Multiple sequence alignment - TraesCS6D01G209100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G209100 chr6D 100.000 2444 0 0 1 2444 295356001 295353558 0.000000e+00 4514
1 TraesCS6D01G209100 chr6D 91.503 153 8 4 387 536 447067814 447067664 3.190000e-49 206
2 TraesCS6D01G209100 chr6B 95.895 1291 41 6 538 1820 459603029 459601743 0.000000e+00 2080
3 TraesCS6D01G209100 chr6B 92.020 401 23 6 1 397 459603417 459603022 2.750000e-154 555
4 TraesCS6D01G209100 chr6B 92.969 256 12 3 1828 2083 459601642 459601393 3.840000e-98 368
5 TraesCS6D01G209100 chr6A 93.029 1162 45 11 538 1683 425657128 425658269 0.000000e+00 1664
6 TraesCS6D01G209100 chr6A 90.355 394 29 7 1 388 425656736 425657126 2.170000e-140 508
7 TraesCS6D01G209100 chr6A 90.652 353 30 3 2082 2433 510880625 510880975 1.320000e-127 466
8 TraesCS6D01G209100 chr6A 95.185 270 10 1 1814 2083 425658409 425658675 8.080000e-115 424
9 TraesCS6D01G209100 chr6A 100.000 53 0 0 1763 1815 425658284 425658336 5.560000e-17 99
10 TraesCS6D01G209100 chr1A 94.215 363 18 2 2082 2444 10238235 10237876 3.550000e-153 551
11 TraesCS6D01G209100 chr4B 93.939 363 22 0 2082 2444 358184718 358184356 1.280000e-152 549
12 TraesCS6D01G209100 chr4B 75.802 343 73 9 2107 2444 599178955 599179292 5.410000e-37 165
13 TraesCS6D01G209100 chr1D 93.094 362 23 2 2082 2442 410750243 410750603 1.660000e-146 529
14 TraesCS6D01G209100 chr1D 96.711 152 2 2 387 537 479800227 479800078 1.450000e-62 250
15 TraesCS6D01G209100 chr7D 89.779 362 35 2 2082 2442 91146783 91146423 1.710000e-126 462
16 TraesCS6D01G209100 chr5D 89.227 362 37 2 2082 2442 465091628 465091268 3.710000e-123 451
17 TraesCS6D01G209100 chr5A 89.130 230 23 2 2210 2439 123120086 123120313 3.980000e-73 285
18 TraesCS6D01G209100 chr4D 98.667 150 0 1 387 536 448401549 448401696 5.180000e-67 265
19 TraesCS6D01G209100 chr4D 94.079 152 4 3 387 535 467972333 467972184 2.450000e-55 226
20 TraesCS6D01G209100 chr3D 98.658 149 0 1 387 535 179351872 179352018 1.860000e-66 263
21 TraesCS6D01G209100 chr2A 93.377 151 7 2 387 536 5110085 5110233 1.140000e-53 220
22 TraesCS6D01G209100 chr7A 78.042 337 70 4 2108 2442 735627815 735627481 2.460000e-50 209


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G209100 chr6D 295353558 295356001 2443 True 4514.00 4514 100.00000 1 2444 1 chr6D.!!$R1 2443
1 TraesCS6D01G209100 chr6B 459601393 459603417 2024 True 1001.00 2080 93.62800 1 2083 3 chr6B.!!$R1 2082
2 TraesCS6D01G209100 chr6A 425656736 425658675 1939 False 673.75 1664 94.64225 1 2083 4 chr6A.!!$F2 2082

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
452 460 0.039074 GGACACGTGTGGTCTCTCAG 60.039 60.0 28.82 0.0 35.61 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2181 2361 0.034089 CCGGATCCTTTTCCTGCCTT 60.034 55.0 10.75 0.0 33.3 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 126 8.909708 TGTATGAAAAATTGATAAAGAAGGCG 57.090 30.769 0.00 0.00 0.00 5.52
132 137 3.381045 TGATAAAGAAGGCGCGTCATAG 58.619 45.455 15.58 0.00 0.00 2.23
150 155 2.684001 AGCGGGTCAACATCGATTAA 57.316 45.000 0.00 0.00 0.00 1.40
234 242 3.493334 CAATGCCACACTATCCCATCAT 58.507 45.455 0.00 0.00 0.00 2.45
257 265 0.652592 GATTCGTGCAAGTCATCCGG 59.347 55.000 0.00 0.00 0.00 5.14
304 312 7.607250 TGAGAGGTAATGAGAGAACTTTCTTC 58.393 38.462 0.00 0.00 37.73 2.87
368 376 5.738909 AGCTAATTACTGCATATAGCCCAG 58.261 41.667 10.73 0.00 44.83 4.45
379 387 4.383118 GCATATAGCCCAGTTGGACGATAT 60.383 45.833 0.00 0.00 37.39 1.63
388 396 5.183228 CCAGTTGGACGATATTGTTAACCT 58.817 41.667 15.30 0.00 37.39 3.50
389 397 5.293569 CCAGTTGGACGATATTGTTAACCTC 59.706 44.000 15.30 0.00 37.39 3.85
390 398 5.872617 CAGTTGGACGATATTGTTAACCTCA 59.127 40.000 15.30 0.00 0.00 3.86
391 399 6.538742 CAGTTGGACGATATTGTTAACCTCAT 59.461 38.462 15.30 0.00 0.00 2.90
392 400 7.065803 CAGTTGGACGATATTGTTAACCTCATT 59.934 37.037 15.30 1.47 0.00 2.57
393 401 6.918892 TGGACGATATTGTTAACCTCATTG 57.081 37.500 2.48 0.31 0.00 2.82
394 402 6.411376 TGGACGATATTGTTAACCTCATTGT 58.589 36.000 2.48 3.43 0.00 2.71
395 403 7.557724 TGGACGATATTGTTAACCTCATTGTA 58.442 34.615 2.48 0.00 0.00 2.41
396 404 8.208224 TGGACGATATTGTTAACCTCATTGTAT 58.792 33.333 2.48 0.00 0.00 2.29
397 405 9.052759 GGACGATATTGTTAACCTCATTGTATT 57.947 33.333 2.48 0.00 0.00 1.89
410 418 9.546428 AACCTCATTGTATTTTTCTTTCTTTGG 57.454 29.630 0.00 0.00 0.00 3.28
411 419 8.150296 ACCTCATTGTATTTTTCTTTCTTTGGG 58.850 33.333 0.00 0.00 0.00 4.12
412 420 7.603784 CCTCATTGTATTTTTCTTTCTTTGGGG 59.396 37.037 0.00 0.00 0.00 4.96
413 421 7.449247 TCATTGTATTTTTCTTTCTTTGGGGG 58.551 34.615 0.00 0.00 0.00 5.40
414 422 6.816616 TTGTATTTTTCTTTCTTTGGGGGT 57.183 33.333 0.00 0.00 0.00 4.95
415 423 6.413783 TGTATTTTTCTTTCTTTGGGGGTC 57.586 37.500 0.00 0.00 0.00 4.46
416 424 6.140377 TGTATTTTTCTTTCTTTGGGGGTCT 58.860 36.000 0.00 0.00 0.00 3.85
417 425 6.613679 TGTATTTTTCTTTCTTTGGGGGTCTT 59.386 34.615 0.00 0.00 0.00 3.01
418 426 6.575244 ATTTTTCTTTCTTTGGGGGTCTTT 57.425 33.333 0.00 0.00 0.00 2.52
419 427 6.381498 TTTTTCTTTCTTTGGGGGTCTTTT 57.619 33.333 0.00 0.00 0.00 2.27
420 428 5.607939 TTTCTTTCTTTGGGGGTCTTTTC 57.392 39.130 0.00 0.00 0.00 2.29
421 429 3.219281 TCTTTCTTTGGGGGTCTTTTCG 58.781 45.455 0.00 0.00 0.00 3.46
422 430 1.324383 TTCTTTGGGGGTCTTTTCGC 58.676 50.000 0.00 0.00 0.00 4.70
423 431 0.183971 TCTTTGGGGGTCTTTTCGCA 59.816 50.000 0.00 0.00 0.00 5.10
424 432 1.203001 TCTTTGGGGGTCTTTTCGCAT 60.203 47.619 0.00 0.00 0.00 4.73
425 433 0.965439 TTTGGGGGTCTTTTCGCATG 59.035 50.000 0.00 0.00 0.00 4.06
426 434 0.178975 TTGGGGGTCTTTTCGCATGT 60.179 50.000 0.00 0.00 0.00 3.21
427 435 0.893270 TGGGGGTCTTTTCGCATGTG 60.893 55.000 0.00 0.00 0.00 3.21
428 436 0.893727 GGGGGTCTTTTCGCATGTGT 60.894 55.000 6.09 0.00 0.00 3.72
429 437 0.240945 GGGGTCTTTTCGCATGTGTG 59.759 55.000 6.09 0.00 0.00 3.82
430 438 0.951558 GGGTCTTTTCGCATGTGTGT 59.048 50.000 6.09 0.00 0.00 3.72
431 439 1.336755 GGGTCTTTTCGCATGTGTGTT 59.663 47.619 6.09 0.00 0.00 3.32
432 440 2.384382 GGTCTTTTCGCATGTGTGTTG 58.616 47.619 6.09 0.00 0.00 3.33
433 441 2.384382 GTCTTTTCGCATGTGTGTTGG 58.616 47.619 6.09 0.00 0.00 3.77
434 442 1.336440 TCTTTTCGCATGTGTGTTGGG 59.664 47.619 6.09 0.00 0.00 4.12
435 443 1.336440 CTTTTCGCATGTGTGTTGGGA 59.664 47.619 6.09 0.00 34.64 4.37
436 444 0.665835 TTTCGCATGTGTGTTGGGAC 59.334 50.000 6.09 0.00 35.99 4.46
437 445 0.464554 TTCGCATGTGTGTTGGGACA 60.465 50.000 6.09 0.00 35.99 4.02
444 452 3.416490 GTGTTGGGACACGTGTGG 58.584 61.111 28.82 0.00 45.92 4.17
445 453 1.450669 GTGTTGGGACACGTGTGGT 60.451 57.895 28.82 0.00 45.92 4.16
446 454 1.153329 TGTTGGGACACGTGTGGTC 60.153 57.895 28.82 11.95 39.29 4.02
447 455 1.145377 GTTGGGACACGTGTGGTCT 59.855 57.895 28.82 0.00 39.29 3.85
448 456 0.878961 GTTGGGACACGTGTGGTCTC 60.879 60.000 28.82 12.70 39.29 3.36
449 457 1.046472 TTGGGACACGTGTGGTCTCT 61.046 55.000 28.82 0.00 39.29 3.10
450 458 1.289380 GGGACACGTGTGGTCTCTC 59.711 63.158 28.82 7.26 32.91 3.20
451 459 1.461091 GGGACACGTGTGGTCTCTCA 61.461 60.000 28.82 0.00 32.91 3.27
452 460 0.039074 GGACACGTGTGGTCTCTCAG 60.039 60.000 28.82 0.00 35.61 3.35
453 461 0.039074 GACACGTGTGGTCTCTCAGG 60.039 60.000 28.82 0.00 34.19 3.86
454 462 1.290324 CACGTGTGGTCTCTCAGGG 59.710 63.158 7.58 0.00 0.00 4.45
455 463 1.152525 ACGTGTGGTCTCTCAGGGT 60.153 57.895 0.00 0.00 0.00 4.34
456 464 1.179814 ACGTGTGGTCTCTCAGGGTC 61.180 60.000 0.00 0.00 0.00 4.46
457 465 0.896019 CGTGTGGTCTCTCAGGGTCT 60.896 60.000 0.00 0.00 0.00 3.85
458 466 1.343069 GTGTGGTCTCTCAGGGTCTT 58.657 55.000 0.00 0.00 0.00 3.01
459 467 1.694696 GTGTGGTCTCTCAGGGTCTTT 59.305 52.381 0.00 0.00 0.00 2.52
460 468 1.971357 TGTGGTCTCTCAGGGTCTTTC 59.029 52.381 0.00 0.00 0.00 2.62
461 469 1.067495 GTGGTCTCTCAGGGTCTTTCG 60.067 57.143 0.00 0.00 0.00 3.46
462 470 1.203013 TGGTCTCTCAGGGTCTTTCGA 60.203 52.381 0.00 0.00 0.00 3.71
463 471 1.202817 GGTCTCTCAGGGTCTTTCGAC 59.797 57.143 0.00 0.00 39.49 4.20
464 472 1.135632 GTCTCTCAGGGTCTTTCGACG 60.136 57.143 0.00 0.00 41.16 5.12
465 473 1.166129 CTCTCAGGGTCTTTCGACGA 58.834 55.000 0.00 0.00 41.16 4.20
466 474 1.746220 CTCTCAGGGTCTTTCGACGAT 59.254 52.381 0.00 0.00 41.16 3.73
467 475 1.472878 TCTCAGGGTCTTTCGACGATG 59.527 52.381 0.00 0.00 41.16 3.84
468 476 0.108804 TCAGGGTCTTTCGACGATGC 60.109 55.000 0.00 0.00 41.16 3.91
469 477 0.108615 CAGGGTCTTTCGACGATGCT 60.109 55.000 0.00 0.00 41.16 3.79
470 478 0.108615 AGGGTCTTTCGACGATGCTG 60.109 55.000 0.00 0.00 41.16 4.41
471 479 1.696832 GGGTCTTTCGACGATGCTGC 61.697 60.000 0.00 0.00 41.16 5.25
472 480 1.341802 GTCTTTCGACGATGCTGCG 59.658 57.895 0.00 0.00 37.29 5.18
479 487 3.114616 ACGATGCTGCGTCTGTGC 61.115 61.111 18.79 0.00 41.22 4.57
480 488 2.812609 CGATGCTGCGTCTGTGCT 60.813 61.111 18.79 0.00 35.36 4.40
481 489 1.517039 CGATGCTGCGTCTGTGCTA 60.517 57.895 18.79 0.00 35.36 3.49
482 490 1.746727 CGATGCTGCGTCTGTGCTAC 61.747 60.000 18.79 0.00 35.36 3.58
483 491 0.737367 GATGCTGCGTCTGTGCTACA 60.737 55.000 14.43 0.00 35.36 2.74
484 492 0.107993 ATGCTGCGTCTGTGCTACAT 60.108 50.000 0.00 0.00 35.36 2.29
485 493 0.737367 TGCTGCGTCTGTGCTACATC 60.737 55.000 0.00 0.00 35.36 3.06
486 494 0.459237 GCTGCGTCTGTGCTACATCT 60.459 55.000 0.00 0.00 35.36 2.90
487 495 1.275505 CTGCGTCTGTGCTACATCTG 58.724 55.000 0.00 0.00 35.36 2.90
488 496 0.603065 TGCGTCTGTGCTACATCTGT 59.397 50.000 0.00 0.00 35.36 3.41
489 497 1.816224 TGCGTCTGTGCTACATCTGTA 59.184 47.619 0.00 0.00 35.36 2.74
490 498 2.427095 TGCGTCTGTGCTACATCTGTAT 59.573 45.455 0.00 0.00 35.36 2.29
491 499 3.046390 GCGTCTGTGCTACATCTGTATC 58.954 50.000 0.00 0.00 0.00 2.24
492 500 3.633235 CGTCTGTGCTACATCTGTATCC 58.367 50.000 0.00 0.00 0.00 2.59
493 501 3.633235 GTCTGTGCTACATCTGTATCCG 58.367 50.000 0.00 0.00 0.00 4.18
494 502 3.066900 GTCTGTGCTACATCTGTATCCGT 59.933 47.826 0.00 0.00 0.00 4.69
495 503 3.699538 TCTGTGCTACATCTGTATCCGTT 59.300 43.478 0.00 0.00 0.00 4.44
496 504 4.159693 TCTGTGCTACATCTGTATCCGTTT 59.840 41.667 0.00 0.00 0.00 3.60
497 505 4.430007 TGTGCTACATCTGTATCCGTTTC 58.570 43.478 0.00 0.00 0.00 2.78
498 506 4.159693 TGTGCTACATCTGTATCCGTTTCT 59.840 41.667 0.00 0.00 0.00 2.52
499 507 4.504461 GTGCTACATCTGTATCCGTTTCTG 59.496 45.833 0.00 0.00 0.00 3.02
500 508 4.051922 GCTACATCTGTATCCGTTTCTGG 58.948 47.826 0.00 0.00 0.00 3.86
501 509 4.202121 GCTACATCTGTATCCGTTTCTGGA 60.202 45.833 0.00 0.00 43.58 3.86
503 511 6.294564 GCTACATCTGTATCCGTTTCTGGATA 60.295 42.308 0.00 0.00 46.95 2.59
513 521 6.995511 TCCGTTTCTGGATAAGGTTTAATG 57.004 37.500 0.00 0.00 31.53 1.90
514 522 5.355910 TCCGTTTCTGGATAAGGTTTAATGC 59.644 40.000 0.00 0.00 31.53 3.56
515 523 5.124776 CCGTTTCTGGATAAGGTTTAATGCA 59.875 40.000 0.00 0.00 0.00 3.96
516 524 6.258160 CGTTTCTGGATAAGGTTTAATGCAG 58.742 40.000 0.00 0.00 41.42 4.41
517 525 6.128007 CGTTTCTGGATAAGGTTTAATGCAGT 60.128 38.462 0.00 0.00 41.01 4.40
518 526 7.065324 CGTTTCTGGATAAGGTTTAATGCAGTA 59.935 37.037 0.00 0.00 41.01 2.74
519 527 8.903820 GTTTCTGGATAAGGTTTAATGCAGTAT 58.096 33.333 0.00 0.00 41.01 2.12
520 528 9.474313 TTTCTGGATAAGGTTTAATGCAGTATT 57.526 29.630 0.00 0.00 41.01 1.89
521 529 8.677148 TCTGGATAAGGTTTAATGCAGTATTC 57.323 34.615 0.00 0.00 41.01 1.75
522 530 8.494433 TCTGGATAAGGTTTAATGCAGTATTCT 58.506 33.333 0.00 0.00 41.01 2.40
523 531 9.125026 CTGGATAAGGTTTAATGCAGTATTCTT 57.875 33.333 0.00 2.51 36.95 2.52
524 532 9.120538 TGGATAAGGTTTAATGCAGTATTCTTC 57.879 33.333 0.00 0.00 0.00 2.87
525 533 9.343539 GGATAAGGTTTAATGCAGTATTCTTCT 57.656 33.333 0.00 0.00 0.00 2.85
527 535 7.631717 AAGGTTTAATGCAGTATTCTTCTCC 57.368 36.000 0.00 0.00 0.00 3.71
528 536 6.721318 AGGTTTAATGCAGTATTCTTCTCCA 58.279 36.000 0.00 0.00 0.00 3.86
529 537 7.175104 AGGTTTAATGCAGTATTCTTCTCCAA 58.825 34.615 0.00 0.00 0.00 3.53
530 538 7.669722 AGGTTTAATGCAGTATTCTTCTCCAAA 59.330 33.333 0.00 0.00 0.00 3.28
531 539 8.303876 GGTTTAATGCAGTATTCTTCTCCAAAA 58.696 33.333 0.00 0.00 0.00 2.44
532 540 9.691362 GTTTAATGCAGTATTCTTCTCCAAAAA 57.309 29.630 0.00 0.00 0.00 1.94
559 567 2.736682 GCATGCCCACACGACGTAC 61.737 63.158 6.36 0.00 0.00 3.67
932 942 2.777692 TCCGCATATTTTCCTCCTTCCT 59.222 45.455 0.00 0.00 0.00 3.36
1065 1075 3.310860 GAAGCGGAAGGAGCGGGAA 62.311 63.158 0.00 0.00 40.04 3.97
1135 1151 1.871126 CGTGAGACAGGAGCTGCTGA 61.871 60.000 37.98 15.92 34.37 4.26
1137 1153 1.256361 TGAGACAGGAGCTGCTGAGG 61.256 60.000 37.98 15.55 34.37 3.86
1440 1459 0.398318 GCTGGCTCCGGATTAAGGAT 59.602 55.000 3.57 0.00 37.13 3.24
1620 1643 5.068234 TGTTCAGGTACTAGATGTTTCGG 57.932 43.478 0.00 0.00 36.02 4.30
1676 1699 2.300433 CGGCATCAGAATTTCATGGGA 58.700 47.619 0.00 0.00 0.00 4.37
1687 1710 7.069578 TCAGAATTTCATGGGAGTAGTAGTACC 59.930 40.741 4.02 0.00 0.00 3.34
1688 1711 6.901300 AGAATTTCATGGGAGTAGTAGTACCA 59.099 38.462 11.58 11.58 35.39 3.25
1689 1712 6.732896 ATTTCATGGGAGTAGTAGTACCAG 57.267 41.667 14.50 7.12 34.23 4.00
1707 1730 8.149973 AGTACCAGTACTTTTTAACATGTGTG 57.850 34.615 0.00 0.00 43.35 3.82
1750 1773 4.201657 TCTGTATCGGAAGGTGTTCGATA 58.798 43.478 0.00 0.00 32.92 2.92
1815 1838 4.515191 GGAAATCCTTCGCTTGCATATGTA 59.485 41.667 4.29 0.00 31.77 2.29
1855 2035 6.038714 ACATTTCTCCGAGATTAAATTGAGCC 59.961 38.462 0.00 0.00 0.00 4.70
2019 2199 1.680338 GATGCCTCCCACATTGTACC 58.320 55.000 0.00 0.00 0.00 3.34
2035 2215 1.200716 GTACCGTGTCTCGATTGTCCA 59.799 52.381 0.00 0.00 42.86 4.02
2038 2218 2.289444 ACCGTGTCTCGATTGTCCATTT 60.289 45.455 0.00 0.00 42.86 2.32
2068 2248 6.151691 GTGAAGAATCTGTTGCATTTGCTAA 58.848 36.000 3.94 0.00 42.66 3.09
2083 2263 2.380941 TGCTAACAGGGCGATGTACTA 58.619 47.619 0.00 0.00 31.70 1.82
2084 2264 2.963101 TGCTAACAGGGCGATGTACTAT 59.037 45.455 0.00 0.00 31.70 2.12
2085 2265 3.005472 TGCTAACAGGGCGATGTACTATC 59.995 47.826 0.00 0.00 31.70 2.08
2086 2266 3.614390 GCTAACAGGGCGATGTACTATCC 60.614 52.174 0.00 0.00 31.70 2.59
2087 2267 2.383442 ACAGGGCGATGTACTATCCT 57.617 50.000 0.00 0.00 0.00 3.24
2088 2268 2.679082 ACAGGGCGATGTACTATCCTT 58.321 47.619 0.00 0.00 0.00 3.36
2089 2269 2.365617 ACAGGGCGATGTACTATCCTTG 59.634 50.000 0.00 0.02 0.00 3.61
2090 2270 1.971357 AGGGCGATGTACTATCCTTGG 59.029 52.381 0.00 0.00 0.00 3.61
2091 2271 1.692519 GGGCGATGTACTATCCTTGGT 59.307 52.381 0.00 0.00 0.00 3.67
2092 2272 2.548067 GGGCGATGTACTATCCTTGGTG 60.548 54.545 0.00 0.00 0.00 4.17
2093 2273 2.364324 GGCGATGTACTATCCTTGGTGA 59.636 50.000 0.00 0.00 0.00 4.02
2094 2274 3.006967 GGCGATGTACTATCCTTGGTGAT 59.993 47.826 0.00 0.00 0.00 3.06
2095 2275 3.990469 GCGATGTACTATCCTTGGTGATG 59.010 47.826 0.00 0.00 0.00 3.07
2096 2276 4.501571 GCGATGTACTATCCTTGGTGATGT 60.502 45.833 0.00 0.00 0.00 3.06
2097 2277 4.984785 CGATGTACTATCCTTGGTGATGTG 59.015 45.833 0.00 0.00 0.00 3.21
2098 2278 4.753516 TGTACTATCCTTGGTGATGTGG 57.246 45.455 0.00 0.00 0.00 4.17
2099 2279 4.101114 TGTACTATCCTTGGTGATGTGGT 58.899 43.478 0.00 0.00 0.00 4.16
2100 2280 3.634397 ACTATCCTTGGTGATGTGGTG 57.366 47.619 0.00 0.00 0.00 4.17
2101 2281 2.912956 ACTATCCTTGGTGATGTGGTGT 59.087 45.455 0.00 0.00 0.00 4.16
2102 2282 2.496899 ATCCTTGGTGATGTGGTGTC 57.503 50.000 0.00 0.00 0.00 3.67
2103 2283 1.434188 TCCTTGGTGATGTGGTGTCT 58.566 50.000 0.00 0.00 0.00 3.41
2104 2284 1.072173 TCCTTGGTGATGTGGTGTCTG 59.928 52.381 0.00 0.00 0.00 3.51
2105 2285 1.072173 CCTTGGTGATGTGGTGTCTGA 59.928 52.381 0.00 0.00 0.00 3.27
2106 2286 2.420642 CTTGGTGATGTGGTGTCTGAG 58.579 52.381 0.00 0.00 0.00 3.35
2107 2287 0.686789 TGGTGATGTGGTGTCTGAGG 59.313 55.000 0.00 0.00 0.00 3.86
2108 2288 0.976641 GGTGATGTGGTGTCTGAGGA 59.023 55.000 0.00 0.00 0.00 3.71
2109 2289 1.066573 GGTGATGTGGTGTCTGAGGAG 60.067 57.143 0.00 0.00 0.00 3.69
2110 2290 1.620819 GTGATGTGGTGTCTGAGGAGT 59.379 52.381 0.00 0.00 0.00 3.85
2111 2291 2.826128 GTGATGTGGTGTCTGAGGAGTA 59.174 50.000 0.00 0.00 0.00 2.59
2112 2292 3.092301 TGATGTGGTGTCTGAGGAGTAG 58.908 50.000 0.00 0.00 0.00 2.57
2113 2293 2.971901 TGTGGTGTCTGAGGAGTAGA 57.028 50.000 0.00 0.00 0.00 2.59
2114 2294 2.796557 TGTGGTGTCTGAGGAGTAGAG 58.203 52.381 0.00 0.00 0.00 2.43
2115 2295 2.108425 TGTGGTGTCTGAGGAGTAGAGT 59.892 50.000 0.00 0.00 0.00 3.24
2116 2296 2.490115 GTGGTGTCTGAGGAGTAGAGTG 59.510 54.545 0.00 0.00 0.00 3.51
2117 2297 1.474879 GGTGTCTGAGGAGTAGAGTGC 59.525 57.143 0.00 0.00 0.00 4.40
2118 2298 1.474879 GTGTCTGAGGAGTAGAGTGCC 59.525 57.143 0.00 0.00 0.00 5.01
2119 2299 1.356059 TGTCTGAGGAGTAGAGTGCCT 59.644 52.381 0.00 0.00 33.97 4.75
2120 2300 2.225142 TGTCTGAGGAGTAGAGTGCCTT 60.225 50.000 0.00 0.00 30.70 4.35
2121 2301 2.829120 GTCTGAGGAGTAGAGTGCCTTT 59.171 50.000 0.00 0.00 30.70 3.11
2122 2302 2.828520 TCTGAGGAGTAGAGTGCCTTTG 59.171 50.000 0.00 0.00 30.70 2.77
2123 2303 2.564947 CTGAGGAGTAGAGTGCCTTTGT 59.435 50.000 0.00 0.00 30.70 2.83
2124 2304 2.563179 TGAGGAGTAGAGTGCCTTTGTC 59.437 50.000 0.00 0.00 30.70 3.18
2125 2305 1.903183 AGGAGTAGAGTGCCTTTGTCC 59.097 52.381 0.00 0.00 0.00 4.02
2126 2306 1.066071 GGAGTAGAGTGCCTTTGTCCC 60.066 57.143 0.00 0.00 0.00 4.46
2127 2307 0.984995 AGTAGAGTGCCTTTGTCCCC 59.015 55.000 0.00 0.00 0.00 4.81
2128 2308 0.391263 GTAGAGTGCCTTTGTCCCCG 60.391 60.000 0.00 0.00 0.00 5.73
2129 2309 1.550130 TAGAGTGCCTTTGTCCCCGG 61.550 60.000 0.00 0.00 0.00 5.73
2130 2310 3.920093 GAGTGCCTTTGTCCCCGGG 62.920 68.421 15.80 15.80 0.00 5.73
2131 2311 3.961414 GTGCCTTTGTCCCCGGGA 61.961 66.667 26.32 0.34 0.00 5.14
2132 2312 3.646715 TGCCTTTGTCCCCGGGAG 61.647 66.667 26.32 12.97 29.39 4.30
2144 2324 3.554716 CGGGAGGCTCATCATGGA 58.445 61.111 17.69 0.00 0.00 3.41
2145 2325 2.064628 CGGGAGGCTCATCATGGAT 58.935 57.895 17.69 0.00 0.00 3.41
2146 2326 1.269958 CGGGAGGCTCATCATGGATA 58.730 55.000 17.69 0.00 0.00 2.59
2147 2327 1.625315 CGGGAGGCTCATCATGGATAA 59.375 52.381 17.69 0.00 0.00 1.75
2148 2328 2.238144 CGGGAGGCTCATCATGGATAAT 59.762 50.000 17.69 0.00 0.00 1.28
2149 2329 3.618351 GGGAGGCTCATCATGGATAATG 58.382 50.000 17.69 0.00 37.66 1.90
2150 2330 3.015327 GGAGGCTCATCATGGATAATGC 58.985 50.000 17.69 0.00 36.11 3.56
2151 2331 3.015327 GAGGCTCATCATGGATAATGCC 58.985 50.000 10.25 0.00 39.40 4.40
2152 2332 2.097825 GGCTCATCATGGATAATGCCC 58.902 52.381 0.00 0.00 36.11 5.36
2153 2333 2.291411 GGCTCATCATGGATAATGCCCT 60.291 50.000 0.00 0.00 36.11 5.19
2154 2334 3.015327 GCTCATCATGGATAATGCCCTC 58.985 50.000 0.00 0.00 36.11 4.30
2155 2335 3.560668 GCTCATCATGGATAATGCCCTCA 60.561 47.826 0.00 0.00 36.11 3.86
2156 2336 4.856509 CTCATCATGGATAATGCCCTCAT 58.143 43.478 0.00 0.00 36.11 2.90
2157 2337 5.262009 CTCATCATGGATAATGCCCTCATT 58.738 41.667 0.00 0.00 44.52 2.57
2158 2338 5.014202 TCATCATGGATAATGCCCTCATTG 58.986 41.667 0.00 0.00 42.50 2.82
2159 2339 3.159472 TCATGGATAATGCCCTCATTGC 58.841 45.455 0.00 0.00 42.50 3.56
2160 2340 2.752075 TGGATAATGCCCTCATTGCA 57.248 45.000 1.17 0.00 42.50 4.08
2165 2345 3.500331 ATGCCCTCATTGCATTCGA 57.500 47.368 0.00 0.00 46.91 3.71
2166 2346 1.315690 ATGCCCTCATTGCATTCGAG 58.684 50.000 0.00 0.00 46.91 4.04
2167 2347 0.035152 TGCCCTCATTGCATTCGAGT 60.035 50.000 0.00 0.00 32.85 4.18
2168 2348 0.379669 GCCCTCATTGCATTCGAGTG 59.620 55.000 3.12 3.12 0.00 3.51
2169 2349 1.742761 CCCTCATTGCATTCGAGTGT 58.257 50.000 9.83 0.00 0.00 3.55
2170 2350 2.905075 CCCTCATTGCATTCGAGTGTA 58.095 47.619 9.83 1.73 0.00 2.90
2171 2351 2.609459 CCCTCATTGCATTCGAGTGTAC 59.391 50.000 9.83 0.00 0.00 2.90
2172 2352 3.261580 CCTCATTGCATTCGAGTGTACA 58.738 45.455 9.83 0.00 0.00 2.90
2173 2353 3.062639 CCTCATTGCATTCGAGTGTACAC 59.937 47.826 18.56 18.56 0.00 2.90
2174 2354 3.658709 TCATTGCATTCGAGTGTACACA 58.341 40.909 27.06 7.50 0.00 3.72
2175 2355 3.431912 TCATTGCATTCGAGTGTACACAC 59.568 43.478 27.06 19.95 46.77 3.82
2189 2369 6.401047 GTGTACACACTATATAAGGCAGGA 57.599 41.667 21.14 0.00 43.25 3.86
2190 2370 6.812998 GTGTACACACTATATAAGGCAGGAA 58.187 40.000 21.14 0.00 43.25 3.36
2191 2371 7.270047 GTGTACACACTATATAAGGCAGGAAA 58.730 38.462 21.14 0.00 43.25 3.13
2192 2372 7.767198 GTGTACACACTATATAAGGCAGGAAAA 59.233 37.037 21.14 0.00 43.25 2.29
2193 2373 7.985184 TGTACACACTATATAAGGCAGGAAAAG 59.015 37.037 0.00 0.00 0.00 2.27
2194 2374 6.357367 ACACACTATATAAGGCAGGAAAAGG 58.643 40.000 0.00 0.00 0.00 3.11
2195 2375 6.157994 ACACACTATATAAGGCAGGAAAAGGA 59.842 38.462 0.00 0.00 0.00 3.36
2196 2376 7.147302 ACACACTATATAAGGCAGGAAAAGGAT 60.147 37.037 0.00 0.00 0.00 3.24
2197 2377 7.389053 CACACTATATAAGGCAGGAAAAGGATC 59.611 40.741 0.00 0.00 0.00 3.36
2198 2378 6.881602 CACTATATAAGGCAGGAAAAGGATCC 59.118 42.308 2.48 2.48 39.96 3.36
2199 2379 2.710096 TAAGGCAGGAAAAGGATCCG 57.290 50.000 5.98 0.00 44.60 4.18
2200 2380 0.034089 AAGGCAGGAAAAGGATCCGG 60.034 55.000 5.98 0.00 44.60 5.14
2201 2381 0.914417 AGGCAGGAAAAGGATCCGGA 60.914 55.000 6.61 6.61 44.60 5.14
2202 2382 0.464554 GGCAGGAAAAGGATCCGGAG 60.465 60.000 11.34 0.00 44.60 4.63
2203 2383 0.541863 GCAGGAAAAGGATCCGGAGA 59.458 55.000 11.34 0.00 44.60 3.71
2204 2384 1.474143 GCAGGAAAAGGATCCGGAGAG 60.474 57.143 11.34 0.00 44.60 3.20
2205 2385 1.139853 CAGGAAAAGGATCCGGAGAGG 59.860 57.143 11.34 0.00 44.60 3.69
2215 2395 2.543777 TCCGGAGAGGAGTTTTTGTG 57.456 50.000 0.00 0.00 45.98 3.33
2216 2396 0.875059 CCGGAGAGGAGTTTTTGTGC 59.125 55.000 0.00 0.00 45.00 4.57
2217 2397 1.543429 CCGGAGAGGAGTTTTTGTGCT 60.543 52.381 0.00 0.00 45.00 4.40
2218 2398 2.222027 CGGAGAGGAGTTTTTGTGCTT 58.778 47.619 0.00 0.00 0.00 3.91
2219 2399 3.399330 CGGAGAGGAGTTTTTGTGCTTA 58.601 45.455 0.00 0.00 0.00 3.09
2220 2400 3.186613 CGGAGAGGAGTTTTTGTGCTTAC 59.813 47.826 0.00 0.00 0.00 2.34
2221 2401 4.134563 GGAGAGGAGTTTTTGTGCTTACA 58.865 43.478 0.00 0.00 0.00 2.41
2222 2402 4.578928 GGAGAGGAGTTTTTGTGCTTACAA 59.421 41.667 0.00 0.00 0.00 2.41
2223 2403 5.278022 GGAGAGGAGTTTTTGTGCTTACAAG 60.278 44.000 0.00 0.00 0.00 3.16
2241 2421 2.355010 AGCTGGACTTGTCAAAAGCT 57.645 45.000 14.71 14.71 36.21 3.74
2242 2422 2.659428 AGCTGGACTTGTCAAAAGCTT 58.341 42.857 14.71 0.00 37.74 3.74
2243 2423 3.820557 AGCTGGACTTGTCAAAAGCTTA 58.179 40.909 0.00 0.00 37.74 3.09
2244 2424 3.565902 AGCTGGACTTGTCAAAAGCTTAC 59.434 43.478 0.00 0.00 37.74 2.34
2245 2425 3.607078 GCTGGACTTGTCAAAAGCTTACG 60.607 47.826 0.00 0.00 0.00 3.18
2246 2426 3.799366 TGGACTTGTCAAAAGCTTACGA 58.201 40.909 0.00 0.00 0.00 3.43
2247 2427 4.385825 TGGACTTGTCAAAAGCTTACGAT 58.614 39.130 0.00 0.00 0.00 3.73
2248 2428 5.543714 TGGACTTGTCAAAAGCTTACGATA 58.456 37.500 0.00 0.00 0.00 2.92
2249 2429 5.637810 TGGACTTGTCAAAAGCTTACGATAG 59.362 40.000 0.00 4.33 46.19 2.08
2250 2430 5.867716 GGACTTGTCAAAAGCTTACGATAGA 59.132 40.000 0.00 0.00 41.38 1.98
2251 2431 6.035112 GGACTTGTCAAAAGCTTACGATAGAG 59.965 42.308 0.00 2.28 41.38 2.43
2252 2432 6.456501 ACTTGTCAAAAGCTTACGATAGAGT 58.543 36.000 0.00 2.85 41.38 3.24
2253 2433 6.366332 ACTTGTCAAAAGCTTACGATAGAGTG 59.634 38.462 0.00 0.00 41.38 3.51
2254 2434 5.168569 TGTCAAAAGCTTACGATAGAGTGG 58.831 41.667 0.00 0.00 41.38 4.00
2255 2435 5.047590 TGTCAAAAGCTTACGATAGAGTGGA 60.048 40.000 0.00 0.00 41.38 4.02
2256 2436 6.043411 GTCAAAAGCTTACGATAGAGTGGAT 58.957 40.000 0.00 0.00 41.38 3.41
2257 2437 6.535508 GTCAAAAGCTTACGATAGAGTGGATT 59.464 38.462 0.00 0.00 41.38 3.01
2258 2438 6.535150 TCAAAAGCTTACGATAGAGTGGATTG 59.465 38.462 0.00 0.00 41.38 2.67
2259 2439 4.592485 AGCTTACGATAGAGTGGATTGG 57.408 45.455 0.00 0.00 41.38 3.16
2260 2440 4.215908 AGCTTACGATAGAGTGGATTGGA 58.784 43.478 0.00 0.00 41.38 3.53
2261 2441 4.279671 AGCTTACGATAGAGTGGATTGGAG 59.720 45.833 0.00 0.00 41.38 3.86
2262 2442 4.278669 GCTTACGATAGAGTGGATTGGAGA 59.721 45.833 0.00 0.00 41.38 3.71
2263 2443 5.047660 GCTTACGATAGAGTGGATTGGAGAT 60.048 44.000 0.00 0.00 41.38 2.75
2264 2444 6.517529 GCTTACGATAGAGTGGATTGGAGATT 60.518 42.308 0.00 0.00 41.38 2.40
2265 2445 5.461032 ACGATAGAGTGGATTGGAGATTC 57.539 43.478 0.00 0.00 41.38 2.52
2266 2446 4.282195 ACGATAGAGTGGATTGGAGATTCC 59.718 45.833 0.00 0.00 41.38 3.01
2267 2447 4.526262 CGATAGAGTGGATTGGAGATTCCT 59.474 45.833 0.00 0.00 36.04 3.36
2268 2448 5.336372 CGATAGAGTGGATTGGAGATTCCTC 60.336 48.000 0.00 0.00 36.04 3.71
2269 2449 3.729108 AGAGTGGATTGGAGATTCCTCA 58.271 45.455 0.00 0.00 41.20 3.86
2270 2450 4.107072 AGAGTGGATTGGAGATTCCTCAA 58.893 43.478 0.00 0.00 41.20 3.02
2271 2451 4.163839 AGAGTGGATTGGAGATTCCTCAAG 59.836 45.833 0.00 0.00 41.20 3.02
2272 2452 2.948315 GTGGATTGGAGATTCCTCAAGC 59.052 50.000 0.00 0.00 41.20 4.01
2273 2453 2.577563 TGGATTGGAGATTCCTCAAGCA 59.422 45.455 7.01 0.00 41.20 3.91
2274 2454 3.010472 TGGATTGGAGATTCCTCAAGCAA 59.990 43.478 7.01 0.00 41.20 3.91
2275 2455 4.019174 GGATTGGAGATTCCTCAAGCAAA 58.981 43.478 7.01 0.00 41.20 3.68
2276 2456 4.648307 GGATTGGAGATTCCTCAAGCAAAT 59.352 41.667 7.01 0.00 41.20 2.32
2277 2457 5.451520 GGATTGGAGATTCCTCAAGCAAATG 60.452 44.000 7.01 0.00 41.20 2.32
2278 2458 4.305539 TGGAGATTCCTCAAGCAAATGA 57.694 40.909 0.00 0.00 41.20 2.57
2279 2459 4.863548 TGGAGATTCCTCAAGCAAATGAT 58.136 39.130 0.00 0.00 41.20 2.45
2280 2460 4.643334 TGGAGATTCCTCAAGCAAATGATG 59.357 41.667 0.00 0.00 41.20 3.07
2281 2461 4.608951 GAGATTCCTCAAGCAAATGATGC 58.391 43.478 0.00 0.00 45.90 3.91
2282 2462 4.097437 GAGATTCCTCAAGCAAATGATGCA 59.903 41.667 3.01 0.00 46.90 3.96
2283 2463 5.733655 GAGATTCCTCAAGCAAATGATGCAG 60.734 44.000 3.01 0.00 46.90 4.41
2284 2464 7.847531 GAGATTCCTCAAGCAAATGATGCAGA 61.848 42.308 3.01 0.00 46.90 4.26
2293 2473 4.730949 CAAATGATGCAGAGAATGGGTT 57.269 40.909 0.00 0.00 0.00 4.11
2294 2474 5.080969 CAAATGATGCAGAGAATGGGTTT 57.919 39.130 0.00 0.00 0.00 3.27
2295 2475 5.484715 CAAATGATGCAGAGAATGGGTTTT 58.515 37.500 0.00 0.00 0.00 2.43
2296 2476 4.730949 ATGATGCAGAGAATGGGTTTTG 57.269 40.909 0.00 0.00 0.00 2.44
2297 2477 2.231964 TGATGCAGAGAATGGGTTTTGC 59.768 45.455 0.00 0.00 0.00 3.68
2298 2478 0.597568 TGCAGAGAATGGGTTTTGCG 59.402 50.000 0.00 0.00 34.44 4.85
2299 2479 0.881118 GCAGAGAATGGGTTTTGCGA 59.119 50.000 0.00 0.00 0.00 5.10
2300 2480 1.135575 GCAGAGAATGGGTTTTGCGAG 60.136 52.381 0.00 0.00 0.00 5.03
2301 2481 1.135575 CAGAGAATGGGTTTTGCGAGC 60.136 52.381 0.00 0.00 0.00 5.03
2302 2482 0.171231 GAGAATGGGTTTTGCGAGCC 59.829 55.000 0.00 0.00 37.70 4.70
2305 2485 4.189539 TGGGTTTTGCGAGCCAAT 57.810 50.000 3.35 0.00 43.72 3.16
2306 2486 1.664873 TGGGTTTTGCGAGCCAATG 59.335 52.632 3.35 0.00 43.72 2.82
2307 2487 1.079888 GGGTTTTGCGAGCCAATGG 60.080 57.895 0.00 0.00 37.16 3.16
2308 2488 1.079888 GGTTTTGCGAGCCAATGGG 60.080 57.895 0.00 0.00 32.49 4.00
2309 2489 1.665442 GTTTTGCGAGCCAATGGGT 59.335 52.632 2.51 2.51 36.17 4.51
2310 2490 0.667184 GTTTTGCGAGCCAATGGGTG 60.667 55.000 9.44 2.48 36.17 4.61
2311 2491 0.825425 TTTTGCGAGCCAATGGGTGA 60.825 50.000 9.44 0.00 36.17 4.02
2312 2492 0.825425 TTTGCGAGCCAATGGGTGAA 60.825 50.000 9.44 0.00 36.17 3.18
2313 2493 1.243342 TTGCGAGCCAATGGGTGAAG 61.243 55.000 9.44 0.97 36.17 3.02
2314 2494 1.675641 GCGAGCCAATGGGTGAAGT 60.676 57.895 9.44 0.00 36.17 3.01
2315 2495 1.926511 GCGAGCCAATGGGTGAAGTG 61.927 60.000 9.44 0.00 36.17 3.16
2316 2496 1.308069 CGAGCCAATGGGTGAAGTGG 61.308 60.000 9.44 0.00 36.17 4.00
2317 2497 0.038166 GAGCCAATGGGTGAAGTGGA 59.962 55.000 9.44 0.00 36.17 4.02
2318 2498 0.706433 AGCCAATGGGTGAAGTGGAT 59.294 50.000 1.92 0.00 36.17 3.41
2319 2499 1.106285 GCCAATGGGTGAAGTGGATC 58.894 55.000 0.00 0.00 36.17 3.36
2320 2500 1.616725 GCCAATGGGTGAAGTGGATCA 60.617 52.381 0.00 0.00 36.17 2.92
2321 2501 2.951787 GCCAATGGGTGAAGTGGATCAT 60.952 50.000 0.00 0.00 36.17 2.45
2322 2502 2.691526 CCAATGGGTGAAGTGGATCATG 59.308 50.000 0.00 0.00 32.54 3.07
2323 2503 2.691526 CAATGGGTGAAGTGGATCATGG 59.308 50.000 0.00 0.00 0.00 3.66
2324 2504 0.034186 TGGGTGAAGTGGATCATGGC 60.034 55.000 0.00 0.00 0.00 4.40
2325 2505 0.034186 GGGTGAAGTGGATCATGGCA 60.034 55.000 0.00 0.00 0.00 4.92
2326 2506 1.410648 GGGTGAAGTGGATCATGGCAT 60.411 52.381 0.00 0.00 0.00 4.40
2327 2507 1.679680 GGTGAAGTGGATCATGGCATG 59.320 52.381 21.42 21.42 0.00 4.06
2328 2508 2.372264 GTGAAGTGGATCATGGCATGT 58.628 47.619 25.62 13.94 0.00 3.21
2329 2509 2.098607 GTGAAGTGGATCATGGCATGTG 59.901 50.000 25.62 4.41 0.00 3.21
2330 2510 2.291089 TGAAGTGGATCATGGCATGTGT 60.291 45.455 25.62 16.19 0.00 3.72
2331 2511 2.048444 AGTGGATCATGGCATGTGTC 57.952 50.000 25.62 22.30 0.00 3.67
2332 2512 1.282738 AGTGGATCATGGCATGTGTCA 59.717 47.619 25.62 18.11 0.00 3.58
2333 2513 1.402968 GTGGATCATGGCATGTGTCAC 59.597 52.381 25.62 23.75 29.57 3.67
2334 2514 1.027357 GGATCATGGCATGTGTCACC 58.973 55.000 25.62 17.64 29.57 4.02
2335 2515 1.409241 GGATCATGGCATGTGTCACCT 60.409 52.381 25.62 4.69 29.57 4.00
2336 2516 1.945394 GATCATGGCATGTGTCACCTC 59.055 52.381 25.62 9.51 29.57 3.85
2337 2517 0.391528 TCATGGCATGTGTCACCTCG 60.392 55.000 25.62 0.00 29.57 4.63
2338 2518 1.078214 ATGGCATGTGTCACCTCGG 60.078 57.895 0.00 0.00 29.57 4.63
2339 2519 1.841302 ATGGCATGTGTCACCTCGGT 61.841 55.000 0.00 0.00 29.57 4.69
2340 2520 1.302511 GGCATGTGTCACCTCGGTT 60.303 57.895 0.00 0.00 0.00 4.44
2341 2521 1.298859 GGCATGTGTCACCTCGGTTC 61.299 60.000 0.00 0.00 0.00 3.62
2342 2522 1.626654 GCATGTGTCACCTCGGTTCG 61.627 60.000 0.00 0.00 0.00 3.95
2343 2523 1.014044 CATGTGTCACCTCGGTTCGG 61.014 60.000 0.00 0.00 0.00 4.30
2344 2524 1.469335 ATGTGTCACCTCGGTTCGGT 61.469 55.000 0.00 0.00 34.38 4.69
2345 2525 0.822944 TGTGTCACCTCGGTTCGGTA 60.823 55.000 0.00 0.00 32.37 4.02
2346 2526 0.529378 GTGTCACCTCGGTTCGGTAT 59.471 55.000 0.00 0.00 32.37 2.73
2347 2527 1.067354 GTGTCACCTCGGTTCGGTATT 60.067 52.381 0.00 0.00 32.37 1.89
2348 2528 1.067425 TGTCACCTCGGTTCGGTATTG 60.067 52.381 0.00 0.00 32.37 1.90
2349 2529 0.108520 TCACCTCGGTTCGGTATTGC 60.109 55.000 0.00 0.00 32.37 3.56
2350 2530 0.390603 CACCTCGGTTCGGTATTGCA 60.391 55.000 0.00 0.00 32.37 4.08
2351 2531 0.539986 ACCTCGGTTCGGTATTGCAT 59.460 50.000 0.00 0.00 31.69 3.96
2352 2532 1.758280 ACCTCGGTTCGGTATTGCATA 59.242 47.619 0.00 0.00 31.69 3.14
2353 2533 2.168936 ACCTCGGTTCGGTATTGCATAA 59.831 45.455 0.00 0.00 31.69 1.90
2354 2534 3.199677 CCTCGGTTCGGTATTGCATAAA 58.800 45.455 0.00 0.00 0.00 1.40
2355 2535 3.813166 CCTCGGTTCGGTATTGCATAAAT 59.187 43.478 0.00 0.00 0.00 1.40
2356 2536 4.084013 CCTCGGTTCGGTATTGCATAAATC 60.084 45.833 0.00 0.00 0.00 2.17
2357 2537 4.699637 TCGGTTCGGTATTGCATAAATCT 58.300 39.130 0.00 0.00 0.00 2.40
2358 2538 5.120399 TCGGTTCGGTATTGCATAAATCTT 58.880 37.500 0.00 0.00 0.00 2.40
2359 2539 6.282167 TCGGTTCGGTATTGCATAAATCTTA 58.718 36.000 0.00 0.00 0.00 2.10
2360 2540 6.762187 TCGGTTCGGTATTGCATAAATCTTAA 59.238 34.615 0.00 0.00 0.00 1.85
2361 2541 6.849305 CGGTTCGGTATTGCATAAATCTTAAC 59.151 38.462 0.00 0.00 0.00 2.01
2362 2542 6.849305 GGTTCGGTATTGCATAAATCTTAACG 59.151 38.462 0.00 0.00 0.00 3.18
2363 2543 6.533819 TCGGTATTGCATAAATCTTAACGG 57.466 37.500 0.00 0.00 0.00 4.44
2364 2544 6.282167 TCGGTATTGCATAAATCTTAACGGA 58.718 36.000 0.00 0.00 0.00 4.69
2365 2545 6.762187 TCGGTATTGCATAAATCTTAACGGAA 59.238 34.615 0.00 0.00 0.00 4.30
2366 2546 6.849305 CGGTATTGCATAAATCTTAACGGAAC 59.151 38.462 0.00 0.00 0.00 3.62
2367 2547 7.136772 GGTATTGCATAAATCTTAACGGAACC 58.863 38.462 0.00 0.00 0.00 3.62
2368 2548 5.570234 TTGCATAAATCTTAACGGAACCC 57.430 39.130 0.00 0.00 0.00 4.11
2369 2549 4.850680 TGCATAAATCTTAACGGAACCCT 58.149 39.130 0.00 0.00 0.00 4.34
2370 2550 4.879545 TGCATAAATCTTAACGGAACCCTC 59.120 41.667 0.00 0.00 0.00 4.30
2371 2551 5.123936 GCATAAATCTTAACGGAACCCTCT 58.876 41.667 0.00 0.00 0.00 3.69
2372 2552 5.589050 GCATAAATCTTAACGGAACCCTCTT 59.411 40.000 0.00 0.00 0.00 2.85
2373 2553 6.764560 GCATAAATCTTAACGGAACCCTCTTA 59.235 38.462 0.00 0.00 0.00 2.10
2374 2554 7.041984 GCATAAATCTTAACGGAACCCTCTTAG 60.042 40.741 0.00 0.00 0.00 2.18
2375 2555 6.616237 AAATCTTAACGGAACCCTCTTAGA 57.384 37.500 0.00 0.00 0.00 2.10
2376 2556 6.809976 AATCTTAACGGAACCCTCTTAGAT 57.190 37.500 0.00 0.00 0.00 1.98
2377 2557 6.809976 ATCTTAACGGAACCCTCTTAGATT 57.190 37.500 0.00 0.00 0.00 2.40
2378 2558 6.218108 TCTTAACGGAACCCTCTTAGATTC 57.782 41.667 0.00 0.00 0.00 2.52
2379 2559 3.521947 AACGGAACCCTCTTAGATTCG 57.478 47.619 0.00 0.00 0.00 3.34
2380 2560 2.454538 ACGGAACCCTCTTAGATTCGT 58.545 47.619 0.00 0.00 0.00 3.85
2381 2561 2.830321 ACGGAACCCTCTTAGATTCGTT 59.170 45.455 0.00 0.00 0.00 3.85
2382 2562 3.260128 ACGGAACCCTCTTAGATTCGTTT 59.740 43.478 0.00 0.00 0.00 3.60
2383 2563 3.617263 CGGAACCCTCTTAGATTCGTTTG 59.383 47.826 0.00 0.00 0.00 2.93
2384 2564 3.374367 GGAACCCTCTTAGATTCGTTTGC 59.626 47.826 0.00 0.00 0.00 3.68
2385 2565 3.695830 ACCCTCTTAGATTCGTTTGCA 57.304 42.857 0.00 0.00 0.00 4.08
2386 2566 3.335579 ACCCTCTTAGATTCGTTTGCAC 58.664 45.455 0.00 0.00 0.00 4.57
2387 2567 2.678336 CCCTCTTAGATTCGTTTGCACC 59.322 50.000 0.00 0.00 0.00 5.01
2388 2568 2.348666 CCTCTTAGATTCGTTTGCACCG 59.651 50.000 0.00 0.00 0.00 4.94
2389 2569 3.250744 CTCTTAGATTCGTTTGCACCGA 58.749 45.455 3.66 3.66 0.00 4.69
2390 2570 2.991190 TCTTAGATTCGTTTGCACCGAC 59.009 45.455 7.13 0.00 33.41 4.79
2391 2571 1.342555 TAGATTCGTTTGCACCGACG 58.657 50.000 7.13 8.39 40.43 5.12
2392 2572 1.509162 GATTCGTTTGCACCGACGC 60.509 57.895 7.13 0.00 39.03 5.19
2393 2573 3.289816 ATTCGTTTGCACCGACGCG 62.290 57.895 3.53 3.53 39.03 6.01
2412 2592 3.483869 GGGCTTCGGCAGGGAGAT 61.484 66.667 0.00 0.00 43.96 2.75
2413 2593 2.110006 GGCTTCGGCAGGGAGATC 59.890 66.667 0.00 0.00 43.96 2.75
2414 2594 2.110006 GCTTCGGCAGGGAGATCC 59.890 66.667 0.00 0.00 41.33 3.36
2424 2604 4.863107 GGAGATCCCCTTTCCCCT 57.137 61.111 0.00 0.00 0.00 4.79
2425 2605 3.044703 GGAGATCCCCTTTCCCCTT 57.955 57.895 0.00 0.00 0.00 3.95
2426 2606 1.309876 GGAGATCCCCTTTCCCCTTT 58.690 55.000 0.00 0.00 0.00 3.11
2427 2607 1.215673 GGAGATCCCCTTTCCCCTTTC 59.784 57.143 0.00 0.00 0.00 2.62
2428 2608 2.209758 GAGATCCCCTTTCCCCTTTCT 58.790 52.381 0.00 0.00 0.00 2.52
2429 2609 2.583101 GAGATCCCCTTTCCCCTTTCTT 59.417 50.000 0.00 0.00 0.00 2.52
2430 2610 3.786450 GAGATCCCCTTTCCCCTTTCTTA 59.214 47.826 0.00 0.00 0.00 2.10
2431 2611 4.393725 AGATCCCCTTTCCCCTTTCTTAT 58.606 43.478 0.00 0.00 0.00 1.73
2432 2612 4.801802 AGATCCCCTTTCCCCTTTCTTATT 59.198 41.667 0.00 0.00 0.00 1.40
2433 2613 4.603094 TCCCCTTTCCCCTTTCTTATTC 57.397 45.455 0.00 0.00 0.00 1.75
2434 2614 3.271225 TCCCCTTTCCCCTTTCTTATTCC 59.729 47.826 0.00 0.00 0.00 3.01
2435 2615 3.272285 CCCCTTTCCCCTTTCTTATTCCT 59.728 47.826 0.00 0.00 0.00 3.36
2436 2616 4.537751 CCCTTTCCCCTTTCTTATTCCTC 58.462 47.826 0.00 0.00 0.00 3.71
2437 2617 4.230733 CCCTTTCCCCTTTCTTATTCCTCT 59.769 45.833 0.00 0.00 0.00 3.69
2438 2618 5.281769 CCCTTTCCCCTTTCTTATTCCTCTT 60.282 44.000 0.00 0.00 0.00 2.85
2439 2619 6.069029 CCCTTTCCCCTTTCTTATTCCTCTTA 60.069 42.308 0.00 0.00 0.00 2.10
2440 2620 7.057264 CCTTTCCCCTTTCTTATTCCTCTTAG 58.943 42.308 0.00 0.00 0.00 2.18
2441 2621 7.311992 CCTTTCCCCTTTCTTATTCCTCTTAGT 60.312 40.741 0.00 0.00 0.00 2.24
2442 2622 6.561519 TCCCCTTTCTTATTCCTCTTAGTG 57.438 41.667 0.00 0.00 0.00 2.74
2443 2623 5.428783 TCCCCTTTCTTATTCCTCTTAGTGG 59.571 44.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
124 126 0.810031 ATGTTGACCCGCTATGACGC 60.810 55.000 0.00 0.00 0.00 5.19
132 137 2.032030 CCATTAATCGATGTTGACCCGC 60.032 50.000 0.00 0.00 0.00 6.13
150 155 3.745480 CGCTTATGACCACTTGATCCCAT 60.745 47.826 0.00 0.00 0.00 4.00
234 242 2.530177 GATGACTTGCACGAATCTCGA 58.470 47.619 2.59 0.00 43.74 4.04
368 376 6.920569 ATGAGGTTAACAATATCGTCCAAC 57.079 37.500 8.10 0.00 0.00 3.77
388 396 7.071824 ACCCCCAAAGAAAGAAAAATACAATGA 59.928 33.333 0.00 0.00 0.00 2.57
389 397 7.223584 ACCCCCAAAGAAAGAAAAATACAATG 58.776 34.615 0.00 0.00 0.00 2.82
390 398 7.292356 AGACCCCCAAAGAAAGAAAAATACAAT 59.708 33.333 0.00 0.00 0.00 2.71
391 399 6.613679 AGACCCCCAAAGAAAGAAAAATACAA 59.386 34.615 0.00 0.00 0.00 2.41
392 400 6.140377 AGACCCCCAAAGAAAGAAAAATACA 58.860 36.000 0.00 0.00 0.00 2.29
393 401 6.665992 AGACCCCCAAAGAAAGAAAAATAC 57.334 37.500 0.00 0.00 0.00 1.89
394 402 7.684317 AAAGACCCCCAAAGAAAGAAAAATA 57.316 32.000 0.00 0.00 0.00 1.40
395 403 6.575244 AAAGACCCCCAAAGAAAGAAAAAT 57.425 33.333 0.00 0.00 0.00 1.82
396 404 6.381498 AAAAGACCCCCAAAGAAAGAAAAA 57.619 33.333 0.00 0.00 0.00 1.94
397 405 5.394773 CGAAAAGACCCCCAAAGAAAGAAAA 60.395 40.000 0.00 0.00 0.00 2.29
398 406 4.098807 CGAAAAGACCCCCAAAGAAAGAAA 59.901 41.667 0.00 0.00 0.00 2.52
399 407 3.634910 CGAAAAGACCCCCAAAGAAAGAA 59.365 43.478 0.00 0.00 0.00 2.52
400 408 3.219281 CGAAAAGACCCCCAAAGAAAGA 58.781 45.455 0.00 0.00 0.00 2.52
401 409 2.288213 GCGAAAAGACCCCCAAAGAAAG 60.288 50.000 0.00 0.00 0.00 2.62
402 410 1.684450 GCGAAAAGACCCCCAAAGAAA 59.316 47.619 0.00 0.00 0.00 2.52
403 411 1.324383 GCGAAAAGACCCCCAAAGAA 58.676 50.000 0.00 0.00 0.00 2.52
404 412 0.183971 TGCGAAAAGACCCCCAAAGA 59.816 50.000 0.00 0.00 0.00 2.52
405 413 1.067635 CATGCGAAAAGACCCCCAAAG 60.068 52.381 0.00 0.00 0.00 2.77
406 414 0.965439 CATGCGAAAAGACCCCCAAA 59.035 50.000 0.00 0.00 0.00 3.28
407 415 0.178975 ACATGCGAAAAGACCCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
408 416 0.893270 CACATGCGAAAAGACCCCCA 60.893 55.000 0.00 0.00 0.00 4.96
409 417 0.893727 ACACATGCGAAAAGACCCCC 60.894 55.000 0.00 0.00 0.00 5.40
410 418 0.240945 CACACATGCGAAAAGACCCC 59.759 55.000 0.00 0.00 0.00 4.95
411 419 0.951558 ACACACATGCGAAAAGACCC 59.048 50.000 0.00 0.00 0.00 4.46
412 420 2.384382 CAACACACATGCGAAAAGACC 58.616 47.619 0.00 0.00 0.00 3.85
413 421 2.384382 CCAACACACATGCGAAAAGAC 58.616 47.619 0.00 0.00 0.00 3.01
414 422 1.336440 CCCAACACACATGCGAAAAGA 59.664 47.619 0.00 0.00 0.00 2.52
415 423 1.336440 TCCCAACACACATGCGAAAAG 59.664 47.619 0.00 0.00 0.00 2.27
416 424 1.066303 GTCCCAACACACATGCGAAAA 59.934 47.619 0.00 0.00 0.00 2.29
417 425 0.665835 GTCCCAACACACATGCGAAA 59.334 50.000 0.00 0.00 0.00 3.46
418 426 0.464554 TGTCCCAACACACATGCGAA 60.465 50.000 0.00 0.00 0.00 4.70
419 427 1.147153 TGTCCCAACACACATGCGA 59.853 52.632 0.00 0.00 0.00 5.10
420 428 3.743208 TGTCCCAACACACATGCG 58.257 55.556 0.00 0.00 0.00 4.73
428 436 1.153329 GACCACACGTGTCCCAACA 60.153 57.895 20.49 0.00 0.00 3.33
429 437 0.878961 GAGACCACACGTGTCCCAAC 60.879 60.000 20.49 8.82 0.00 3.77
430 438 1.046472 AGAGACCACACGTGTCCCAA 61.046 55.000 20.49 0.00 35.32 4.12
431 439 1.456892 AGAGACCACACGTGTCCCA 60.457 57.895 20.49 0.00 35.32 4.37
432 440 1.289380 GAGAGACCACACGTGTCCC 59.711 63.158 20.49 10.69 35.32 4.46
433 441 0.039074 CTGAGAGACCACACGTGTCC 60.039 60.000 20.49 11.07 35.32 4.02
434 442 0.039074 CCTGAGAGACCACACGTGTC 60.039 60.000 20.49 8.11 34.95 3.67
435 443 1.464376 CCCTGAGAGACCACACGTGT 61.464 60.000 17.22 17.22 0.00 4.49
436 444 1.290324 CCCTGAGAGACCACACGTG 59.710 63.158 15.48 15.48 0.00 4.49
437 445 1.152525 ACCCTGAGAGACCACACGT 60.153 57.895 0.00 0.00 0.00 4.49
438 446 0.896019 AGACCCTGAGAGACCACACG 60.896 60.000 0.00 0.00 0.00 4.49
439 447 1.343069 AAGACCCTGAGAGACCACAC 58.657 55.000 0.00 0.00 0.00 3.82
440 448 1.971357 GAAAGACCCTGAGAGACCACA 59.029 52.381 0.00 0.00 0.00 4.17
441 449 1.067495 CGAAAGACCCTGAGAGACCAC 60.067 57.143 0.00 0.00 0.00 4.16
442 450 1.203013 TCGAAAGACCCTGAGAGACCA 60.203 52.381 0.00 0.00 33.31 4.02
443 451 1.546961 TCGAAAGACCCTGAGAGACC 58.453 55.000 0.00 0.00 33.31 3.85
455 463 1.080772 ACGCAGCATCGTCGAAAGA 60.081 52.632 0.00 0.00 38.44 2.52
456 464 3.463505 ACGCAGCATCGTCGAAAG 58.536 55.556 0.00 0.00 38.44 2.62
462 470 2.212900 TAGCACAGACGCAGCATCGT 62.213 55.000 2.89 2.89 46.38 3.73
463 471 1.517039 TAGCACAGACGCAGCATCG 60.517 57.895 0.00 0.00 0.00 3.84
464 472 0.737367 TGTAGCACAGACGCAGCATC 60.737 55.000 0.00 0.00 0.00 3.91
465 473 0.107993 ATGTAGCACAGACGCAGCAT 60.108 50.000 0.00 0.00 0.00 3.79
466 474 0.737367 GATGTAGCACAGACGCAGCA 60.737 55.000 0.00 0.00 0.00 4.41
467 475 0.459237 AGATGTAGCACAGACGCAGC 60.459 55.000 0.00 0.00 0.00 5.25
468 476 1.275505 CAGATGTAGCACAGACGCAG 58.724 55.000 0.00 0.00 0.00 5.18
469 477 0.603065 ACAGATGTAGCACAGACGCA 59.397 50.000 0.00 0.00 0.00 5.24
470 478 2.561733 TACAGATGTAGCACAGACGC 57.438 50.000 0.00 0.00 0.00 5.19
471 479 3.633235 GGATACAGATGTAGCACAGACG 58.367 50.000 10.14 0.00 38.56 4.18
472 480 3.066900 ACGGATACAGATGTAGCACAGAC 59.933 47.826 10.14 0.00 38.56 3.51
473 481 3.288092 ACGGATACAGATGTAGCACAGA 58.712 45.455 10.14 0.00 38.56 3.41
474 482 3.717400 ACGGATACAGATGTAGCACAG 57.283 47.619 10.14 3.97 38.56 3.66
475 483 4.159693 AGAAACGGATACAGATGTAGCACA 59.840 41.667 10.14 0.00 38.56 4.57
476 484 4.504461 CAGAAACGGATACAGATGTAGCAC 59.496 45.833 10.14 0.00 38.56 4.40
477 485 4.441495 CCAGAAACGGATACAGATGTAGCA 60.441 45.833 10.14 0.00 38.56 3.49
478 486 4.051922 CCAGAAACGGATACAGATGTAGC 58.948 47.826 0.00 0.00 36.28 3.58
479 487 5.515797 TCCAGAAACGGATACAGATGTAG 57.484 43.478 0.00 0.00 33.52 2.74
480 488 7.255836 CCTTATCCAGAAACGGATACAGATGTA 60.256 40.741 0.00 0.00 45.68 2.29
481 489 6.463049 CCTTATCCAGAAACGGATACAGATGT 60.463 42.308 0.00 0.00 45.68 3.06
482 490 5.928839 CCTTATCCAGAAACGGATACAGATG 59.071 44.000 0.00 0.00 45.68 2.90
483 491 5.602978 ACCTTATCCAGAAACGGATACAGAT 59.397 40.000 0.00 0.00 45.68 2.90
484 492 4.960469 ACCTTATCCAGAAACGGATACAGA 59.040 41.667 0.00 0.00 45.68 3.41
485 493 5.277857 ACCTTATCCAGAAACGGATACAG 57.722 43.478 0.00 2.08 45.68 2.74
486 494 5.687166 AACCTTATCCAGAAACGGATACA 57.313 39.130 0.00 0.00 45.68 2.29
487 495 8.557029 CATTAAACCTTATCCAGAAACGGATAC 58.443 37.037 0.00 0.00 45.68 2.24
488 496 7.227910 GCATTAAACCTTATCCAGAAACGGATA 59.772 37.037 0.00 0.00 44.26 2.59
490 498 5.355910 GCATTAAACCTTATCCAGAAACGGA 59.644 40.000 0.00 0.00 40.07 4.69
491 499 5.124776 TGCATTAAACCTTATCCAGAAACGG 59.875 40.000 0.00 0.00 0.00 4.44
492 500 6.128007 ACTGCATTAAACCTTATCCAGAAACG 60.128 38.462 0.00 0.00 0.00 3.60
493 501 7.158099 ACTGCATTAAACCTTATCCAGAAAC 57.842 36.000 0.00 0.00 0.00 2.78
494 502 9.474313 AATACTGCATTAAACCTTATCCAGAAA 57.526 29.630 0.00 0.00 0.00 2.52
495 503 9.120538 GAATACTGCATTAAACCTTATCCAGAA 57.879 33.333 0.00 0.00 0.00 3.02
496 504 8.494433 AGAATACTGCATTAAACCTTATCCAGA 58.506 33.333 0.00 0.00 0.00 3.86
497 505 8.682936 AGAATACTGCATTAAACCTTATCCAG 57.317 34.615 0.00 0.00 0.00 3.86
498 506 9.120538 GAAGAATACTGCATTAAACCTTATCCA 57.879 33.333 0.00 0.00 0.00 3.41
499 507 9.343539 AGAAGAATACTGCATTAAACCTTATCC 57.656 33.333 0.00 0.00 0.00 2.59
501 509 9.343539 GGAGAAGAATACTGCATTAAACCTTAT 57.656 33.333 0.00 0.00 0.00 1.73
502 510 8.325787 TGGAGAAGAATACTGCATTAAACCTTA 58.674 33.333 0.00 0.00 31.32 2.69
503 511 7.175104 TGGAGAAGAATACTGCATTAAACCTT 58.825 34.615 0.00 0.00 31.32 3.50
504 512 6.721318 TGGAGAAGAATACTGCATTAAACCT 58.279 36.000 0.00 0.00 31.32 3.50
505 513 7.391148 TTGGAGAAGAATACTGCATTAAACC 57.609 36.000 0.00 0.00 35.82 3.27
506 514 9.691362 TTTTTGGAGAAGAATACTGCATTAAAC 57.309 29.630 0.00 0.00 35.82 2.01
534 542 1.069823 TCGTGTGGGCATGCAATTTTT 59.930 42.857 21.36 0.00 0.00 1.94
535 543 0.678395 TCGTGTGGGCATGCAATTTT 59.322 45.000 21.36 0.00 0.00 1.82
536 544 0.038343 GTCGTGTGGGCATGCAATTT 60.038 50.000 21.36 0.00 0.00 1.82
559 567 3.792401 TGAGGGTATAGTTGTCATTGCG 58.208 45.455 0.00 0.00 0.00 4.85
560 568 3.561725 GCTGAGGGTATAGTTGTCATTGC 59.438 47.826 0.00 0.00 0.00 3.56
747 756 4.814041 GGAGGAGGGCAGGGCTCT 62.814 72.222 0.00 0.00 44.87 4.09
755 765 0.544223 GAAAGAGAAGGGAGGAGGGC 59.456 60.000 0.00 0.00 0.00 5.19
766 776 4.072131 CGGAGATTTTGGTGGAAAGAGAA 58.928 43.478 0.00 0.00 0.00 2.87
1118 1134 1.256361 CCTCAGCAGCTCCTGTCTCA 61.256 60.000 4.16 0.00 33.43 3.27
1135 1151 2.193536 GTTGGTGCGGCTTGTTCCT 61.194 57.895 0.00 0.00 0.00 3.36
1137 1153 1.008538 CAGTTGGTGCGGCTTGTTC 60.009 57.895 0.00 0.00 0.00 3.18
1440 1459 4.776322 CGGGCGTGCCTCCATCAA 62.776 66.667 11.25 0.00 36.10 2.57
1611 1630 8.742554 ACATGAAATTCTTAAACCGAAACATC 57.257 30.769 0.00 0.00 0.00 3.06
1612 1631 9.840427 CTACATGAAATTCTTAAACCGAAACAT 57.160 29.630 0.00 0.00 0.00 2.71
1646 1669 1.195115 TCTGATGCCGCTAGTTTCCT 58.805 50.000 0.00 0.00 0.00 3.36
1661 1684 7.069578 GGTACTACTACTCCCATGAAATTCTGA 59.930 40.741 0.00 0.00 0.00 3.27
1662 1685 7.147724 TGGTACTACTACTCCCATGAAATTCTG 60.148 40.741 0.00 0.00 0.00 3.02
1687 1710 6.133392 CGGACACACATGTTAAAAAGTACTG 58.867 40.000 0.00 0.00 39.95 2.74
1688 1711 5.818857 ACGGACACACATGTTAAAAAGTACT 59.181 36.000 0.00 0.00 39.95 2.73
1689 1712 6.018507 AGACGGACACACATGTTAAAAAGTAC 60.019 38.462 0.00 0.00 39.95 2.73
1704 1727 1.202348 CACATAGCAGAGACGGACACA 59.798 52.381 0.00 0.00 0.00 3.72
1707 1730 2.483583 CTCACATAGCAGAGACGGAC 57.516 55.000 0.00 0.00 33.74 4.79
1736 1759 4.561105 GGAGATCATATCGAACACCTTCC 58.439 47.826 0.00 0.00 0.00 3.46
1974 2154 5.126061 GTGCAAAATCAGAGTTGGATATGGT 59.874 40.000 0.00 0.00 0.00 3.55
2019 2199 5.043903 AGATAAATGGACAATCGAGACACG 58.956 41.667 0.00 0.00 44.09 4.49
2035 2215 6.660521 TGCAACAGATTCTTCACCAGATAAAT 59.339 34.615 0.00 0.00 0.00 1.40
2038 2218 5.164620 TGCAACAGATTCTTCACCAGATA 57.835 39.130 0.00 0.00 0.00 1.98
2068 2248 2.365617 CAAGGATAGTACATCGCCCTGT 59.634 50.000 0.00 0.00 0.00 4.00
2083 2263 1.988107 AGACACCACATCACCAAGGAT 59.012 47.619 0.00 0.00 0.00 3.24
2084 2264 1.072173 CAGACACCACATCACCAAGGA 59.928 52.381 0.00 0.00 0.00 3.36
2085 2265 1.072173 TCAGACACCACATCACCAAGG 59.928 52.381 0.00 0.00 0.00 3.61
2086 2266 2.420642 CTCAGACACCACATCACCAAG 58.579 52.381 0.00 0.00 0.00 3.61
2087 2267 1.072173 CCTCAGACACCACATCACCAA 59.928 52.381 0.00 0.00 0.00 3.67
2088 2268 0.686789 CCTCAGACACCACATCACCA 59.313 55.000 0.00 0.00 0.00 4.17
2089 2269 0.976641 TCCTCAGACACCACATCACC 59.023 55.000 0.00 0.00 0.00 4.02
2090 2270 1.620819 ACTCCTCAGACACCACATCAC 59.379 52.381 0.00 0.00 0.00 3.06
2091 2271 2.015456 ACTCCTCAGACACCACATCA 57.985 50.000 0.00 0.00 0.00 3.07
2092 2272 3.357203 TCTACTCCTCAGACACCACATC 58.643 50.000 0.00 0.00 0.00 3.06
2093 2273 3.245443 ACTCTACTCCTCAGACACCACAT 60.245 47.826 0.00 0.00 0.00 3.21
2094 2274 2.108425 ACTCTACTCCTCAGACACCACA 59.892 50.000 0.00 0.00 0.00 4.17
2095 2275 2.490115 CACTCTACTCCTCAGACACCAC 59.510 54.545 0.00 0.00 0.00 4.16
2096 2276 2.796557 CACTCTACTCCTCAGACACCA 58.203 52.381 0.00 0.00 0.00 4.17
2097 2277 1.474879 GCACTCTACTCCTCAGACACC 59.525 57.143 0.00 0.00 0.00 4.16
2098 2278 1.474879 GGCACTCTACTCCTCAGACAC 59.525 57.143 0.00 0.00 0.00 3.67
2099 2279 1.356059 AGGCACTCTACTCCTCAGACA 59.644 52.381 0.00 0.00 0.00 3.41
2100 2280 2.137810 AGGCACTCTACTCCTCAGAC 57.862 55.000 0.00 0.00 0.00 3.51
2101 2281 2.828520 CAAAGGCACTCTACTCCTCAGA 59.171 50.000 0.00 0.00 38.49 3.27
2102 2282 2.564947 ACAAAGGCACTCTACTCCTCAG 59.435 50.000 0.00 0.00 38.49 3.35
2103 2283 2.563179 GACAAAGGCACTCTACTCCTCA 59.437 50.000 0.00 0.00 38.49 3.86
2104 2284 2.093921 GGACAAAGGCACTCTACTCCTC 60.094 54.545 0.00 0.00 38.49 3.71
2105 2285 1.903183 GGACAAAGGCACTCTACTCCT 59.097 52.381 0.00 0.00 38.49 3.69
2106 2286 1.066071 GGGACAAAGGCACTCTACTCC 60.066 57.143 0.00 0.00 38.49 3.85
2107 2287 1.066071 GGGGACAAAGGCACTCTACTC 60.066 57.143 0.00 0.00 38.49 2.59
2108 2288 0.984995 GGGGACAAAGGCACTCTACT 59.015 55.000 0.00 0.00 38.49 2.57
2109 2289 0.391263 CGGGGACAAAGGCACTCTAC 60.391 60.000 0.00 0.00 38.49 2.59
2110 2290 1.550130 CCGGGGACAAAGGCACTCTA 61.550 60.000 0.00 0.00 38.49 2.43
2111 2291 2.750350 CGGGGACAAAGGCACTCT 59.250 61.111 0.00 0.00 38.49 3.24
2112 2292 2.359975 CCGGGGACAAAGGCACTC 60.360 66.667 0.00 0.00 38.49 3.51
2114 2294 3.920093 CTCCCGGGGACAAAGGCAC 62.920 68.421 23.50 0.00 0.00 5.01
2115 2295 3.646715 CTCCCGGGGACAAAGGCA 61.647 66.667 23.50 0.00 0.00 4.75
2116 2296 4.426313 CCTCCCGGGGACAAAGGC 62.426 72.222 23.50 0.00 0.00 4.35
2117 2297 4.426313 GCCTCCCGGGGACAAAGG 62.426 72.222 23.50 20.81 35.12 3.11
2118 2298 3.330720 AGCCTCCCGGGGACAAAG 61.331 66.667 23.50 10.27 35.12 2.77
2119 2299 3.327404 GAGCCTCCCGGGGACAAA 61.327 66.667 23.50 0.00 35.12 2.83
2120 2300 3.943137 ATGAGCCTCCCGGGGACAA 62.943 63.158 23.50 0.00 35.12 3.18
2121 2301 4.414956 ATGAGCCTCCCGGGGACA 62.415 66.667 23.50 9.27 35.12 4.02
2122 2302 3.551407 GATGAGCCTCCCGGGGAC 61.551 72.222 23.50 10.68 35.12 4.46
2123 2303 3.410788 ATGATGAGCCTCCCGGGGA 62.411 63.158 23.50 16.55 35.12 4.81
2124 2304 2.851102 ATGATGAGCCTCCCGGGG 60.851 66.667 23.50 6.77 35.12 5.73
2125 2305 2.429058 CATGATGAGCCTCCCGGG 59.571 66.667 16.85 16.85 38.36 5.73
2126 2306 1.486997 ATCCATGATGAGCCTCCCGG 61.487 60.000 0.00 0.00 0.00 5.73
2127 2307 1.269958 TATCCATGATGAGCCTCCCG 58.730 55.000 0.00 0.00 0.00 5.14
2128 2308 3.618351 CATTATCCATGATGAGCCTCCC 58.382 50.000 0.00 0.00 34.31 4.30
2129 2309 3.015327 GCATTATCCATGATGAGCCTCC 58.985 50.000 0.00 0.00 34.31 4.30
2130 2310 3.015327 GGCATTATCCATGATGAGCCTC 58.985 50.000 0.00 0.00 34.31 4.70
2131 2311 2.291411 GGGCATTATCCATGATGAGCCT 60.291 50.000 0.00 0.00 36.00 4.58
2132 2312 2.097825 GGGCATTATCCATGATGAGCC 58.902 52.381 0.00 0.00 34.31 4.70
2133 2313 3.015327 GAGGGCATTATCCATGATGAGC 58.985 50.000 0.00 0.00 34.31 4.26
2134 2314 4.296621 TGAGGGCATTATCCATGATGAG 57.703 45.455 0.00 0.00 34.31 2.90
2135 2315 4.940468 ATGAGGGCATTATCCATGATGA 57.060 40.909 0.00 0.00 34.31 2.92
2136 2316 4.381612 GCAATGAGGGCATTATCCATGATG 60.382 45.833 0.00 0.00 42.66 3.07
2137 2317 3.767673 GCAATGAGGGCATTATCCATGAT 59.232 43.478 0.00 0.00 42.66 2.45
2138 2318 3.159472 GCAATGAGGGCATTATCCATGA 58.841 45.455 0.00 0.00 42.66 3.07
2139 2319 2.894765 TGCAATGAGGGCATTATCCATG 59.105 45.455 0.00 0.00 42.66 3.66
2140 2320 3.247948 TGCAATGAGGGCATTATCCAT 57.752 42.857 0.00 0.00 42.66 3.41
2141 2321 2.752075 TGCAATGAGGGCATTATCCA 57.248 45.000 0.00 0.00 42.66 3.41
2148 2328 0.035152 ACTCGAATGCAATGAGGGCA 60.035 50.000 15.08 0.00 46.66 5.36
2149 2329 0.379669 CACTCGAATGCAATGAGGGC 59.620 55.000 15.08 0.00 34.03 5.19
2150 2330 1.742761 ACACTCGAATGCAATGAGGG 58.257 50.000 12.37 12.37 39.09 4.30
2151 2331 3.062639 GTGTACACTCGAATGCAATGAGG 59.937 47.826 18.92 8.35 34.03 3.86
2152 2332 3.679502 TGTGTACACTCGAATGCAATGAG 59.320 43.478 25.60 10.59 35.85 2.90
2153 2333 3.431912 GTGTGTACACTCGAATGCAATGA 59.568 43.478 25.60 0.00 43.25 2.57
2154 2334 3.736213 GTGTGTACACTCGAATGCAATG 58.264 45.455 25.60 0.00 43.25 2.82
2166 2346 6.401047 TCCTGCCTTATATAGTGTGTACAC 57.599 41.667 19.36 19.36 46.77 2.90
2167 2347 7.426606 TTTCCTGCCTTATATAGTGTGTACA 57.573 36.000 0.00 0.00 0.00 2.90
2168 2348 7.441458 CCTTTTCCTGCCTTATATAGTGTGTAC 59.559 40.741 0.00 0.00 0.00 2.90
2169 2349 7.346175 TCCTTTTCCTGCCTTATATAGTGTGTA 59.654 37.037 0.00 0.00 0.00 2.90
2170 2350 6.157994 TCCTTTTCCTGCCTTATATAGTGTGT 59.842 38.462 0.00 0.00 0.00 3.72
2171 2351 6.591935 TCCTTTTCCTGCCTTATATAGTGTG 58.408 40.000 0.00 0.00 0.00 3.82
2172 2352 6.824958 TCCTTTTCCTGCCTTATATAGTGT 57.175 37.500 0.00 0.00 0.00 3.55
2173 2353 6.881602 GGATCCTTTTCCTGCCTTATATAGTG 59.118 42.308 3.84 0.00 32.68 2.74
2174 2354 6.295916 CGGATCCTTTTCCTGCCTTATATAGT 60.296 42.308 10.75 0.00 33.30 2.12
2175 2355 6.109359 CGGATCCTTTTCCTGCCTTATATAG 58.891 44.000 10.75 0.00 33.30 1.31
2176 2356 5.045869 CCGGATCCTTTTCCTGCCTTATATA 60.046 44.000 10.75 0.00 33.30 0.86
2177 2357 4.263506 CCGGATCCTTTTCCTGCCTTATAT 60.264 45.833 10.75 0.00 33.30 0.86
2178 2358 3.072476 CCGGATCCTTTTCCTGCCTTATA 59.928 47.826 10.75 0.00 33.30 0.98
2179 2359 2.158608 CCGGATCCTTTTCCTGCCTTAT 60.159 50.000 10.75 0.00 33.30 1.73
2180 2360 1.211949 CCGGATCCTTTTCCTGCCTTA 59.788 52.381 10.75 0.00 33.30 2.69
2181 2361 0.034089 CCGGATCCTTTTCCTGCCTT 60.034 55.000 10.75 0.00 33.30 4.35
2182 2362 0.914417 TCCGGATCCTTTTCCTGCCT 60.914 55.000 10.75 0.00 33.30 4.75
2183 2363 0.464554 CTCCGGATCCTTTTCCTGCC 60.465 60.000 3.57 0.00 33.30 4.85
2184 2364 0.541863 TCTCCGGATCCTTTTCCTGC 59.458 55.000 3.57 0.00 33.30 4.85
2185 2365 1.139853 CCTCTCCGGATCCTTTTCCTG 59.860 57.143 3.57 0.00 33.30 3.86
2186 2366 1.008449 TCCTCTCCGGATCCTTTTCCT 59.992 52.381 3.57 0.00 36.69 3.36
2187 2367 1.414550 CTCCTCTCCGGATCCTTTTCC 59.585 57.143 3.57 0.00 42.12 3.13
2188 2368 2.112190 ACTCCTCTCCGGATCCTTTTC 58.888 52.381 3.57 0.00 42.12 2.29
2189 2369 2.255770 ACTCCTCTCCGGATCCTTTT 57.744 50.000 3.57 0.00 42.12 2.27
2190 2370 2.255770 AACTCCTCTCCGGATCCTTT 57.744 50.000 3.57 0.00 42.12 3.11
2191 2371 2.255770 AAACTCCTCTCCGGATCCTT 57.744 50.000 3.57 0.00 42.12 3.36
2192 2372 2.237392 CAAAAACTCCTCTCCGGATCCT 59.763 50.000 3.57 0.00 42.12 3.24
2193 2373 2.027100 ACAAAAACTCCTCTCCGGATCC 60.027 50.000 3.57 0.00 42.12 3.36
2194 2374 3.003480 CACAAAAACTCCTCTCCGGATC 58.997 50.000 3.57 0.00 42.12 3.36
2195 2375 2.876079 GCACAAAAACTCCTCTCCGGAT 60.876 50.000 3.57 0.00 42.12 4.18
2196 2376 1.542547 GCACAAAAACTCCTCTCCGGA 60.543 52.381 2.93 2.93 40.30 5.14
2197 2377 0.875059 GCACAAAAACTCCTCTCCGG 59.125 55.000 0.00 0.00 0.00 5.14
2198 2378 1.884235 AGCACAAAAACTCCTCTCCG 58.116 50.000 0.00 0.00 0.00 4.63
2199 2379 4.134563 TGTAAGCACAAAAACTCCTCTCC 58.865 43.478 0.00 0.00 0.00 3.71
2200 2380 5.751243 TTGTAAGCACAAAAACTCCTCTC 57.249 39.130 0.00 0.00 41.69 3.20
2201 2381 5.757850 CTTGTAAGCACAAAAACTCCTCT 57.242 39.130 0.00 0.00 43.92 3.69
2221 2401 2.659428 AGCTTTTGACAAGTCCAGCTT 58.341 42.857 10.97 0.00 34.68 3.74
2222 2402 2.355010 AGCTTTTGACAAGTCCAGCT 57.645 45.000 10.97 10.97 33.97 4.24
2223 2403 3.607078 CGTAAGCTTTTGACAAGTCCAGC 60.607 47.826 3.20 7.63 0.00 4.85
2224 2404 3.807622 TCGTAAGCTTTTGACAAGTCCAG 59.192 43.478 3.20 0.00 37.18 3.86
2225 2405 3.799366 TCGTAAGCTTTTGACAAGTCCA 58.201 40.909 3.20 0.00 37.18 4.02
2226 2406 5.867716 TCTATCGTAAGCTTTTGACAAGTCC 59.132 40.000 3.20 0.00 37.18 3.85
2227 2407 6.586844 ACTCTATCGTAAGCTTTTGACAAGTC 59.413 38.462 3.20 0.00 37.18 3.01
2228 2408 6.366332 CACTCTATCGTAAGCTTTTGACAAGT 59.634 38.462 3.20 5.16 37.18 3.16
2229 2409 6.183360 CCACTCTATCGTAAGCTTTTGACAAG 60.183 42.308 3.20 5.08 37.18 3.16
2230 2410 5.637810 CCACTCTATCGTAAGCTTTTGACAA 59.362 40.000 3.20 0.00 37.18 3.18
2231 2411 5.047590 TCCACTCTATCGTAAGCTTTTGACA 60.048 40.000 3.20 0.00 37.18 3.58
2232 2412 5.408356 TCCACTCTATCGTAAGCTTTTGAC 58.592 41.667 3.20 0.00 37.18 3.18
2233 2413 5.654603 TCCACTCTATCGTAAGCTTTTGA 57.345 39.130 3.20 3.19 37.18 2.69
2234 2414 6.238211 CCAATCCACTCTATCGTAAGCTTTTG 60.238 42.308 3.20 0.00 37.18 2.44
2235 2415 5.817816 CCAATCCACTCTATCGTAAGCTTTT 59.182 40.000 3.20 0.00 37.18 2.27
2236 2416 5.128827 TCCAATCCACTCTATCGTAAGCTTT 59.871 40.000 3.20 0.00 37.18 3.51
2237 2417 4.649674 TCCAATCCACTCTATCGTAAGCTT 59.350 41.667 3.48 3.48 37.18 3.74
2238 2418 4.215908 TCCAATCCACTCTATCGTAAGCT 58.784 43.478 0.00 0.00 37.18 3.74
2239 2419 4.278669 TCTCCAATCCACTCTATCGTAAGC 59.721 45.833 0.00 0.00 37.18 3.09
2240 2420 6.582677 ATCTCCAATCCACTCTATCGTAAG 57.417 41.667 0.00 0.00 0.00 2.34
2241 2421 6.015350 GGAATCTCCAATCCACTCTATCGTAA 60.015 42.308 0.00 0.00 36.28 3.18
2242 2422 5.477291 GGAATCTCCAATCCACTCTATCGTA 59.523 44.000 0.00 0.00 36.28 3.43
2243 2423 4.282195 GGAATCTCCAATCCACTCTATCGT 59.718 45.833 0.00 0.00 36.28 3.73
2244 2424 4.526262 AGGAATCTCCAATCCACTCTATCG 59.474 45.833 0.00 0.00 39.61 2.92
2245 2425 5.541868 TGAGGAATCTCCAATCCACTCTATC 59.458 44.000 0.00 0.00 39.61 2.08
2246 2426 5.471424 TGAGGAATCTCCAATCCACTCTAT 58.529 41.667 0.00 0.00 39.61 1.98
2247 2427 4.883759 TGAGGAATCTCCAATCCACTCTA 58.116 43.478 0.00 0.00 39.61 2.43
2248 2428 3.729108 TGAGGAATCTCCAATCCACTCT 58.271 45.455 0.00 0.00 39.61 3.24
2249 2429 4.450053 CTTGAGGAATCTCCAATCCACTC 58.550 47.826 0.00 0.00 39.61 3.51
2250 2430 3.371380 GCTTGAGGAATCTCCAATCCACT 60.371 47.826 0.00 0.00 39.61 4.00
2251 2431 2.948315 GCTTGAGGAATCTCCAATCCAC 59.052 50.000 0.00 0.00 39.61 4.02
2252 2432 2.577563 TGCTTGAGGAATCTCCAATCCA 59.422 45.455 0.00 0.00 39.61 3.41
2253 2433 3.287867 TGCTTGAGGAATCTCCAATCC 57.712 47.619 0.00 0.00 39.61 3.01
2254 2434 5.359009 TCATTTGCTTGAGGAATCTCCAATC 59.641 40.000 0.00 0.00 39.61 2.67
2255 2435 5.266788 TCATTTGCTTGAGGAATCTCCAAT 58.733 37.500 0.00 0.00 39.61 3.16
2256 2436 4.665451 TCATTTGCTTGAGGAATCTCCAA 58.335 39.130 0.00 0.00 39.61 3.53
2257 2437 4.305539 TCATTTGCTTGAGGAATCTCCA 57.694 40.909 0.00 0.00 39.61 3.86
2258 2438 5.184340 CATCATTTGCTTGAGGAATCTCC 57.816 43.478 0.00 0.00 39.23 3.71
2272 2452 4.730949 AACCCATTCTCTGCATCATTTG 57.269 40.909 0.00 0.00 0.00 2.32
2273 2453 5.484715 CAAAACCCATTCTCTGCATCATTT 58.515 37.500 0.00 0.00 0.00 2.32
2274 2454 4.622220 GCAAAACCCATTCTCTGCATCATT 60.622 41.667 0.00 0.00 0.00 2.57
2275 2455 3.118884 GCAAAACCCATTCTCTGCATCAT 60.119 43.478 0.00 0.00 0.00 2.45
2276 2456 2.231964 GCAAAACCCATTCTCTGCATCA 59.768 45.455 0.00 0.00 0.00 3.07
2277 2457 2.733227 CGCAAAACCCATTCTCTGCATC 60.733 50.000 0.00 0.00 0.00 3.91
2278 2458 1.203052 CGCAAAACCCATTCTCTGCAT 59.797 47.619 0.00 0.00 0.00 3.96
2279 2459 0.597568 CGCAAAACCCATTCTCTGCA 59.402 50.000 0.00 0.00 0.00 4.41
2280 2460 0.881118 TCGCAAAACCCATTCTCTGC 59.119 50.000 0.00 0.00 0.00 4.26
2281 2461 1.135575 GCTCGCAAAACCCATTCTCTG 60.136 52.381 0.00 0.00 0.00 3.35
2282 2462 1.168714 GCTCGCAAAACCCATTCTCT 58.831 50.000 0.00 0.00 0.00 3.10
2283 2463 0.171231 GGCTCGCAAAACCCATTCTC 59.829 55.000 0.00 0.00 0.00 2.87
2284 2464 0.539438 TGGCTCGCAAAACCCATTCT 60.539 50.000 0.00 0.00 0.00 2.40
2285 2465 0.316841 TTGGCTCGCAAAACCCATTC 59.683 50.000 0.00 0.00 0.00 2.67
2286 2466 0.975887 ATTGGCTCGCAAAACCCATT 59.024 45.000 0.00 0.00 0.00 3.16
2287 2467 0.247185 CATTGGCTCGCAAAACCCAT 59.753 50.000 0.00 0.00 0.00 4.00
2288 2468 1.664873 CATTGGCTCGCAAAACCCA 59.335 52.632 0.00 0.00 0.00 4.51
2289 2469 1.079888 CCATTGGCTCGCAAAACCC 60.080 57.895 0.00 0.00 0.00 4.11
2290 2470 1.079888 CCCATTGGCTCGCAAAACC 60.080 57.895 0.00 0.00 0.00 3.27
2291 2471 0.667184 CACCCATTGGCTCGCAAAAC 60.667 55.000 0.00 0.00 33.59 2.43
2292 2472 0.825425 TCACCCATTGGCTCGCAAAA 60.825 50.000 0.00 0.00 33.59 2.44
2293 2473 0.825425 TTCACCCATTGGCTCGCAAA 60.825 50.000 0.00 0.00 33.59 3.68
2294 2474 1.228398 TTCACCCATTGGCTCGCAA 60.228 52.632 0.00 0.00 33.59 4.85
2295 2475 1.675310 CTTCACCCATTGGCTCGCA 60.675 57.895 0.00 0.00 33.59 5.10
2296 2476 1.675641 ACTTCACCCATTGGCTCGC 60.676 57.895 0.00 0.00 33.59 5.03
2297 2477 1.308069 CCACTTCACCCATTGGCTCG 61.308 60.000 0.00 0.00 33.59 5.03
2298 2478 0.038166 TCCACTTCACCCATTGGCTC 59.962 55.000 0.00 0.00 33.59 4.70
2299 2479 0.706433 ATCCACTTCACCCATTGGCT 59.294 50.000 0.00 0.00 33.59 4.75
2300 2480 1.106285 GATCCACTTCACCCATTGGC 58.894 55.000 0.00 0.00 33.59 4.52
2301 2481 2.512692 TGATCCACTTCACCCATTGG 57.487 50.000 0.00 0.00 37.80 3.16
2302 2482 2.691526 CCATGATCCACTTCACCCATTG 59.308 50.000 0.00 0.00 0.00 2.82
2303 2483 2.951787 GCCATGATCCACTTCACCCATT 60.952 50.000 0.00 0.00 0.00 3.16
2304 2484 1.410648 GCCATGATCCACTTCACCCAT 60.411 52.381 0.00 0.00 0.00 4.00
2305 2485 0.034186 GCCATGATCCACTTCACCCA 60.034 55.000 0.00 0.00 0.00 4.51
2306 2486 0.034186 TGCCATGATCCACTTCACCC 60.034 55.000 0.00 0.00 0.00 4.61
2307 2487 1.679680 CATGCCATGATCCACTTCACC 59.320 52.381 0.00 0.00 0.00 4.02
2308 2488 2.098607 CACATGCCATGATCCACTTCAC 59.901 50.000 12.53 0.00 0.00 3.18
2309 2489 2.291089 ACACATGCCATGATCCACTTCA 60.291 45.455 12.53 0.00 0.00 3.02
2310 2490 2.357009 GACACATGCCATGATCCACTTC 59.643 50.000 12.53 0.00 0.00 3.01
2311 2491 2.291089 TGACACATGCCATGATCCACTT 60.291 45.455 12.53 0.00 0.00 3.16
2312 2492 1.282738 TGACACATGCCATGATCCACT 59.717 47.619 12.53 0.00 0.00 4.00
2313 2493 1.402968 GTGACACATGCCATGATCCAC 59.597 52.381 12.53 11.18 0.00 4.02
2314 2494 1.682702 GGTGACACATGCCATGATCCA 60.683 52.381 12.53 2.83 0.00 3.41
2315 2495 1.027357 GGTGACACATGCCATGATCC 58.973 55.000 12.53 2.62 0.00 3.36
2316 2496 1.945394 GAGGTGACACATGCCATGATC 59.055 52.381 12.53 9.02 0.00 2.92
2317 2497 1.744798 CGAGGTGACACATGCCATGAT 60.745 52.381 12.53 0.00 0.00 2.45
2318 2498 0.391528 CGAGGTGACACATGCCATGA 60.392 55.000 12.53 0.00 0.00 3.07
2319 2499 1.371337 CCGAGGTGACACATGCCATG 61.371 60.000 8.08 2.40 0.00 3.66
2320 2500 1.078214 CCGAGGTGACACATGCCAT 60.078 57.895 8.08 0.00 0.00 4.40
2321 2501 2.050836 AACCGAGGTGACACATGCCA 62.051 55.000 8.08 0.00 0.00 4.92
2322 2502 1.298859 GAACCGAGGTGACACATGCC 61.299 60.000 8.08 0.00 0.00 4.40
2323 2503 1.626654 CGAACCGAGGTGACACATGC 61.627 60.000 8.08 0.00 0.00 4.06
2324 2504 1.014044 CCGAACCGAGGTGACACATG 61.014 60.000 8.08 0.00 0.00 3.21
2325 2505 1.292223 CCGAACCGAGGTGACACAT 59.708 57.895 8.08 0.00 0.00 3.21
2326 2506 0.822944 TACCGAACCGAGGTGACACA 60.823 55.000 8.08 0.00 42.83 3.72
2327 2507 0.529378 ATACCGAACCGAGGTGACAC 59.471 55.000 0.00 0.00 42.83 3.67
2328 2508 1.067425 CAATACCGAACCGAGGTGACA 60.067 52.381 0.00 0.00 42.83 3.58
2329 2509 1.636988 CAATACCGAACCGAGGTGAC 58.363 55.000 0.00 0.00 42.83 3.67
2330 2510 0.108520 GCAATACCGAACCGAGGTGA 60.109 55.000 0.00 0.00 42.83 4.02
2331 2511 0.390603 TGCAATACCGAACCGAGGTG 60.391 55.000 0.00 0.00 42.83 4.00
2332 2512 0.539986 ATGCAATACCGAACCGAGGT 59.460 50.000 0.00 0.00 45.28 3.85
2333 2513 2.519377 TATGCAATACCGAACCGAGG 57.481 50.000 0.00 0.00 0.00 4.63
2334 2514 4.750098 AGATTTATGCAATACCGAACCGAG 59.250 41.667 0.00 0.00 0.00 4.63
2335 2515 4.699637 AGATTTATGCAATACCGAACCGA 58.300 39.130 0.00 0.00 0.00 4.69
2336 2516 5.418310 AAGATTTATGCAATACCGAACCG 57.582 39.130 0.00 0.00 0.00 4.44
2337 2517 6.849305 CGTTAAGATTTATGCAATACCGAACC 59.151 38.462 0.00 0.00 0.00 3.62
2338 2518 6.849305 CCGTTAAGATTTATGCAATACCGAAC 59.151 38.462 0.00 0.00 0.00 3.95
2339 2519 6.762187 TCCGTTAAGATTTATGCAATACCGAA 59.238 34.615 0.00 0.00 0.00 4.30
2340 2520 6.282167 TCCGTTAAGATTTATGCAATACCGA 58.718 36.000 0.00 0.00 0.00 4.69
2341 2521 6.533819 TCCGTTAAGATTTATGCAATACCG 57.466 37.500 0.00 0.00 0.00 4.02
2342 2522 7.136772 GGTTCCGTTAAGATTTATGCAATACC 58.863 38.462 0.00 0.00 0.00 2.73
2343 2523 7.012989 AGGGTTCCGTTAAGATTTATGCAATAC 59.987 37.037 0.00 0.00 0.00 1.89
2344 2524 7.057894 AGGGTTCCGTTAAGATTTATGCAATA 58.942 34.615 0.00 0.00 0.00 1.90
2345 2525 5.891551 AGGGTTCCGTTAAGATTTATGCAAT 59.108 36.000 0.00 0.00 0.00 3.56
2346 2526 5.258051 AGGGTTCCGTTAAGATTTATGCAA 58.742 37.500 0.00 0.00 0.00 4.08
2347 2527 4.850680 AGGGTTCCGTTAAGATTTATGCA 58.149 39.130 0.00 0.00 0.00 3.96
2348 2528 5.123936 AGAGGGTTCCGTTAAGATTTATGC 58.876 41.667 0.00 0.00 0.00 3.14
2349 2529 8.202137 TCTAAGAGGGTTCCGTTAAGATTTATG 58.798 37.037 0.00 0.00 0.00 1.90
2350 2530 8.315220 TCTAAGAGGGTTCCGTTAAGATTTAT 57.685 34.615 0.00 0.00 0.00 1.40
2351 2531 7.722949 TCTAAGAGGGTTCCGTTAAGATTTA 57.277 36.000 0.00 0.00 0.00 1.40
2352 2532 6.616237 TCTAAGAGGGTTCCGTTAAGATTT 57.384 37.500 0.00 0.00 0.00 2.17
2353 2533 6.809976 ATCTAAGAGGGTTCCGTTAAGATT 57.190 37.500 0.00 0.00 0.00 2.40
2354 2534 6.461231 CGAATCTAAGAGGGTTCCGTTAAGAT 60.461 42.308 0.00 0.00 0.00 2.40
2355 2535 5.163581 CGAATCTAAGAGGGTTCCGTTAAGA 60.164 44.000 0.00 0.00 0.00 2.10
2356 2536 5.041940 CGAATCTAAGAGGGTTCCGTTAAG 58.958 45.833 0.00 0.00 0.00 1.85
2357 2537 4.463891 ACGAATCTAAGAGGGTTCCGTTAA 59.536 41.667 0.00 0.00 0.00 2.01
2358 2538 4.019174 ACGAATCTAAGAGGGTTCCGTTA 58.981 43.478 0.00 0.00 0.00 3.18
2359 2539 2.830321 ACGAATCTAAGAGGGTTCCGTT 59.170 45.455 0.00 0.00 0.00 4.44
2360 2540 2.454538 ACGAATCTAAGAGGGTTCCGT 58.545 47.619 0.00 0.00 0.00 4.69
2361 2541 3.521947 AACGAATCTAAGAGGGTTCCG 57.478 47.619 0.00 0.00 0.00 4.30
2362 2542 3.374367 GCAAACGAATCTAAGAGGGTTCC 59.626 47.826 0.00 0.00 0.00 3.62
2363 2543 4.000988 TGCAAACGAATCTAAGAGGGTTC 58.999 43.478 0.00 0.00 0.00 3.62
2364 2544 3.751698 GTGCAAACGAATCTAAGAGGGTT 59.248 43.478 0.00 0.00 0.00 4.11
2365 2545 3.335579 GTGCAAACGAATCTAAGAGGGT 58.664 45.455 0.00 0.00 0.00 4.34
2366 2546 2.678336 GGTGCAAACGAATCTAAGAGGG 59.322 50.000 0.00 0.00 0.00 4.30
2367 2547 2.348666 CGGTGCAAACGAATCTAAGAGG 59.651 50.000 6.21 0.00 0.00 3.69
2368 2548 3.060895 GTCGGTGCAAACGAATCTAAGAG 59.939 47.826 15.25 0.00 42.55 2.85
2369 2549 2.991190 GTCGGTGCAAACGAATCTAAGA 59.009 45.455 15.25 0.00 42.55 2.10
2370 2550 2.222508 CGTCGGTGCAAACGAATCTAAG 60.223 50.000 15.25 1.87 42.55 2.18
2371 2551 1.722464 CGTCGGTGCAAACGAATCTAA 59.278 47.619 15.25 0.00 42.55 2.10
2372 2552 1.342555 CGTCGGTGCAAACGAATCTA 58.657 50.000 15.25 0.00 42.55 1.98
2373 2553 1.897398 GCGTCGGTGCAAACGAATCT 61.897 55.000 18.40 0.00 42.55 2.40
2374 2554 1.509162 GCGTCGGTGCAAACGAATC 60.509 57.895 18.40 9.42 42.55 2.52
2375 2555 2.554272 GCGTCGGTGCAAACGAAT 59.446 55.556 18.40 0.00 42.55 3.34
2376 2556 3.990806 CGCGTCGGTGCAAACGAA 61.991 61.111 18.40 2.01 42.55 3.85
2395 2575 3.468326 GATCTCCCTGCCGAAGCCC 62.468 68.421 0.00 0.00 38.69 5.19
2396 2576 2.110006 GATCTCCCTGCCGAAGCC 59.890 66.667 0.00 0.00 38.69 4.35
2397 2577 2.110006 GGATCTCCCTGCCGAAGC 59.890 66.667 0.00 0.00 40.48 3.86
2407 2587 1.215673 GAAAGGGGAAAGGGGATCTCC 59.784 57.143 2.22 2.22 37.75 3.71
2408 2588 2.209758 AGAAAGGGGAAAGGGGATCTC 58.790 52.381 0.00 0.00 0.00 2.75
2409 2589 2.385263 AGAAAGGGGAAAGGGGATCT 57.615 50.000 0.00 0.00 0.00 2.75
2410 2590 4.816048 ATAAGAAAGGGGAAAGGGGATC 57.184 45.455 0.00 0.00 0.00 3.36
2411 2591 4.078571 GGAATAAGAAAGGGGAAAGGGGAT 60.079 45.833 0.00 0.00 0.00 3.85
2412 2592 3.271225 GGAATAAGAAAGGGGAAAGGGGA 59.729 47.826 0.00 0.00 0.00 4.81
2413 2593 3.272285 AGGAATAAGAAAGGGGAAAGGGG 59.728 47.826 0.00 0.00 0.00 4.79
2414 2594 4.230733 AGAGGAATAAGAAAGGGGAAAGGG 59.769 45.833 0.00 0.00 0.00 3.95
2415 2595 5.458451 AGAGGAATAAGAAAGGGGAAAGG 57.542 43.478 0.00 0.00 0.00 3.11
2416 2596 7.554476 CACTAAGAGGAATAAGAAAGGGGAAAG 59.446 40.741 0.00 0.00 0.00 2.62
2417 2597 7.402862 CACTAAGAGGAATAAGAAAGGGGAAA 58.597 38.462 0.00 0.00 0.00 3.13
2418 2598 6.069615 CCACTAAGAGGAATAAGAAAGGGGAA 60.070 42.308 0.00 0.00 0.00 3.97
2419 2599 5.428783 CCACTAAGAGGAATAAGAAAGGGGA 59.571 44.000 0.00 0.00 0.00 4.81
2420 2600 5.685728 CCACTAAGAGGAATAAGAAAGGGG 58.314 45.833 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.