGTCAGTGCACT 61.314 66.667 15.25 15.25 0.00 4.40
5903 6688 1.670083 CGGGTTCGGGACAACTTCC 60.670 63.158 0.00 0.00 45.00 3.46
5904 6689 0.947660 GTCGGGTTCGGGACAACTTC 60.948 60.000 0.00 0.00 36.95 3.01
5905 6690 1.070275 GTCGGGTTCGGGACAACTT 59.930 57.895 0.00 0.00 36.95 2.66
5906 6691 2.739132 GTCGGGTTCGGGACAACT 59.261 61.111 0.00 0.00 36.95 3.16
5907 6692 2.357881 GGTCGGGTTCGGGACAAC 60.358 66.667 0.00 0.00 34.87 3.32
5908 6693 3.628982 GGGTCGGGTTCGGGACAA 61.629 66.667 0.00 0.00 34.87 3.18
5914 6699 4.796231 CAGAGCGGGTCGGGTTCG 62.796 72.222 0.96 0.00 37.82 3.95
5915 6700 3.644399 GACAGAGCGGGTCGGGTTC 62.644 68.421 11.77 0.00 0.00 3.62
5916 6701 3.692406 GACAGAGCGGGTCGGGTT 61.692 66.667 11.77 0.00 0.00 4.11
5917 6702 4.988716 TGACAGAGCGGGTCGGGT 62.989 66.667 11.77 9.37 38.10 5.28
5918 6703 3.461773 ATGACAGAGCGGGTCGGG 61.462 66.667 11.77 6.36 38.10 5.14
5919 6704 2.202797 CATGACAGAGCGGGTCGG 60.203 66.667 5.80 5.80 38.10 4.79
5920 6705 1.517257 GTCATGACAGAGCGGGTCG 60.517 63.158 21.07 0.00 38.10 4.79
5921 6706 1.153549 GGTCATGACAGAGCGGGTC 60.154 63.158 26.47 0.00 35.83 4.46
5922 6707 1.480212 TTGGTCATGACAGAGCGGGT 61.480 55.000 26.47 0.00 38.81 5.28
5923 6708 0.107508 ATTGGTCATGACAGAGCGGG 60.108 55.000 26.47 0.00 38.81 6.13
5924 6709 1.012086 CATTGGTCATGACAGAGCGG 58.988 55.000 26.47 7.51 38.81 5.52
5925 6710 1.012086 CCATTGGTCATGACAGAGCG 58.988 55.000 26.47 10.70 38.81 5.03
5926 6711 1.340405 ACCCATTGGTCATGACAGAGC 60.340 52.381 26.47 10.26 43.06 4.09
5927 6712 2.795231 ACCCATTGGTCATGACAGAG 57.205 50.000 26.47 12.89 43.06 3.35
5938 6723 0.250901 GGATGATCCGGACCCATTGG 60.251 60.000 18.79 0.00 37.80 3.16
5939 6724 0.250901 GGGATGATCCGGACCCATTG 60.251 60.000 20.42 0.00 41.72 2.82
5940 6725 1.427072 GGGGATGATCCGGACCCATT 61.427 60.000 25.06 1.91 43.67 3.16
5941 6726 1.847968 GGGGATGATCCGGACCCAT 60.848 63.158 25.06 21.61 43.67 4.00
5942 6727 1.670925 TAGGGGATGATCCGGACCCA 61.671 60.000 25.06 18.22 43.96 4.51
5943 6728 0.473117 TTAGGGGATGATCCGGACCC 60.473 60.000 17.77 17.77 37.43 4.46
5944 6729 0.685660 GTTAGGGGATGATCCGGACC 59.314 60.000 6.12 2.47 37.43 4.46
5945 6730 1.420430 TGTTAGGGGATGATCCGGAC 58.580 55.000 6.12 0.90 37.43 4.79
5946 6731 2.158158 AGATGTTAGGGGATGATCCGGA 60.158 50.000 6.61 6.61 37.43 5.14
5947 6732 2.260822 AGATGTTAGGGGATGATCCGG 58.739 52.381 5.22 0.00 37.43 5.14
5948 6733 3.832490 TGTAGATGTTAGGGGATGATCCG 59.168 47.826 5.22 0.00 37.43 4.18
5949 6734 5.825593 TTGTAGATGTTAGGGGATGATCC 57.174 43.478 1.94 1.94 35.23 3.36
5950 6735 9.965902 ATATTTTGTAGATGTTAGGGGATGATC 57.034 33.333 0.00 0.00 0.00 2.92
5951 6736 9.965902 GATATTTTGTAGATGTTAGGGGATGAT 57.034 33.333 0.00 0.00 0.00 2.45
5952 6737 9.170890 AGATATTTTGTAGATGTTAGGGGATGA 57.829 33.333 0.00 0.00 0.00 2.92
5953 6738 9.442047 GAGATATTTTGTAGATGTTAGGGGATG 57.558 37.037 0.00 0.00 0.00 3.51
5954 6739 9.398921 AGAGATATTTTGTAGATGTTAGGGGAT 57.601 33.333 0.00 0.00 0.00 3.85
5955 6740 8.651389 CAGAGATATTTTGTAGATGTTAGGGGA 58.349 37.037 0.00 0.00 0.00 4.81
5956 6741 7.880195 CCAGAGATATTTTGTAGATGTTAGGGG 59.120 40.741 0.00 0.00 0.00 4.79
5957 6742 7.389053 GCCAGAGATATTTTGTAGATGTTAGGG 59.611 40.741 0.00 0.00 0.00 3.53
5958 6743 8.153550 AGCCAGAGATATTTTGTAGATGTTAGG 58.846 37.037 0.00 0.00 0.00 2.69
5959 6744 9.553064 AAGCCAGAGATATTTTGTAGATGTTAG 57.447 33.333 0.00 0.00 0.00 2.34
5960 6745 9.547753 GAAGCCAGAGATATTTTGTAGATGTTA 57.452 33.333 0.00 0.00 0.00 2.41
5961 6746 8.270744 AGAAGCCAGAGATATTTTGTAGATGTT 58.729 33.333 0.00 0.00 0.00 2.71
5962 6747 7.800092 AGAAGCCAGAGATATTTTGTAGATGT 58.200 34.615 0.00 0.00 0.00 3.06
5963 6748 8.674263 AAGAAGCCAGAGATATTTTGTAGATG 57.326 34.615 0.00 0.00 0.00 2.90
5968 6753 8.689972 CCAAATAAGAAGCCAGAGATATTTTGT 58.310 33.333 0.00 0.00 0.00 2.83
5969 6754 8.139989 CCCAAATAAGAAGCCAGAGATATTTTG 58.860 37.037 0.00 0.00 0.00 2.44
5970 6755 7.201947 GCCCAAATAAGAAGCCAGAGATATTTT 60.202 37.037 0.00 0.00 0.00 1.82
5971 6756 6.266330 GCCCAAATAAGAAGCCAGAGATATTT 59.734 38.462 0.00 0.00 0.00 1.40
5972 6757 5.772169 GCCCAAATAAGAAGCCAGAGATATT 59.228 40.000 0.00 0.00 0.00 1.28
5973 6758 5.074239 AGCCCAAATAAGAAGCCAGAGATAT 59.926 40.000 0.00 0.00 0.00 1.63
5974 6759 4.413520 AGCCCAAATAAGAAGCCAGAGATA 59.586 41.667 0.00 0.00 0.00 1.98
5975 6760 3.203934 AGCCCAAATAAGAAGCCAGAGAT 59.796 43.478 0.00 0.00 0.00 2.75
5976 6761 2.578021 AGCCCAAATAAGAAGCCAGAGA 59.422 45.455 0.00 0.00 0.00 3.10
5977 6762 3.010200 AGCCCAAATAAGAAGCCAGAG 57.990 47.619 0.00 0.00 0.00 3.35
5978 6763 3.356290 GAAGCCCAAATAAGAAGCCAGA 58.644 45.455 0.00 0.00 0.00 3.86
5979 6764 2.428530 GGAAGCCCAAATAAGAAGCCAG 59.571 50.000 0.00 0.00 0.00 4.85
5980 6765 2.456577 GGAAGCCCAAATAAGAAGCCA 58.543 47.619 0.00 0.00 0.00 4.75
5981 6766 1.757118 GGGAAGCCCAAATAAGAAGCC 59.243 52.381 0.00 0.00 44.65 4.35
5996 6781 5.051153 GTCGAGAAAAATAGGCTAGGGAAG 58.949 45.833 0.00 0.00 0.00 3.46
5997 6782 4.141779 GGTCGAGAAAAATAGGCTAGGGAA 60.142 45.833 0.00 0.00 0.00 3.97
5998 6783 3.387050 GGTCGAGAAAAATAGGCTAGGGA 59.613 47.826 0.00 0.00 0.00 4.20
5999 6784 3.729966 GGTCGAGAAAAATAGGCTAGGG 58.270 50.000 0.00 0.00 0.00 3.53
6000 6785 3.381949 CGGTCGAGAAAAATAGGCTAGG 58.618 50.000 0.00 0.00 0.00 3.02
6001 6786 2.795470 GCGGTCGAGAAAAATAGGCTAG 59.205 50.000 0.00 0.00 0.00 3.42
6002 6787 2.482490 GGCGGTCGAGAAAAATAGGCTA 60.482 50.000 0.00 0.00 0.00 3.93
6003 6788 1.653151 GCGGTCGAGAAAAATAGGCT 58.347 50.000 0.00 0.00 0.00 4.58
6004 6789 0.656259 GGCGGTCGAGAAAAATAGGC 59.344 55.000 0.00 0.00 0.00 3.93
6005 6790 1.296727 GGGCGGTCGAGAAAAATAGG 58.703 55.000 0.00 0.00 0.00 2.57
6006 6791 0.928229 CGGGCGGTCGAGAAAAATAG 59.072 55.000 0.00 0.00 0.00 1.73
6007 6792 0.531657 TCGGGCGGTCGAGAAAAATA 59.468 50.000 0.00 0.00 34.82 1.40
6008 6793 0.107848 ATCGGGCGGTCGAGAAAAAT 60.108 50.000 0.00 0.00 42.69 1.82
6009 6794 0.738412 GATCGGGCGGTCGAGAAAAA 60.738 55.000 0.00 0.00 42.69 1.94
6010 6795 1.153706 GATCGGGCGGTCGAGAAAA 60.154 57.895 0.00 0.00 42.69 2.29
6011 6796 0.749091 TAGATCGGGCGGTCGAGAAA 60.749 55.000 0.00 0.00 42.69 2.52
6012 6797 0.749091 TTAGATCGGGCGGTCGAGAA 60.749 55.000 0.00 0.00 42.69 2.87
6013 6798 0.749091 TTTAGATCGGGCGGTCGAGA 60.749 55.000 0.00 0.00 42.69 4.04
6014 6799 0.314302 ATTTAGATCGGGCGGTCGAG 59.686 55.000 0.00 0.00 42.69 4.04
6015 6800 0.313043 GATTTAGATCGGGCGGTCGA 59.687 55.000 0.00 0.00 43.61 4.20
6016 6801 0.031585 TGATTTAGATCGGGCGGTCG 59.968 55.000 0.00 0.00 34.91 4.79
6017 6802 1.340248 TCTGATTTAGATCGGGCGGTC 59.660 52.381 2.43 0.00 38.87 4.79
6018 6803 1.341531 CTCTGATTTAGATCGGGCGGT 59.658 52.381 2.43 0.00 38.87 5.68
6019 6804 1.337260 CCTCTGATTTAGATCGGGCGG 60.337 57.143 2.43 0.77 38.87 6.13
6020 6805 1.337260 CCCTCTGATTTAGATCGGGCG 60.337 57.143 2.43 0.00 38.87 6.13
6021 6806 1.694696 ACCCTCTGATTTAGATCGGGC 59.305 52.381 2.43 0.00 42.19 6.13
6022 6807 2.300437 GGACCCTCTGATTTAGATCGGG 59.700 54.545 2.43 3.23 43.42 5.14
6023 6808 2.965831 TGGACCCTCTGATTTAGATCGG 59.034 50.000 0.00 0.00 39.57 4.18
6024 6809 4.672587 TTGGACCCTCTGATTTAGATCG 57.327 45.455 0.00 0.00 34.21 3.69
6025 6810 7.875554 GTCTAATTGGACCCTCTGATTTAGATC 59.124 40.741 10.68 0.00 34.21 2.75
6026 6811 7.740805 GTCTAATTGGACCCTCTGATTTAGAT 58.259 38.462 10.68 0.00 34.21 1.98
6027 6812 7.125792 GTCTAATTGGACCCTCTGATTTAGA 57.874 40.000 10.68 0.00 0.00 2.10
6040 6825 5.431179 TTTGGGTAGAGGTCTAATTGGAC 57.569 43.478 13.21 13.21 35.66 4.02
6041 6826 6.457159 TTTTTGGGTAGAGGTCTAATTGGA 57.543 37.500 0.00 0.00 0.00 3.53
6042 6827 6.321435 GGATTTTTGGGTAGAGGTCTAATTGG 59.679 42.308 0.00 0.00 0.00 3.16
6043 6828 6.889722 TGGATTTTTGGGTAGAGGTCTAATTG 59.110 38.462 0.00 0.00 0.00 2.32
6044 6829 6.890268 GTGGATTTTTGGGTAGAGGTCTAATT 59.110 38.462 0.00 0.00 0.00 1.40
6045 6830 6.217693 AGTGGATTTTTGGGTAGAGGTCTAAT 59.782 38.462 0.00 0.00 0.00 1.73
6046 6831 5.550403 AGTGGATTTTTGGGTAGAGGTCTAA 59.450 40.000 0.00 0.00 0.00 2.10
6047 6832 5.098663 AGTGGATTTTTGGGTAGAGGTCTA 58.901 41.667 0.00 0.00 0.00 2.59
6048 6833 3.916989 AGTGGATTTTTGGGTAGAGGTCT 59.083 43.478 0.00 0.00 0.00 3.85
6049 6834 4.302559 AGTGGATTTTTGGGTAGAGGTC 57.697 45.455 0.00 0.00 0.00 3.85
6050 6835 4.407365 CAAGTGGATTTTTGGGTAGAGGT 58.593 43.478 0.00 0.00 0.00 3.85
6051 6836 3.193479 GCAAGTGGATTTTTGGGTAGAGG 59.807 47.826 0.00 0.00 0.00 3.69
6052 6837 4.082125 AGCAAGTGGATTTTTGGGTAGAG 58.918 43.478 0.00 0.00 0.00 2.43
6053 6838 4.112634 AGCAAGTGGATTTTTGGGTAGA 57.887 40.909 0.00 0.00 0.00 2.59
6054 6839 7.823745 ATATAGCAAGTGGATTTTTGGGTAG 57.176 36.000 0.00 0.00 0.00 3.18
6055 6840 9.702253 TTTATATAGCAAGTGGATTTTTGGGTA 57.298 29.630 0.00 0.00 0.00 3.69
6056 6841 8.602472 TTTATATAGCAAGTGGATTTTTGGGT 57.398 30.769 0.00 0.00 0.00 4.51
6057 6842 8.912988 TCTTTATATAGCAAGTGGATTTTTGGG 58.087 33.333 0.00 0.00 0.00 4.12
6058 6843 9.736023 GTCTTTATATAGCAAGTGGATTTTTGG 57.264 33.333 0.00 0.00 0.00 3.28
6059 6844 9.736023 GGTCTTTATATAGCAAGTGGATTTTTG 57.264 33.333 0.00 0.00 0.00 2.44
6060 6845 9.474313 TGGTCTTTATATAGCAAGTGGATTTTT 57.526 29.630 0.00 0.00 0.00 1.94
6061 6846 9.474313 TTGGTCTTTATATAGCAAGTGGATTTT 57.526 29.630 0.00 0.00 0.00 1.82
6062 6847 8.903820 GTTGGTCTTTATATAGCAAGTGGATTT 58.096 33.333 0.00 0.00 34.08 2.17
6063 6848 7.502561 GGTTGGTCTTTATATAGCAAGTGGATT 59.497 37.037 0.00 0.00 34.08 3.01
6064 6849 6.998673 GGTTGGTCTTTATATAGCAAGTGGAT 59.001 38.462 0.00 0.00 34.08 3.41
6065 6850 6.354130 GGTTGGTCTTTATATAGCAAGTGGA 58.646 40.000 0.00 0.00 34.08 4.02
6066 6851 5.531287 GGGTTGGTCTTTATATAGCAAGTGG 59.469 44.000 0.00 0.00 34.08 4.00
6067 6852 6.357367 AGGGTTGGTCTTTATATAGCAAGTG 58.643 40.000 0.00 0.00 34.08 3.16
6068 6853 6.576778 AGGGTTGGTCTTTATATAGCAAGT 57.423 37.500 0.00 0.00 34.08 3.16



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.