Multiple sequence alignment - TraesCS6D01G212000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G212000 chr6D 100.000 7054 0 0 1 7054 299196729 299189676 0.000000e+00 13027.0
1 TraesCS6D01G212000 chr6A 93.832 2594 121 23 2660 5240 420089421 420091988 0.000000e+00 3868.0
2 TraesCS6D01G212000 chr6A 93.866 2054 81 17 457 2497 420087388 420089409 0.000000e+00 3053.0
3 TraesCS6D01G212000 chr6A 89.991 1129 36 25 5527 6646 420092106 420093166 0.000000e+00 1387.0
4 TraesCS6D01G212000 chr6A 92.250 400 26 4 6655 7054 420093209 420093603 4.780000e-156 562.0
5 TraesCS6D01G212000 chr6A 88.000 175 17 4 274 444 378196008 378196182 3.340000e-48 204.0
6 TraesCS6D01G212000 chr6A 89.308 159 15 2 288 444 606036653 606036495 1.550000e-46 198.0
7 TraesCS6D01G212000 chr6A 86.471 170 21 2 277 444 393520662 393520493 1.210000e-42 185.0
8 TraesCS6D01G212000 chr6A 98.039 51 1 0 5465 5515 420092072 420092122 9.750000e-14 89.8
9 TraesCS6D01G212000 chr6B 91.823 1443 99 13 3879 5309 462159455 462158020 0.000000e+00 1993.0
10 TraesCS6D01G212000 chr6B 92.659 1226 81 5 2659 3882 462160935 462159717 0.000000e+00 1757.0
11 TraesCS6D01G212000 chr6B 89.371 1129 76 23 773 1879 462162824 462161718 0.000000e+00 1380.0
12 TraesCS6D01G212000 chr6B 90.846 1016 50 22 5639 6620 462157750 462156744 0.000000e+00 1321.0
13 TraesCS6D01G212000 chr6B 93.192 661 23 10 1878 2525 462161595 462160944 0.000000e+00 952.0
14 TraesCS6D01G212000 chr6B 95.122 205 8 1 6819 7023 462155419 462155217 8.830000e-84 322.0
15 TraesCS6D01G212000 chr6B 96.875 192 6 0 6621 6812 462155930 462155739 8.830000e-84 322.0
16 TraesCS6D01G212000 chr6B 91.176 170 13 2 277 444 260118549 260118380 5.500000e-56 230.0
17 TraesCS6D01G212000 chr3D 99.231 130 1 0 2524 2653 250932432 250932561 1.180000e-57 235.0
18 TraesCS6D01G212000 chr3D 90.968 155 10 3 2510 2662 54216045 54216197 9.280000e-49 206.0
19 TraesCS6D01G212000 chr3D 98.837 86 1 0 5382 5467 22679145 22679060 3.410000e-33 154.0
20 TraesCS6D01G212000 chr7A 91.176 170 13 2 277 444 31115389 31115558 5.500000e-56 230.0
21 TraesCS6D01G212000 chr1B 91.071 168 13 2 277 442 108867387 108867554 7.120000e-55 226.0
22 TraesCS6D01G212000 chr1B 88.571 175 16 4 274 444 316237881 316237707 7.170000e-50 209.0
23 TraesCS6D01G212000 chr1B 91.333 150 13 0 2501 2650 102627704 102627853 9.280000e-49 206.0
24 TraesCS6D01G212000 chr1B 98.864 88 1 0 5383 5470 510799178 510799091 2.630000e-34 158.0
25 TraesCS6D01G212000 chr1D 97.710 131 2 1 2520 2650 311357008 311356879 2.560000e-54 224.0
26 TraesCS6D01G212000 chr7D 96.970 132 4 0 2523 2654 501505681 501505812 9.210000e-54 222.0
27 TraesCS6D01G212000 chr7D 97.656 128 2 1 2523 2650 501787718 501787592 1.190000e-52 219.0
28 TraesCS6D01G212000 chr7D 88.571 175 16 4 274 444 283457558 283457732 7.170000e-50 209.0
29 TraesCS6D01G212000 chr7B 90.476 168 15 1 277 443 690903975 690904142 3.310000e-53 220.0
30 TraesCS6D01G212000 chr7B 96.809 94 3 0 5382 5475 639796284 639796191 2.630000e-34 158.0
31 TraesCS6D01G212000 chr2D 96.970 132 3 1 2520 2651 450745506 450745636 3.310000e-53 220.0
32 TraesCS6D01G212000 chr5B 96.183 131 5 0 2523 2653 96879070 96878940 1.540000e-51 215.0
33 TraesCS6D01G212000 chr5D 94.245 139 6 2 2517 2655 55850475 55850611 1.990000e-50 211.0
34 TraesCS6D01G212000 chr5D 96.774 93 3 0 5379 5471 520110272 520110180 9.470000e-34 156.0
35 TraesCS6D01G212000 chr4B 95.699 93 4 0 5375 5467 124050026 124049934 4.410000e-32 150.0
36 TraesCS6D01G212000 chr4B 89.565 115 7 5 5371 5484 127852614 127852724 2.650000e-29 141.0
37 TraesCS6D01G212000 chr4A 97.674 86 2 0 5382 5467 9380760 9380675 1.590000e-31 148.0
38 TraesCS6D01G212000 chrUn 90.826 109 8 2 5377 5485 29029196 29029302 2.050000e-30 145.0
39 TraesCS6D01G212000 chrUn 89.908 109 9 2 5377 5485 28955430 28955536 9.540000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G212000 chr6D 299189676 299196729 7053 True 13027.000000 13027 100.000000 1 7054 1 chr6D.!!$R1 7053
1 TraesCS6D01G212000 chr6A 420087388 420093603 6215 False 1791.960000 3868 93.595600 457 7054 5 chr6A.!!$F2 6597
2 TraesCS6D01G212000 chr6B 462155217 462162824 7607 True 1149.571429 1993 92.841143 773 7023 7 chr6B.!!$R2 6250

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
580 581 0.179145 AGCACCGACCGATTTCTACG 60.179 55.0 0.00 0.00 0.00 3.51 F
1169 1184 0.110056 TGTCTCCGTTCGCGTTAGTC 60.110 55.0 5.77 0.00 39.32 2.59 F
1986 2148 0.251165 GGGTTGCCCAAGTAAGCTCA 60.251 55.0 0.00 0.00 44.65 4.26 F
2646 2824 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 F
2649 2827 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.0 13.64 0.00 46.06 2.59 F
2654 2832 0.107508 CGGACGGAGGGAGTAGTACA 60.108 60.0 2.52 0.00 0.00 2.90 F
3519 3700 0.458260 GCCTCTCTTCTCCTTCCGAC 59.542 60.0 0.00 0.00 0.00 4.79 F
3787 3968 0.695924 TTCAAGATTCGGGGGCTGAA 59.304 50.0 0.00 0.00 33.01 3.02 F
4163 4616 0.753262 TCTCCGCTCCCTTTATCTGC 59.247 55.0 0.00 0.00 0.00 4.26 F
5333 5798 0.930310 CGATCCATGTCGCGACAATT 59.070 50.0 41.74 26.41 45.41 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1488 1510 0.107508 ACACAGCATATCAAGCGGCT 60.108 50.000 0.00 0.0 36.99 5.52 R
2627 2805 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.0 44.66 2.12 R
3625 3806 0.742505 CCGACCTCCGTATTGCACTA 59.257 55.000 0.00 0.0 36.31 2.74 R
4163 4616 0.168128 GGGCATCACGGAAAAACTCG 59.832 55.000 0.00 0.0 0.00 4.18 R
4204 4657 3.869912 GCATCACAGAGGAGCAGGTAAAA 60.870 47.826 0.00 0.0 0.00 1.52 R
4542 4997 5.098893 CCTCGACATTCTCAGTCTACAAAG 58.901 45.833 0.00 0.0 33.89 2.77 R
4967 5430 2.238646 AGTGCCCGTTCCTTGATGAATA 59.761 45.455 0.00 0.0 0.00 1.75 R
5776 6275 0.178981 ACCAAGCATGCACCTGTCTT 60.179 50.000 21.98 0.0 0.00 3.01 R
5948 6447 0.813210 CCTCGATGCTCTTCCCTTGC 60.813 60.000 0.00 0.0 0.00 4.01 R
6777 8157 0.663153 GGGATACGTGAATTGCCAGC 59.337 55.000 0.00 0.0 37.60 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.603298 CTTTTCCGTGAAATACCTTAGTAAAAC 57.397 33.333 0.81 0.00 31.34 2.43
27 28 8.674263 TTTCCGTGAAATACCTTAGTAAAACA 57.326 30.769 0.00 0.00 30.59 2.83
28 29 7.894376 TCCGTGAAATACCTTAGTAAAACAG 57.106 36.000 0.00 0.00 30.59 3.16
29 30 6.875195 TCCGTGAAATACCTTAGTAAAACAGG 59.125 38.462 0.00 0.00 30.59 4.00
30 31 6.093082 CCGTGAAATACCTTAGTAAAACAGGG 59.907 42.308 0.00 0.00 32.77 4.45
31 32 6.093082 CGTGAAATACCTTAGTAAAACAGGGG 59.907 42.308 0.00 0.00 31.19 4.79
32 33 6.376299 GTGAAATACCTTAGTAAAACAGGGGG 59.624 42.308 0.00 0.00 31.19 5.40
33 34 6.275144 TGAAATACCTTAGTAAAACAGGGGGA 59.725 38.462 0.00 0.00 31.19 4.81
34 35 6.723471 AATACCTTAGTAAAACAGGGGGAA 57.277 37.500 0.00 0.00 31.19 3.97
35 36 6.723471 ATACCTTAGTAAAACAGGGGGAAA 57.277 37.500 0.00 0.00 31.19 3.13
36 37 4.994282 ACCTTAGTAAAACAGGGGGAAAG 58.006 43.478 0.00 0.00 31.19 2.62
37 38 4.666431 ACCTTAGTAAAACAGGGGGAAAGA 59.334 41.667 0.00 0.00 31.19 2.52
38 39 5.008331 CCTTAGTAAAACAGGGGGAAAGAC 58.992 45.833 0.00 0.00 0.00 3.01
39 40 3.520691 AGTAAAACAGGGGGAAAGACC 57.479 47.619 0.00 0.00 38.08 3.85
53 54 5.529581 GGAAAGACCCAGAAAAATGTTGA 57.470 39.130 0.00 0.00 0.00 3.18
54 55 5.912892 GGAAAGACCCAGAAAAATGTTGAA 58.087 37.500 0.00 0.00 0.00 2.69
55 56 6.345298 GGAAAGACCCAGAAAAATGTTGAAA 58.655 36.000 0.00 0.00 0.00 2.69
56 57 6.821160 GGAAAGACCCAGAAAAATGTTGAAAA 59.179 34.615 0.00 0.00 0.00 2.29
57 58 7.498900 GGAAAGACCCAGAAAAATGTTGAAAAT 59.501 33.333 0.00 0.00 0.00 1.82
58 59 8.806429 AAAGACCCAGAAAAATGTTGAAAATT 57.194 26.923 0.00 0.00 0.00 1.82
59 60 8.806429 AAGACCCAGAAAAATGTTGAAAATTT 57.194 26.923 0.00 0.00 0.00 1.82
60 61 8.806429 AGACCCAGAAAAATGTTGAAAATTTT 57.194 26.923 2.28 2.28 38.54 1.82
61 62 9.898152 AGACCCAGAAAAATGTTGAAAATTTTA 57.102 25.926 6.50 0.00 36.46 1.52
74 75 9.809096 TGTTGAAAATTTTAAGTGCTTACATCA 57.191 25.926 2.75 0.00 0.00 3.07
87 88 8.177119 AGTGCTTACATCATTAAAACTTTCCA 57.823 30.769 0.00 0.00 0.00 3.53
88 89 8.806146 AGTGCTTACATCATTAAAACTTTCCAT 58.194 29.630 0.00 0.00 0.00 3.41
89 90 9.076596 GTGCTTACATCATTAAAACTTTCCATC 57.923 33.333 0.00 0.00 0.00 3.51
90 91 9.023962 TGCTTACATCATTAAAACTTTCCATCT 57.976 29.630 0.00 0.00 0.00 2.90
91 92 9.860898 GCTTACATCATTAAAACTTTCCATCTT 57.139 29.630 0.00 0.00 0.00 2.40
95 96 9.918630 ACATCATTAAAACTTTCCATCTTCAAG 57.081 29.630 0.00 0.00 0.00 3.02
99 100 9.971922 CATTAAAACTTTCCATCTTCAAGAAGT 57.028 29.630 9.44 0.00 39.38 3.01
133 134 9.890629 ATACAAAACATGCTCTAGAATTACAGA 57.109 29.630 0.00 0.00 0.00 3.41
134 135 8.621532 ACAAAACATGCTCTAGAATTACAGAA 57.378 30.769 0.00 0.00 0.00 3.02
135 136 9.066892 ACAAAACATGCTCTAGAATTACAGAAA 57.933 29.630 0.00 0.00 0.00 2.52
136 137 9.552114 CAAAACATGCTCTAGAATTACAGAAAG 57.448 33.333 0.00 0.00 0.00 2.62
137 138 7.856145 AACATGCTCTAGAATTACAGAAAGG 57.144 36.000 0.00 0.00 0.00 3.11
138 139 6.951971 ACATGCTCTAGAATTACAGAAAGGT 58.048 36.000 0.00 0.00 0.00 3.50
139 140 7.044798 ACATGCTCTAGAATTACAGAAAGGTC 58.955 38.462 0.00 0.00 0.00 3.85
140 141 6.605471 TGCTCTAGAATTACAGAAAGGTCA 57.395 37.500 0.00 0.00 0.00 4.02
141 142 7.004555 TGCTCTAGAATTACAGAAAGGTCAA 57.995 36.000 0.00 0.00 0.00 3.18
142 143 7.450074 TGCTCTAGAATTACAGAAAGGTCAAA 58.550 34.615 0.00 0.00 0.00 2.69
143 144 7.936847 TGCTCTAGAATTACAGAAAGGTCAAAA 59.063 33.333 0.00 0.00 0.00 2.44
144 145 8.784043 GCTCTAGAATTACAGAAAGGTCAAAAA 58.216 33.333 0.00 0.00 0.00 1.94
146 147 9.847224 TCTAGAATTACAGAAAGGTCAAAAACT 57.153 29.630 0.00 0.00 0.00 2.66
149 150 9.403583 AGAATTACAGAAAGGTCAAAAACTACA 57.596 29.630 0.00 0.00 0.00 2.74
153 154 7.696992 ACAGAAAGGTCAAAAACTACAAAGA 57.303 32.000 0.00 0.00 0.00 2.52
154 155 7.535997 ACAGAAAGGTCAAAAACTACAAAGAC 58.464 34.615 0.00 0.00 0.00 3.01
155 156 7.393515 ACAGAAAGGTCAAAAACTACAAAGACT 59.606 33.333 0.00 0.00 0.00 3.24
156 157 8.889717 CAGAAAGGTCAAAAACTACAAAGACTA 58.110 33.333 0.00 0.00 0.00 2.59
157 158 8.890718 AGAAAGGTCAAAAACTACAAAGACTAC 58.109 33.333 0.00 0.00 0.00 2.73
158 159 8.803397 AAAGGTCAAAAACTACAAAGACTACT 57.197 30.769 0.00 0.00 0.00 2.57
159 160 8.803397 AAGGTCAAAAACTACAAAGACTACTT 57.197 30.769 0.00 0.00 38.05 2.24
160 161 8.803397 AGGTCAAAAACTACAAAGACTACTTT 57.197 30.769 0.00 0.00 45.75 2.66
174 175 8.904099 AAAGACTACTTTGCAATAGTACAACT 57.096 30.769 11.73 3.80 43.57 3.16
175 176 9.991906 AAAGACTACTTTGCAATAGTACAACTA 57.008 29.630 11.73 0.00 43.57 2.24
176 177 9.991906 AAGACTACTTTGCAATAGTACAACTAA 57.008 29.630 11.73 0.00 31.37 2.24
177 178 9.640963 AGACTACTTTGCAATAGTACAACTAAG 57.359 33.333 11.73 7.80 33.89 2.18
178 179 9.635520 GACTACTTTGCAATAGTACAACTAAGA 57.364 33.333 11.73 0.00 33.89 2.10
181 182 8.494016 ACTTTGCAATAGTACAACTAAGATCC 57.506 34.615 0.00 0.00 33.89 3.36
182 183 8.100791 ACTTTGCAATAGTACAACTAAGATCCA 58.899 33.333 0.00 0.00 33.89 3.41
183 184 8.856153 TTTGCAATAGTACAACTAAGATCCAA 57.144 30.769 0.00 0.00 33.89 3.53
184 185 8.492673 TTGCAATAGTACAACTAAGATCCAAG 57.507 34.615 0.00 0.00 33.89 3.61
185 186 6.538742 TGCAATAGTACAACTAAGATCCAAGC 59.461 38.462 0.00 0.00 33.89 4.01
186 187 6.538742 GCAATAGTACAACTAAGATCCAAGCA 59.461 38.462 0.00 0.00 33.89 3.91
187 188 7.466050 GCAATAGTACAACTAAGATCCAAGCAC 60.466 40.741 0.00 0.00 33.89 4.40
188 189 5.746990 AGTACAACTAAGATCCAAGCACT 57.253 39.130 0.00 0.00 0.00 4.40
189 190 6.852420 AGTACAACTAAGATCCAAGCACTA 57.148 37.500 0.00 0.00 0.00 2.74
190 191 6.631962 AGTACAACTAAGATCCAAGCACTAC 58.368 40.000 0.00 0.00 0.00 2.73
191 192 5.483685 ACAACTAAGATCCAAGCACTACA 57.516 39.130 0.00 0.00 0.00 2.74
192 193 5.865085 ACAACTAAGATCCAAGCACTACAA 58.135 37.500 0.00 0.00 0.00 2.41
193 194 6.296026 ACAACTAAGATCCAAGCACTACAAA 58.704 36.000 0.00 0.00 0.00 2.83
194 195 6.770785 ACAACTAAGATCCAAGCACTACAAAA 59.229 34.615 0.00 0.00 0.00 2.44
195 196 7.284489 ACAACTAAGATCCAAGCACTACAAAAA 59.716 33.333 0.00 0.00 0.00 1.94
196 197 8.299570 CAACTAAGATCCAAGCACTACAAAAAT 58.700 33.333 0.00 0.00 0.00 1.82
197 198 9.515226 AACTAAGATCCAAGCACTACAAAAATA 57.485 29.630 0.00 0.00 0.00 1.40
198 199 9.686683 ACTAAGATCCAAGCACTACAAAAATAT 57.313 29.630 0.00 0.00 0.00 1.28
199 200 9.941664 CTAAGATCCAAGCACTACAAAAATATG 57.058 33.333 0.00 0.00 0.00 1.78
200 201 6.799512 AGATCCAAGCACTACAAAAATATGC 58.200 36.000 0.00 0.00 36.52 3.14
201 202 5.973899 TCCAAGCACTACAAAAATATGCA 57.026 34.783 0.00 0.00 38.79 3.96
202 203 6.338214 TCCAAGCACTACAAAAATATGCAA 57.662 33.333 0.00 0.00 38.79 4.08
203 204 6.389091 TCCAAGCACTACAAAAATATGCAAG 58.611 36.000 0.00 0.00 38.79 4.01
204 205 5.062558 CCAAGCACTACAAAAATATGCAAGC 59.937 40.000 0.00 0.00 38.79 4.01
205 206 5.389859 AGCACTACAAAAATATGCAAGCA 57.610 34.783 0.00 0.00 38.79 3.91
206 207 5.163513 AGCACTACAAAAATATGCAAGCAC 58.836 37.500 0.00 0.00 38.79 4.40
207 208 5.047802 AGCACTACAAAAATATGCAAGCACT 60.048 36.000 0.00 0.00 38.79 4.40
208 209 6.150976 AGCACTACAAAAATATGCAAGCACTA 59.849 34.615 0.00 0.00 38.79 2.74
209 210 6.251376 GCACTACAAAAATATGCAAGCACTAC 59.749 38.462 0.00 0.00 36.30 2.73
210 211 7.304735 CACTACAAAAATATGCAAGCACTACA 58.695 34.615 0.00 0.00 0.00 2.74
211 212 7.807433 CACTACAAAAATATGCAAGCACTACAA 59.193 33.333 0.00 0.00 0.00 2.41
212 213 8.356657 ACTACAAAAATATGCAAGCACTACAAA 58.643 29.630 0.00 0.00 0.00 2.83
213 214 9.190858 CTACAAAAATATGCAAGCACTACAAAA 57.809 29.630 0.00 0.00 0.00 2.44
214 215 8.606040 ACAAAAATATGCAAGCACTACAAAAT 57.394 26.923 0.00 0.00 0.00 1.82
215 216 8.497554 ACAAAAATATGCAAGCACTACAAAATG 58.502 29.630 0.00 0.00 0.00 2.32
216 217 8.497554 CAAAAATATGCAAGCACTACAAAATGT 58.502 29.630 0.00 0.00 0.00 2.71
217 218 8.606040 AAAATATGCAAGCACTACAAAATGTT 57.394 26.923 0.00 0.00 0.00 2.71
218 219 7.585286 AATATGCAAGCACTACAAAATGTTG 57.415 32.000 0.00 0.00 40.84 3.33
219 220 4.645762 TGCAAGCACTACAAAATGTTGA 57.354 36.364 1.62 0.00 38.20 3.18
220 221 5.003692 TGCAAGCACTACAAAATGTTGAA 57.996 34.783 1.62 0.00 38.20 2.69
221 222 4.803088 TGCAAGCACTACAAAATGTTGAAC 59.197 37.500 1.62 0.00 38.20 3.18
222 223 4.803088 GCAAGCACTACAAAATGTTGAACA 59.197 37.500 1.62 0.00 38.20 3.18
223 224 5.463061 GCAAGCACTACAAAATGTTGAACAT 59.537 36.000 4.72 4.72 41.31 2.71
224 225 6.640499 GCAAGCACTACAAAATGTTGAACATA 59.360 34.615 11.70 0.00 37.97 2.29
225 226 7.329226 GCAAGCACTACAAAATGTTGAACATAT 59.671 33.333 11.70 0.94 37.97 1.78
226 227 9.195411 CAAGCACTACAAAATGTTGAACATATT 57.805 29.630 11.70 5.69 37.97 1.28
293 294 1.665442 AAAAAGGGTCGTGCCATGC 59.335 52.632 0.00 0.00 39.65 4.06
294 295 1.815817 AAAAAGGGTCGTGCCATGCC 61.816 55.000 0.00 0.00 39.65 4.40
316 317 4.170062 CGCGTGCCTTGCATCCAG 62.170 66.667 0.00 0.00 41.91 3.86
317 318 3.818787 GCGTGCCTTGCATCCAGG 61.819 66.667 0.00 0.00 41.91 4.45
321 322 4.764771 GCCTTGCATCCAGGCCCA 62.765 66.667 15.83 0.00 42.52 5.36
322 323 2.441532 CCTTGCATCCAGGCCCAG 60.442 66.667 0.00 0.00 0.00 4.45
323 324 3.145551 CTTGCATCCAGGCCCAGC 61.146 66.667 0.00 0.00 0.00 4.85
324 325 3.949885 CTTGCATCCAGGCCCAGCA 62.950 63.158 0.00 0.00 0.00 4.41
325 326 3.305619 TTGCATCCAGGCCCAGCAT 62.306 57.895 0.00 0.00 34.87 3.79
326 327 3.224324 GCATCCAGGCCCAGCATG 61.224 66.667 0.00 0.00 40.20 4.06
373 374 4.708386 CCCGTTTAGCCCGTGCCA 62.708 66.667 0.00 0.00 38.69 4.92
374 375 2.437716 CCGTTTAGCCCGTGCCAT 60.438 61.111 0.00 0.00 38.69 4.40
375 376 2.760159 CCGTTTAGCCCGTGCCATG 61.760 63.158 0.00 0.00 38.69 3.66
376 377 2.489751 GTTTAGCCCGTGCCATGC 59.510 61.111 0.00 0.00 38.69 4.06
377 378 2.753849 TTTAGCCCGTGCCATGCC 60.754 61.111 0.00 0.00 38.69 4.40
378 379 3.280938 TTTAGCCCGTGCCATGCCT 62.281 57.895 0.00 0.00 38.69 4.75
379 380 3.993614 TTAGCCCGTGCCATGCCTG 62.994 63.158 0.00 0.00 38.69 4.85
436 437 4.960866 GGTTGGCCCGACCCGTTT 62.961 66.667 9.26 0.00 37.83 3.60
437 438 3.666253 GTTGGCCCGACCCGTTTG 61.666 66.667 0.00 0.00 37.83 2.93
438 439 4.958897 TTGGCCCGACCCGTTTGG 62.959 66.667 0.00 0.00 37.83 3.28
445 446 2.676471 GACCCGTTTGGCCAGCAT 60.676 61.111 5.11 0.00 37.83 3.79
446 447 2.203625 ACCCGTTTGGCCAGCATT 60.204 55.556 5.11 0.00 37.83 3.56
447 448 2.262292 CCCGTTTGGCCAGCATTG 59.738 61.111 5.11 0.00 0.00 2.82
448 449 2.274645 CCCGTTTGGCCAGCATTGA 61.275 57.895 5.11 0.00 0.00 2.57
449 450 1.213537 CCGTTTGGCCAGCATTGAG 59.786 57.895 5.11 0.00 0.00 3.02
450 451 1.526575 CCGTTTGGCCAGCATTGAGT 61.527 55.000 5.11 0.00 0.00 3.41
451 452 0.314935 CGTTTGGCCAGCATTGAGTT 59.685 50.000 5.11 0.00 0.00 3.01
452 453 1.787012 GTTTGGCCAGCATTGAGTTG 58.213 50.000 5.11 0.00 0.00 3.16
453 454 1.340889 GTTTGGCCAGCATTGAGTTGA 59.659 47.619 5.11 0.00 0.00 3.18
454 455 1.250328 TTGGCCAGCATTGAGTTGAG 58.750 50.000 5.11 0.00 0.00 3.02
455 456 1.246056 TGGCCAGCATTGAGTTGAGC 61.246 55.000 0.00 0.00 0.00 4.26
463 464 2.730090 GCATTGAGTTGAGCCATTCACG 60.730 50.000 0.00 0.00 34.94 4.35
469 470 2.301870 AGTTGAGCCATTCACGAACCTA 59.698 45.455 0.00 0.00 34.94 3.08
472 473 3.745799 TGAGCCATTCACGAACCTAAAA 58.254 40.909 0.00 0.00 0.00 1.52
479 480 3.552604 TCACGAACCTAAAATTGCTGC 57.447 42.857 0.00 0.00 0.00 5.25
544 545 3.064958 GCTCTTTATTTAAGCGGGACCAC 59.935 47.826 0.00 0.00 33.66 4.16
580 581 0.179145 AGCACCGACCGATTTCTACG 60.179 55.000 0.00 0.00 0.00 3.51
635 636 0.745845 CCCCACCAAGAGCAATCTCG 60.746 60.000 0.00 0.00 44.02 4.04
653 654 2.936912 GCCGCTCTCCACTCACAGT 61.937 63.158 0.00 0.00 0.00 3.55
703 704 2.180769 CGGCGTGTCAATCTCGGA 59.819 61.111 0.00 0.00 34.24 4.55
725 726 3.289629 CACGTCAGCGAGCATACG 58.710 61.111 16.68 16.68 42.00 3.06
731 732 2.464865 GTCAGCGAGCATACGAGAAAT 58.535 47.619 0.00 0.00 35.09 2.17
785 786 1.221840 GATCTTCTTCCGCTGCCCA 59.778 57.895 0.00 0.00 0.00 5.36
882 883 2.816520 CCGACTAAAACCCCCGCG 60.817 66.667 0.00 0.00 0.00 6.46
905 906 1.690616 CCATCATCCCACCACCACA 59.309 57.895 0.00 0.00 0.00 4.17
906 907 0.680921 CCATCATCCCACCACCACAC 60.681 60.000 0.00 0.00 0.00 3.82
915 922 2.906897 CCACCACACCACCACTGC 60.907 66.667 0.00 0.00 0.00 4.40
920 927 2.515991 ACACCACCACTGCAACGG 60.516 61.111 0.00 0.00 0.00 4.44
923 930 2.111043 CCACCACTGCAACGGACT 59.889 61.111 8.04 0.00 0.00 3.85
1141 1151 0.442699 GCGTTCCGATCTGTGGTTTC 59.557 55.000 0.00 0.00 0.00 2.78
1169 1184 0.110056 TGTCTCCGTTCGCGTTAGTC 60.110 55.000 5.77 0.00 39.32 2.59
1303 1318 6.404712 ACCAAGAGTCGAACGAATAATTTC 57.595 37.500 0.00 0.00 0.00 2.17
1334 1356 8.171164 TGACAGTCGAAAGATATATCATGTCT 57.829 34.615 15.08 3.16 45.19 3.41
1354 1376 7.994425 TGTCTCTTATCCAAAGTTATGCAAA 57.006 32.000 0.00 0.00 0.00 3.68
1486 1508 7.716799 ATTTGTTGGCATAGTTCTCCAAATA 57.283 32.000 0.00 0.00 41.05 1.40
1487 1509 7.716799 TTTGTTGGCATAGTTCTCCAAATAT 57.283 32.000 0.00 0.00 41.05 1.28
1488 1510 8.815565 TTTGTTGGCATAGTTCTCCAAATATA 57.184 30.769 0.00 0.00 41.05 0.86
1489 1511 8.450578 TTGTTGGCATAGTTCTCCAAATATAG 57.549 34.615 0.00 0.00 41.05 1.31
1490 1512 6.486657 TGTTGGCATAGTTCTCCAAATATAGC 59.513 38.462 0.00 0.00 41.05 2.97
1491 1513 5.560724 TGGCATAGTTCTCCAAATATAGCC 58.439 41.667 0.00 0.00 37.32 3.93
1492 1514 4.631813 GGCATAGTTCTCCAAATATAGCCG 59.368 45.833 0.00 0.00 32.35 5.52
1493 1515 4.093556 GCATAGTTCTCCAAATATAGCCGC 59.906 45.833 0.00 0.00 0.00 6.53
1513 1546 4.260375 CCGCTTGATATGCTGTGTAAGTTC 60.260 45.833 0.00 0.00 0.00 3.01
1552 1587 1.648467 GCTGATCAGGGGTTTGACGC 61.648 60.000 23.89 2.66 0.00 5.19
1588 1623 4.588899 TGGCTTTGATGCTATACTGTTGT 58.411 39.130 0.00 0.00 0.00 3.32
1643 1678 2.191641 GCTGACATGCTCCCTCCC 59.808 66.667 0.00 0.00 0.00 4.30
1762 1798 3.119990 CCCAGTGCCGTTATTTTGTACAG 60.120 47.826 0.00 0.00 0.00 2.74
1837 1874 6.024552 TCCAGCAAGGAAAATGTTGAATAC 57.975 37.500 0.00 0.00 45.65 1.89
1986 2148 0.251165 GGGTTGCCCAAGTAAGCTCA 60.251 55.000 0.00 0.00 44.65 4.26
1990 2152 3.381045 GTTGCCCAAGTAAGCTCAAAAC 58.619 45.455 0.00 0.00 0.00 2.43
2024 2187 2.224257 TGACCAGCCAAAAGATTTTGCC 60.224 45.455 11.68 2.08 44.62 4.52
2230 2395 5.992729 TGTTTCTGTTCTATTGGTTAACGC 58.007 37.500 0.00 0.00 0.00 4.84
2231 2396 5.049267 TGTTTCTGTTCTATTGGTTAACGCC 60.049 40.000 0.00 0.00 0.00 5.68
2232 2397 4.546829 TCTGTTCTATTGGTTAACGCCT 57.453 40.909 0.00 0.00 0.00 5.52
2233 2398 4.901868 TCTGTTCTATTGGTTAACGCCTT 58.098 39.130 0.00 0.00 0.00 4.35
2234 2399 6.040209 TCTGTTCTATTGGTTAACGCCTTA 57.960 37.500 0.00 0.00 0.00 2.69
2235 2400 6.465948 TCTGTTCTATTGGTTAACGCCTTAA 58.534 36.000 0.00 0.00 0.00 1.85
2236 2401 6.369615 TCTGTTCTATTGGTTAACGCCTTAAC 59.630 38.462 9.16 9.16 40.74 2.01
2237 2402 5.120519 TGTTCTATTGGTTAACGCCTTAACG 59.879 40.000 10.83 0.00 41.91 3.18
2242 2407 1.728425 GGTTAACGCCTTAACGGACTG 59.272 52.381 10.83 0.00 41.91 3.51
2413 2582 7.341445 TCTATTTTGTGGCTTTACACTGTTT 57.659 32.000 0.00 0.00 41.84 2.83
2529 2707 9.635404 ACTTAGTATATGCTCTATGATACTCCC 57.365 37.037 0.00 0.00 36.67 4.30
2530 2708 9.860650 CTTAGTATATGCTCTATGATACTCCCT 57.139 37.037 0.00 0.00 36.67 4.20
2531 2709 9.854668 TTAGTATATGCTCTATGATACTCCCTC 57.145 37.037 0.00 0.00 36.67 4.30
2532 2710 8.113114 AGTATATGCTCTATGATACTCCCTCT 57.887 38.462 0.00 0.00 30.97 3.69
2533 2711 7.998383 AGTATATGCTCTATGATACTCCCTCTG 59.002 40.741 0.00 0.00 30.97 3.35
2534 2712 4.461450 TGCTCTATGATACTCCCTCTGT 57.539 45.455 0.00 0.00 0.00 3.41
2535 2713 4.402829 TGCTCTATGATACTCCCTCTGTC 58.597 47.826 0.00 0.00 0.00 3.51
2536 2714 3.761752 GCTCTATGATACTCCCTCTGTCC 59.238 52.174 0.00 0.00 0.00 4.02
2537 2715 4.751340 GCTCTATGATACTCCCTCTGTCCA 60.751 50.000 0.00 0.00 0.00 4.02
2538 2716 5.389520 CTCTATGATACTCCCTCTGTCCAA 58.610 45.833 0.00 0.00 0.00 3.53
2539 2717 5.777449 TCTATGATACTCCCTCTGTCCAAA 58.223 41.667 0.00 0.00 0.00 3.28
2540 2718 6.202331 TCTATGATACTCCCTCTGTCCAAAA 58.798 40.000 0.00 0.00 0.00 2.44
2541 2719 5.779241 ATGATACTCCCTCTGTCCAAAAA 57.221 39.130 0.00 0.00 0.00 1.94
2568 2746 9.492973 AACTTGTCATCAAAATGGATAAAAAGG 57.507 29.630 0.00 0.00 33.42 3.11
2569 2747 7.603784 ACTTGTCATCAAAATGGATAAAAAGGC 59.396 33.333 0.00 0.00 33.42 4.35
2570 2748 7.002250 TGTCATCAAAATGGATAAAAAGGCA 57.998 32.000 0.00 0.00 33.42 4.75
2571 2749 7.622713 TGTCATCAAAATGGATAAAAAGGCAT 58.377 30.769 0.00 0.00 33.42 4.40
2572 2750 7.549842 TGTCATCAAAATGGATAAAAAGGCATG 59.450 33.333 0.00 0.00 33.42 4.06
2573 2751 7.550196 GTCATCAAAATGGATAAAAAGGCATGT 59.450 33.333 0.00 0.00 33.42 3.21
2574 2752 8.756927 TCATCAAAATGGATAAAAAGGCATGTA 58.243 29.630 0.00 0.00 33.42 2.29
2575 2753 9.550406 CATCAAAATGGATAAAAAGGCATGTAT 57.450 29.630 0.00 0.00 0.00 2.29
2576 2754 9.768662 ATCAAAATGGATAAAAAGGCATGTATC 57.231 29.630 0.00 0.00 0.00 2.24
2577 2755 8.980596 TCAAAATGGATAAAAAGGCATGTATCT 58.019 29.630 0.00 0.00 0.00 1.98
2580 2758 9.866655 AAATGGATAAAAAGGCATGTATCTAGA 57.133 29.630 0.00 0.00 0.00 2.43
2581 2759 9.866655 AATGGATAAAAAGGCATGTATCTAGAA 57.133 29.630 0.00 0.00 0.00 2.10
2582 2760 8.677148 TGGATAAAAAGGCATGTATCTAGAAC 57.323 34.615 0.00 0.00 0.00 3.01
2583 2761 8.494433 TGGATAAAAAGGCATGTATCTAGAACT 58.506 33.333 0.00 0.00 0.00 3.01
2584 2762 9.998106 GGATAAAAAGGCATGTATCTAGAACTA 57.002 33.333 0.00 0.00 0.00 2.24
2615 2793 9.170890 ACATCTAGATACATCCCCTTTTATTCA 57.829 33.333 4.54 0.00 0.00 2.57
2621 2799 9.713684 AGATACATCCCCTTTTATTCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
2624 2802 8.378115 ACATCCCCTTTTATTCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
2625 2803 8.260114 ACATCCCCTTTTATTCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
2626 2804 7.789202 TCCCCTTTTATTCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
2627 2805 8.200024 TCCCCTTTTATTCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
2628 2806 8.313292 TCCCCTTTTATTCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
2629 2807 8.096414 CCCCTTTTATTCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2636 2814 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2637 2815 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2638 2816 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2639 2817 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2640 2818 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2641 2819 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
2642 2820 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
2643 2821 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
2644 2822 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2645 2823 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2646 2824 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2647 2825 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2648 2826 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2649 2827 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2650 2828 0.682209 TTTCCGGACGGAGGGAGTAG 60.682 60.000 13.64 0.00 46.06 2.57
2651 2829 1.856539 TTCCGGACGGAGGGAGTAGT 61.857 60.000 13.64 0.00 46.06 2.73
2652 2830 0.982852 TCCGGACGGAGGGAGTAGTA 60.983 60.000 9.76 0.00 39.76 1.82
2653 2831 0.817229 CCGGACGGAGGGAGTAGTAC 60.817 65.000 4.40 0.00 37.50 2.73
2654 2832 0.107508 CGGACGGAGGGAGTAGTACA 60.108 60.000 2.52 0.00 0.00 2.90
2655 2833 1.387539 GGACGGAGGGAGTAGTACAC 58.612 60.000 2.52 0.00 0.00 2.90
2656 2834 1.340405 GGACGGAGGGAGTAGTACACA 60.340 57.143 2.52 0.00 0.00 3.72
2657 2835 2.652590 GACGGAGGGAGTAGTACACAT 58.347 52.381 2.52 0.00 0.00 3.21
2697 2875 7.716560 TGATGTAATACATTCATCCAGGTTCTG 59.283 37.037 7.39 0.00 39.27 3.02
2744 2922 5.065988 TGCATCTCGCTTTAATTAGGGAAAC 59.934 40.000 0.00 0.00 43.06 2.78
2771 2949 2.368439 ACACTGTCAAACATGTGTGCT 58.632 42.857 11.46 0.00 38.27 4.40
2807 2985 2.063266 CTGTGGTGCATGTCATTTTGC 58.937 47.619 0.00 0.00 39.33 3.68
2875 3053 5.043903 ACGTGTATATGATGAGAACAGTGC 58.956 41.667 0.00 0.00 0.00 4.40
2876 3054 4.147133 CGTGTATATGATGAGAACAGTGCG 59.853 45.833 0.00 0.00 0.00 5.34
2899 3077 6.020678 GCGCAAAGTTATTTAATTTCAGCGAT 60.021 34.615 19.51 0.00 39.37 4.58
2924 3102 5.171695 GCACGTAGTTTTAAAACGAAATGCA 59.828 36.000 28.71 0.00 41.61 3.96
2937 3115 8.532977 AAAACGAAATGCAATATAGCTTTTGT 57.467 26.923 0.00 0.00 40.55 2.83
2965 3143 5.853282 GCATAAACACACAAGTCTTCACATC 59.147 40.000 0.00 0.00 0.00 3.06
3011 3189 8.682936 AATGTGATTATTCTGTCCCATACTTC 57.317 34.615 0.00 0.00 0.00 3.01
3232 3412 2.153645 TGCTGAATTGACGCTGACATT 58.846 42.857 0.00 0.00 0.00 2.71
3238 3418 5.175127 TGAATTGACGCTGACATTAGCTTA 58.825 37.500 0.00 0.00 41.51 3.09
3317 3498 7.786178 TTCTGTTTGGATGTACATATACTGC 57.214 36.000 8.71 0.00 32.00 4.40
3326 3507 7.124750 TGGATGTACATATACTGCATAGCTGAT 59.875 37.037 8.71 0.00 32.00 2.90
3378 3559 3.245229 TGTTTGGATGCCCAGAGTATTGT 60.245 43.478 0.00 0.00 44.60 2.71
3392 3573 8.253113 CCCAGAGTATTGTATTGCAAATTTCTT 58.747 33.333 1.71 0.00 40.91 2.52
3491 3672 3.296709 ATCGGCGTGGTCGAGCTTT 62.297 57.895 16.64 0.00 44.58 3.51
3514 3695 1.864669 CCTCTGCCTCTCTTCTCCTT 58.135 55.000 0.00 0.00 0.00 3.36
3519 3700 0.458260 GCCTCTCTTCTCCTTCCGAC 59.542 60.000 0.00 0.00 0.00 4.79
3589 3770 5.340863 CCCCTTATTGTTTCTTATGGAGGGT 60.341 44.000 0.00 0.00 39.71 4.34
3625 3806 5.767816 AGTTTTACAGGACGAGCAATTTT 57.232 34.783 0.00 0.00 0.00 1.82
3671 3852 1.342174 TGTAACGAGGGAAAGAGCGTT 59.658 47.619 0.00 0.00 46.92 4.84
3717 3898 5.246656 TGAAATTGAGCCAAGTTTCCATCAT 59.753 36.000 2.89 0.00 31.79 2.45
3772 3953 3.088532 AGGCTTGCGAATACCAATTCAA 58.911 40.909 0.00 0.00 41.44 2.69
3784 3965 1.686115 CCAATTCAAGATTCGGGGGCT 60.686 52.381 0.00 0.00 0.00 5.19
3787 3968 0.695924 TTCAAGATTCGGGGGCTGAA 59.304 50.000 0.00 0.00 33.01 3.02
3788 3969 0.918983 TCAAGATTCGGGGGCTGAAT 59.081 50.000 0.00 0.00 41.52 2.57
3792 3973 3.983044 AGATTCGGGGGCTGAATATAC 57.017 47.619 0.00 0.00 39.27 1.47
4063 4512 3.509575 TGCTGCCAATAACAAGGTAAAGG 59.490 43.478 0.00 0.00 0.00 3.11
4067 4516 4.216687 TGCCAATAACAAGGTAAAGGTTCG 59.783 41.667 0.00 0.00 0.00 3.95
4068 4517 4.456566 GCCAATAACAAGGTAAAGGTTCGA 59.543 41.667 0.00 0.00 0.00 3.71
4073 4522 5.900865 AACAAGGTAAAGGTTCGAAACAA 57.099 34.783 16.95 0.00 0.00 2.83
4098 4547 0.923358 TTCCCTGTGAAGTGGTGGTT 59.077 50.000 0.00 0.00 0.00 3.67
4118 4567 3.617540 TGCCAGTGTTTGTAATTGACG 57.382 42.857 0.00 0.00 0.00 4.35
4119 4568 2.946329 TGCCAGTGTTTGTAATTGACGT 59.054 40.909 0.00 0.00 0.00 4.34
4124 4573 5.802956 CCAGTGTTTGTAATTGACGTTGTTT 59.197 36.000 0.00 0.00 0.00 2.83
4163 4616 0.753262 TCTCCGCTCCCTTTATCTGC 59.247 55.000 0.00 0.00 0.00 4.26
4204 4657 4.262506 CCAAGAGAAGGTTCTTCCGTAAGT 60.263 45.833 4.26 0.00 41.99 2.24
4305 4759 4.298103 AGCAATGTCAAGAGATGTTCCT 57.702 40.909 0.00 0.00 0.00 3.36
4308 4762 6.421485 AGCAATGTCAAGAGATGTTCCTATT 58.579 36.000 0.00 0.00 0.00 1.73
4366 4820 7.988028 AGTTTGGTAGTTTATAGAGATCTTGGC 59.012 37.037 0.00 0.00 0.00 4.52
4389 4843 8.417106 TGGCTCATTTGTTTAAGACATGTTTTA 58.583 29.630 0.00 1.53 38.26 1.52
4420 4874 3.965347 ACCACTTTAGGTATGCGGACTAT 59.035 43.478 0.00 0.00 40.98 2.12
4529 4984 4.524316 TGCTTATTGTGCTGCTGAAAAT 57.476 36.364 0.00 0.00 0.00 1.82
4540 4995 6.148948 GTGCTGCTGAAAATTTACATGTGTA 58.851 36.000 9.11 0.00 0.00 2.90
4542 4997 6.640499 TGCTGCTGAAAATTTACATGTGTAAC 59.360 34.615 9.11 0.00 39.92 2.50
4660 5115 2.014068 GCTGATCCAGTAGTTGTGGCC 61.014 57.143 0.00 0.00 34.77 5.36
4830 5292 4.974645 TGTCCAATTATAGGCTGTAGGG 57.025 45.455 0.00 0.00 0.00 3.53
4841 5304 2.173569 AGGCTGTAGGGCAAAATAGGAG 59.826 50.000 0.00 0.00 43.56 3.69
4902 5365 1.544724 TAAATCTGCTGTTGTGGGCC 58.455 50.000 0.00 0.00 0.00 5.80
4963 5426 8.883954 TGCTTATTCAAATGTCACATCAAAAA 57.116 26.923 0.00 0.00 0.00 1.94
4993 5456 3.149005 TCAAGGAACGGGCACTTAAAT 57.851 42.857 0.00 0.00 0.00 1.40
5087 5551 5.710099 TGAATAGGTGAAAACATTCCCTGTC 59.290 40.000 8.13 6.70 36.98 3.51
5327 5792 2.355126 CCTCCGATCCATGTCGCG 60.355 66.667 0.00 0.00 40.17 5.87
5328 5793 2.721859 CTCCGATCCATGTCGCGA 59.278 61.111 3.71 3.71 40.17 5.87
5329 5794 1.658717 CTCCGATCCATGTCGCGAC 60.659 63.158 31.66 31.66 40.17 5.19
5330 5795 2.104132 CCGATCCATGTCGCGACA 59.896 61.111 40.57 40.57 46.44 4.35
5331 5796 1.518352 CCGATCCATGTCGCGACAA 60.518 57.895 41.74 28.07 45.41 3.18
5333 5798 0.930310 CGATCCATGTCGCGACAATT 59.070 50.000 41.74 26.41 45.41 2.32
5334 5799 2.124122 CGATCCATGTCGCGACAATTA 58.876 47.619 41.74 29.21 45.41 1.40
5335 5800 2.538037 CGATCCATGTCGCGACAATTAA 59.462 45.455 41.74 27.51 45.41 1.40
5336 5801 3.184379 CGATCCATGTCGCGACAATTAAT 59.816 43.478 41.74 30.32 45.41 1.40
5337 5802 4.384547 CGATCCATGTCGCGACAATTAATA 59.615 41.667 41.74 24.62 45.41 0.98
5338 5803 5.062183 CGATCCATGTCGCGACAATTAATAT 59.938 40.000 41.74 27.55 45.41 1.28
5339 5804 5.590104 TCCATGTCGCGACAATTAATATG 57.410 39.130 41.74 31.41 45.41 1.78
5340 5805 4.450757 TCCATGTCGCGACAATTAATATGG 59.549 41.667 41.74 37.27 45.41 2.74
5341 5806 4.450757 CCATGTCGCGACAATTAATATGGA 59.549 41.667 41.74 17.42 45.41 3.41
5342 5807 5.122239 CCATGTCGCGACAATTAATATGGAT 59.878 40.000 41.74 20.63 45.41 3.41
5343 5808 5.839262 TGTCGCGACAATTAATATGGATC 57.161 39.130 37.68 7.38 38.56 3.36
5344 5809 4.384547 TGTCGCGACAATTAATATGGATCG 59.615 41.667 37.68 0.00 38.56 3.69
5345 5810 3.924073 TCGCGACAATTAATATGGATCGG 59.076 43.478 3.71 0.00 0.00 4.18
5346 5811 3.062099 CGCGACAATTAATATGGATCGGG 59.938 47.826 0.00 0.00 35.28 5.14
5347 5812 3.374058 GCGACAATTAATATGGATCGGGG 59.626 47.826 0.00 0.00 0.00 5.73
5348 5813 3.938963 CGACAATTAATATGGATCGGGGG 59.061 47.826 0.00 0.00 0.00 5.40
5391 5856 8.993424 ACTAAAATGATGTTATGTACTCCCTCT 58.007 33.333 0.00 0.00 0.00 3.69
5409 5874 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
5410 5875 8.319057 TCCCTCTGTAAAGAAATATAAGAGCA 57.681 34.615 0.00 0.00 0.00 4.26
5411 5876 8.204836 TCCCTCTGTAAAGAAATATAAGAGCAC 58.795 37.037 0.00 0.00 0.00 4.40
5412 5877 8.207545 CCCTCTGTAAAGAAATATAAGAGCACT 58.792 37.037 0.00 0.00 0.00 4.40
5413 5878 9.606631 CCTCTGTAAAGAAATATAAGAGCACTT 57.393 33.333 1.05 1.05 39.81 3.16
5429 5894 7.948034 AGAGCACTTAGATCACTAAAGTAGT 57.052 36.000 0.00 0.00 38.01 2.73
5446 5911 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
5524 5989 9.474920 AACTAAATTCTCATGATTTCGCAAAAA 57.525 25.926 0.00 0.00 0.00 1.94
5676 6171 7.987268 TTCTAAGATGTAGAGTTGCATAACG 57.013 36.000 0.00 0.00 41.71 3.18
5705 6200 2.763448 CTCTCCTCCCGGATATTCATCC 59.237 54.545 0.73 0.00 46.51 3.51
5732 6231 4.128925 TCTAGCTGCACAATTACCTGAG 57.871 45.455 1.02 0.00 0.00 3.35
5734 6233 3.641434 AGCTGCACAATTACCTGAGAT 57.359 42.857 1.02 0.00 0.00 2.75
5742 6241 6.660521 TGCACAATTACCTGAGATTGAGATTT 59.339 34.615 3.36 0.00 36.87 2.17
5775 6274 6.261603 TGAGTATTCAGCATTCATGACAATCC 59.738 38.462 0.00 0.00 0.00 3.01
5776 6275 6.124340 AGTATTCAGCATTCATGACAATCCA 58.876 36.000 0.00 0.00 0.00 3.41
5948 6447 1.338579 GGCTTCCTCTCTCAGTTGGTG 60.339 57.143 0.00 0.00 0.00 4.17
6205 6704 8.953313 GTTGTACTGCTATAATTGGTACCTTTT 58.047 33.333 14.36 9.13 33.88 2.27
6275 6774 3.612860 GCCGTCTTATCCAAGTATATGCG 59.387 47.826 0.00 0.00 33.20 4.73
6483 6983 1.663643 TGACAAACTGCGTGTTCAGAC 59.336 47.619 0.00 0.00 38.03 3.51
6484 6984 1.933853 GACAAACTGCGTGTTCAGACT 59.066 47.619 0.00 0.00 38.03 3.24
6485 6985 1.933853 ACAAACTGCGTGTTCAGACTC 59.066 47.619 0.00 0.00 38.03 3.36
6486 6986 1.071239 CAAACTGCGTGTTCAGACTCG 60.071 52.381 0.00 0.00 43.51 4.18
6487 6987 0.384309 AACTGCGTGTTCAGACTCGA 59.616 50.000 5.35 0.00 43.39 4.04
6488 6988 0.039978 ACTGCGTGTTCAGACTCGAG 60.040 55.000 11.84 11.84 43.39 4.04
6489 6989 0.238553 CTGCGTGTTCAGACTCGAGA 59.761 55.000 21.68 0.00 43.39 4.04
6518 7018 1.002868 CCTGCTGCCTGCTACAAGT 60.003 57.895 0.00 0.00 43.37 3.16
6569 7099 4.765339 GTGCTAGGTTTGTTTCCCTTATGT 59.235 41.667 0.00 0.00 32.08 2.29
6577 7111 4.846779 TGTTTCCCTTATGTCAAACTGC 57.153 40.909 0.00 0.00 31.29 4.40
6586 7120 5.391950 CCTTATGTCAAACTGCGTGCTTAAT 60.392 40.000 0.00 0.00 0.00 1.40
6646 7993 7.449934 AAAGAATCAAATGTGTTGTTCGTTC 57.550 32.000 0.00 0.00 0.00 3.95
6715 8095 8.180920 GGAATAGAAATTTGAAGAGAGTTGAGC 58.819 37.037 0.00 0.00 0.00 4.26
6777 8157 1.767759 ATCTTTTCATTGGCCTCCCG 58.232 50.000 3.32 0.00 0.00 5.14
6816 8196 9.628500 GTATCCCACAATAAACTTCTAATCCTT 57.372 33.333 0.00 0.00 0.00 3.36
6897 8590 4.769215 CACGTCACTTTTACCTAACTTGC 58.231 43.478 0.00 0.00 0.00 4.01
6902 8595 6.436261 GTCACTTTTACCTAACTTGCCTTTC 58.564 40.000 0.00 0.00 0.00 2.62
6928 8621 3.179443 ACTCGACACTTTTCTTGCTCA 57.821 42.857 0.00 0.00 0.00 4.26
6985 8678 2.341257 GATCACATCACTTGCACGTCT 58.659 47.619 0.00 0.00 0.00 4.18
7015 8708 4.439968 GGGATAAGGTTACCGAAAGAGTG 58.560 47.826 0.00 0.00 0.00 3.51
7017 8710 5.127682 GGGATAAGGTTACCGAAAGAGTGTA 59.872 44.000 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.603298 GTTTTACTAAGGTATTTCACGGAAAAG 57.397 33.333 3.67 0.00 35.11 2.27
1 2 9.118300 TGTTTTACTAAGGTATTTCACGGAAAA 57.882 29.630 3.67 0.00 35.11 2.29
4 5 6.875195 CCTGTTTTACTAAGGTATTTCACGGA 59.125 38.462 0.00 0.00 0.00 4.69
6 7 6.093082 CCCCTGTTTTACTAAGGTATTTCACG 59.907 42.308 0.00 0.00 0.00 4.35
7 8 6.376299 CCCCCTGTTTTACTAAGGTATTTCAC 59.624 42.308 0.00 0.00 0.00 3.18
10 11 6.723471 TCCCCCTGTTTTACTAAGGTATTT 57.277 37.500 0.00 0.00 0.00 1.40
11 12 6.723471 TTCCCCCTGTTTTACTAAGGTATT 57.277 37.500 0.00 0.00 0.00 1.89
12 13 6.506413 TCTTTCCCCCTGTTTTACTAAGGTAT 59.494 38.462 0.00 0.00 0.00 2.73
13 14 5.851138 TCTTTCCCCCTGTTTTACTAAGGTA 59.149 40.000 0.00 0.00 0.00 3.08
14 15 4.666431 TCTTTCCCCCTGTTTTACTAAGGT 59.334 41.667 0.00 0.00 0.00 3.50
15 16 5.008331 GTCTTTCCCCCTGTTTTACTAAGG 58.992 45.833 0.00 0.00 0.00 2.69
16 17 5.008331 GGTCTTTCCCCCTGTTTTACTAAG 58.992 45.833 0.00 0.00 0.00 2.18
17 18 4.989277 GGTCTTTCCCCCTGTTTTACTAA 58.011 43.478 0.00 0.00 0.00 2.24
18 19 4.645863 GGTCTTTCCCCCTGTTTTACTA 57.354 45.455 0.00 0.00 0.00 1.82
19 20 3.520691 GGTCTTTCCCCCTGTTTTACT 57.479 47.619 0.00 0.00 0.00 2.24
31 32 5.529581 TCAACATTTTTCTGGGTCTTTCC 57.470 39.130 0.00 0.00 0.00 3.13
32 33 7.841915 TTTTCAACATTTTTCTGGGTCTTTC 57.158 32.000 0.00 0.00 0.00 2.62
33 34 8.806429 AATTTTCAACATTTTTCTGGGTCTTT 57.194 26.923 0.00 0.00 0.00 2.52
34 35 8.806429 AAATTTTCAACATTTTTCTGGGTCTT 57.194 26.923 0.00 0.00 0.00 3.01
35 36 8.806429 AAAATTTTCAACATTTTTCTGGGTCT 57.194 26.923 0.00 0.00 31.09 3.85
48 49 9.809096 TGATGTAAGCACTTAAAATTTTCAACA 57.191 25.926 6.72 2.67 0.00 3.33
61 62 8.637986 TGGAAAGTTTTAATGATGTAAGCACTT 58.362 29.630 0.00 0.00 30.93 3.16
62 63 8.177119 TGGAAAGTTTTAATGATGTAAGCACT 57.823 30.769 0.00 0.00 30.93 4.40
63 64 8.986477 ATGGAAAGTTTTAATGATGTAAGCAC 57.014 30.769 0.00 0.00 30.93 4.40
64 65 9.023962 AGATGGAAAGTTTTAATGATGTAAGCA 57.976 29.630 0.00 0.00 35.55 3.91
65 66 9.860898 AAGATGGAAAGTTTTAATGATGTAAGC 57.139 29.630 0.00 0.00 0.00 3.09
69 70 9.918630 CTTGAAGATGGAAAGTTTTAATGATGT 57.081 29.630 0.00 0.00 0.00 3.06
73 74 9.971922 ACTTCTTGAAGATGGAAAGTTTTAATG 57.028 29.630 16.21 0.00 0.00 1.90
107 108 9.890629 TCTGTAATTCTAGAGCATGTTTTGTAT 57.109 29.630 0.00 0.00 0.00 2.29
108 109 9.719355 TTCTGTAATTCTAGAGCATGTTTTGTA 57.281 29.630 0.00 0.00 0.00 2.41
109 110 8.621532 TTCTGTAATTCTAGAGCATGTTTTGT 57.378 30.769 0.00 0.00 0.00 2.83
110 111 9.552114 CTTTCTGTAATTCTAGAGCATGTTTTG 57.448 33.333 0.00 0.00 0.00 2.44
111 112 8.734386 CCTTTCTGTAATTCTAGAGCATGTTTT 58.266 33.333 0.00 0.00 0.00 2.43
112 113 7.885399 ACCTTTCTGTAATTCTAGAGCATGTTT 59.115 33.333 0.00 0.00 0.00 2.83
113 114 7.398024 ACCTTTCTGTAATTCTAGAGCATGTT 58.602 34.615 0.00 0.00 0.00 2.71
114 115 6.951971 ACCTTTCTGTAATTCTAGAGCATGT 58.048 36.000 0.00 0.00 0.00 3.21
115 116 7.044181 TGACCTTTCTGTAATTCTAGAGCATG 58.956 38.462 0.00 0.00 0.00 4.06
116 117 7.187824 TGACCTTTCTGTAATTCTAGAGCAT 57.812 36.000 0.00 0.00 0.00 3.79
117 118 6.605471 TGACCTTTCTGTAATTCTAGAGCA 57.395 37.500 0.00 0.00 0.00 4.26
118 119 7.907214 TTTGACCTTTCTGTAATTCTAGAGC 57.093 36.000 0.00 0.00 0.00 4.09
120 121 9.847224 AGTTTTTGACCTTTCTGTAATTCTAGA 57.153 29.630 0.00 0.00 0.00 2.43
123 124 9.403583 TGTAGTTTTTGACCTTTCTGTAATTCT 57.596 29.630 0.00 0.00 0.00 2.40
127 128 9.233649 TCTTTGTAGTTTTTGACCTTTCTGTAA 57.766 29.630 0.00 0.00 0.00 2.41
128 129 8.671028 GTCTTTGTAGTTTTTGACCTTTCTGTA 58.329 33.333 0.00 0.00 0.00 2.74
129 130 7.393515 AGTCTTTGTAGTTTTTGACCTTTCTGT 59.606 33.333 0.00 0.00 0.00 3.41
130 131 7.762382 AGTCTTTGTAGTTTTTGACCTTTCTG 58.238 34.615 0.00 0.00 0.00 3.02
131 132 7.939784 AGTCTTTGTAGTTTTTGACCTTTCT 57.060 32.000 0.00 0.00 0.00 2.52
132 133 8.890718 AGTAGTCTTTGTAGTTTTTGACCTTTC 58.109 33.333 0.00 0.00 0.00 2.62
133 134 8.803397 AGTAGTCTTTGTAGTTTTTGACCTTT 57.197 30.769 0.00 0.00 0.00 3.11
134 135 8.803397 AAGTAGTCTTTGTAGTTTTTGACCTT 57.197 30.769 0.00 0.00 0.00 3.50
135 136 8.803397 AAAGTAGTCTTTGTAGTTTTTGACCT 57.197 30.769 0.00 0.00 41.62 3.85
149 150 8.904099 AGTTGTACTATTGCAAAGTAGTCTTT 57.096 30.769 14.48 0.00 43.66 2.52
150 151 9.991906 TTAGTTGTACTATTGCAAAGTAGTCTT 57.008 29.630 14.48 7.85 33.48 3.01
151 152 9.640963 CTTAGTTGTACTATTGCAAAGTAGTCT 57.359 33.333 14.48 15.06 33.48 3.24
152 153 9.635520 TCTTAGTTGTACTATTGCAAAGTAGTC 57.364 33.333 14.48 8.56 33.48 2.59
155 156 9.595823 GGATCTTAGTTGTACTATTGCAAAGTA 57.404 33.333 1.71 10.01 29.64 2.24
156 157 8.100791 TGGATCTTAGTTGTACTATTGCAAAGT 58.899 33.333 1.71 11.02 29.64 2.66
157 158 8.492673 TGGATCTTAGTTGTACTATTGCAAAG 57.507 34.615 1.71 5.16 29.64 2.77
158 159 8.856153 TTGGATCTTAGTTGTACTATTGCAAA 57.144 30.769 1.71 0.00 29.64 3.68
159 160 7.065803 GCTTGGATCTTAGTTGTACTATTGCAA 59.934 37.037 0.00 0.00 29.64 4.08
160 161 6.538742 GCTTGGATCTTAGTTGTACTATTGCA 59.461 38.462 0.00 0.00 29.64 4.08
161 162 6.538742 TGCTTGGATCTTAGTTGTACTATTGC 59.461 38.462 0.00 0.00 29.64 3.56
162 163 7.766278 AGTGCTTGGATCTTAGTTGTACTATTG 59.234 37.037 0.00 0.00 29.64 1.90
163 164 7.852263 AGTGCTTGGATCTTAGTTGTACTATT 58.148 34.615 0.00 0.00 29.64 1.73
164 165 7.425224 AGTGCTTGGATCTTAGTTGTACTAT 57.575 36.000 0.00 0.00 29.64 2.12
165 166 6.852420 AGTGCTTGGATCTTAGTTGTACTA 57.148 37.500 0.00 0.00 0.00 1.82
166 167 5.746990 AGTGCTTGGATCTTAGTTGTACT 57.253 39.130 0.00 0.00 0.00 2.73
167 168 6.395629 TGTAGTGCTTGGATCTTAGTTGTAC 58.604 40.000 0.00 0.00 0.00 2.90
168 169 6.599356 TGTAGTGCTTGGATCTTAGTTGTA 57.401 37.500 0.00 0.00 0.00 2.41
169 170 5.483685 TGTAGTGCTTGGATCTTAGTTGT 57.516 39.130 0.00 0.00 0.00 3.32
170 171 6.801539 TTTGTAGTGCTTGGATCTTAGTTG 57.198 37.500 0.00 0.00 0.00 3.16
171 172 7.817418 TTTTTGTAGTGCTTGGATCTTAGTT 57.183 32.000 0.00 0.00 0.00 2.24
172 173 9.686683 ATATTTTTGTAGTGCTTGGATCTTAGT 57.313 29.630 0.00 0.00 0.00 2.24
173 174 9.941664 CATATTTTTGTAGTGCTTGGATCTTAG 57.058 33.333 0.00 0.00 0.00 2.18
174 175 8.405531 GCATATTTTTGTAGTGCTTGGATCTTA 58.594 33.333 0.00 0.00 33.25 2.10
175 176 7.093814 TGCATATTTTTGTAGTGCTTGGATCTT 60.094 33.333 0.00 0.00 36.78 2.40
176 177 6.377996 TGCATATTTTTGTAGTGCTTGGATCT 59.622 34.615 0.00 0.00 36.78 2.75
177 178 6.563422 TGCATATTTTTGTAGTGCTTGGATC 58.437 36.000 0.00 0.00 36.78 3.36
178 179 6.528537 TGCATATTTTTGTAGTGCTTGGAT 57.471 33.333 0.00 0.00 36.78 3.41
179 180 5.973899 TGCATATTTTTGTAGTGCTTGGA 57.026 34.783 0.00 0.00 36.78 3.53
180 181 5.062558 GCTTGCATATTTTTGTAGTGCTTGG 59.937 40.000 0.00 0.00 36.78 3.61
181 182 5.634439 TGCTTGCATATTTTTGTAGTGCTTG 59.366 36.000 0.00 0.00 36.78 4.01
182 183 5.634859 GTGCTTGCATATTTTTGTAGTGCTT 59.365 36.000 0.00 0.00 36.78 3.91
183 184 5.047802 AGTGCTTGCATATTTTTGTAGTGCT 60.048 36.000 0.00 0.00 36.78 4.40
184 185 5.163513 AGTGCTTGCATATTTTTGTAGTGC 58.836 37.500 0.00 0.00 36.39 4.40
185 186 7.304735 TGTAGTGCTTGCATATTTTTGTAGTG 58.695 34.615 0.00 0.00 0.00 2.74
186 187 7.447374 TGTAGTGCTTGCATATTTTTGTAGT 57.553 32.000 0.00 0.00 0.00 2.73
187 188 8.741101 TTTGTAGTGCTTGCATATTTTTGTAG 57.259 30.769 0.00 0.00 0.00 2.74
188 189 9.703892 ATTTTGTAGTGCTTGCATATTTTTGTA 57.296 25.926 0.00 0.00 0.00 2.41
189 190 8.497554 CATTTTGTAGTGCTTGCATATTTTTGT 58.502 29.630 0.00 0.00 0.00 2.83
190 191 8.497554 ACATTTTGTAGTGCTTGCATATTTTTG 58.502 29.630 0.00 0.00 0.00 2.44
191 192 8.606040 ACATTTTGTAGTGCTTGCATATTTTT 57.394 26.923 0.00 0.00 0.00 1.94
192 193 8.497554 CAACATTTTGTAGTGCTTGCATATTTT 58.502 29.630 0.00 0.00 0.00 1.82
193 194 7.871973 TCAACATTTTGTAGTGCTTGCATATTT 59.128 29.630 0.00 0.00 34.02 1.40
194 195 7.377398 TCAACATTTTGTAGTGCTTGCATATT 58.623 30.769 0.00 0.00 34.02 1.28
195 196 6.923012 TCAACATTTTGTAGTGCTTGCATAT 58.077 32.000 0.00 0.00 34.02 1.78
196 197 6.324561 TCAACATTTTGTAGTGCTTGCATA 57.675 33.333 0.00 0.00 34.02 3.14
197 198 5.199024 TCAACATTTTGTAGTGCTTGCAT 57.801 34.783 0.00 0.00 34.02 3.96
198 199 4.645762 TCAACATTTTGTAGTGCTTGCA 57.354 36.364 0.00 0.00 34.02 4.08
199 200 4.803088 TGTTCAACATTTTGTAGTGCTTGC 59.197 37.500 0.00 0.00 34.02 4.01
200 201 8.746922 ATATGTTCAACATTTTGTAGTGCTTG 57.253 30.769 8.69 0.00 39.88 4.01
275 276 1.665442 GCATGGCACGACCCTTTTT 59.335 52.632 0.00 0.00 37.83 1.94
276 277 2.275380 GGCATGGCACGACCCTTTT 61.275 57.895 15.47 0.00 37.83 2.27
277 278 2.676471 GGCATGGCACGACCCTTT 60.676 61.111 15.47 0.00 37.83 3.11
299 300 4.170062 CTGGATGCAAGGCACGCG 62.170 66.667 3.53 3.53 43.04 6.01
300 301 3.818787 CCTGGATGCAAGGCACGC 61.819 66.667 0.00 0.00 43.04 5.34
305 306 2.441532 CTGGGCCTGGATGCAAGG 60.442 66.667 4.53 0.00 37.91 3.61
306 307 3.145551 GCTGGGCCTGGATGCAAG 61.146 66.667 12.70 0.00 0.00 4.01
307 308 3.305619 ATGCTGGGCCTGGATGCAA 62.306 57.895 16.41 0.17 37.20 4.08
308 309 3.746436 ATGCTGGGCCTGGATGCA 61.746 61.111 16.41 12.77 38.05 3.96
309 310 3.224324 CATGCTGGGCCTGGATGC 61.224 66.667 26.93 13.72 0.00 3.91
310 311 2.520982 CCATGCTGGGCCTGGATG 60.521 66.667 29.74 29.74 45.03 3.51
356 357 3.987954 ATGGCACGGGCTAAACGGG 62.988 63.158 10.74 0.00 40.87 5.28
357 358 2.437716 ATGGCACGGGCTAAACGG 60.438 61.111 10.74 0.00 40.87 4.44
358 359 2.791256 CATGGCACGGGCTAAACG 59.209 61.111 10.74 0.00 40.87 3.60
359 360 2.489751 GCATGGCACGGGCTAAAC 59.510 61.111 10.74 0.00 40.87 2.01
360 361 2.753849 GGCATGGCACGGGCTAAA 60.754 61.111 15.47 0.00 40.87 1.85
361 362 3.727258 AGGCATGGCACGGGCTAA 61.727 61.111 22.64 0.00 39.16 3.09
362 363 4.488136 CAGGCATGGCACGGGCTA 62.488 66.667 22.64 2.50 38.93 3.93
419 420 4.960866 AAACGGGTCGGGCCAACC 62.961 66.667 16.41 16.41 39.65 3.77
420 421 3.666253 CAAACGGGTCGGGCCAAC 61.666 66.667 4.39 1.14 39.65 3.77
421 422 4.958897 CCAAACGGGTCGGGCCAA 62.959 66.667 4.39 0.00 39.65 4.52
428 429 2.275380 AATGCTGGCCAAACGGGTC 61.275 57.895 7.01 0.00 43.63 4.46
429 430 2.203625 AATGCTGGCCAAACGGGT 60.204 55.556 7.01 0.00 39.65 5.28
430 431 2.216750 CTCAATGCTGGCCAAACGGG 62.217 60.000 7.01 0.00 40.85 5.28
431 432 1.213537 CTCAATGCTGGCCAAACGG 59.786 57.895 7.01 0.00 0.00 4.44
432 433 0.314935 AACTCAATGCTGGCCAAACG 59.685 50.000 7.01 0.00 0.00 3.60
433 434 1.340889 TCAACTCAATGCTGGCCAAAC 59.659 47.619 7.01 1.95 0.00 2.93
434 435 1.614903 CTCAACTCAATGCTGGCCAAA 59.385 47.619 7.01 0.00 0.00 3.28
435 436 1.250328 CTCAACTCAATGCTGGCCAA 58.750 50.000 7.01 0.00 0.00 4.52
436 437 1.246056 GCTCAACTCAATGCTGGCCA 61.246 55.000 4.71 4.71 0.00 5.36
437 438 1.509923 GCTCAACTCAATGCTGGCC 59.490 57.895 0.00 0.00 0.00 5.36
438 439 1.246056 TGGCTCAACTCAATGCTGGC 61.246 55.000 0.00 0.00 0.00 4.85
439 440 1.471119 ATGGCTCAACTCAATGCTGG 58.529 50.000 0.00 0.00 0.00 4.85
440 441 2.490509 TGAATGGCTCAACTCAATGCTG 59.509 45.455 0.00 0.00 0.00 4.41
441 442 2.490903 GTGAATGGCTCAACTCAATGCT 59.509 45.455 0.00 0.00 35.22 3.79
442 443 2.730090 CGTGAATGGCTCAACTCAATGC 60.730 50.000 0.00 0.00 35.22 3.56
443 444 2.743664 TCGTGAATGGCTCAACTCAATG 59.256 45.455 0.00 0.00 35.22 2.82
444 445 3.057969 TCGTGAATGGCTCAACTCAAT 57.942 42.857 0.00 0.00 35.22 2.57
445 446 2.542020 TCGTGAATGGCTCAACTCAA 57.458 45.000 0.00 0.00 35.22 3.02
446 447 2.143122 GTTCGTGAATGGCTCAACTCA 58.857 47.619 0.00 0.00 35.22 3.41
447 448 1.464997 GGTTCGTGAATGGCTCAACTC 59.535 52.381 0.00 0.00 35.22 3.01
448 449 1.072331 AGGTTCGTGAATGGCTCAACT 59.928 47.619 0.00 0.00 35.22 3.16
449 450 1.523758 AGGTTCGTGAATGGCTCAAC 58.476 50.000 0.00 0.00 35.22 3.18
450 451 3.410631 TTAGGTTCGTGAATGGCTCAA 57.589 42.857 0.00 0.00 35.22 3.02
451 452 3.410631 TTTAGGTTCGTGAATGGCTCA 57.589 42.857 0.00 0.00 0.00 4.26
452 453 4.965119 ATTTTAGGTTCGTGAATGGCTC 57.035 40.909 0.00 0.00 0.00 4.70
453 454 4.618227 GCAATTTTAGGTTCGTGAATGGCT 60.618 41.667 0.00 0.00 0.00 4.75
454 455 3.612423 GCAATTTTAGGTTCGTGAATGGC 59.388 43.478 0.00 0.00 0.00 4.40
455 456 4.858692 CAGCAATTTTAGGTTCGTGAATGG 59.141 41.667 0.00 0.00 0.00 3.16
492 493 2.390599 CCGGTTGATGGTCTGTGCG 61.391 63.158 0.00 0.00 0.00 5.34
580 581 3.551887 CTTTTCGCCCACCAACCGC 62.552 63.158 0.00 0.00 0.00 5.68
635 636 2.125753 CTGTGAGTGGAGAGCGGC 60.126 66.667 0.00 0.00 0.00 6.53
668 669 4.135570 CAGCGTTTGATTGGTGCG 57.864 55.556 0.00 0.00 0.00 5.34
722 723 5.651139 ACTGCTACCAACTCTATTTCTCGTA 59.349 40.000 0.00 0.00 0.00 3.43
723 724 4.463186 ACTGCTACCAACTCTATTTCTCGT 59.537 41.667 0.00 0.00 0.00 4.18
725 726 6.274579 GGTACTGCTACCAACTCTATTTCTC 58.725 44.000 0.00 0.00 42.16 2.87
755 756 5.020132 CGGAAGAAGATCTATCCTACCCAT 58.980 45.833 16.04 0.00 0.00 4.00
804 805 1.069765 CTCTGCGTGGTTGGTGAGT 59.930 57.895 0.00 0.00 0.00 3.41
846 847 2.049433 CTCGACCAAACCTCGCGT 60.049 61.111 5.77 0.00 0.00 6.01
882 883 2.123726 GGTGGGATGATGGGTGCC 60.124 66.667 0.00 0.00 0.00 5.01
905 906 2.203153 GTCCGTTGCAGTGGTGGT 60.203 61.111 6.23 0.00 0.00 4.16
906 907 1.507141 GAAGTCCGTTGCAGTGGTGG 61.507 60.000 6.23 0.00 0.00 4.61
915 922 1.006102 ACTGGCGAGAAGTCCGTTG 60.006 57.895 1.44 0.00 0.00 4.10
920 927 2.507324 GGCGACTGGCGAGAAGTC 60.507 66.667 7.31 0.00 44.92 3.01
923 930 2.357034 GTTGGCGACTGGCGAGAA 60.357 61.111 7.31 0.00 44.92 2.87
1169 1184 4.641094 AGAGTAGACCGTACAGATCCAAAG 59.359 45.833 0.00 0.00 0.00 2.77
1373 1395 3.372954 CCGGTGATTGACGAGATAACTC 58.627 50.000 0.00 0.00 39.54 3.01
1476 1498 4.415881 TCAAGCGGCTATATTTGGAGAA 57.584 40.909 1.35 0.00 0.00 2.87
1486 1508 2.224378 ACACAGCATATCAAGCGGCTAT 60.224 45.455 1.35 0.00 34.25 2.97
1487 1509 1.138859 ACACAGCATATCAAGCGGCTA 59.861 47.619 1.35 0.00 34.25 3.93
1488 1510 0.107508 ACACAGCATATCAAGCGGCT 60.108 50.000 0.00 0.00 36.99 5.52
1489 1511 1.581934 TACACAGCATATCAAGCGGC 58.418 50.000 0.00 0.00 37.01 6.53
1490 1512 3.198068 ACTTACACAGCATATCAAGCGG 58.802 45.455 0.00 0.00 37.01 5.52
1491 1513 4.548916 CGAACTTACACAGCATATCAAGCG 60.549 45.833 0.00 0.00 37.01 4.68
1492 1514 4.330074 ACGAACTTACACAGCATATCAAGC 59.670 41.667 0.00 0.00 0.00 4.01
1493 1515 5.725042 GCACGAACTTACACAGCATATCAAG 60.725 44.000 0.00 0.00 0.00 3.02
1513 1546 0.168788 ATTCCAGCGTCAATTGCACG 59.831 50.000 19.48 19.48 40.35 5.34
1720 1755 3.999046 GGATACCTATGGTTGGTAACGG 58.001 50.000 0.00 0.00 42.52 4.44
1762 1798 9.601217 ACAGTATGAGGTAAGAAATTATGTCAC 57.399 33.333 0.00 0.00 39.69 3.67
1986 2148 5.681179 GCTGGTCATGGTTTACTTGTGTTTT 60.681 40.000 0.00 0.00 0.00 2.43
1990 2152 2.228822 GGCTGGTCATGGTTTACTTGTG 59.771 50.000 0.00 0.00 0.00 3.33
2230 2395 3.926616 AGTCAACATCAGTCCGTTAAGG 58.073 45.455 0.00 0.00 42.97 2.69
2231 2396 4.152402 CCAAGTCAACATCAGTCCGTTAAG 59.848 45.833 0.00 0.00 0.00 1.85
2232 2397 4.062293 CCAAGTCAACATCAGTCCGTTAA 58.938 43.478 0.00 0.00 0.00 2.01
2233 2398 3.070446 ACCAAGTCAACATCAGTCCGTTA 59.930 43.478 0.00 0.00 0.00 3.18
2234 2399 2.158813 ACCAAGTCAACATCAGTCCGTT 60.159 45.455 0.00 0.00 0.00 4.44
2235 2400 1.416401 ACCAAGTCAACATCAGTCCGT 59.584 47.619 0.00 0.00 0.00 4.69
2236 2401 2.069273 GACCAAGTCAACATCAGTCCG 58.931 52.381 0.00 0.00 32.09 4.79
2237 2402 3.409026 AGACCAAGTCAACATCAGTCC 57.591 47.619 0.00 0.00 34.60 3.85
2242 2407 3.059597 CGTGACAAGACCAAGTCAACATC 60.060 47.826 0.00 0.00 45.38 3.06
2323 2488 1.066908 CTTTCGCCACCAACAACACAT 59.933 47.619 0.00 0.00 0.00 3.21
2493 2664 8.079211 AGAGCATATACTAAGTTTTCTGGTGA 57.921 34.615 0.00 0.00 0.00 4.02
2494 2665 9.988815 ATAGAGCATATACTAAGTTTTCTGGTG 57.011 33.333 0.00 0.00 0.00 4.17
2542 2720 9.492973 CCTTTTTATCCATTTTGATGACAAGTT 57.507 29.630 0.00 0.00 37.32 2.66
2543 2721 7.603784 GCCTTTTTATCCATTTTGATGACAAGT 59.396 33.333 0.00 0.00 37.32 3.16
2544 2722 7.603404 TGCCTTTTTATCCATTTTGATGACAAG 59.397 33.333 0.00 0.00 37.32 3.16
2545 2723 7.448420 TGCCTTTTTATCCATTTTGATGACAA 58.552 30.769 0.00 0.00 0.00 3.18
2546 2724 7.002250 TGCCTTTTTATCCATTTTGATGACA 57.998 32.000 0.00 0.00 0.00 3.58
2547 2725 7.550196 ACATGCCTTTTTATCCATTTTGATGAC 59.450 33.333 0.00 0.00 0.00 3.06
2548 2726 7.622713 ACATGCCTTTTTATCCATTTTGATGA 58.377 30.769 0.00 0.00 0.00 2.92
2549 2727 7.852971 ACATGCCTTTTTATCCATTTTGATG 57.147 32.000 0.00 0.00 0.00 3.07
2550 2728 9.768662 GATACATGCCTTTTTATCCATTTTGAT 57.231 29.630 0.00 0.00 0.00 2.57
2551 2729 8.980596 AGATACATGCCTTTTTATCCATTTTGA 58.019 29.630 0.00 0.00 0.00 2.69
2554 2732 9.866655 TCTAGATACATGCCTTTTTATCCATTT 57.133 29.630 0.00 0.00 0.00 2.32
2555 2733 9.866655 TTCTAGATACATGCCTTTTTATCCATT 57.133 29.630 0.00 0.00 0.00 3.16
2556 2734 9.289782 GTTCTAGATACATGCCTTTTTATCCAT 57.710 33.333 0.00 0.00 0.00 3.41
2557 2735 8.494433 AGTTCTAGATACATGCCTTTTTATCCA 58.506 33.333 0.00 0.00 0.00 3.41
2558 2736 8.910351 AGTTCTAGATACATGCCTTTTTATCC 57.090 34.615 0.00 0.00 0.00 2.59
2589 2767 9.170890 TGAATAAAAGGGGATGTATCTAGATGT 57.829 33.333 15.79 1.25 0.00 3.06
2595 2773 9.713684 TCAAAATGAATAAAAGGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
2598 2776 9.486123 TCATCAAAATGAATAAAAGGGGATGTA 57.514 29.630 0.00 0.00 38.97 2.29
2599 2777 8.260114 GTCATCAAAATGAATAAAAGGGGATGT 58.740 33.333 0.00 0.00 43.42 3.06
2600 2778 8.259411 TGTCATCAAAATGAATAAAAGGGGATG 58.741 33.333 0.00 0.00 43.42 3.51
2601 2779 8.378115 TGTCATCAAAATGAATAAAAGGGGAT 57.622 30.769 0.00 0.00 43.42 3.85
2602 2780 7.789202 TGTCATCAAAATGAATAAAAGGGGA 57.211 32.000 0.00 0.00 43.42 4.81
2603 2781 8.096414 ACTTGTCATCAAAATGAATAAAAGGGG 58.904 33.333 0.00 0.00 43.42 4.79
2611 2789 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2612 2790 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2613 2791 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2614 2792 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2615 2793 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2616 2794 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2617 2795 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2618 2796 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2619 2797 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
2620 2798 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
2621 2799 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
2622 2800 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
2623 2801 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2624 2802 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2625 2803 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2626 2804 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2627 2805 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2628 2806 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2629 2807 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
2630 2808 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2631 2809 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
2632 2810 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
2633 2811 0.982852 TACTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
2634 2812 0.817229 GTACTACTCCCTCCGTCCGG 60.817 65.000 0.00 0.00 0.00 5.14
2635 2813 0.107508 TGTACTACTCCCTCCGTCCG 60.108 60.000 0.00 0.00 0.00 4.79
2636 2814 1.340405 TGTGTACTACTCCCTCCGTCC 60.340 57.143 0.00 0.00 0.00 4.79
2637 2815 2.119801 TGTGTACTACTCCCTCCGTC 57.880 55.000 0.00 0.00 0.00 4.79
2638 2816 2.241685 AGATGTGTACTACTCCCTCCGT 59.758 50.000 0.00 0.00 0.00 4.69
2639 2817 2.933573 AGATGTGTACTACTCCCTCCG 58.066 52.381 0.00 0.00 0.00 4.63
2640 2818 6.207810 CAGAATAGATGTGTACTACTCCCTCC 59.792 46.154 0.00 0.00 0.00 4.30
2641 2819 6.999272 TCAGAATAGATGTGTACTACTCCCTC 59.001 42.308 0.00 0.00 0.00 4.30
2642 2820 6.912426 TCAGAATAGATGTGTACTACTCCCT 58.088 40.000 0.00 0.00 0.00 4.20
2643 2821 7.584122 TTCAGAATAGATGTGTACTACTCCC 57.416 40.000 0.00 0.00 0.00 4.30
2644 2822 8.851145 TCATTCAGAATAGATGTGTACTACTCC 58.149 37.037 0.00 0.00 0.00 3.85
2649 2827 9.708092 CATCATCATTCAGAATAGATGTGTACT 57.292 33.333 22.10 10.18 39.06 2.73
2650 2828 9.486497 ACATCATCATTCAGAATAGATGTGTAC 57.514 33.333 23.82 0.00 41.54 2.90
2684 2862 6.575244 ACCATTTATACAGAACCTGGATGA 57.425 37.500 0.00 0.00 35.56 2.92
2771 2949 6.326323 TGCACCACAGGATAGTTCAATAGATA 59.674 38.462 0.00 0.00 0.00 1.98
2875 3053 6.846870 TCGCTGAAATTAAATAACTTTGCG 57.153 33.333 0.00 0.00 39.84 4.85
2876 3054 7.113027 GCATCGCTGAAATTAAATAACTTTGC 58.887 34.615 0.00 0.00 0.00 3.68
2899 3077 5.171695 GCATTTCGTTTTAAAACTACGTGCA 59.828 36.000 25.99 10.54 36.77 4.57
2937 3115 6.017440 GTGAAGACTTGTGTGTTTATGCCTTA 60.017 38.462 0.00 0.00 29.33 2.69
3011 3189 7.215789 AGATGCTCAGGATCTAAATGTTGTAG 58.784 38.462 6.95 0.00 0.00 2.74
3238 3418 3.007940 TGCACTGTGGTTACAAGCTATCT 59.992 43.478 10.21 0.00 38.21 1.98
3251 3431 7.095523 CCATTTCTTTAGAAAATTGCACTGTGG 60.096 37.037 10.21 5.47 45.81 4.17
3317 3498 7.117523 GGTTGCACTCTTTAGATATCAGCTATG 59.882 40.741 5.32 0.00 0.00 2.23
3326 3507 6.360370 AGAACTGGTTGCACTCTTTAGATA 57.640 37.500 0.00 0.00 0.00 1.98
3392 3573 5.135533 TGAGGGGTATGGAGATGACTTAGTA 59.864 44.000 0.00 0.00 0.00 1.82
3519 3700 3.642778 AATGGACGACACTCCCGCG 62.643 63.158 0.00 0.00 0.00 6.46
3589 3770 4.437239 TGTAAAACTTACCGTTCCGTTCA 58.563 39.130 0.00 0.00 33.90 3.18
3625 3806 0.742505 CCGACCTCCGTATTGCACTA 59.257 55.000 0.00 0.00 36.31 2.74
3671 3852 2.280797 GCACTCCCGCACAGTTGA 60.281 61.111 0.00 0.00 0.00 3.18
3717 3898 3.704800 TTGGATGGTCACGGTATTGAA 57.295 42.857 0.00 0.00 0.00 2.69
3772 3953 3.008049 GTGTATATTCAGCCCCCGAATCT 59.992 47.826 0.00 0.00 34.89 2.40
3784 3965 9.108284 CTGTGTTTGGATGTATGTGTATATTCA 57.892 33.333 0.00 0.00 0.00 2.57
3787 3968 7.053498 TGCTGTGTTTGGATGTATGTGTATAT 58.947 34.615 0.00 0.00 0.00 0.86
3788 3969 6.410540 TGCTGTGTTTGGATGTATGTGTATA 58.589 36.000 0.00 0.00 0.00 1.47
3792 3973 4.707030 ATGCTGTGTTTGGATGTATGTG 57.293 40.909 0.00 0.00 0.00 3.21
3925 4372 0.828022 TGTCACGGTTGTCAGGAACT 59.172 50.000 0.00 0.00 43.88 3.01
3926 4373 1.878953 ATGTCACGGTTGTCAGGAAC 58.121 50.000 0.00 0.00 0.00 3.62
4047 4496 7.419204 TGTTTCGAACCTTTACCTTGTTATTG 58.581 34.615 0.00 0.00 0.00 1.90
4098 4547 2.946329 ACGTCAATTACAAACACTGGCA 59.054 40.909 0.00 0.00 0.00 4.92
4118 4567 6.255670 GGTTCATCAAGAAAACCTGAAACAAC 59.744 38.462 9.32 0.00 39.48 3.32
4119 4568 6.337356 GGTTCATCAAGAAAACCTGAAACAA 58.663 36.000 9.32 0.00 39.48 2.83
4163 4616 0.168128 GGGCATCACGGAAAAACTCG 59.832 55.000 0.00 0.00 0.00 4.18
4204 4657 3.869912 GCATCACAGAGGAGCAGGTAAAA 60.870 47.826 0.00 0.00 0.00 1.52
4256 4710 7.656412 TGCATTTTGAGTTAAAGCTCATGTAA 58.344 30.769 0.00 0.00 43.99 2.41
4305 4759 7.760794 CTGAAAGATTAGCATGTGGCAAAAATA 59.239 33.333 0.00 0.00 40.88 1.40
4308 4762 5.472148 CTGAAAGATTAGCATGTGGCAAAA 58.528 37.500 0.00 0.00 40.88 2.44
4361 4815 6.449698 ACATGTCTTAAACAAATGAGCCAAG 58.550 36.000 0.00 0.00 42.37 3.61
4389 4843 6.704493 CGCATACCTAAAGTGGTAATACACAT 59.296 38.462 0.00 0.00 44.65 3.21
4420 4874 6.009589 TGCCTCAGTTTCATTTCCAAAGATA 58.990 36.000 0.00 0.00 0.00 1.98
4529 4984 9.256477 CTCAGTCTACAAAGTTACACATGTAAA 57.744 33.333 6.05 0.00 41.58 2.01
4540 4995 6.085555 TCGACATTCTCAGTCTACAAAGTT 57.914 37.500 0.00 0.00 33.89 2.66
4542 4997 5.098893 CCTCGACATTCTCAGTCTACAAAG 58.901 45.833 0.00 0.00 33.89 2.77
4699 5161 3.186613 GGATAAGCCTATAACGCAACTGC 59.813 47.826 0.00 0.00 37.78 4.40
4963 5426 4.709397 TGCCCGTTCCTTGATGAATAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
4967 5430 2.238646 AGTGCCCGTTCCTTGATGAATA 59.761 45.455 0.00 0.00 0.00 1.75
4977 5440 3.078837 TGAAGATTTAAGTGCCCGTTCC 58.921 45.455 0.00 0.00 0.00 3.62
4993 5456 9.996554 TTGACTCAACTAAATTCTACATGAAGA 57.003 29.630 0.00 0.00 38.18 2.87
5059 5522 7.599998 CAGGGAATGTTTTCACCTATTCAAAAG 59.400 37.037 0.00 0.00 35.75 2.27
5087 5551 3.484407 CTTCTCCTTGGGCAATAGGATG 58.516 50.000 2.51 0.00 39.72 3.51
5174 5639 2.481952 CAGTGGCTAGTTCTGAAGCAAC 59.518 50.000 0.03 0.03 42.06 4.17
5269 5734 5.221803 TGGGCTTTTTCAATATTTCAAGGCA 60.222 36.000 15.47 5.32 38.27 4.75
5271 5736 6.880529 ACATGGGCTTTTTCAATATTTCAAGG 59.119 34.615 0.00 0.00 0.00 3.61
5273 5738 9.784531 TTTACATGGGCTTTTTCAATATTTCAA 57.215 25.926 0.00 0.00 0.00 2.69
5274 5739 9.956640 ATTTACATGGGCTTTTTCAATATTTCA 57.043 25.926 0.00 0.00 0.00 2.69
5351 5816 8.218488 ACATCATTTTAGTAAGAAGATACCCCC 58.782 37.037 0.00 0.00 0.00 5.40
5352 5817 9.628500 AACATCATTTTAGTAAGAAGATACCCC 57.372 33.333 0.00 0.00 0.00 4.95
5419 5884 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
5436 5901 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
5457 5922 8.293699 ACATTGTTTTGATAAATACTCCCTCC 57.706 34.615 0.00 0.00 0.00 4.30
5705 6200 4.681942 GGTAATTGTGCAGCTAGATCTACG 59.318 45.833 0.00 0.00 0.00 3.51
5754 6253 6.829811 TCTTGGATTGTCATGAATGCTGAATA 59.170 34.615 0.00 0.00 0.00 1.75
5775 6274 0.242825 CCAAGCATGCACCTGTCTTG 59.757 55.000 21.98 13.13 33.69 3.02
5776 6275 0.178981 ACCAAGCATGCACCTGTCTT 60.179 50.000 21.98 0.00 0.00 3.01
5864 6363 1.079612 GGGGCAGCAGCAAAATCAC 60.080 57.895 2.65 0.00 44.61 3.06
5865 6364 1.228956 AGGGGCAGCAGCAAAATCA 60.229 52.632 2.65 0.00 44.61 2.57
5948 6447 0.813210 CCTCGATGCTCTTCCCTTGC 60.813 60.000 0.00 0.00 0.00 4.01
6275 6774 2.741092 TGGTCTGACCACGCTTCC 59.259 61.111 25.12 0.00 44.79 3.46
6483 6983 1.219393 GGGGCTTCTTGGTCTCGAG 59.781 63.158 5.93 5.93 0.00 4.04
6484 6984 1.229209 AGGGGCTTCTTGGTCTCGA 60.229 57.895 0.00 0.00 0.00 4.04
6485 6985 1.078848 CAGGGGCTTCTTGGTCTCG 60.079 63.158 0.00 0.00 0.00 4.04
6486 6986 1.377856 GCAGGGGCTTCTTGGTCTC 60.378 63.158 0.00 0.00 36.96 3.36
6487 6987 2.759795 GCAGGGGCTTCTTGGTCT 59.240 61.111 0.00 0.00 36.96 3.85
6569 7099 3.058293 CCAAGATTAAGCACGCAGTTTGA 60.058 43.478 0.00 0.00 41.61 2.69
6577 7111 2.349886 GAGTCAGCCAAGATTAAGCACG 59.650 50.000 0.00 0.00 0.00 5.34
6586 7120 3.478857 TTAAAACGGAGTCAGCCAAGA 57.521 42.857 0.00 0.00 45.00 3.02
6642 7989 8.484008 CCAAAACAAAACATAGTTTATGGAACG 58.516 33.333 0.00 0.00 43.20 3.95
6646 7993 9.103861 ACAACCAAAACAAAACATAGTTTATGG 57.896 29.630 1.70 1.70 40.47 2.74
6722 8102 4.219944 ACCTTCTAAATTTCCTTTTCCCGC 59.780 41.667 0.00 0.00 0.00 6.13
6723 8103 5.475564 TGACCTTCTAAATTTCCTTTTCCCG 59.524 40.000 0.00 0.00 0.00 5.14
6777 8157 0.663153 GGGATACGTGAATTGCCAGC 59.337 55.000 0.00 0.00 37.60 4.85
6816 8196 5.097529 GTCAGTTAAACGTCATCGGTATCA 58.902 41.667 0.00 0.00 41.85 2.15
6928 8621 6.257849 CACATGTGGATAGTTATTACTGCGTT 59.742 38.462 18.51 0.00 35.78 4.84
6985 8678 3.888930 CGGTAACCTTATCCCGTACCTTA 59.111 47.826 0.00 0.00 35.78 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.