Multiple sequence alignment - TraesCS6D01G207900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G207900 chr6D 100.000 5899 0 0 1 5899 293313754 293319652 0.000000e+00 10894.0
1 TraesCS6D01G207900 chr6A 94.984 2492 106 11 2908 5394 427451238 427448761 0.000000e+00 3892.0
2 TraesCS6D01G207900 chr6A 95.836 1345 40 6 1488 2820 427452570 427451230 0.000000e+00 2159.0
3 TraesCS6D01G207900 chr6A 93.543 604 25 6 891 1493 427453418 427452828 0.000000e+00 887.0
4 TraesCS6D01G207900 chr6A 84.557 395 36 10 292 685 427484264 427483894 9.340000e-98 368.0
5 TraesCS6D01G207900 chr6A 92.715 151 11 0 697 847 427453764 427453614 9.950000e-53 219.0
6 TraesCS6D01G207900 chr6B 95.026 1347 45 8 1488 2820 457873448 457874786 0.000000e+00 2097.0
7 TraesCS6D01G207900 chr6B 90.951 1304 70 19 3661 4950 457875768 457877037 0.000000e+00 1711.0
8 TraesCS6D01G207900 chr6B 96.413 697 24 1 2908 3603 457874778 457875474 0.000000e+00 1147.0
9 TraesCS6D01G207900 chr6B 95.667 577 20 4 915 1490 457872609 457873181 0.000000e+00 922.0
10 TraesCS6D01G207900 chr7A 85.552 969 113 14 1855 2818 701310196 701309250 0.000000e+00 989.0
11 TraesCS6D01G207900 chr7A 86.115 713 76 12 3558 4261 701308159 701307461 0.000000e+00 747.0
12 TraesCS6D01G207900 chr7A 90.103 485 36 8 3070 3544 701308902 701308420 2.340000e-173 619.0
13 TraesCS6D01G207900 chr7A 88.587 368 41 1 1126 1493 701311428 701311062 4.190000e-121 446.0
14 TraesCS6D01G207900 chr7A 80.141 569 92 11 5342 5899 507145148 507144590 7.120000e-109 405.0
15 TraesCS6D01G207900 chr7A 85.354 198 26 3 4365 4561 701307445 701307250 1.000000e-47 202.0
16 TraesCS6D01G207900 chr7A 98.020 101 2 0 2816 2916 629780120 629780020 6.080000e-40 176.0
17 TraesCS6D01G207900 chr7A 92.105 114 7 2 2818 2931 547951769 547951658 6.120000e-35 159.0
18 TraesCS6D01G207900 chr7B 84.722 1008 112 24 1824 2818 700421836 700420858 0.000000e+00 970.0
19 TraesCS6D01G207900 chr7B 81.114 1239 138 43 3558 4742 700419964 700418768 0.000000e+00 904.0
20 TraesCS6D01G207900 chr7B 90.847 437 28 9 3118 3544 700420664 700420230 5.130000e-160 575.0
21 TraesCS6D01G207900 chr7B 88.347 369 41 2 1126 1493 700423034 700422667 5.430000e-120 442.0
22 TraesCS6D01G207900 chr7D 85.007 707 74 14 1855 2556 611262431 611261752 0.000000e+00 689.0
23 TraesCS6D01G207900 chr7D 89.050 484 41 8 3070 3544 611261376 611260896 1.830000e-164 590.0
24 TraesCS6D01G207900 chr7D 89.130 368 39 1 1126 1493 611263668 611263302 1.940000e-124 457.0
25 TraesCS6D01G207900 chr7D 83.641 434 43 10 4018 4431 611260534 611260109 3.340000e-102 383.0
26 TraesCS6D01G207900 chr4D 88.596 570 52 6 5340 5899 414043872 414044438 0.000000e+00 680.0
27 TraesCS6D01G207900 chr5D 87.719 570 54 8 5340 5899 324369019 324368456 0.000000e+00 651.0
28 TraesCS6D01G207900 chr5D 86.620 568 66 9 5340 5899 295080374 295079809 2.340000e-173 619.0
29 TraesCS6D01G207900 chr5D 83.055 419 47 15 5497 5899 526430961 526430551 5.620000e-95 359.0
30 TraesCS6D01G207900 chr5D 94.444 36 1 1 5250 5284 221880386 221880421 3.000000e-03 54.7
31 TraesCS6D01G207900 chr5B 87.654 567 61 8 5340 5899 375796456 375795892 0.000000e+00 651.0
32 TraesCS6D01G207900 chr5B 97.980 99 2 0 2817 2915 223038342 223038244 7.860000e-39 172.0
33 TraesCS6D01G207900 chr4A 87.500 568 61 9 5340 5899 578106117 578106682 0.000000e+00 647.0
34 TraesCS6D01G207900 chr3B 85.739 568 69 5 5340 5899 650063210 650063773 1.830000e-164 590.0
35 TraesCS6D01G207900 chr3B 82.130 554 74 14 5364 5899 760803813 760804359 9.010000e-123 451.0
36 TraesCS6D01G207900 chr3B 95.000 40 1 1 5246 5284 534275767 534275806 1.780000e-05 62.1
37 TraesCS6D01G207900 chr2D 83.422 567 87 4 5340 5899 474994630 474995196 2.440000e-143 520.0
38 TraesCS6D01G207900 chr2D 95.238 105 4 1 2819 2923 380431590 380431693 1.320000e-36 165.0
39 TraesCS6D01G207900 chr2D 92.727 110 8 0 2817 2926 488233630 488233739 6.120000e-35 159.0
40 TraesCS6D01G207900 chr1B 83.042 572 80 13 5340 5899 604833847 604833281 2.450000e-138 503.0
41 TraesCS6D01G207900 chr1B 84.310 478 54 12 5340 5803 506150095 506150565 1.170000e-121 448.0
42 TraesCS6D01G207900 chr1D 78.887 521 73 16 5392 5899 64147035 64146539 9.540000e-83 318.0
43 TraesCS6D01G207900 chr2B 82.011 378 50 9 5534 5899 638760678 638761049 7.430000e-79 305.0
44 TraesCS6D01G207900 chr2B 96.296 108 3 1 2809 2916 440223758 440223864 6.080000e-40 176.0
45 TraesCS6D01G207900 chr2B 94.444 36 2 0 5243 5278 361289178 361289213 8.260000e-04 56.5
46 TraesCS6D01G207900 chr4B 78.056 360 50 24 5541 5889 70060706 70061047 3.610000e-47 200.0
47 TraesCS6D01G207900 chr4B 95.283 106 5 0 2819 2924 216814998 216815103 1.020000e-37 169.0
48 TraesCS6D01G207900 chr4B 100.000 28 0 0 5251 5278 15932229 15932202 1.100000e-02 52.8
49 TraesCS6D01G207900 chr4B 100.000 28 0 0 5251 5278 15995663 15995636 1.100000e-02 52.8
50 TraesCS6D01G207900 chr2A 81.224 245 35 10 5652 5889 10581726 10581966 2.810000e-43 187.0
51 TraesCS6D01G207900 chr2A 95.000 40 1 1 5246 5284 565154337 565154298 1.780000e-05 62.1
52 TraesCS6D01G207900 chrUn 76.440 382 51 22 4183 4553 235343500 235343853 2.830000e-38 171.0
53 TraesCS6D01G207900 chrUn 76.440 382 51 22 4183 4553 239894161 239893808 2.830000e-38 171.0
54 TraesCS6D01G207900 chrUn 76.178 382 52 22 4183 4553 241295145 241294792 1.320000e-36 165.0
55 TraesCS6D01G207900 chrUn 76.178 382 52 22 4183 4553 304691630 304691983 1.320000e-36 165.0
56 TraesCS6D01G207900 chrUn 96.939 98 3 0 2818 2915 305213131 305213228 1.320000e-36 165.0
57 TraesCS6D01G207900 chr3A 91.200 125 8 3 2815 2937 648862927 648863050 3.660000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G207900 chr6D 293313754 293319652 5898 False 10894.00 10894 100.00000 1 5899 1 chr6D.!!$F1 5898
1 TraesCS6D01G207900 chr6A 427448761 427453764 5003 True 1789.25 3892 94.26950 697 5394 4 chr6A.!!$R2 4697
2 TraesCS6D01G207900 chr6B 457872609 457877037 4428 False 1469.25 2097 94.51425 915 4950 4 chr6B.!!$F1 4035
3 TraesCS6D01G207900 chr7A 701307250 701311428 4178 True 600.60 989 87.14220 1126 4561 5 chr7A.!!$R4 3435
4 TraesCS6D01G207900 chr7A 507144590 507145148 558 True 405.00 405 80.14100 5342 5899 1 chr7A.!!$R1 557
5 TraesCS6D01G207900 chr7B 700418768 700423034 4266 True 722.75 970 86.25750 1126 4742 4 chr7B.!!$R1 3616
6 TraesCS6D01G207900 chr7D 611260109 611263668 3559 True 529.75 689 86.70700 1126 4431 4 chr7D.!!$R1 3305
7 TraesCS6D01G207900 chr4D 414043872 414044438 566 False 680.00 680 88.59600 5340 5899 1 chr4D.!!$F1 559
8 TraesCS6D01G207900 chr5D 324368456 324369019 563 True 651.00 651 87.71900 5340 5899 1 chr5D.!!$R2 559
9 TraesCS6D01G207900 chr5D 295079809 295080374 565 True 619.00 619 86.62000 5340 5899 1 chr5D.!!$R1 559
10 TraesCS6D01G207900 chr5B 375795892 375796456 564 True 651.00 651 87.65400 5340 5899 1 chr5B.!!$R2 559
11 TraesCS6D01G207900 chr4A 578106117 578106682 565 False 647.00 647 87.50000 5340 5899 1 chr4A.!!$F1 559
12 TraesCS6D01G207900 chr3B 650063210 650063773 563 False 590.00 590 85.73900 5340 5899 1 chr3B.!!$F2 559
13 TraesCS6D01G207900 chr3B 760803813 760804359 546 False 451.00 451 82.13000 5364 5899 1 chr3B.!!$F3 535
14 TraesCS6D01G207900 chr2D 474994630 474995196 566 False 520.00 520 83.42200 5340 5899 1 chr2D.!!$F2 559
15 TraesCS6D01G207900 chr1B 604833281 604833847 566 True 503.00 503 83.04200 5340 5899 1 chr1B.!!$R1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 591 0.108138 ACGCGGCTTTGAGCTCTTAT 60.108 50.000 16.19 0.0 41.99 1.73 F
683 684 0.173708 CTCGCGGCCTCTCTACTTTT 59.826 55.000 6.13 0.0 0.00 2.27 F
854 1031 0.338814 ACCCGTCTTAGGACCAGGAT 59.661 55.000 13.76 0.0 39.15 3.24 F
1033 1212 0.824759 AGCCAGTCAATACTCCCGTC 59.175 55.000 0.00 0.0 31.97 4.79 F
2833 3561 1.835531 GGAAATACTCCCTCCGTTCCA 59.164 52.381 0.00 0.0 38.44 3.53 F
4407 6152 1.738099 GCGGCTGTGAATGACTCGT 60.738 57.895 0.00 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1416 1596 0.893447 AGGTCGGAAGAAACCTACCG 59.107 55.000 0.0 0.0 46.28 4.02 R
1993 2707 1.737793 GCCACAAATCCTTCAGGTACG 59.262 52.381 0.0 0.0 36.34 3.67 R
2819 3547 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.0 0.0 0.00 3.85 R
3029 3884 2.286713 TGTTTCACGCTGATTCCGTTTG 60.287 45.455 0.0 0.0 36.69 2.93 R
4419 6164 1.000646 AAACCCCCACAACACACGT 60.001 52.632 0.0 0.0 0.00 4.49 R
5720 7525 0.037232 GGACCAGCACACCAGAGTAC 60.037 60.000 0.0 0.0 0.00 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 189 9.981114 ATTTCGGAAATTTCAAGTAATGTTCTT 57.019 25.926 19.49 0.00 0.00 2.52
189 190 8.795786 TTCGGAAATTTCAAGTAATGTTCTTG 57.204 30.769 19.49 0.00 42.25 3.02
190 191 7.367285 TCGGAAATTTCAAGTAATGTTCTTGG 58.633 34.615 19.49 0.00 41.52 3.61
191 192 7.013846 TCGGAAATTTCAAGTAATGTTCTTGGT 59.986 33.333 19.49 0.00 41.52 3.67
192 193 7.651704 CGGAAATTTCAAGTAATGTTCTTGGTT 59.348 33.333 19.49 0.00 41.52 3.67
193 194 9.325198 GGAAATTTCAAGTAATGTTCTTGGTTT 57.675 29.630 19.49 5.54 41.52 3.27
195 196 9.883142 AAATTTCAAGTAATGTTCTTGGTTTCA 57.117 25.926 5.95 0.00 41.52 2.69
196 197 9.883142 AATTTCAAGTAATGTTCTTGGTTTCAA 57.117 25.926 5.95 0.00 41.52 2.69
197 198 9.883142 ATTTCAAGTAATGTTCTTGGTTTCAAA 57.117 25.926 5.95 0.74 41.52 2.69
198 199 9.712305 TTTCAAGTAATGTTCTTGGTTTCAAAA 57.288 25.926 5.95 0.00 41.52 2.44
199 200 8.925161 TCAAGTAATGTTCTTGGTTTCAAAAG 57.075 30.769 5.95 0.00 41.52 2.27
200 201 8.527810 TCAAGTAATGTTCTTGGTTTCAAAAGT 58.472 29.630 5.95 0.00 41.52 2.66
201 202 9.150348 CAAGTAATGTTCTTGGTTTCAAAAGTT 57.850 29.630 0.00 0.00 38.70 2.66
202 203 8.702163 AGTAATGTTCTTGGTTTCAAAAGTTG 57.298 30.769 0.00 0.00 31.77 3.16
203 204 8.311109 AGTAATGTTCTTGGTTTCAAAAGTTGT 58.689 29.630 0.00 0.00 31.77 3.32
204 205 7.977789 AATGTTCTTGGTTTCAAAAGTTGTT 57.022 28.000 0.00 0.00 31.77 2.83
205 206 7.595311 ATGTTCTTGGTTTCAAAAGTTGTTC 57.405 32.000 0.00 0.00 31.77 3.18
206 207 5.631512 TGTTCTTGGTTTCAAAAGTTGTTCG 59.368 36.000 0.00 0.00 31.77 3.95
207 208 4.739195 TCTTGGTTTCAAAAGTTGTTCGG 58.261 39.130 0.00 0.00 31.77 4.30
208 209 4.459685 TCTTGGTTTCAAAAGTTGTTCGGA 59.540 37.500 0.00 0.00 31.77 4.55
209 210 4.364415 TGGTTTCAAAAGTTGTTCGGAG 57.636 40.909 0.00 0.00 0.00 4.63
210 211 3.759618 TGGTTTCAAAAGTTGTTCGGAGT 59.240 39.130 0.00 0.00 0.00 3.85
211 212 4.102649 GGTTTCAAAAGTTGTTCGGAGTG 58.897 43.478 0.00 0.00 0.00 3.51
212 213 4.380128 GGTTTCAAAAGTTGTTCGGAGTGT 60.380 41.667 0.00 0.00 0.00 3.55
213 214 5.158494 GTTTCAAAAGTTGTTCGGAGTGTT 58.842 37.500 0.00 0.00 0.00 3.32
214 215 5.379732 TTCAAAAGTTGTTCGGAGTGTTT 57.620 34.783 0.00 0.00 0.00 2.83
215 216 5.379732 TCAAAAGTTGTTCGGAGTGTTTT 57.620 34.783 0.00 0.00 0.00 2.43
216 217 5.774630 TCAAAAGTTGTTCGGAGTGTTTTT 58.225 33.333 0.00 0.00 0.00 1.94
217 218 5.631512 TCAAAAGTTGTTCGGAGTGTTTTTG 59.368 36.000 0.00 0.00 36.27 2.44
218 219 4.776795 AAGTTGTTCGGAGTGTTTTTGT 57.223 36.364 0.00 0.00 0.00 2.83
219 220 4.776795 AGTTGTTCGGAGTGTTTTTGTT 57.223 36.364 0.00 0.00 0.00 2.83
220 221 4.729595 AGTTGTTCGGAGTGTTTTTGTTC 58.270 39.130 0.00 0.00 0.00 3.18
221 222 4.216687 AGTTGTTCGGAGTGTTTTTGTTCA 59.783 37.500 0.00 0.00 0.00 3.18
222 223 4.768130 TGTTCGGAGTGTTTTTGTTCAA 57.232 36.364 0.00 0.00 0.00 2.69
223 224 5.317733 TGTTCGGAGTGTTTTTGTTCAAT 57.682 34.783 0.00 0.00 0.00 2.57
224 225 5.098893 TGTTCGGAGTGTTTTTGTTCAATG 58.901 37.500 0.00 0.00 0.00 2.82
225 226 4.974368 TCGGAGTGTTTTTGTTCAATGT 57.026 36.364 0.00 0.00 0.00 2.71
226 227 5.317733 TCGGAGTGTTTTTGTTCAATGTT 57.682 34.783 0.00 0.00 0.00 2.71
227 228 5.715070 TCGGAGTGTTTTTGTTCAATGTTT 58.285 33.333 0.00 0.00 0.00 2.83
228 229 6.159988 TCGGAGTGTTTTTGTTCAATGTTTT 58.840 32.000 0.00 0.00 0.00 2.43
229 230 6.309251 TCGGAGTGTTTTTGTTCAATGTTTTC 59.691 34.615 0.00 0.00 0.00 2.29
230 231 6.090088 CGGAGTGTTTTTGTTCAATGTTTTCA 59.910 34.615 0.00 0.00 0.00 2.69
231 232 7.233689 GGAGTGTTTTTGTTCAATGTTTTCAC 58.766 34.615 0.00 0.00 0.00 3.18
232 233 7.095439 GGAGTGTTTTTGTTCAATGTTTTCACA 60.095 33.333 0.00 0.00 37.31 3.58
233 234 8.147642 AGTGTTTTTGTTCAATGTTTTCACAA 57.852 26.923 0.00 0.00 36.16 3.33
234 235 8.067189 AGTGTTTTTGTTCAATGTTTTCACAAC 58.933 29.630 0.00 0.00 36.16 3.32
235 236 8.067189 GTGTTTTTGTTCAATGTTTTCACAACT 58.933 29.630 0.00 0.00 36.16 3.16
236 237 8.616076 TGTTTTTGTTCAATGTTTTCACAACTT 58.384 25.926 0.00 0.00 36.16 2.66
237 238 9.444534 GTTTTTGTTCAATGTTTTCACAACTTT 57.555 25.926 0.00 0.00 36.16 2.66
239 240 9.657121 TTTTGTTCAATGTTTTCACAACTTTTC 57.343 25.926 0.00 0.00 36.16 2.29
240 241 8.600449 TTGTTCAATGTTTTCACAACTTTTCT 57.400 26.923 0.00 0.00 36.16 2.52
241 242 9.698309 TTGTTCAATGTTTTCACAACTTTTCTA 57.302 25.926 0.00 0.00 36.16 2.10
242 243 9.698309 TGTTCAATGTTTTCACAACTTTTCTAA 57.302 25.926 0.00 0.00 36.16 2.10
325 326 9.786105 AATGTTGGAATTTCAAAAATTGTTCAC 57.214 25.926 0.00 0.00 0.00 3.18
326 327 8.327941 TGTTGGAATTTCAAAAATTGTTCACA 57.672 26.923 0.00 0.00 0.00 3.58
327 328 8.786898 TGTTGGAATTTCAAAAATTGTTCACAA 58.213 25.926 0.00 0.00 40.51 3.33
328 329 9.617975 GTTGGAATTTCAAAAATTGTTCACAAA 57.382 25.926 0.00 0.00 39.55 2.83
360 361 9.670719 AAAAATGTTTTGTGTTTCGAATTTTGT 57.329 22.222 0.00 0.00 0.00 2.83
361 362 9.670719 AAAATGTTTTGTGTTTCGAATTTTGTT 57.329 22.222 0.00 0.00 0.00 2.83
362 363 8.873242 AATGTTTTGTGTTTCGAATTTTGTTC 57.127 26.923 0.00 0.00 0.00 3.18
363 364 7.408132 TGTTTTGTGTTTCGAATTTTGTTCA 57.592 28.000 0.00 0.00 0.00 3.18
364 365 7.505646 TGTTTTGTGTTTCGAATTTTGTTCAG 58.494 30.769 0.00 0.00 0.00 3.02
365 366 6.639671 TTTGTGTTTCGAATTTTGTTCAGG 57.360 33.333 0.00 0.00 0.00 3.86
366 367 5.568685 TGTGTTTCGAATTTTGTTCAGGA 57.431 34.783 0.00 0.00 0.00 3.86
367 368 5.577835 TGTGTTTCGAATTTTGTTCAGGAG 58.422 37.500 0.00 0.00 0.00 3.69
368 369 5.124776 TGTGTTTCGAATTTTGTTCAGGAGT 59.875 36.000 0.00 0.00 0.00 3.85
369 370 6.033966 GTGTTTCGAATTTTGTTCAGGAGTT 58.966 36.000 0.00 0.00 0.00 3.01
370 371 6.530181 GTGTTTCGAATTTTGTTCAGGAGTTT 59.470 34.615 0.00 0.00 0.00 2.66
371 372 6.750039 TGTTTCGAATTTTGTTCAGGAGTTTC 59.250 34.615 0.00 0.00 0.00 2.78
372 373 6.443934 TTCGAATTTTGTTCAGGAGTTTCA 57.556 33.333 0.00 0.00 0.00 2.69
373 374 6.443934 TCGAATTTTGTTCAGGAGTTTCAA 57.556 33.333 0.00 0.00 0.00 2.69
374 375 6.857956 TCGAATTTTGTTCAGGAGTTTCAAA 58.142 32.000 0.00 0.00 0.00 2.69
375 376 7.316640 TCGAATTTTGTTCAGGAGTTTCAAAA 58.683 30.769 0.00 0.00 40.50 2.44
376 377 7.978975 TCGAATTTTGTTCAGGAGTTTCAAAAT 59.021 29.630 0.00 0.00 44.78 1.82
380 381 8.614469 TTTTGTTCAGGAGTTTCAAAATTTGT 57.386 26.923 5.56 0.00 34.54 2.83
381 382 8.614469 TTTGTTCAGGAGTTTCAAAATTTGTT 57.386 26.923 5.56 0.00 0.00 2.83
382 383 8.614469 TTGTTCAGGAGTTTCAAAATTTGTTT 57.386 26.923 5.56 0.00 0.00 2.83
383 384 8.027440 TGTTCAGGAGTTTCAAAATTTGTTTG 57.973 30.769 5.56 0.00 0.00 2.93
384 385 6.660887 TCAGGAGTTTCAAAATTTGTTTGC 57.339 33.333 5.56 0.00 0.00 3.68
385 386 6.169094 TCAGGAGTTTCAAAATTTGTTTGCA 58.831 32.000 5.56 0.00 0.00 4.08
386 387 6.822676 TCAGGAGTTTCAAAATTTGTTTGCAT 59.177 30.769 5.56 0.00 0.00 3.96
387 388 7.336427 TCAGGAGTTTCAAAATTTGTTTGCATT 59.664 29.630 5.56 0.00 0.00 3.56
388 389 7.969508 CAGGAGTTTCAAAATTTGTTTGCATTT 59.030 29.630 5.56 0.00 0.00 2.32
389 390 8.183536 AGGAGTTTCAAAATTTGTTTGCATTTC 58.816 29.630 5.56 0.00 0.00 2.17
390 391 8.183536 GGAGTTTCAAAATTTGTTTGCATTTCT 58.816 29.630 5.56 0.00 0.00 2.52
391 392 8.898983 AGTTTCAAAATTTGTTTGCATTTCTG 57.101 26.923 5.56 0.00 0.00 3.02
392 393 8.728833 AGTTTCAAAATTTGTTTGCATTTCTGA 58.271 25.926 5.56 0.00 0.00 3.27
393 394 8.787884 GTTTCAAAATTTGTTTGCATTTCTGAC 58.212 29.630 5.56 0.00 0.00 3.51
394 395 7.846644 TCAAAATTTGTTTGCATTTCTGACT 57.153 28.000 5.56 0.00 0.00 3.41
395 396 8.266392 TCAAAATTTGTTTGCATTTCTGACTT 57.734 26.923 5.56 0.00 0.00 3.01
396 397 8.176365 TCAAAATTTGTTTGCATTTCTGACTTG 58.824 29.630 5.56 0.00 0.00 3.16
397 398 6.607735 AATTTGTTTGCATTTCTGACTTGG 57.392 33.333 0.00 0.00 0.00 3.61
398 399 4.734398 TTGTTTGCATTTCTGACTTGGT 57.266 36.364 0.00 0.00 0.00 3.67
399 400 4.734398 TGTTTGCATTTCTGACTTGGTT 57.266 36.364 0.00 0.00 0.00 3.67
400 401 5.083533 TGTTTGCATTTCTGACTTGGTTT 57.916 34.783 0.00 0.00 0.00 3.27
401 402 5.486526 TGTTTGCATTTCTGACTTGGTTTT 58.513 33.333 0.00 0.00 0.00 2.43
402 403 5.350914 TGTTTGCATTTCTGACTTGGTTTTG 59.649 36.000 0.00 0.00 0.00 2.44
403 404 4.057406 TGCATTTCTGACTTGGTTTTGG 57.943 40.909 0.00 0.00 0.00 3.28
404 405 3.703556 TGCATTTCTGACTTGGTTTTGGA 59.296 39.130 0.00 0.00 0.00 3.53
405 406 4.161189 TGCATTTCTGACTTGGTTTTGGAA 59.839 37.500 0.00 0.00 0.00 3.53
406 407 4.507756 GCATTTCTGACTTGGTTTTGGAAC 59.492 41.667 0.00 0.00 34.96 3.62
407 408 5.682212 GCATTTCTGACTTGGTTTTGGAACT 60.682 40.000 0.00 0.00 36.03 3.01
408 409 5.993748 TTTCTGACTTGGTTTTGGAACTT 57.006 34.783 0.00 0.00 36.03 2.66
409 410 5.576447 TTCTGACTTGGTTTTGGAACTTC 57.424 39.130 0.00 0.00 36.03 3.01
410 411 4.594970 TCTGACTTGGTTTTGGAACTTCA 58.405 39.130 0.00 0.00 36.03 3.02
411 412 5.200483 TCTGACTTGGTTTTGGAACTTCAT 58.800 37.500 0.00 0.00 36.03 2.57
412 413 6.361433 TCTGACTTGGTTTTGGAACTTCATA 58.639 36.000 0.00 0.00 36.03 2.15
413 414 6.831353 TCTGACTTGGTTTTGGAACTTCATAA 59.169 34.615 0.00 0.00 36.03 1.90
414 415 7.340743 TCTGACTTGGTTTTGGAACTTCATAAA 59.659 33.333 0.00 0.00 36.03 1.40
415 416 7.841956 TGACTTGGTTTTGGAACTTCATAAAA 58.158 30.769 0.00 0.00 36.03 1.52
416 417 8.482128 TGACTTGGTTTTGGAACTTCATAAAAT 58.518 29.630 6.51 0.00 36.03 1.82
417 418 8.661352 ACTTGGTTTTGGAACTTCATAAAATG 57.339 30.769 6.51 0.00 36.03 2.32
418 419 8.264347 ACTTGGTTTTGGAACTTCATAAAATGT 58.736 29.630 6.51 3.35 36.03 2.71
419 420 9.108284 CTTGGTTTTGGAACTTCATAAAATGTT 57.892 29.630 6.51 0.00 36.03 2.71
420 421 8.430801 TGGTTTTGGAACTTCATAAAATGTTG 57.569 30.769 6.51 0.00 36.03 3.33
421 422 7.011857 TGGTTTTGGAACTTCATAAAATGTTGC 59.988 33.333 6.51 0.00 36.03 4.17
422 423 7.351981 GTTTTGGAACTTCATAAAATGTTGCC 58.648 34.615 6.51 0.00 32.91 4.52
423 424 4.804108 TGGAACTTCATAAAATGTTGCCG 58.196 39.130 0.00 0.00 31.34 5.69
424 425 4.279671 TGGAACTTCATAAAATGTTGCCGT 59.720 37.500 0.00 0.00 31.34 5.68
425 426 5.221342 TGGAACTTCATAAAATGTTGCCGTT 60.221 36.000 0.00 0.00 31.34 4.44
426 427 5.694458 GGAACTTCATAAAATGTTGCCGTTT 59.306 36.000 0.00 0.00 0.00 3.60
427 428 6.864165 GGAACTTCATAAAATGTTGCCGTTTA 59.136 34.615 0.00 0.00 0.00 2.01
428 429 7.382759 GGAACTTCATAAAATGTTGCCGTTTAA 59.617 33.333 0.00 0.00 0.00 1.52
429 430 8.649973 AACTTCATAAAATGTTGCCGTTTAAA 57.350 26.923 0.00 0.00 0.00 1.52
430 431 8.649973 ACTTCATAAAATGTTGCCGTTTAAAA 57.350 26.923 0.00 0.00 0.00 1.52
431 432 9.099454 ACTTCATAAAATGTTGCCGTTTAAAAA 57.901 25.926 0.00 0.00 0.00 1.94
521 522 9.965748 ATTCATAATTTCAAAAATAAAACCGCG 57.034 25.926 0.00 0.00 0.00 6.46
522 523 8.522178 TCATAATTTCAAAAATAAAACCGCGT 57.478 26.923 4.92 0.00 0.00 6.01
523 524 8.979574 TCATAATTTCAAAAATAAAACCGCGTT 58.020 25.926 4.92 0.00 0.00 4.84
524 525 9.245284 CATAATTTCAAAAATAAAACCGCGTTC 57.755 29.630 4.92 0.00 0.00 3.95
525 526 7.471657 AATTTCAAAAATAAAACCGCGTTCT 57.528 28.000 4.92 0.00 0.00 3.01
526 527 6.889019 TTTCAAAAATAAAACCGCGTTCTT 57.111 29.167 4.92 0.00 0.00 2.52
527 528 6.889019 TTCAAAAATAAAACCGCGTTCTTT 57.111 29.167 4.92 3.92 0.00 2.52
528 529 6.889019 TCAAAAATAAAACCGCGTTCTTTT 57.111 29.167 4.92 8.37 0.00 2.27
529 530 7.982371 TCAAAAATAAAACCGCGTTCTTTTA 57.018 28.000 4.92 10.31 0.00 1.52
530 531 8.052313 TCAAAAATAAAACCGCGTTCTTTTAG 57.948 30.769 4.92 0.00 0.00 1.85
531 532 6.996562 AAAATAAAACCGCGTTCTTTTAGG 57.003 33.333 4.92 0.00 0.00 2.69
532 533 5.945466 AATAAAACCGCGTTCTTTTAGGA 57.055 34.783 4.92 0.00 0.00 2.94
533 534 5.945466 ATAAAACCGCGTTCTTTTAGGAA 57.055 34.783 4.92 0.00 0.00 3.36
534 535 4.635833 AAAACCGCGTTCTTTTAGGAAA 57.364 36.364 4.92 0.00 0.00 3.13
535 536 4.841443 AAACCGCGTTCTTTTAGGAAAT 57.159 36.364 4.92 0.00 0.00 2.17
536 537 3.824414 ACCGCGTTCTTTTAGGAAATG 57.176 42.857 4.92 0.00 0.00 2.32
537 538 3.143728 ACCGCGTTCTTTTAGGAAATGT 58.856 40.909 4.92 0.00 0.00 2.71
538 539 3.566742 ACCGCGTTCTTTTAGGAAATGTT 59.433 39.130 4.92 0.00 0.00 2.71
539 540 4.756135 ACCGCGTTCTTTTAGGAAATGTTA 59.244 37.500 4.92 0.00 0.00 2.41
540 541 5.413523 ACCGCGTTCTTTTAGGAAATGTTAT 59.586 36.000 4.92 0.00 0.00 1.89
541 542 5.737290 CCGCGTTCTTTTAGGAAATGTTATG 59.263 40.000 4.92 0.00 0.00 1.90
542 543 6.402766 CCGCGTTCTTTTAGGAAATGTTATGA 60.403 38.462 4.92 0.00 0.00 2.15
543 544 7.186804 CGCGTTCTTTTAGGAAATGTTATGAT 58.813 34.615 0.00 0.00 0.00 2.45
544 545 7.696453 CGCGTTCTTTTAGGAAATGTTATGATT 59.304 33.333 0.00 0.00 0.00 2.57
545 546 9.353999 GCGTTCTTTTAGGAAATGTTATGATTT 57.646 29.630 0.00 0.00 0.00 2.17
570 571 7.953158 TTTCCAAAAATGTTTTCATATGCGA 57.047 28.000 0.00 0.00 39.94 5.10
571 572 7.953158 TTCCAAAAATGTTTTCATATGCGAA 57.047 28.000 0.00 0.00 39.94 4.70
572 573 7.344910 TCCAAAAATGTTTTCATATGCGAAC 57.655 32.000 11.74 11.74 39.94 3.95
573 574 6.088749 TCCAAAAATGTTTTCATATGCGAACG 59.911 34.615 13.05 0.00 39.94 3.95
574 575 5.434514 AAAATGTTTTCATATGCGAACGC 57.565 34.783 12.33 12.33 39.94 4.84
575 576 2.152237 TGTTTTCATATGCGAACGCG 57.848 45.000 3.53 3.53 45.51 6.01
576 577 1.201976 TGTTTTCATATGCGAACGCGG 60.202 47.619 12.47 0.00 45.51 6.46
577 578 0.247894 TTTTCATATGCGAACGCGGC 60.248 50.000 12.47 4.68 45.51 6.53
578 579 1.087202 TTTCATATGCGAACGCGGCT 61.087 50.000 12.47 0.00 45.51 5.52
579 580 1.087202 TTCATATGCGAACGCGGCTT 61.087 50.000 12.47 5.21 45.51 4.35
580 581 1.087202 TCATATGCGAACGCGGCTTT 61.087 50.000 12.47 0.00 45.51 3.51
581 582 0.925267 CATATGCGAACGCGGCTTTG 60.925 55.000 12.47 1.05 45.51 2.77
582 583 1.087202 ATATGCGAACGCGGCTTTGA 61.087 50.000 12.47 0.00 45.51 2.69
583 584 1.692148 TATGCGAACGCGGCTTTGAG 61.692 55.000 12.47 0.00 45.51 3.02
585 586 3.414700 CGAACGCGGCTTTGAGCT 61.415 61.111 12.47 0.00 41.99 4.09
586 587 2.476499 GAACGCGGCTTTGAGCTC 59.524 61.111 12.47 6.82 41.99 4.09
587 588 2.029844 GAACGCGGCTTTGAGCTCT 61.030 57.895 16.19 0.00 41.99 4.09
588 589 1.569479 GAACGCGGCTTTGAGCTCTT 61.569 55.000 16.19 0.00 41.99 2.85
589 590 0.320421 AACGCGGCTTTGAGCTCTTA 60.320 50.000 16.19 0.00 41.99 2.10
590 591 0.108138 ACGCGGCTTTGAGCTCTTAT 60.108 50.000 16.19 0.00 41.99 1.73
591 592 1.136305 ACGCGGCTTTGAGCTCTTATA 59.864 47.619 16.19 0.00 41.99 0.98
592 593 2.201732 CGCGGCTTTGAGCTCTTATAA 58.798 47.619 16.19 0.00 41.99 0.98
593 594 2.802816 CGCGGCTTTGAGCTCTTATAAT 59.197 45.455 16.19 0.00 41.99 1.28
594 595 3.987868 CGCGGCTTTGAGCTCTTATAATA 59.012 43.478 16.19 0.00 41.99 0.98
595 596 4.627467 CGCGGCTTTGAGCTCTTATAATAT 59.373 41.667 16.19 0.00 41.99 1.28
596 597 5.120830 CGCGGCTTTGAGCTCTTATAATATT 59.879 40.000 16.19 0.00 41.99 1.28
597 598 6.538444 GCGGCTTTGAGCTCTTATAATATTC 58.462 40.000 16.19 0.00 41.99 1.75
598 599 6.147821 GCGGCTTTGAGCTCTTATAATATTCA 59.852 38.462 16.19 0.00 41.99 2.57
599 600 7.513968 CGGCTTTGAGCTCTTATAATATTCAC 58.486 38.462 16.19 0.00 41.99 3.18
600 601 7.513968 GGCTTTGAGCTCTTATAATATTCACG 58.486 38.462 16.19 0.00 41.99 4.35
601 602 7.012358 GCTTTGAGCTCTTATAATATTCACGC 58.988 38.462 16.19 0.00 38.45 5.34
602 603 7.095439 GCTTTGAGCTCTTATAATATTCACGCT 60.095 37.037 16.19 0.00 38.45 5.07
603 604 9.411801 CTTTGAGCTCTTATAATATTCACGCTA 57.588 33.333 16.19 0.00 0.00 4.26
604 605 8.744008 TTGAGCTCTTATAATATTCACGCTAC 57.256 34.615 16.19 0.00 0.00 3.58
605 606 7.313646 TGAGCTCTTATAATATTCACGCTACC 58.686 38.462 16.19 0.00 0.00 3.18
606 607 7.176865 TGAGCTCTTATAATATTCACGCTACCT 59.823 37.037 16.19 0.00 0.00 3.08
607 608 8.577048 AGCTCTTATAATATTCACGCTACCTA 57.423 34.615 0.00 0.00 0.00 3.08
608 609 8.460428 AGCTCTTATAATATTCACGCTACCTAC 58.540 37.037 0.00 0.00 0.00 3.18
609 610 7.701501 GCTCTTATAATATTCACGCTACCTACC 59.298 40.741 0.00 0.00 0.00 3.18
610 611 8.640063 TCTTATAATATTCACGCTACCTACCA 57.360 34.615 0.00 0.00 0.00 3.25
611 612 9.251440 TCTTATAATATTCACGCTACCTACCAT 57.749 33.333 0.00 0.00 0.00 3.55
612 613 9.517609 CTTATAATATTCACGCTACCTACCATC 57.482 37.037 0.00 0.00 0.00 3.51
613 614 5.801531 AATATTCACGCTACCTACCATCA 57.198 39.130 0.00 0.00 0.00 3.07
614 615 3.735237 ATTCACGCTACCTACCATCAG 57.265 47.619 0.00 0.00 0.00 2.90
615 616 2.139323 TCACGCTACCTACCATCAGT 57.861 50.000 0.00 0.00 0.00 3.41
616 617 2.453521 TCACGCTACCTACCATCAGTT 58.546 47.619 0.00 0.00 0.00 3.16
617 618 3.623703 TCACGCTACCTACCATCAGTTA 58.376 45.455 0.00 0.00 0.00 2.24
618 619 3.379372 TCACGCTACCTACCATCAGTTAC 59.621 47.826 0.00 0.00 0.00 2.50
619 620 3.129813 CACGCTACCTACCATCAGTTACA 59.870 47.826 0.00 0.00 0.00 2.41
620 621 3.129988 ACGCTACCTACCATCAGTTACAC 59.870 47.826 0.00 0.00 0.00 2.90
621 622 3.490419 CGCTACCTACCATCAGTTACACC 60.490 52.174 0.00 0.00 0.00 4.16
622 623 3.449737 GCTACCTACCATCAGTTACACCA 59.550 47.826 0.00 0.00 0.00 4.17
623 624 3.975168 ACCTACCATCAGTTACACCAC 57.025 47.619 0.00 0.00 0.00 4.16
624 625 3.244582 ACCTACCATCAGTTACACCACA 58.755 45.455 0.00 0.00 0.00 4.17
625 626 3.007614 ACCTACCATCAGTTACACCACAC 59.992 47.826 0.00 0.00 0.00 3.82
626 627 2.561478 ACCATCAGTTACACCACACC 57.439 50.000 0.00 0.00 0.00 4.16
627 628 1.073284 ACCATCAGTTACACCACACCC 59.927 52.381 0.00 0.00 0.00 4.61
628 629 1.438651 CATCAGTTACACCACACCCG 58.561 55.000 0.00 0.00 0.00 5.28
629 630 1.053424 ATCAGTTACACCACACCCGT 58.947 50.000 0.00 0.00 0.00 5.28
630 631 0.390124 TCAGTTACACCACACCCGTC 59.610 55.000 0.00 0.00 0.00 4.79
631 632 0.391597 CAGTTACACCACACCCGTCT 59.608 55.000 0.00 0.00 0.00 4.18
632 633 0.391597 AGTTACACCACACCCGTCTG 59.608 55.000 0.00 0.00 0.00 3.51
633 634 0.601841 GTTACACCACACCCGTCTGG 60.602 60.000 0.00 0.00 41.37 3.86
642 643 2.923035 CCCGTCTGGTCCAGTGGT 60.923 66.667 23.03 0.00 32.61 4.16
643 644 2.343758 CCGTCTGGTCCAGTGGTG 59.656 66.667 18.65 7.04 32.61 4.17
644 645 2.507854 CCGTCTGGTCCAGTGGTGT 61.508 63.158 18.65 0.00 32.61 4.16
645 646 1.300931 CGTCTGGTCCAGTGGTGTG 60.301 63.158 18.65 0.00 32.61 3.82
646 647 1.598130 GTCTGGTCCAGTGGTGTGC 60.598 63.158 18.65 0.00 32.61 4.57
647 648 1.766059 TCTGGTCCAGTGGTGTGCT 60.766 57.895 18.65 0.00 32.61 4.40
648 649 1.598962 CTGGTCCAGTGGTGTGCTG 60.599 63.158 11.09 0.00 0.00 4.41
649 650 2.980233 GGTCCAGTGGTGTGCTGC 60.980 66.667 9.54 0.00 32.93 5.25
650 651 2.203195 GTCCAGTGGTGTGCTGCA 60.203 61.111 9.54 0.00 32.93 4.41
651 652 2.203195 TCCAGTGGTGTGCTGCAC 60.203 61.111 25.15 25.15 46.97 4.57
652 653 2.203252 CCAGTGGTGTGCTGCACT 60.203 61.111 30.43 9.89 46.86 4.40
653 654 2.256591 CCAGTGGTGTGCTGCACTC 61.257 63.158 30.43 26.47 46.86 3.51
654 655 1.524393 CAGTGGTGTGCTGCACTCA 60.524 57.895 30.43 24.44 46.86 3.41
655 656 1.524621 AGTGGTGTGCTGCACTCAC 60.525 57.895 32.00 32.00 46.86 3.51
658 659 3.647824 GTGTGCTGCACTCACCTC 58.352 61.111 30.43 12.04 44.41 3.85
659 660 2.029518 TGTGCTGCACTCACCTCG 59.970 61.111 30.43 0.00 35.11 4.63
660 661 2.340078 GTGCTGCACTCACCTCGA 59.660 61.111 24.68 0.00 0.00 4.04
661 662 1.300931 GTGCTGCACTCACCTCGAA 60.301 57.895 24.68 0.00 0.00 3.71
662 663 0.671781 GTGCTGCACTCACCTCGAAT 60.672 55.000 24.68 0.00 0.00 3.34
663 664 0.390340 TGCTGCACTCACCTCGAATC 60.390 55.000 0.00 0.00 0.00 2.52
664 665 1.086634 GCTGCACTCACCTCGAATCC 61.087 60.000 0.00 0.00 0.00 3.01
665 666 0.534412 CTGCACTCACCTCGAATCCT 59.466 55.000 0.00 0.00 0.00 3.24
666 667 0.532573 TGCACTCACCTCGAATCCTC 59.467 55.000 0.00 0.00 0.00 3.71
667 668 0.526524 GCACTCACCTCGAATCCTCG 60.527 60.000 0.00 0.00 46.87 4.63
668 669 0.526524 CACTCACCTCGAATCCTCGC 60.527 60.000 0.00 0.00 45.04 5.03
669 670 1.298713 CTCACCTCGAATCCTCGCG 60.299 63.158 0.00 0.00 45.04 5.87
672 673 4.951963 CCTCGAATCCTCGCGGCC 62.952 72.222 6.13 0.00 42.61 6.13
673 674 3.905678 CTCGAATCCTCGCGGCCT 61.906 66.667 6.13 0.00 45.04 5.19
674 675 3.832720 CTCGAATCCTCGCGGCCTC 62.833 68.421 6.13 0.00 45.04 4.70
675 676 3.905678 CGAATCCTCGCGGCCTCT 61.906 66.667 6.13 0.00 38.45 3.69
676 677 2.028337 GAATCCTCGCGGCCTCTC 59.972 66.667 6.13 0.00 0.00 3.20
677 678 2.443016 AATCCTCGCGGCCTCTCT 60.443 61.111 6.13 0.00 0.00 3.10
678 679 1.152735 AATCCTCGCGGCCTCTCTA 60.153 57.895 6.13 0.00 0.00 2.43
679 680 1.457009 AATCCTCGCGGCCTCTCTAC 61.457 60.000 6.13 0.00 0.00 2.59
680 681 2.346284 ATCCTCGCGGCCTCTCTACT 62.346 60.000 6.13 0.00 0.00 2.57
681 682 2.122167 CCTCGCGGCCTCTCTACTT 61.122 63.158 6.13 0.00 0.00 2.24
682 683 1.668101 CCTCGCGGCCTCTCTACTTT 61.668 60.000 6.13 0.00 0.00 2.66
683 684 0.173708 CTCGCGGCCTCTCTACTTTT 59.826 55.000 6.13 0.00 0.00 2.27
684 685 1.404391 CTCGCGGCCTCTCTACTTTTA 59.596 52.381 6.13 0.00 0.00 1.52
685 686 1.133790 TCGCGGCCTCTCTACTTTTAC 59.866 52.381 6.13 0.00 0.00 2.01
686 687 1.135199 CGCGGCCTCTCTACTTTTACA 60.135 52.381 0.00 0.00 0.00 2.41
687 688 2.481449 CGCGGCCTCTCTACTTTTACAT 60.481 50.000 0.00 0.00 0.00 2.29
688 689 3.124560 GCGGCCTCTCTACTTTTACATC 58.875 50.000 0.00 0.00 0.00 3.06
689 690 3.181474 GCGGCCTCTCTACTTTTACATCT 60.181 47.826 0.00 0.00 0.00 2.90
690 691 4.612943 CGGCCTCTCTACTTTTACATCTC 58.387 47.826 0.00 0.00 0.00 2.75
691 692 4.339814 CGGCCTCTCTACTTTTACATCTCT 59.660 45.833 0.00 0.00 0.00 3.10
692 693 5.506649 CGGCCTCTCTACTTTTACATCTCTC 60.507 48.000 0.00 0.00 0.00 3.20
693 694 5.596772 GGCCTCTCTACTTTTACATCTCTCT 59.403 44.000 0.00 0.00 0.00 3.10
694 695 6.097696 GGCCTCTCTACTTTTACATCTCTCTT 59.902 42.308 0.00 0.00 0.00 2.85
695 696 7.364320 GGCCTCTCTACTTTTACATCTCTCTTT 60.364 40.741 0.00 0.00 0.00 2.52
730 731 0.810031 CGTGGTCTTCTAATGGGCCG 60.810 60.000 0.00 0.00 0.00 6.13
768 769 0.370273 GTGCGTCGCTCCAACTATTG 59.630 55.000 19.50 0.00 0.00 1.90
776 777 4.319133 CCAACTATTGGCCGCAGT 57.681 55.556 0.00 0.00 45.17 4.40
779 780 1.603802 CCAACTATTGGCCGCAGTATG 59.396 52.381 0.00 2.98 45.17 2.39
818 819 3.512724 CCTGGGTTTACTCTAGAACCGAA 59.487 47.826 5.45 0.00 44.94 4.30
836 837 5.032220 ACCGAACAAATCAACGAAAGAAAC 58.968 37.500 0.00 0.00 0.00 2.78
854 1031 0.338814 ACCCGTCTTAGGACCAGGAT 59.661 55.000 13.76 0.00 39.15 3.24
877 1054 4.647615 CCGGCCCATACGAGCGAG 62.648 72.222 0.00 0.00 0.00 5.03
878 1055 3.900892 CGGCCCATACGAGCGAGT 61.901 66.667 0.00 0.00 0.00 4.18
879 1056 2.279517 GGCCCATACGAGCGAGTG 60.280 66.667 0.00 0.00 0.00 3.51
880 1057 2.962253 GCCCATACGAGCGAGTGC 60.962 66.667 0.00 0.00 43.24 4.40
910 1087 0.899720 ACAGGACGGATCGCCTAAAA 59.100 50.000 0.70 0.00 33.30 1.52
1033 1212 0.824759 AGCCAGTCAATACTCCCGTC 59.175 55.000 0.00 0.00 31.97 4.79
1074 1253 2.025969 CCTCTCACAGCTGCACACG 61.026 63.158 15.27 0.00 0.00 4.49
1416 1596 2.436824 GGCCGAGGAGCTGAAACC 60.437 66.667 0.00 0.00 0.00 3.27
1481 1661 6.054860 CTCCTTCAGAATTTTGGAGGACTA 57.945 41.667 19.84 2.95 45.94 2.59
1664 2318 7.334171 CACACATTTGATACCAGACACTATTCA 59.666 37.037 0.00 0.00 0.00 2.57
1817 2481 9.855021 AACTGATTTATTTTGCCTATGTAACAC 57.145 29.630 0.00 0.00 0.00 3.32
1993 2707 3.926821 TGCCTTCGGAAATGTTTAACC 57.073 42.857 0.00 0.00 0.00 2.85
2129 2851 2.744202 CTCAATTCTCACCCCTGTTTCG 59.256 50.000 0.00 0.00 0.00 3.46
2147 2869 7.148672 CCTGTTTCGCATGATTCACTATAGATC 60.149 40.741 6.78 0.00 0.00 2.75
2175 2898 4.903045 AAGATACTTTTCGTCTTGGGGA 57.097 40.909 0.00 0.00 31.41 4.81
2177 2900 6.555463 AAGATACTTTTCGTCTTGGGGATA 57.445 37.500 0.00 0.00 31.41 2.59
2261 2988 5.708697 TCATTCAGTTGACTCAGCAATTGAT 59.291 36.000 10.34 0.00 41.87 2.57
2354 3081 9.376075 CTAATTAGAGAATTTGACTTCTGCTCA 57.624 33.333 6.64 0.00 35.63 4.26
2412 3139 5.597806 ACTTTTAGGCTTTGTTTTGGCTAC 58.402 37.500 0.00 0.00 40.28 3.58
2484 3211 2.623416 GTGCAGTTTTTCTAAGTGCCCT 59.377 45.455 13.09 0.00 43.90 5.19
2497 3224 3.067684 AGTGCCCTTGGTGTACATTAC 57.932 47.619 0.00 0.00 0.00 1.89
2550 3277 8.894768 ACTAATATCAGCAATACCTTCTGAAC 57.105 34.615 0.00 0.00 39.88 3.18
2641 3368 3.809918 TTAATTCGTTGGCCGTTGTAC 57.190 42.857 0.00 0.00 37.94 2.90
2654 3381 4.989168 GGCCGTTGTACTGAAATAGGATAG 59.011 45.833 0.00 0.00 0.00 2.08
2822 3550 8.843885 ACTAAACTGTTTGTAGGGAAATACTC 57.156 34.615 15.69 0.00 0.00 2.59
2823 3551 7.881751 ACTAAACTGTTTGTAGGGAAATACTCC 59.118 37.037 15.69 0.00 44.54 3.85
2832 3560 2.616634 GGAAATACTCCCTCCGTTCC 57.383 55.000 0.00 0.00 38.44 3.62
2833 3561 1.835531 GGAAATACTCCCTCCGTTCCA 59.164 52.381 0.00 0.00 38.44 3.53
2834 3562 2.237893 GGAAATACTCCCTCCGTTCCAA 59.762 50.000 0.00 0.00 38.44 3.53
2835 3563 3.307904 GGAAATACTCCCTCCGTTCCAAA 60.308 47.826 0.00 0.00 38.44 3.28
2836 3564 4.329392 GAAATACTCCCTCCGTTCCAAAA 58.671 43.478 0.00 0.00 0.00 2.44
2837 3565 4.586306 AATACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
2838 3566 5.703730 AATACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
2839 3567 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2840 3568 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2841 3569 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2842 3570 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2843 3571 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
2844 3572 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
2845 3573 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
2846 3574 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
2847 3575 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
2848 3576 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
2849 3577 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
2850 3578 5.411361 CCGTTCCAAAATAGATGACTCAACA 59.589 40.000 0.00 0.00 0.00 3.33
2851 3579 6.094048 CCGTTCCAAAATAGATGACTCAACAT 59.906 38.462 0.00 0.00 0.00 2.71
2852 3580 7.362056 CCGTTCCAAAATAGATGACTCAACATT 60.362 37.037 0.00 0.00 0.00 2.71
2853 3581 7.482743 CGTTCCAAAATAGATGACTCAACATTG 59.517 37.037 0.00 0.00 0.00 2.82
2854 3582 8.299570 GTTCCAAAATAGATGACTCAACATTGT 58.700 33.333 0.00 0.00 0.00 2.71
2855 3583 9.513906 TTCCAAAATAGATGACTCAACATTGTA 57.486 29.630 0.00 0.00 0.00 2.41
2856 3584 8.946085 TCCAAAATAGATGACTCAACATTGTAC 58.054 33.333 0.00 0.00 0.00 2.90
2857 3585 8.950210 CCAAAATAGATGACTCAACATTGTACT 58.050 33.333 0.00 0.00 0.00 2.73
2866 3594 9.998106 ATGACTCAACATTGTACTAACTTTAGT 57.002 29.630 6.85 6.85 45.39 2.24
2888 3616 7.797038 AGTACAAAGTTAGTACAAAGTTGGG 57.203 36.000 6.30 0.00 43.24 4.12
2889 3617 7.341030 AGTACAAAGTTAGTACAAAGTTGGGT 58.659 34.615 6.30 0.00 43.24 4.51
2890 3618 6.688637 ACAAAGTTAGTACAAAGTTGGGTC 57.311 37.500 0.00 0.00 0.00 4.46
2891 3619 6.181908 ACAAAGTTAGTACAAAGTTGGGTCA 58.818 36.000 0.00 0.00 0.00 4.02
2892 3620 6.831868 ACAAAGTTAGTACAAAGTTGGGTCAT 59.168 34.615 0.00 0.00 0.00 3.06
2893 3621 7.012989 ACAAAGTTAGTACAAAGTTGGGTCATC 59.987 37.037 0.00 0.00 0.00 2.92
2894 3622 6.435292 AGTTAGTACAAAGTTGGGTCATCT 57.565 37.500 0.00 0.00 0.00 2.90
2895 3623 7.549147 AGTTAGTACAAAGTTGGGTCATCTA 57.451 36.000 0.00 0.00 0.00 1.98
2896 3624 8.147244 AGTTAGTACAAAGTTGGGTCATCTAT 57.853 34.615 0.00 0.00 0.00 1.98
2897 3625 8.603304 AGTTAGTACAAAGTTGGGTCATCTATT 58.397 33.333 0.00 0.00 0.00 1.73
2898 3626 9.227777 GTTAGTACAAAGTTGGGTCATCTATTT 57.772 33.333 0.00 0.00 0.00 1.40
2899 3627 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
2900 3628 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
2901 3629 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
2902 3630 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
2903 3631 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
2904 3632 7.070571 ACAAAGTTGGGTCATCTATTTTGGAAA 59.929 33.333 0.00 0.00 0.00 3.13
2905 3633 6.840780 AGTTGGGTCATCTATTTTGGAAAG 57.159 37.500 0.00 0.00 0.00 2.62
2906 3634 5.716703 AGTTGGGTCATCTATTTTGGAAAGG 59.283 40.000 0.00 0.00 0.00 3.11
2907 3635 5.528600 TGGGTCATCTATTTTGGAAAGGA 57.471 39.130 0.00 0.00 0.00 3.36
2908 3636 5.509498 TGGGTCATCTATTTTGGAAAGGAG 58.491 41.667 0.00 0.00 0.00 3.69
2909 3637 4.889995 GGGTCATCTATTTTGGAAAGGAGG 59.110 45.833 0.00 0.00 0.00 4.30
2910 3638 4.889995 GGTCATCTATTTTGGAAAGGAGGG 59.110 45.833 0.00 0.00 0.00 4.30
2911 3639 5.340027 GGTCATCTATTTTGGAAAGGAGGGA 60.340 44.000 0.00 0.00 0.00 4.20
2912 3640 5.825151 GTCATCTATTTTGGAAAGGAGGGAG 59.175 44.000 0.00 0.00 0.00 4.30
3003 3858 5.753921 AGAACAAAGTTTCTGGTAAGTCTCG 59.246 40.000 0.00 0.00 34.40 4.04
3007 3862 3.498334 AGTTTCTGGTAAGTCTCGTCCT 58.502 45.455 0.00 0.00 0.00 3.85
3029 3884 8.354426 GTCCTCAGTTCAGTTCTTATATCTACC 58.646 40.741 0.00 0.00 0.00 3.18
3273 4485 6.834969 TGCATAAAGATGGGAATTCTGATTCA 59.165 34.615 5.23 0.00 37.48 2.57
3384 4599 7.036220 TCTACACTTAATCTAACAAGCTCTGC 58.964 38.462 0.00 0.00 0.00 4.26
3473 4688 6.313164 GGCAAACTACATACAAGAGTAACCTC 59.687 42.308 0.00 0.00 38.04 3.85
3796 5506 9.507280 CTATCAGTGTTAGCCATTTGTTATTTG 57.493 33.333 0.00 0.00 0.00 2.32
3906 5618 8.918202 TGGTTCTCACACTTAATTATGACTTT 57.082 30.769 5.43 0.00 0.00 2.66
3907 5619 9.349713 TGGTTCTCACACTTAATTATGACTTTT 57.650 29.630 5.43 0.00 0.00 2.27
4136 5857 4.651317 GCAGCTATTGCGAACACG 57.349 55.556 0.00 0.00 44.09 4.49
4407 6152 1.738099 GCGGCTGTGAATGACTCGT 60.738 57.895 0.00 0.00 0.00 4.18
4620 6371 1.001406 GCACAGTAGCACTCTCCAGTT 59.999 52.381 0.00 0.00 0.00 3.16
4752 6515 4.330944 TGTGTTCCTGTCGAATACAACT 57.669 40.909 0.30 0.00 46.09 3.16
4821 6602 1.040339 TCTTTGTGGCGTTTTGGGCT 61.040 50.000 0.00 0.00 0.00 5.19
4864 6645 5.751243 TCTTGGAGCTGTTTTCTTTGTAC 57.249 39.130 0.00 0.00 0.00 2.90
4865 6646 5.437060 TCTTGGAGCTGTTTTCTTTGTACT 58.563 37.500 0.00 0.00 0.00 2.73
4866 6647 5.885912 TCTTGGAGCTGTTTTCTTTGTACTT 59.114 36.000 0.00 0.00 0.00 2.24
4867 6648 7.051623 TCTTGGAGCTGTTTTCTTTGTACTTA 58.948 34.615 0.00 0.00 0.00 2.24
4965 6746 1.133823 TCGTTGCAGCCATTATCCCAT 60.134 47.619 0.00 0.00 0.00 4.00
5024 6805 9.901724 GTTAACATAAATGACTCGTATCTTGTG 57.098 33.333 0.00 0.00 0.00 3.33
5029 6810 1.269166 GACTCGTATCTTGTGCACCG 58.731 55.000 15.69 9.54 0.00 4.94
5030 6811 0.108804 ACTCGTATCTTGTGCACCGG 60.109 55.000 15.69 0.00 0.00 5.28
5050 6831 5.357032 ACCGGCATAATTTCTTGGAAACTAG 59.643 40.000 0.00 0.00 34.24 2.57
5051 6832 5.357032 CCGGCATAATTTCTTGGAAACTAGT 59.643 40.000 0.00 0.00 34.59 2.57
5053 6834 7.228706 CCGGCATAATTTCTTGGAAACTAGTAT 59.771 37.037 0.00 0.00 34.59 2.12
5054 6835 8.070171 CGGCATAATTTCTTGGAAACTAGTATG 58.930 37.037 0.00 0.00 34.59 2.39
5055 6836 9.120538 GGCATAATTTCTTGGAAACTAGTATGA 57.879 33.333 0.00 0.00 34.59 2.15
5090 6871 4.669206 TGCAAAAATGAAAGAGCAAGGA 57.331 36.364 0.00 0.00 0.00 3.36
5136 6917 5.766174 ACTTATCGTTTCTTTAGGCCACAAA 59.234 36.000 5.01 3.68 0.00 2.83
5147 6928 7.630082 TCTTTAGGCCACAAATGATTACTACT 58.370 34.615 5.01 0.00 0.00 2.57
5150 6931 6.808321 AGGCCACAAATGATTACTACTCTA 57.192 37.500 5.01 0.00 0.00 2.43
5151 6932 7.380423 AGGCCACAAATGATTACTACTCTAT 57.620 36.000 5.01 0.00 0.00 1.98
5232 7013 1.418264 TGATTGAAACCGGGAGACACA 59.582 47.619 6.32 0.00 0.00 3.72
5233 7014 1.804748 GATTGAAACCGGGAGACACAC 59.195 52.381 6.32 0.00 0.00 3.82
5247 7028 5.057149 GGAGACACACATCCAATATGGTAC 58.943 45.833 0.00 0.00 39.03 3.34
5248 7029 5.036117 AGACACACATCCAATATGGTACC 57.964 43.478 4.43 4.43 39.03 3.34
5253 7034 2.986728 ACATCCAATATGGTACCCCCTC 59.013 50.000 10.07 0.00 39.03 4.30
5254 7035 2.127651 TCCAATATGGTACCCCCTCC 57.872 55.000 10.07 0.00 39.03 4.30
5255 7036 0.690762 CCAATATGGTACCCCCTCCG 59.309 60.000 10.07 0.00 31.35 4.63
5271 7052 3.442977 CCCTCCGTCCCGTAATATAAGAG 59.557 52.174 0.00 0.00 0.00 2.85
5278 7061 6.347402 CCGTCCCGTAATATAAGAGCATTTTG 60.347 42.308 0.00 0.00 0.00 2.44
5307 7090 9.401058 ACTTTAGGGAATGTAATTTGAGATCTG 57.599 33.333 0.00 0.00 36.07 2.90
5308 7091 8.752005 TTTAGGGAATGTAATTTGAGATCTGG 57.248 34.615 0.00 0.00 36.07 3.86
5309 7092 5.699143 AGGGAATGTAATTTGAGATCTGGG 58.301 41.667 0.00 0.00 36.07 4.45
5315 7098 5.324409 TGTAATTTGAGATCTGGGCAAAGT 58.676 37.500 0.00 6.76 35.29 2.66
5316 7099 5.415701 TGTAATTTGAGATCTGGGCAAAGTC 59.584 40.000 10.48 6.17 35.29 3.01
5317 7100 2.099141 TTGAGATCTGGGCAAAGTCG 57.901 50.000 0.00 0.00 0.00 4.18
5328 7111 2.287608 GGGCAAAGTCGAAGAAACAAGG 60.288 50.000 0.00 0.00 39.69 3.61
5334 7117 5.485662 AAGTCGAAGAAACAAGGTTCAAG 57.514 39.130 0.17 0.00 39.69 3.02
5469 7254 2.662156 GCGTTCTCGTTCTTGTTAGAGG 59.338 50.000 0.00 0.00 39.49 3.69
5516 7301 1.140161 CGGCGATGTCCCTTCGTAA 59.860 57.895 0.00 0.00 38.81 3.18
5550 7335 1.755393 ATGTTCTATCCCCGTCCCGC 61.755 60.000 0.00 0.00 0.00 6.13
5630 7415 1.179152 TTCGGTCGATGCTGGTCTTA 58.821 50.000 0.00 0.00 0.00 2.10
5645 7430 5.163301 GCTGGTCTTAGGTGGATCTATTTGA 60.163 44.000 0.00 0.00 0.00 2.69
5720 7525 0.249447 TCATCGGCGATGGTTGCTAG 60.249 55.000 39.82 19.27 40.15 3.42
5721 7526 0.530650 CATCGGCGATGGTTGCTAGT 60.531 55.000 35.72 4.12 36.51 2.57
5722 7527 1.037493 ATCGGCGATGGTTGCTAGTA 58.963 50.000 23.36 0.00 0.00 1.82
5755 7569 2.056577 GGTCCTTAACACGACGACTTG 58.943 52.381 0.00 0.00 0.00 3.16
5758 7572 1.604693 CCTTAACACGACGACTTGCCT 60.605 52.381 0.00 0.00 0.00 4.75
5864 7683 1.604308 TCGTCGCTAGGTGGTCCAA 60.604 57.895 0.00 0.00 35.89 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 163 9.981114 AAGAACATTACTTGAAATTTCCGAAAT 57.019 25.926 15.48 0.17 0.00 2.17
163 164 9.243637 CAAGAACATTACTTGAAATTTCCGAAA 57.756 29.630 15.48 2.79 44.92 3.46
164 165 7.865385 CCAAGAACATTACTTGAAATTTCCGAA 59.135 33.333 15.48 3.48 44.92 4.30
165 166 7.013846 ACCAAGAACATTACTTGAAATTTCCGA 59.986 33.333 15.48 3.72 44.92 4.55
166 167 7.145323 ACCAAGAACATTACTTGAAATTTCCG 58.855 34.615 15.48 9.04 44.92 4.30
167 168 8.887036 AACCAAGAACATTACTTGAAATTTCC 57.113 30.769 15.48 0.00 44.92 3.13
169 170 9.883142 TGAAACCAAGAACATTACTTGAAATTT 57.117 25.926 0.00 0.00 44.92 1.82
170 171 9.883142 TTGAAACCAAGAACATTACTTGAAATT 57.117 25.926 0.00 0.00 44.92 1.82
171 172 9.883142 TTTGAAACCAAGAACATTACTTGAAAT 57.117 25.926 0.00 0.00 44.92 2.17
172 173 9.712305 TTTTGAAACCAAGAACATTACTTGAAA 57.288 25.926 0.00 0.00 44.92 2.69
173 174 9.364989 CTTTTGAAACCAAGAACATTACTTGAA 57.635 29.630 0.00 0.00 44.92 2.69
174 175 8.527810 ACTTTTGAAACCAAGAACATTACTTGA 58.472 29.630 0.00 0.00 44.92 3.02
175 176 8.702163 ACTTTTGAAACCAAGAACATTACTTG 57.298 30.769 0.00 0.00 42.72 3.16
176 177 9.150348 CAACTTTTGAAACCAAGAACATTACTT 57.850 29.630 0.00 0.00 0.00 2.24
177 178 8.311109 ACAACTTTTGAAACCAAGAACATTACT 58.689 29.630 0.00 0.00 0.00 2.24
178 179 8.474006 ACAACTTTTGAAACCAAGAACATTAC 57.526 30.769 0.00 0.00 0.00 1.89
179 180 9.145865 GAACAACTTTTGAAACCAAGAACATTA 57.854 29.630 0.00 0.00 0.00 1.90
180 181 7.148656 CGAACAACTTTTGAAACCAAGAACATT 60.149 33.333 0.00 0.00 0.00 2.71
181 182 6.310224 CGAACAACTTTTGAAACCAAGAACAT 59.690 34.615 0.00 0.00 0.00 2.71
182 183 5.631512 CGAACAACTTTTGAAACCAAGAACA 59.368 36.000 0.00 0.00 0.00 3.18
183 184 5.061684 CCGAACAACTTTTGAAACCAAGAAC 59.938 40.000 0.00 0.00 0.00 3.01
184 185 5.047943 TCCGAACAACTTTTGAAACCAAGAA 60.048 36.000 0.00 0.00 0.00 2.52
185 186 4.459685 TCCGAACAACTTTTGAAACCAAGA 59.540 37.500 0.00 0.00 0.00 3.02
186 187 4.739195 TCCGAACAACTTTTGAAACCAAG 58.261 39.130 0.00 0.00 0.00 3.61
187 188 4.218852 ACTCCGAACAACTTTTGAAACCAA 59.781 37.500 0.00 0.00 0.00 3.67
188 189 3.759618 ACTCCGAACAACTTTTGAAACCA 59.240 39.130 0.00 0.00 0.00 3.67
189 190 4.102649 CACTCCGAACAACTTTTGAAACC 58.897 43.478 0.00 0.00 0.00 3.27
190 191 4.729595 ACACTCCGAACAACTTTTGAAAC 58.270 39.130 0.00 0.00 0.00 2.78
191 192 5.379732 AACACTCCGAACAACTTTTGAAA 57.620 34.783 0.00 0.00 0.00 2.69
192 193 5.379732 AAACACTCCGAACAACTTTTGAA 57.620 34.783 0.00 0.00 0.00 2.69
193 194 5.379732 AAAACACTCCGAACAACTTTTGA 57.620 34.783 0.00 0.00 0.00 2.69
194 195 5.404066 ACAAAAACACTCCGAACAACTTTTG 59.596 36.000 0.00 0.00 38.10 2.44
195 196 5.534407 ACAAAAACACTCCGAACAACTTTT 58.466 33.333 0.00 0.00 0.00 2.27
196 197 5.128992 ACAAAAACACTCCGAACAACTTT 57.871 34.783 0.00 0.00 0.00 2.66
197 198 4.776795 ACAAAAACACTCCGAACAACTT 57.223 36.364 0.00 0.00 0.00 2.66
198 199 4.216687 TGAACAAAAACACTCCGAACAACT 59.783 37.500 0.00 0.00 0.00 3.16
199 200 4.477780 TGAACAAAAACACTCCGAACAAC 58.522 39.130 0.00 0.00 0.00 3.32
200 201 4.768130 TGAACAAAAACACTCCGAACAA 57.232 36.364 0.00 0.00 0.00 2.83
201 202 4.768130 TTGAACAAAAACACTCCGAACA 57.232 36.364 0.00 0.00 0.00 3.18
202 203 5.099575 ACATTGAACAAAAACACTCCGAAC 58.900 37.500 0.00 0.00 0.00 3.95
203 204 5.317733 ACATTGAACAAAAACACTCCGAA 57.682 34.783 0.00 0.00 0.00 4.30
204 205 4.974368 ACATTGAACAAAAACACTCCGA 57.026 36.364 0.00 0.00 0.00 4.55
205 206 6.090088 TGAAAACATTGAACAAAAACACTCCG 59.910 34.615 0.00 0.00 0.00 4.63
206 207 7.095439 TGTGAAAACATTGAACAAAAACACTCC 60.095 33.333 0.00 0.00 0.00 3.85
207 208 7.791949 TGTGAAAACATTGAACAAAAACACTC 58.208 30.769 0.00 0.00 0.00 3.51
208 209 7.721286 TGTGAAAACATTGAACAAAAACACT 57.279 28.000 0.00 0.00 0.00 3.55
209 210 8.067189 AGTTGTGAAAACATTGAACAAAAACAC 58.933 29.630 0.00 0.00 32.92 3.32
210 211 8.147642 AGTTGTGAAAACATTGAACAAAAACA 57.852 26.923 0.00 0.00 32.92 2.83
211 212 9.444534 AAAGTTGTGAAAACATTGAACAAAAAC 57.555 25.926 0.00 0.00 32.92 2.43
213 214 9.657121 GAAAAGTTGTGAAAACATTGAACAAAA 57.343 25.926 0.00 0.00 32.92 2.44
214 215 9.050601 AGAAAAGTTGTGAAAACATTGAACAAA 57.949 25.926 0.00 0.00 32.92 2.83
215 216 8.600449 AGAAAAGTTGTGAAAACATTGAACAA 57.400 26.923 0.00 0.00 0.00 2.83
216 217 9.698309 TTAGAAAAGTTGTGAAAACATTGAACA 57.302 25.926 0.00 0.00 0.00 3.18
299 300 9.786105 GTGAACAATTTTTGAAATTCCAACATT 57.214 25.926 0.00 0.00 0.00 2.71
300 301 8.954350 TGTGAACAATTTTTGAAATTCCAACAT 58.046 25.926 0.00 0.00 0.00 2.71
301 302 8.327941 TGTGAACAATTTTTGAAATTCCAACA 57.672 26.923 0.00 0.00 0.00 3.33
302 303 9.617975 TTTGTGAACAATTTTTGAAATTCCAAC 57.382 25.926 0.00 0.00 35.55 3.77
334 335 9.670719 ACAAAATTCGAAACACAAAACATTTTT 57.329 22.222 0.00 0.00 0.00 1.94
335 336 9.670719 AACAAAATTCGAAACACAAAACATTTT 57.329 22.222 0.00 0.00 0.00 1.82
336 337 9.323963 GAACAAAATTCGAAACACAAAACATTT 57.676 25.926 0.00 0.00 0.00 2.32
337 338 8.499162 TGAACAAAATTCGAAACACAAAACATT 58.501 25.926 0.00 0.00 0.00 2.71
338 339 8.023050 TGAACAAAATTCGAAACACAAAACAT 57.977 26.923 0.00 0.00 0.00 2.71
339 340 7.359598 CCTGAACAAAATTCGAAACACAAAACA 60.360 33.333 0.00 0.00 0.00 2.83
340 341 6.953189 CCTGAACAAAATTCGAAACACAAAAC 59.047 34.615 0.00 0.00 0.00 2.43
341 342 6.868864 TCCTGAACAAAATTCGAAACACAAAA 59.131 30.769 0.00 0.00 0.00 2.44
342 343 6.390721 TCCTGAACAAAATTCGAAACACAAA 58.609 32.000 0.00 0.00 0.00 2.83
343 344 5.955488 TCCTGAACAAAATTCGAAACACAA 58.045 33.333 0.00 0.00 0.00 3.33
344 345 5.124776 ACTCCTGAACAAAATTCGAAACACA 59.875 36.000 0.00 0.00 0.00 3.72
345 346 5.578776 ACTCCTGAACAAAATTCGAAACAC 58.421 37.500 0.00 0.00 0.00 3.32
346 347 5.828299 ACTCCTGAACAAAATTCGAAACA 57.172 34.783 0.00 0.00 0.00 2.83
347 348 6.750039 TGAAACTCCTGAACAAAATTCGAAAC 59.250 34.615 0.00 0.00 0.00 2.78
348 349 6.857956 TGAAACTCCTGAACAAAATTCGAAA 58.142 32.000 0.00 0.00 0.00 3.46
349 350 6.443934 TGAAACTCCTGAACAAAATTCGAA 57.556 33.333 0.00 0.00 0.00 3.71
350 351 6.443934 TTGAAACTCCTGAACAAAATTCGA 57.556 33.333 0.00 0.00 0.00 3.71
351 352 7.518731 TTTTGAAACTCCTGAACAAAATTCG 57.481 32.000 0.00 0.00 36.16 3.34
354 355 9.230122 ACAAATTTTGAAACTCCTGAACAAAAT 57.770 25.926 15.81 0.00 46.11 1.82
355 356 8.614469 ACAAATTTTGAAACTCCTGAACAAAA 57.386 26.923 15.81 0.00 41.98 2.44
356 357 8.614469 AACAAATTTTGAAACTCCTGAACAAA 57.386 26.923 15.81 0.00 0.00 2.83
357 358 8.502387 CAAACAAATTTTGAAACTCCTGAACAA 58.498 29.630 15.81 0.00 0.00 2.83
358 359 7.360776 GCAAACAAATTTTGAAACTCCTGAACA 60.361 33.333 15.81 0.00 0.00 3.18
359 360 6.960992 GCAAACAAATTTTGAAACTCCTGAAC 59.039 34.615 15.81 0.00 0.00 3.18
360 361 6.652481 TGCAAACAAATTTTGAAACTCCTGAA 59.348 30.769 15.81 0.00 0.00 3.02
361 362 6.169094 TGCAAACAAATTTTGAAACTCCTGA 58.831 32.000 15.81 0.00 0.00 3.86
362 363 6.419980 TGCAAACAAATTTTGAAACTCCTG 57.580 33.333 15.81 3.69 0.00 3.86
363 364 7.628769 AATGCAAACAAATTTTGAAACTCCT 57.371 28.000 15.81 0.00 0.00 3.69
364 365 8.183536 AGAAATGCAAACAAATTTTGAAACTCC 58.816 29.630 15.81 0.57 0.00 3.85
365 366 9.002080 CAGAAATGCAAACAAATTTTGAAACTC 57.998 29.630 15.81 2.19 0.00 3.01
366 367 8.728833 TCAGAAATGCAAACAAATTTTGAAACT 58.271 25.926 15.81 0.00 0.00 2.66
367 368 8.787884 GTCAGAAATGCAAACAAATTTTGAAAC 58.212 29.630 15.81 3.35 0.00 2.78
368 369 8.728833 AGTCAGAAATGCAAACAAATTTTGAAA 58.271 25.926 15.81 0.00 0.00 2.69
369 370 8.266392 AGTCAGAAATGCAAACAAATTTTGAA 57.734 26.923 15.81 0.00 0.00 2.69
370 371 7.846644 AGTCAGAAATGCAAACAAATTTTGA 57.153 28.000 15.81 0.00 0.00 2.69
371 372 7.429920 CCAAGTCAGAAATGCAAACAAATTTTG 59.570 33.333 7.59 7.59 0.00 2.44
372 373 7.121020 ACCAAGTCAGAAATGCAAACAAATTTT 59.879 29.630 0.00 0.00 0.00 1.82
373 374 6.598850 ACCAAGTCAGAAATGCAAACAAATTT 59.401 30.769 0.00 0.00 0.00 1.82
374 375 6.114767 ACCAAGTCAGAAATGCAAACAAATT 58.885 32.000 0.00 0.00 0.00 1.82
375 376 5.673514 ACCAAGTCAGAAATGCAAACAAAT 58.326 33.333 0.00 0.00 0.00 2.32
376 377 5.083533 ACCAAGTCAGAAATGCAAACAAA 57.916 34.783 0.00 0.00 0.00 2.83
377 378 4.734398 ACCAAGTCAGAAATGCAAACAA 57.266 36.364 0.00 0.00 0.00 2.83
378 379 4.734398 AACCAAGTCAGAAATGCAAACA 57.266 36.364 0.00 0.00 0.00 2.83
379 380 5.220643 CCAAAACCAAGTCAGAAATGCAAAC 60.221 40.000 0.00 0.00 0.00 2.93
380 381 4.874966 CCAAAACCAAGTCAGAAATGCAAA 59.125 37.500 0.00 0.00 0.00 3.68
381 382 4.161189 TCCAAAACCAAGTCAGAAATGCAA 59.839 37.500 0.00 0.00 0.00 4.08
382 383 3.703556 TCCAAAACCAAGTCAGAAATGCA 59.296 39.130 0.00 0.00 0.00 3.96
383 384 4.320608 TCCAAAACCAAGTCAGAAATGC 57.679 40.909 0.00 0.00 0.00 3.56
384 385 5.906073 AGTTCCAAAACCAAGTCAGAAATG 58.094 37.500 0.00 0.00 35.92 2.32
385 386 6.154363 TGAAGTTCCAAAACCAAGTCAGAAAT 59.846 34.615 0.00 0.00 35.92 2.17
386 387 5.478679 TGAAGTTCCAAAACCAAGTCAGAAA 59.521 36.000 0.00 0.00 35.92 2.52
387 388 5.013547 TGAAGTTCCAAAACCAAGTCAGAA 58.986 37.500 0.00 0.00 35.92 3.02
388 389 4.594970 TGAAGTTCCAAAACCAAGTCAGA 58.405 39.130 0.00 0.00 35.92 3.27
389 390 4.981806 TGAAGTTCCAAAACCAAGTCAG 57.018 40.909 0.00 0.00 35.92 3.51
390 391 7.411486 TTTATGAAGTTCCAAAACCAAGTCA 57.589 32.000 0.00 0.00 35.92 3.41
391 392 8.764287 CATTTTATGAAGTTCCAAAACCAAGTC 58.236 33.333 12.25 0.00 35.92 3.01
392 393 8.264347 ACATTTTATGAAGTTCCAAAACCAAGT 58.736 29.630 12.25 8.02 35.92 3.16
393 394 8.661352 ACATTTTATGAAGTTCCAAAACCAAG 57.339 30.769 12.25 7.60 35.92 3.61
394 395 8.887717 CAACATTTTATGAAGTTCCAAAACCAA 58.112 29.630 12.25 0.00 35.92 3.67
395 396 7.011857 GCAACATTTTATGAAGTTCCAAAACCA 59.988 33.333 12.25 0.00 35.92 3.67
396 397 7.351981 GCAACATTTTATGAAGTTCCAAAACC 58.648 34.615 12.25 0.86 35.92 3.27
397 398 7.351981 GGCAACATTTTATGAAGTTCCAAAAC 58.648 34.615 12.25 3.34 35.50 2.43
398 399 6.201806 CGGCAACATTTTATGAAGTTCCAAAA 59.798 34.615 12.34 12.34 0.00 2.44
399 400 5.694006 CGGCAACATTTTATGAAGTTCCAAA 59.306 36.000 0.00 0.00 0.00 3.28
400 401 5.221342 ACGGCAACATTTTATGAAGTTCCAA 60.221 36.000 0.00 0.00 0.00 3.53
401 402 4.279671 ACGGCAACATTTTATGAAGTTCCA 59.720 37.500 0.00 0.00 0.00 3.53
402 403 4.805219 ACGGCAACATTTTATGAAGTTCC 58.195 39.130 0.00 0.00 0.00 3.62
403 404 6.763303 AAACGGCAACATTTTATGAAGTTC 57.237 33.333 0.00 0.00 0.00 3.01
404 405 8.649973 TTTAAACGGCAACATTTTATGAAGTT 57.350 26.923 0.00 0.00 0.00 2.66
405 406 8.649973 TTTTAAACGGCAACATTTTATGAAGT 57.350 26.923 0.00 0.00 0.00 3.01
495 496 9.965748 CGCGGTTTTATTTTTGAAATTATGAAT 57.034 25.926 0.00 0.00 0.00 2.57
496 497 8.979574 ACGCGGTTTTATTTTTGAAATTATGAA 58.020 25.926 12.47 0.00 0.00 2.57
497 498 8.522178 ACGCGGTTTTATTTTTGAAATTATGA 57.478 26.923 12.47 0.00 0.00 2.15
498 499 9.245284 GAACGCGGTTTTATTTTTGAAATTATG 57.755 29.630 12.47 0.00 0.00 1.90
499 500 9.198837 AGAACGCGGTTTTATTTTTGAAATTAT 57.801 25.926 12.47 0.00 0.00 1.28
500 501 8.576936 AGAACGCGGTTTTATTTTTGAAATTA 57.423 26.923 12.47 0.00 0.00 1.40
501 502 7.471657 AGAACGCGGTTTTATTTTTGAAATT 57.528 28.000 12.47 0.00 0.00 1.82
502 503 7.471657 AAGAACGCGGTTTTATTTTTGAAAT 57.528 28.000 12.47 0.00 0.00 2.17
503 504 6.889019 AAGAACGCGGTTTTATTTTTGAAA 57.111 29.167 12.47 0.00 0.00 2.69
504 505 6.889019 AAAGAACGCGGTTTTATTTTTGAA 57.111 29.167 12.47 0.00 0.00 2.69
505 506 6.889019 AAAAGAACGCGGTTTTATTTTTGA 57.111 29.167 12.47 0.00 0.00 2.69
506 507 7.167801 TCCTAAAAGAACGCGGTTTTATTTTTG 59.832 33.333 12.47 12.15 29.90 2.44
507 508 7.201835 TCCTAAAAGAACGCGGTTTTATTTTT 58.798 30.769 12.47 9.82 29.90 1.94
508 509 6.737118 TCCTAAAAGAACGCGGTTTTATTTT 58.263 32.000 12.47 13.99 29.90 1.82
509 510 6.316440 TCCTAAAAGAACGCGGTTTTATTT 57.684 33.333 12.47 2.60 29.90 1.40
510 511 5.945466 TCCTAAAAGAACGCGGTTTTATT 57.055 34.783 12.47 5.63 29.90 1.40
511 512 5.945466 TTCCTAAAAGAACGCGGTTTTAT 57.055 34.783 12.47 0.00 29.90 1.40
512 513 5.747951 TTTCCTAAAAGAACGCGGTTTTA 57.252 34.783 12.47 15.60 0.00 1.52
513 514 4.635833 TTTCCTAAAAGAACGCGGTTTT 57.364 36.364 12.47 15.30 0.00 2.43
514 515 4.037089 ACATTTCCTAAAAGAACGCGGTTT 59.963 37.500 12.47 7.79 0.00 3.27
515 516 3.566742 ACATTTCCTAAAAGAACGCGGTT 59.433 39.130 12.47 1.69 0.00 4.44
516 517 3.143728 ACATTTCCTAAAAGAACGCGGT 58.856 40.909 12.47 1.91 0.00 5.68
517 518 3.824414 ACATTTCCTAAAAGAACGCGG 57.176 42.857 12.47 0.00 0.00 6.46
518 519 6.539324 TCATAACATTTCCTAAAAGAACGCG 58.461 36.000 3.53 3.53 0.00 6.01
519 520 8.911247 AATCATAACATTTCCTAAAAGAACGC 57.089 30.769 0.00 0.00 0.00 4.84
544 545 8.830580 TCGCATATGAAAACATTTTTGGAAAAA 58.169 25.926 6.97 0.00 41.59 1.94
545 546 8.370493 TCGCATATGAAAACATTTTTGGAAAA 57.630 26.923 6.97 0.00 0.00 2.29
546 547 7.953158 TCGCATATGAAAACATTTTTGGAAA 57.047 28.000 6.97 0.00 0.00 3.13
547 548 7.358765 CGTTCGCATATGAAAACATTTTTGGAA 60.359 33.333 6.97 0.00 0.00 3.53
548 549 6.088749 CGTTCGCATATGAAAACATTTTTGGA 59.911 34.615 6.97 0.00 0.00 3.53
549 550 6.232788 CGTTCGCATATGAAAACATTTTTGG 58.767 36.000 6.97 0.00 0.00 3.28
550 551 5.723045 GCGTTCGCATATGAAAACATTTTTG 59.277 36.000 6.97 0.00 0.00 2.44
551 552 5.442649 CGCGTTCGCATATGAAAACATTTTT 60.443 36.000 16.98 0.00 0.00 1.94
552 553 4.030083 CGCGTTCGCATATGAAAACATTTT 59.970 37.500 16.98 0.00 0.00 1.82
553 554 3.541916 CGCGTTCGCATATGAAAACATTT 59.458 39.130 16.98 0.00 0.00 2.32
554 555 3.097910 CGCGTTCGCATATGAAAACATT 58.902 40.909 16.98 0.00 0.00 2.71
555 556 2.538737 CCGCGTTCGCATATGAAAACAT 60.539 45.455 16.98 0.00 0.00 2.71
556 557 1.201976 CCGCGTTCGCATATGAAAACA 60.202 47.619 16.98 0.00 0.00 2.83
557 558 1.452717 CCGCGTTCGCATATGAAAAC 58.547 50.000 16.98 8.55 0.00 2.43
558 559 0.247894 GCCGCGTTCGCATATGAAAA 60.248 50.000 16.98 0.00 0.00 2.29
559 560 1.087202 AGCCGCGTTCGCATATGAAA 61.087 50.000 16.98 0.00 0.00 2.69
560 561 1.087202 AAGCCGCGTTCGCATATGAA 61.087 50.000 16.98 0.00 0.00 2.57
561 562 1.087202 AAAGCCGCGTTCGCATATGA 61.087 50.000 16.98 0.00 0.00 2.15
562 563 0.925267 CAAAGCCGCGTTCGCATATG 60.925 55.000 16.98 0.00 0.00 1.78
563 564 1.087202 TCAAAGCCGCGTTCGCATAT 61.087 50.000 16.98 0.00 0.00 1.78
564 565 1.692148 CTCAAAGCCGCGTTCGCATA 61.692 55.000 16.98 0.00 0.00 3.14
565 566 3.027170 CTCAAAGCCGCGTTCGCAT 62.027 57.895 16.98 0.00 0.00 4.73
566 567 3.711842 CTCAAAGCCGCGTTCGCA 61.712 61.111 16.98 0.00 0.00 5.10
568 569 3.354499 GAGCTCAAAGCCGCGTTCG 62.354 63.158 9.40 0.00 43.77 3.95
569 570 1.569479 AAGAGCTCAAAGCCGCGTTC 61.569 55.000 17.77 0.00 43.77 3.95
570 571 0.320421 TAAGAGCTCAAAGCCGCGTT 60.320 50.000 17.77 0.10 43.77 4.84
571 572 0.108138 ATAAGAGCTCAAAGCCGCGT 60.108 50.000 17.77 0.00 43.77 6.01
572 573 1.852942 TATAAGAGCTCAAAGCCGCG 58.147 50.000 17.77 0.00 43.77 6.46
573 574 6.147821 TGAATATTATAAGAGCTCAAAGCCGC 59.852 38.462 17.77 0.00 43.77 6.53
574 575 7.513968 GTGAATATTATAAGAGCTCAAAGCCG 58.486 38.462 17.77 0.00 43.77 5.52
575 576 7.513968 CGTGAATATTATAAGAGCTCAAAGCC 58.486 38.462 17.77 0.00 43.77 4.35
576 577 7.012358 GCGTGAATATTATAAGAGCTCAAAGC 58.988 38.462 17.77 0.00 42.84 3.51
577 578 8.304202 AGCGTGAATATTATAAGAGCTCAAAG 57.696 34.615 17.77 0.00 0.00 2.77
578 579 9.193133 GTAGCGTGAATATTATAAGAGCTCAAA 57.807 33.333 17.77 3.14 34.12 2.69
579 580 7.813148 GGTAGCGTGAATATTATAAGAGCTCAA 59.187 37.037 17.77 3.56 34.12 3.02
580 581 7.176865 AGGTAGCGTGAATATTATAAGAGCTCA 59.823 37.037 17.77 0.00 34.12 4.26
581 582 7.540299 AGGTAGCGTGAATATTATAAGAGCTC 58.460 38.462 5.27 5.27 34.12 4.09
582 583 7.469537 AGGTAGCGTGAATATTATAAGAGCT 57.530 36.000 0.00 0.00 36.36 4.09
583 584 7.701501 GGTAGGTAGCGTGAATATTATAAGAGC 59.298 40.741 0.00 0.00 0.00 4.09
584 585 8.737175 TGGTAGGTAGCGTGAATATTATAAGAG 58.263 37.037 0.00 0.00 0.00 2.85
585 586 8.640063 TGGTAGGTAGCGTGAATATTATAAGA 57.360 34.615 0.00 0.00 0.00 2.10
586 587 9.517609 GATGGTAGGTAGCGTGAATATTATAAG 57.482 37.037 0.00 0.00 0.00 1.73
587 588 9.027202 TGATGGTAGGTAGCGTGAATATTATAA 57.973 33.333 0.00 0.00 0.00 0.98
588 589 8.584063 TGATGGTAGGTAGCGTGAATATTATA 57.416 34.615 0.00 0.00 0.00 0.98
589 590 7.178628 ACTGATGGTAGGTAGCGTGAATATTAT 59.821 37.037 0.00 0.00 0.00 1.28
590 591 6.492429 ACTGATGGTAGGTAGCGTGAATATTA 59.508 38.462 0.00 0.00 0.00 0.98
591 592 5.304614 ACTGATGGTAGGTAGCGTGAATATT 59.695 40.000 0.00 0.00 0.00 1.28
592 593 4.833380 ACTGATGGTAGGTAGCGTGAATAT 59.167 41.667 0.00 0.00 0.00 1.28
593 594 4.212716 ACTGATGGTAGGTAGCGTGAATA 58.787 43.478 0.00 0.00 0.00 1.75
594 595 3.031736 ACTGATGGTAGGTAGCGTGAAT 58.968 45.455 0.00 0.00 0.00 2.57
595 596 2.453521 ACTGATGGTAGGTAGCGTGAA 58.546 47.619 0.00 0.00 0.00 3.18
596 597 2.139323 ACTGATGGTAGGTAGCGTGA 57.861 50.000 0.00 0.00 0.00 4.35
597 598 2.961526 AACTGATGGTAGGTAGCGTG 57.038 50.000 0.00 0.00 0.00 5.34
598 599 3.129988 GTGTAACTGATGGTAGGTAGCGT 59.870 47.826 0.00 0.00 0.00 5.07
599 600 3.490419 GGTGTAACTGATGGTAGGTAGCG 60.490 52.174 0.00 0.00 36.74 4.26
600 601 3.449737 TGGTGTAACTGATGGTAGGTAGC 59.550 47.826 0.00 0.00 36.74 3.58
601 602 4.464951 TGTGGTGTAACTGATGGTAGGTAG 59.535 45.833 0.00 0.00 36.74 3.18
602 603 4.221262 GTGTGGTGTAACTGATGGTAGGTA 59.779 45.833 0.00 0.00 36.74 3.08
603 604 3.007614 GTGTGGTGTAACTGATGGTAGGT 59.992 47.826 0.00 0.00 36.74 3.08
604 605 3.596214 GTGTGGTGTAACTGATGGTAGG 58.404 50.000 0.00 0.00 36.74 3.18
605 606 3.596214 GGTGTGGTGTAACTGATGGTAG 58.404 50.000 0.00 0.00 36.74 3.18
606 607 2.303600 GGGTGTGGTGTAACTGATGGTA 59.696 50.000 0.00 0.00 36.74 3.25
607 608 1.073284 GGGTGTGGTGTAACTGATGGT 59.927 52.381 0.00 0.00 36.74 3.55
608 609 1.821216 GGGTGTGGTGTAACTGATGG 58.179 55.000 0.00 0.00 36.74 3.51
609 610 1.270625 ACGGGTGTGGTGTAACTGATG 60.271 52.381 0.00 0.00 36.74 3.07
610 611 1.001633 GACGGGTGTGGTGTAACTGAT 59.998 52.381 0.00 0.00 36.74 2.90
611 612 0.390124 GACGGGTGTGGTGTAACTGA 59.610 55.000 0.00 0.00 36.74 3.41
612 613 0.391597 AGACGGGTGTGGTGTAACTG 59.608 55.000 0.00 0.00 36.74 3.16
613 614 0.391597 CAGACGGGTGTGGTGTAACT 59.608 55.000 0.00 0.00 36.74 2.24
614 615 0.601841 CCAGACGGGTGTGGTGTAAC 60.602 60.000 6.82 0.00 39.02 2.50
615 616 1.749665 CCAGACGGGTGTGGTGTAA 59.250 57.895 6.82 0.00 39.02 2.41
616 617 3.462169 CCAGACGGGTGTGGTGTA 58.538 61.111 6.82 0.00 39.02 2.90
625 626 2.923035 ACCACTGGACCAGACGGG 60.923 66.667 28.56 24.55 44.81 5.28
626 627 2.343758 CACCACTGGACCAGACGG 59.656 66.667 28.56 26.17 35.18 4.79
627 628 1.300931 CACACCACTGGACCAGACG 60.301 63.158 28.56 18.05 35.18 4.18
628 629 1.598130 GCACACCACTGGACCAGAC 60.598 63.158 28.56 4.44 35.18 3.51
629 630 1.766059 AGCACACCACTGGACCAGA 60.766 57.895 28.56 0.00 35.18 3.86
630 631 1.598962 CAGCACACCACTGGACCAG 60.599 63.158 20.45 20.45 37.52 4.00
631 632 2.510411 CAGCACACCACTGGACCA 59.490 61.111 0.71 0.00 0.00 4.02
632 633 2.980233 GCAGCACACCACTGGACC 60.980 66.667 0.71 0.00 35.62 4.46
633 634 2.203195 TGCAGCACACCACTGGAC 60.203 61.111 0.71 0.00 35.62 4.02
634 635 2.203195 GTGCAGCACACCACTGGA 60.203 61.111 21.22 0.00 44.02 3.86
642 643 2.026945 TTCGAGGTGAGTGCAGCACA 62.027 55.000 27.35 4.81 44.77 4.57
643 644 0.671781 ATTCGAGGTGAGTGCAGCAC 60.672 55.000 18.55 18.55 44.77 4.40
644 645 0.390340 GATTCGAGGTGAGTGCAGCA 60.390 55.000 0.00 0.00 44.77 4.41
645 646 1.086634 GGATTCGAGGTGAGTGCAGC 61.087 60.000 0.00 0.00 42.72 5.25
646 647 0.534412 AGGATTCGAGGTGAGTGCAG 59.466 55.000 0.00 0.00 0.00 4.41
647 648 0.532573 GAGGATTCGAGGTGAGTGCA 59.467 55.000 0.00 0.00 0.00 4.57
648 649 3.354131 GAGGATTCGAGGTGAGTGC 57.646 57.895 0.00 0.00 0.00 4.40
664 665 0.173708 AAAAGTAGAGAGGCCGCGAG 59.826 55.000 8.23 0.00 0.00 5.03
665 666 1.133790 GTAAAAGTAGAGAGGCCGCGA 59.866 52.381 8.23 0.00 0.00 5.87
666 667 1.135199 TGTAAAAGTAGAGAGGCCGCG 60.135 52.381 0.00 0.00 0.00 6.46
667 668 2.667473 TGTAAAAGTAGAGAGGCCGC 57.333 50.000 0.00 0.00 0.00 6.53
668 669 4.339814 AGAGATGTAAAAGTAGAGAGGCCG 59.660 45.833 0.00 0.00 0.00 6.13
669 670 5.596772 AGAGAGATGTAAAAGTAGAGAGGCC 59.403 44.000 0.00 0.00 0.00 5.19
670 671 6.709018 AGAGAGATGTAAAAGTAGAGAGGC 57.291 41.667 0.00 0.00 0.00 4.70
671 672 9.936759 AAAAAGAGAGATGTAAAAGTAGAGAGG 57.063 33.333 0.00 0.00 0.00 3.69
695 696 2.428236 CGCGCGCATCACCAAAAA 60.428 55.556 32.61 0.00 0.00 1.94
748 749 0.037697 AATAGTTGGAGCGACGCACA 60.038 50.000 23.70 17.46 0.00 4.57
776 777 2.565834 GGGAGCTCCTATTTACCGCATA 59.434 50.000 31.36 0.00 35.95 3.14
779 780 1.049402 AGGGAGCTCCTATTTACCGC 58.951 55.000 31.36 11.99 45.98 5.68
787 788 1.365028 AGTAAACCCAGGGAGCTCCTA 59.635 52.381 31.36 11.95 46.12 2.94
801 802 7.647907 TGATTTGTTCGGTTCTAGAGTAAAC 57.352 36.000 0.00 0.00 0.00 2.01
805 806 4.684703 CGTTGATTTGTTCGGTTCTAGAGT 59.315 41.667 0.00 0.00 0.00 3.24
818 819 3.379057 ACGGGTTTCTTTCGTTGATTTGT 59.621 39.130 0.00 0.00 32.95 2.83
836 837 2.376695 TATCCTGGTCCTAAGACGGG 57.623 55.000 0.00 0.00 44.54 5.28
888 1065 1.381928 TAGGCGATCCGTCCTGTGAC 61.382 60.000 10.84 0.00 35.69 3.67
889 1066 0.681887 TTAGGCGATCCGTCCTGTGA 60.682 55.000 10.84 0.00 35.69 3.58
890 1067 0.174845 TTTAGGCGATCCGTCCTGTG 59.825 55.000 10.84 0.00 35.69 3.66
891 1068 0.899720 TTTTAGGCGATCCGTCCTGT 59.100 50.000 10.84 0.00 35.69 4.00
927 1104 3.678252 GCGAAAACTTAGGTACCCCTCTC 60.678 52.174 8.74 0.00 41.45 3.20
928 1105 2.235650 GCGAAAACTTAGGTACCCCTCT 59.764 50.000 8.74 0.00 41.45 3.69
936 1113 4.014406 CCTATTTGGGCGAAAACTTAGGT 58.986 43.478 10.35 0.00 0.00 3.08
1033 1212 1.817099 GCGGCTGATTGGACTGGAG 60.817 63.158 0.00 0.00 0.00 3.86
1074 1253 4.520846 CTTGAATCGTGGCGGCGC 62.521 66.667 26.17 26.17 0.00 6.53
1279 1459 2.856032 CGAAGCGAGCTGGTGTTG 59.144 61.111 0.00 0.00 0.00 3.33
1416 1596 0.893447 AGGTCGGAAGAAACCTACCG 59.107 55.000 0.00 0.00 46.28 4.02
1850 2557 3.405831 TCAGATGTTTCCAGCAGACAAG 58.594 45.455 0.00 0.00 0.00 3.16
1993 2707 1.737793 GCCACAAATCCTTCAGGTACG 59.262 52.381 0.00 0.00 36.34 3.67
2059 2781 4.102210 TGGGTCAAATTGAAAATTCTGGCA 59.898 37.500 0.00 0.00 0.00 4.92
2147 2869 9.341899 CCCAAGACGAAAAGTATCTTTAAAATG 57.658 33.333 0.00 0.00 30.17 2.32
2175 2898 6.367983 AGGCATCAGTTTCCACATTATGTAT 58.632 36.000 0.00 0.00 0.00 2.29
2177 2900 4.603131 AGGCATCAGTTTCCACATTATGT 58.397 39.130 0.00 0.00 0.00 2.29
2345 3072 4.697828 TCACTGTAGAGTAGTGAGCAGAAG 59.302 45.833 3.89 0.00 46.92 2.85
2354 3081 8.362464 TGGAATGTTAATCACTGTAGAGTAGT 57.638 34.615 0.00 0.00 0.00 2.73
2484 3211 5.927689 CCTAGTTGAACGTAATGTACACCAA 59.072 40.000 0.00 0.00 0.00 3.67
2526 3253 8.153550 AGGTTCAGAAGGTATTGCTGATATTAG 58.846 37.037 0.00 0.00 38.35 1.73
2550 3277 5.006386 GTCCAGATATATTTTGCCCTGAGG 58.994 45.833 0.00 0.00 0.00 3.86
2654 3381 8.458843 TGCTAAGCATATCAAAGAAAAAGGTAC 58.541 33.333 0.00 0.00 31.71 3.34
2818 3546 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2819 3547 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2820 3548 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2821 3549 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
2822 3550 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
2823 3551 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
2824 3552 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
2825 3553 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
2826 3554 5.411361 TGTTGAGTCATCTATTTTGGAACGG 59.589 40.000 0.00 0.00 0.00 4.44
2827 3555 6.480524 TGTTGAGTCATCTATTTTGGAACG 57.519 37.500 0.00 0.00 0.00 3.95
2828 3556 8.299570 ACAATGTTGAGTCATCTATTTTGGAAC 58.700 33.333 0.00 0.00 0.00 3.62
2829 3557 8.408043 ACAATGTTGAGTCATCTATTTTGGAA 57.592 30.769 0.00 0.00 0.00 3.53
2830 3558 8.946085 GTACAATGTTGAGTCATCTATTTTGGA 58.054 33.333 0.00 0.00 0.00 3.53
2831 3559 8.950210 AGTACAATGTTGAGTCATCTATTTTGG 58.050 33.333 0.00 0.00 0.00 3.28
2840 3568 9.998106 ACTAAAGTTAGTACAATGTTGAGTCAT 57.002 29.630 1.81 0.00 41.92 3.06
2862 3590 9.328845 CCCAACTTTGTACTAACTTTGTACTAA 57.671 33.333 12.73 10.75 40.44 2.24
2863 3591 8.485392 ACCCAACTTTGTACTAACTTTGTACTA 58.515 33.333 12.73 4.86 40.44 1.82
2864 3592 7.341030 ACCCAACTTTGTACTAACTTTGTACT 58.659 34.615 12.73 0.00 40.44 2.73
2865 3593 7.280652 TGACCCAACTTTGTACTAACTTTGTAC 59.719 37.037 6.58 6.58 40.27 2.90
2866 3594 7.337167 TGACCCAACTTTGTACTAACTTTGTA 58.663 34.615 0.00 0.00 0.00 2.41
2867 3595 6.181908 TGACCCAACTTTGTACTAACTTTGT 58.818 36.000 0.00 0.00 0.00 2.83
2868 3596 6.687081 TGACCCAACTTTGTACTAACTTTG 57.313 37.500 0.00 0.00 0.00 2.77
2869 3597 7.287810 AGATGACCCAACTTTGTACTAACTTT 58.712 34.615 0.00 0.00 0.00 2.66
2870 3598 6.838382 AGATGACCCAACTTTGTACTAACTT 58.162 36.000 0.00 0.00 0.00 2.66
2871 3599 6.435292 AGATGACCCAACTTTGTACTAACT 57.565 37.500 0.00 0.00 0.00 2.24
2872 3600 8.788325 AATAGATGACCCAACTTTGTACTAAC 57.212 34.615 0.00 0.00 0.00 2.34
2873 3601 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
2874 3602 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
2875 3603 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
2876 3604 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
2877 3605 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
2878 3606 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
2879 3607 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
2880 3608 7.256296 CCTTTCCAAAATAGATGACCCAACTTT 60.256 37.037 0.00 0.00 0.00 2.66
2881 3609 6.211384 CCTTTCCAAAATAGATGACCCAACTT 59.789 38.462 0.00 0.00 0.00 2.66
2882 3610 5.716703 CCTTTCCAAAATAGATGACCCAACT 59.283 40.000 0.00 0.00 0.00 3.16
2883 3611 5.714806 TCCTTTCCAAAATAGATGACCCAAC 59.285 40.000 0.00 0.00 0.00 3.77
2884 3612 5.898120 TCCTTTCCAAAATAGATGACCCAA 58.102 37.500 0.00 0.00 0.00 4.12
2885 3613 5.509498 CTCCTTTCCAAAATAGATGACCCA 58.491 41.667 0.00 0.00 0.00 4.51
2886 3614 4.889995 CCTCCTTTCCAAAATAGATGACCC 59.110 45.833 0.00 0.00 0.00 4.46
2887 3615 4.889995 CCCTCCTTTCCAAAATAGATGACC 59.110 45.833 0.00 0.00 0.00 4.02
2888 3616 5.755849 TCCCTCCTTTCCAAAATAGATGAC 58.244 41.667 0.00 0.00 0.00 3.06
2889 3617 5.492524 ACTCCCTCCTTTCCAAAATAGATGA 59.507 40.000 0.00 0.00 0.00 2.92
2890 3618 5.760131 ACTCCCTCCTTTCCAAAATAGATG 58.240 41.667 0.00 0.00 0.00 2.90
2891 3619 6.909158 TCTACTCCCTCCTTTCCAAAATAGAT 59.091 38.462 0.00 0.00 0.00 1.98
2892 3620 6.269194 TCTACTCCCTCCTTTCCAAAATAGA 58.731 40.000 0.00 0.00 0.00 1.98
2893 3621 6.561519 TCTACTCCCTCCTTTCCAAAATAG 57.438 41.667 0.00 0.00 0.00 1.73
2894 3622 6.504279 ACTTCTACTCCCTCCTTTCCAAAATA 59.496 38.462 0.00 0.00 0.00 1.40
2895 3623 5.313506 ACTTCTACTCCCTCCTTTCCAAAAT 59.686 40.000 0.00 0.00 0.00 1.82
2896 3624 4.663592 ACTTCTACTCCCTCCTTTCCAAAA 59.336 41.667 0.00 0.00 0.00 2.44
2897 3625 4.240323 ACTTCTACTCCCTCCTTTCCAAA 58.760 43.478 0.00 0.00 0.00 3.28
2898 3626 3.870559 ACTTCTACTCCCTCCTTTCCAA 58.129 45.455 0.00 0.00 0.00 3.53
2899 3627 3.562108 ACTTCTACTCCCTCCTTTCCA 57.438 47.619 0.00 0.00 0.00 3.53
2900 3628 4.912317 AAACTTCTACTCCCTCCTTTCC 57.088 45.455 0.00 0.00 0.00 3.13
2901 3629 8.537858 TGTATTAAACTTCTACTCCCTCCTTTC 58.462 37.037 0.00 0.00 0.00 2.62
2902 3630 8.445361 TGTATTAAACTTCTACTCCCTCCTTT 57.555 34.615 0.00 0.00 0.00 3.11
2903 3631 8.319881 GTTGTATTAAACTTCTACTCCCTCCTT 58.680 37.037 0.00 0.00 0.00 3.36
2904 3632 7.679025 AGTTGTATTAAACTTCTACTCCCTCCT 59.321 37.037 0.00 0.00 37.05 3.69
2905 3633 7.849160 AGTTGTATTAAACTTCTACTCCCTCC 58.151 38.462 0.00 0.00 37.05 4.30
2933 3787 6.137794 AGTCGATGGTTATGAGTTAGTCAG 57.862 41.667 0.00 0.00 39.07 3.51
3000 3855 3.651803 AAGAACTGAACTGAGGACGAG 57.348 47.619 0.00 0.00 0.00 4.18
3003 3858 8.354426 GGTAGATATAAGAACTGAACTGAGGAC 58.646 40.741 0.00 0.00 0.00 3.85
3007 3862 9.871238 GTTTGGTAGATATAAGAACTGAACTGA 57.129 33.333 0.00 0.00 0.00 3.41
3029 3884 2.286713 TGTTTCACGCTGATTCCGTTTG 60.287 45.455 0.00 0.00 36.69 2.93
3273 4485 6.479884 AGAATTAAGTTCTGCATCCAGTTCT 58.520 36.000 0.00 0.00 45.38 3.01
3378 4593 3.730963 GCCTAATTAAACAACGGCAGAGC 60.731 47.826 6.35 0.00 37.48 4.09
3384 4599 6.149807 TCCTTGTTAGCCTAATTAAACAACGG 59.850 38.462 8.45 12.21 37.02 4.44
3473 4688 7.946207 TCAGTACTTCAGCTATAGAGGAATTG 58.054 38.462 3.21 0.00 0.00 2.32
3593 5061 2.890945 ACTGGTGAGTGGCCAAATAAAC 59.109 45.455 7.24 1.41 35.32 2.01
3603 5144 3.623906 ATCATCTGAACTGGTGAGTGG 57.376 47.619 0.00 0.00 30.61 4.00
3796 5506 8.243426 TGGTCTATTGAATTGTTGCTCATAAAC 58.757 33.333 0.00 0.00 0.00 2.01
3906 5618 5.083533 ACATTGCCAGACAAAAACTGAAA 57.916 34.783 0.00 0.00 42.86 2.69
3907 5619 4.734398 ACATTGCCAGACAAAAACTGAA 57.266 36.364 0.00 0.00 42.86 3.02
4020 5732 4.558496 GCTAGCAGCACTATCTAGACCAAG 60.558 50.000 10.63 0.00 41.89 3.61
4136 5857 6.873076 TCATTTTCTGGTGCAATTTTGGTATC 59.127 34.615 0.00 0.00 0.00 2.24
4407 6152 3.199677 CAACACACGTTTACTCCTTCCA 58.800 45.455 0.00 0.00 31.13 3.53
4419 6164 1.000646 AAACCCCCACAACACACGT 60.001 52.632 0.00 0.00 0.00 4.49
4420 6165 1.435515 CAAACCCCCACAACACACG 59.564 57.895 0.00 0.00 0.00 4.49
4421 6166 1.142965 GCAAACCCCCACAACACAC 59.857 57.895 0.00 0.00 0.00 3.82
4620 6371 5.946942 AGAGATCTTACAGAATGCTGGAA 57.053 39.130 5.47 0.94 46.60 3.53
4776 6544 1.962807 CCCAACACAAAGGAGCATTGA 59.037 47.619 0.00 0.00 0.00 2.57
4821 6602 7.500227 CCAAGAAAAGGATATGAATCTACAGCA 59.500 37.037 0.00 0.00 32.29 4.41
4864 6645 8.091449 AGTTACTTCTTTCCACTGAGACATAAG 58.909 37.037 0.00 0.00 0.00 1.73
4865 6646 7.872993 CAGTTACTTCTTTCCACTGAGACATAA 59.127 37.037 0.00 0.00 37.63 1.90
4866 6647 7.232737 TCAGTTACTTCTTTCCACTGAGACATA 59.767 37.037 0.00 0.00 39.12 2.29
4867 6648 6.042093 TCAGTTACTTCTTTCCACTGAGACAT 59.958 38.462 0.00 0.00 39.12 3.06
4965 6746 4.021104 AGCATAGAAGAGCCATACGCAATA 60.021 41.667 0.00 0.00 41.38 1.90
5003 6784 6.414079 GTGCACAAGATACGAGTCATTTATG 58.586 40.000 13.17 0.00 0.00 1.90
5010 6791 1.269166 CGGTGCACAAGATACGAGTC 58.731 55.000 20.43 0.00 0.00 3.36
5013 6794 1.447140 GCCGGTGCACAAGATACGA 60.447 57.895 20.43 0.00 37.47 3.43
5014 6795 1.739929 TGCCGGTGCACAAGATACG 60.740 57.895 20.43 11.49 44.23 3.06
5024 6805 1.748493 TCCAAGAAATTATGCCGGTGC 59.252 47.619 1.90 0.00 38.26 5.01
5029 6810 9.120538 TCATACTAGTTTCCAAGAAATTATGCC 57.879 33.333 0.00 0.00 0.00 4.40
5053 6834 9.654663 TCATTTTTGCAAATGTCATAATGATCA 57.345 25.926 22.01 0.00 46.61 2.92
5098 6879 5.916661 ACGATAAGTGGATAGCCGATAAT 57.083 39.130 0.00 0.00 36.79 1.28
5100 6881 5.475909 AGAAACGATAAGTGGATAGCCGATA 59.524 40.000 0.00 0.00 36.79 2.92
5118 6899 4.497473 TCATTTGTGGCCTAAAGAAACG 57.503 40.909 3.32 0.00 0.00 3.60
5160 6941 9.938670 TGTGTGTACACTAAACAAACAATTATC 57.061 29.630 25.60 0.00 41.09 1.75
5221 7002 0.253044 ATTGGATGTGTGTCTCCCGG 59.747 55.000 0.00 0.00 0.00 5.73
5255 7036 7.225931 TGTCAAAATGCTCTTATATTACGGGAC 59.774 37.037 0.00 0.00 0.00 4.46
5271 7052 5.783111 ACATTCCCTAAAGTGTCAAAATGC 58.217 37.500 0.00 0.00 0.00 3.56
5278 7061 8.561738 TCTCAAATTACATTCCCTAAAGTGTC 57.438 34.615 0.00 0.00 0.00 3.67
5286 7069 5.699143 CCCAGATCTCAAATTACATTCCCT 58.301 41.667 0.00 0.00 0.00 4.20
5287 7070 4.279420 GCCCAGATCTCAAATTACATTCCC 59.721 45.833 0.00 0.00 0.00 3.97
5288 7071 4.889409 TGCCCAGATCTCAAATTACATTCC 59.111 41.667 0.00 0.00 0.00 3.01
5307 7090 2.287608 CCTTGTTTCTTCGACTTTGCCC 60.288 50.000 0.00 0.00 0.00 5.36
5308 7091 2.357952 ACCTTGTTTCTTCGACTTTGCC 59.642 45.455 0.00 0.00 0.00 4.52
5309 7092 3.692791 ACCTTGTTTCTTCGACTTTGC 57.307 42.857 0.00 0.00 0.00 3.68
5315 7098 4.127171 CCTCTTGAACCTTGTTTCTTCGA 58.873 43.478 0.00 0.00 0.00 3.71
5316 7099 3.304057 GCCTCTTGAACCTTGTTTCTTCG 60.304 47.826 0.00 0.00 0.00 3.79
5317 7100 3.632145 TGCCTCTTGAACCTTGTTTCTTC 59.368 43.478 0.00 0.00 0.00 2.87
5328 7111 3.145286 AGAGCTTTTCTGCCTCTTGAAC 58.855 45.455 0.00 0.00 33.93 3.18
5334 7117 2.027285 AGGAGAAGAGCTTTTCTGCCTC 60.027 50.000 27.75 13.30 43.95 4.70
5448 7233 2.662156 CCTCTAACAAGAACGAGAACGC 59.338 50.000 0.00 0.00 43.96 4.84
5469 7254 3.365265 CCCCAACCAAGACGCTGC 61.365 66.667 0.00 0.00 0.00 5.25
5516 7301 7.256835 GGGATAGAACATGGGAGACATTATTCT 60.257 40.741 0.00 0.00 41.71 2.40
5630 7415 3.716872 ACCGGATTCAAATAGATCCACCT 59.283 43.478 9.46 0.00 32.91 4.00
5645 7430 2.301009 ACACCTAAACGAAGACCGGATT 59.699 45.455 9.46 1.40 43.93 3.01
5720 7525 0.037232 GGACCAGCACACCAGAGTAC 60.037 60.000 0.00 0.00 0.00 2.73
5721 7526 0.178932 AGGACCAGCACACCAGAGTA 60.179 55.000 0.00 0.00 0.00 2.59
5722 7527 1.056700 AAGGACCAGCACACCAGAGT 61.057 55.000 0.00 0.00 0.00 3.24
5755 7569 4.220163 ACCTTGTTGTAGTAGACAGTAGGC 59.780 45.833 0.00 0.00 39.88 3.93
5758 7572 5.987347 GCAAACCTTGTTGTAGTAGACAGTA 59.013 40.000 0.00 0.00 39.88 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.