Multiple sequence alignment - TraesCS6D01G205400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G205400 chr6D 100.000 5294 0 0 1 5294 291241288 291246581 0.000000e+00 9777
1 TraesCS6D01G205400 chr6A 92.264 3529 172 34 937 4430 432249314 432245852 0.000000e+00 4911
2 TraesCS6D01G205400 chr6A 96.388 886 18 2 4420 5294 432245607 432244725 0.000000e+00 1447
3 TraesCS6D01G205400 chr6A 91.954 87 6 1 254 340 53084391 53084476 2.590000e-23 121
4 TraesCS6D01G205400 chr6B 95.168 1573 49 3 2963 4517 452186599 452188162 0.000000e+00 2459
5 TraesCS6D01G205400 chr6B 90.054 1468 82 22 930 2378 452184579 452186001 0.000000e+00 1844
6 TraesCS6D01G205400 chr6B 95.536 784 17 4 4519 5294 452188323 452189096 0.000000e+00 1238
7 TraesCS6D01G205400 chr6B 95.963 545 18 4 2377 2920 452186059 452186600 0.000000e+00 881
8 TraesCS6D01G205400 chr7D 92.479 359 26 1 254 612 52029558 52029201 3.660000e-141 512
9 TraesCS6D01G205400 chr7D 93.976 249 13 2 642 890 52028799 52028553 5.010000e-100 375
10 TraesCS6D01G205400 chr7A 87.921 356 39 4 256 610 47685124 47685476 2.950000e-112 416
11 TraesCS6D01G205400 chr7A 89.453 256 22 2 639 890 47685875 47686129 8.560000e-83 318
12 TraesCS6D01G205400 chr4B 87.430 358 44 1 255 612 405633400 405633756 1.370000e-110 411
13 TraesCS6D01G205400 chr4B 83.796 216 30 3 642 857 657602760 657602550 3.230000e-47 200
14 TraesCS6D01G205400 chr1B 87.430 358 44 1 255 612 63071365 63071721 1.370000e-110 411
15 TraesCS6D01G205400 chr1B 87.360 356 44 1 255 610 16126244 16125890 1.780000e-109 407
16 TraesCS6D01G205400 chr1B 87.698 252 28 3 639 890 63072121 63072369 1.870000e-74 291
17 TraesCS6D01G205400 chr5B 86.313 358 48 1 255 612 605230988 605230632 6.430000e-104 388
18 TraesCS6D01G205400 chr5B 92.513 187 13 1 642 828 605230228 605230043 3.140000e-67 267
19 TraesCS6D01G205400 chr5A 91.700 253 11 4 642 890 632359509 632359263 5.080000e-90 342
20 TraesCS6D01G205400 chr7B 91.045 134 11 1 639 772 712643092 712643224 4.210000e-41 180


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G205400 chr6D 291241288 291246581 5293 False 9777.0 9777 100.00000 1 5294 1 chr6D.!!$F1 5293
1 TraesCS6D01G205400 chr6A 432244725 432249314 4589 True 3179.0 4911 94.32600 937 5294 2 chr6A.!!$R1 4357
2 TraesCS6D01G205400 chr6B 452184579 452189096 4517 False 1605.5 2459 94.18025 930 5294 4 chr6B.!!$F1 4364
3 TraesCS6D01G205400 chr7D 52028553 52029558 1005 True 443.5 512 93.22750 254 890 2 chr7D.!!$R1 636
4 TraesCS6D01G205400 chr7A 47685124 47686129 1005 False 367.0 416 88.68700 256 890 2 chr7A.!!$F1 634
5 TraesCS6D01G205400 chr1B 63071365 63072369 1004 False 351.0 411 87.56400 255 890 2 chr1B.!!$F1 635
6 TraesCS6D01G205400 chr5B 605230043 605230988 945 True 327.5 388 89.41300 255 828 2 chr5B.!!$R1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
89 90 0.105039 GGGAGTTCGATACCCTGCAG 59.895 60.0 6.78 6.78 40.39 4.41 F
1591 1984 0.033601 CAAATCCCCAATCCGACCCA 60.034 55.0 0.00 0.00 0.00 4.51 F
1592 1985 0.707616 AAATCCCCAATCCGACCCAA 59.292 50.0 0.00 0.00 0.00 4.12 F
1715 2108 0.880278 GCGTCCTTGCTGTCTCAACA 60.880 55.0 0.00 0.00 0.00 3.33 F
1991 2391 0.979665 CATAGCCGGATGAGATGGGT 59.020 55.0 5.05 0.00 37.28 4.51 F
2811 3280 1.087501 GACGAAGATTTGGGAGCACC 58.912 55.0 0.00 0.00 40.81 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1962 2362 0.031917 TCCGGCTATGAGGGGTTACA 60.032 55.000 0.00 0.00 0.00 2.41 R
3543 4013 2.315925 ATGGATGAAGCTGGTACACG 57.684 50.000 0.00 0.00 0.00 4.49 R
3610 4080 2.025321 GGAAAAGCCATCCAGGGACTAA 60.025 50.000 0.00 0.00 36.92 2.24 R
3691 4161 3.125829 GCCAATATGATGTGATACCGCAG 59.874 47.826 0.00 0.00 36.09 5.18 R
3843 4313 0.389817 GCGCACACCTCATACACTCA 60.390 55.000 0.30 0.00 0.00 3.41 R
4494 5248 1.300931 CATATCGGGGCCTGTGTCG 60.301 63.158 13.14 2.01 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.690194 AAGGATTTTAGTCATCATGTCAGC 57.310 37.500 0.00 0.00 0.00 4.26
28 29 5.128919 AGGATTTTAGTCATCATGTCAGCC 58.871 41.667 0.00 0.00 0.00 4.85
29 30 4.883585 GGATTTTAGTCATCATGTCAGCCA 59.116 41.667 0.00 0.00 0.00 4.75
30 31 5.357878 GGATTTTAGTCATCATGTCAGCCAA 59.642 40.000 0.00 0.00 0.00 4.52
31 32 5.885230 TTTTAGTCATCATGTCAGCCAAG 57.115 39.130 0.00 0.00 0.00 3.61
32 33 2.414994 AGTCATCATGTCAGCCAAGG 57.585 50.000 0.00 0.00 0.00 3.61
33 34 0.737219 GTCATCATGTCAGCCAAGGC 59.263 55.000 2.02 2.02 42.33 4.35
44 45 3.428282 CCAAGGCGCGGTGGTTAC 61.428 66.667 17.50 0.00 0.00 2.50
45 46 3.428282 CAAGGCGCGGTGGTTACC 61.428 66.667 8.83 0.00 43.89 2.85
58 59 3.572584 GTGGTTACCGCCTATTATCTCG 58.427 50.000 3.10 0.00 0.00 4.04
59 60 3.254166 GTGGTTACCGCCTATTATCTCGA 59.746 47.826 3.10 0.00 0.00 4.04
60 61 3.890756 TGGTTACCGCCTATTATCTCGAA 59.109 43.478 0.00 0.00 0.00 3.71
61 62 4.022589 TGGTTACCGCCTATTATCTCGAAG 60.023 45.833 0.00 0.00 0.00 3.79
62 63 4.022503 GGTTACCGCCTATTATCTCGAAGT 60.023 45.833 0.00 0.00 0.00 3.01
63 64 3.644884 ACCGCCTATTATCTCGAAGTG 57.355 47.619 0.00 0.00 0.00 3.16
64 65 2.296471 ACCGCCTATTATCTCGAAGTGG 59.704 50.000 0.00 0.00 0.00 4.00
65 66 2.557056 CCGCCTATTATCTCGAAGTGGA 59.443 50.000 0.00 0.00 0.00 4.02
66 67 3.366476 CCGCCTATTATCTCGAAGTGGAG 60.366 52.174 0.00 0.00 35.32 3.86
67 68 3.366476 CGCCTATTATCTCGAAGTGGAGG 60.366 52.174 0.00 0.00 34.74 4.30
68 69 3.574826 GCCTATTATCTCGAAGTGGAGGT 59.425 47.826 0.00 0.00 34.74 3.85
69 70 4.321378 GCCTATTATCTCGAAGTGGAGGTC 60.321 50.000 0.00 0.00 34.74 3.85
70 71 3.992260 ATTATCTCGAAGTGGAGGTCG 57.008 47.619 0.00 0.00 38.62 4.79
71 72 1.676746 TATCTCGAAGTGGAGGTCGG 58.323 55.000 0.00 0.00 37.84 4.79
72 73 1.038130 ATCTCGAAGTGGAGGTCGGG 61.038 60.000 0.00 0.00 39.14 5.14
73 74 1.677966 CTCGAAGTGGAGGTCGGGA 60.678 63.158 0.00 0.00 40.24 5.14
74 75 1.658686 CTCGAAGTGGAGGTCGGGAG 61.659 65.000 0.00 0.00 40.24 4.30
75 76 1.977544 CGAAGTGGAGGTCGGGAGT 60.978 63.158 0.00 0.00 33.62 3.85
76 77 1.533469 CGAAGTGGAGGTCGGGAGTT 61.533 60.000 0.00 0.00 33.62 3.01
77 78 0.246910 GAAGTGGAGGTCGGGAGTTC 59.753 60.000 0.00 0.00 0.00 3.01
78 79 1.533469 AAGTGGAGGTCGGGAGTTCG 61.533 60.000 0.00 0.00 0.00 3.95
79 80 1.975407 GTGGAGGTCGGGAGTTCGA 60.975 63.158 0.00 0.00 36.76 3.71
80 81 1.000019 TGGAGGTCGGGAGTTCGAT 60.000 57.895 0.00 0.00 41.40 3.59
81 82 0.256752 TGGAGGTCGGGAGTTCGATA 59.743 55.000 0.00 0.00 41.40 2.92
82 83 0.667453 GGAGGTCGGGAGTTCGATAC 59.333 60.000 0.00 0.00 41.40 2.24
83 84 0.667453 GAGGTCGGGAGTTCGATACC 59.333 60.000 0.00 0.00 41.40 2.73
84 85 0.754587 AGGTCGGGAGTTCGATACCC 60.755 60.000 10.74 10.74 41.40 3.69
85 86 0.754587 GGTCGGGAGTTCGATACCCT 60.755 60.000 16.30 0.00 41.40 4.34
86 87 0.384669 GTCGGGAGTTCGATACCCTG 59.615 60.000 16.30 9.34 41.40 4.45
87 88 1.067582 CGGGAGTTCGATACCCTGC 59.932 63.158 16.30 3.56 41.28 4.85
88 89 1.672854 CGGGAGTTCGATACCCTGCA 61.673 60.000 16.30 0.00 41.28 4.41
89 90 0.105039 GGGAGTTCGATACCCTGCAG 59.895 60.000 6.78 6.78 40.39 4.41
90 91 0.105039 GGAGTTCGATACCCTGCAGG 59.895 60.000 26.87 26.87 43.78 4.85
100 101 2.753043 CCTGCAGGGCGCTCATTT 60.753 61.111 26.14 0.00 43.06 2.32
101 102 2.345760 CCTGCAGGGCGCTCATTTT 61.346 57.895 26.14 0.00 43.06 1.82
102 103 1.588082 CTGCAGGGCGCTCATTTTT 59.412 52.632 11.40 0.00 43.06 1.94
124 125 7.533289 TTTTGGTTACATAAAAAGGGAGAGG 57.467 36.000 0.00 0.00 0.00 3.69
125 126 6.457159 TTGGTTACATAAAAAGGGAGAGGA 57.543 37.500 0.00 0.00 0.00 3.71
126 127 6.457159 TGGTTACATAAAAAGGGAGAGGAA 57.543 37.500 0.00 0.00 0.00 3.36
127 128 6.854578 TGGTTACATAAAAAGGGAGAGGAAA 58.145 36.000 0.00 0.00 0.00 3.13
128 129 7.299134 TGGTTACATAAAAAGGGAGAGGAAAA 58.701 34.615 0.00 0.00 0.00 2.29
129 130 7.785506 TGGTTACATAAAAAGGGAGAGGAAAAA 59.214 33.333 0.00 0.00 0.00 1.94
144 145 2.267045 AAAAAGCGTGAGATGGGCC 58.733 52.632 0.00 0.00 0.00 5.80
145 146 1.586154 AAAAAGCGTGAGATGGGCCG 61.586 55.000 0.00 0.00 0.00 6.13
146 147 3.976701 AAAGCGTGAGATGGGCCGG 62.977 63.158 0.00 0.00 0.00 6.13
177 178 4.389576 GCTGCAGACGCCCGTTTG 62.390 66.667 20.43 6.95 37.32 2.93
181 182 2.664851 CAGACGCCCGTTTGCAGA 60.665 61.111 0.00 0.00 0.00 4.26
182 183 2.110213 AGACGCCCGTTTGCAGAA 59.890 55.556 0.00 0.00 0.00 3.02
183 184 1.525077 AGACGCCCGTTTGCAGAAA 60.525 52.632 0.00 0.00 0.00 2.52
184 185 0.889186 AGACGCCCGTTTGCAGAAAT 60.889 50.000 0.00 0.00 0.00 2.17
185 186 0.800012 GACGCCCGTTTGCAGAAATA 59.200 50.000 0.00 0.00 0.00 1.40
186 187 0.519961 ACGCCCGTTTGCAGAAATAC 59.480 50.000 0.00 0.00 0.00 1.89
187 188 0.519519 CGCCCGTTTGCAGAAATACA 59.480 50.000 0.00 0.00 0.00 2.29
188 189 1.727857 CGCCCGTTTGCAGAAATACAC 60.728 52.381 0.00 0.00 0.00 2.90
189 190 1.268352 GCCCGTTTGCAGAAATACACA 59.732 47.619 0.00 0.00 0.00 3.72
190 191 2.094752 GCCCGTTTGCAGAAATACACAT 60.095 45.455 0.00 0.00 0.00 3.21
191 192 3.613910 GCCCGTTTGCAGAAATACACATT 60.614 43.478 0.00 0.00 0.00 2.71
192 193 4.380023 GCCCGTTTGCAGAAATACACATTA 60.380 41.667 0.00 0.00 0.00 1.90
193 194 5.704888 CCCGTTTGCAGAAATACACATTAA 58.295 37.500 0.00 0.00 0.00 1.40
194 195 5.571357 CCCGTTTGCAGAAATACACATTAAC 59.429 40.000 0.00 0.00 0.00 2.01
195 196 6.146216 CCGTTTGCAGAAATACACATTAACA 58.854 36.000 0.00 0.00 0.00 2.41
196 197 6.305399 CCGTTTGCAGAAATACACATTAACAG 59.695 38.462 0.00 0.00 0.00 3.16
197 198 6.305399 CGTTTGCAGAAATACACATTAACAGG 59.695 38.462 0.00 0.00 0.00 4.00
198 199 5.309323 TGCAGAAATACACATTAACAGGC 57.691 39.130 0.00 0.00 0.00 4.85
199 200 4.764308 TGCAGAAATACACATTAACAGGCA 59.236 37.500 0.00 0.00 0.00 4.75
200 201 5.095490 GCAGAAATACACATTAACAGGCAC 58.905 41.667 0.00 0.00 0.00 5.01
201 202 5.106157 GCAGAAATACACATTAACAGGCACT 60.106 40.000 0.00 0.00 43.88 4.40
202 203 6.570378 GCAGAAATACACATTAACAGGCACTT 60.570 38.462 0.00 0.00 34.60 3.16
203 204 7.361713 GCAGAAATACACATTAACAGGCACTTA 60.362 37.037 0.00 0.00 34.60 2.24
204 205 7.962918 CAGAAATACACATTAACAGGCACTTAC 59.037 37.037 0.00 0.00 34.60 2.34
205 206 7.663905 AGAAATACACATTAACAGGCACTTACA 59.336 33.333 0.00 0.00 34.60 2.41
206 207 6.985188 ATACACATTAACAGGCACTTACAG 57.015 37.500 0.00 0.00 34.60 2.74
207 208 3.502211 ACACATTAACAGGCACTTACAGC 59.498 43.478 0.00 0.00 34.60 4.40
208 209 2.742053 ACATTAACAGGCACTTACAGCG 59.258 45.455 0.00 0.00 34.60 5.18
209 210 2.536761 TTAACAGGCACTTACAGCGT 57.463 45.000 0.00 0.00 34.60 5.07
210 211 2.074547 TAACAGGCACTTACAGCGTC 57.925 50.000 0.00 0.00 34.60 5.19
211 212 0.105964 AACAGGCACTTACAGCGTCA 59.894 50.000 0.00 0.00 34.60 4.35
212 213 0.105964 ACAGGCACTTACAGCGTCAA 59.894 50.000 0.00 0.00 34.60 3.18
213 214 1.225855 CAGGCACTTACAGCGTCAAA 58.774 50.000 0.00 0.00 34.60 2.69
214 215 1.601903 CAGGCACTTACAGCGTCAAAA 59.398 47.619 0.00 0.00 34.60 2.44
215 216 2.226437 CAGGCACTTACAGCGTCAAAAT 59.774 45.455 0.00 0.00 34.60 1.82
216 217 3.435327 CAGGCACTTACAGCGTCAAAATA 59.565 43.478 0.00 0.00 34.60 1.40
217 218 3.684788 AGGCACTTACAGCGTCAAAATAG 59.315 43.478 0.00 0.00 27.25 1.73
218 219 3.181510 GGCACTTACAGCGTCAAAATAGG 60.182 47.826 0.00 0.00 0.00 2.57
219 220 3.682858 GCACTTACAGCGTCAAAATAGGA 59.317 43.478 0.00 0.00 0.00 2.94
220 221 4.332819 GCACTTACAGCGTCAAAATAGGAT 59.667 41.667 0.00 0.00 0.00 3.24
221 222 5.502544 GCACTTACAGCGTCAAAATAGGATC 60.503 44.000 0.00 0.00 0.00 3.36
222 223 5.006746 CACTTACAGCGTCAAAATAGGATCC 59.993 44.000 2.48 2.48 0.00 3.36
223 224 3.914426 ACAGCGTCAAAATAGGATCCT 57.086 42.857 20.48 20.48 0.00 3.24
224 225 4.222124 ACAGCGTCAAAATAGGATCCTT 57.778 40.909 22.03 5.03 0.00 3.36
225 226 4.192317 ACAGCGTCAAAATAGGATCCTTC 58.808 43.478 22.03 1.72 0.00 3.46
226 227 4.080863 ACAGCGTCAAAATAGGATCCTTCT 60.081 41.667 22.03 5.01 0.00 2.85
227 228 4.509600 CAGCGTCAAAATAGGATCCTTCTC 59.490 45.833 22.03 3.44 0.00 2.87
228 229 4.407296 AGCGTCAAAATAGGATCCTTCTCT 59.593 41.667 22.03 0.00 0.00 3.10
229 230 4.509600 GCGTCAAAATAGGATCCTTCTCTG 59.490 45.833 22.03 12.81 0.00 3.35
230 231 5.682471 GCGTCAAAATAGGATCCTTCTCTGA 60.682 44.000 22.03 14.90 0.00 3.27
231 232 6.341316 CGTCAAAATAGGATCCTTCTCTGAA 58.659 40.000 22.03 0.00 0.00 3.02
232 233 6.818644 CGTCAAAATAGGATCCTTCTCTGAAA 59.181 38.462 22.03 0.00 0.00 2.69
233 234 7.010923 CGTCAAAATAGGATCCTTCTCTGAAAG 59.989 40.741 22.03 11.40 0.00 2.62
234 235 8.043710 GTCAAAATAGGATCCTTCTCTGAAAGA 58.956 37.037 22.03 4.35 43.69 2.52
246 247 3.895232 TCTGAAAGAGCGCTCCTTAAT 57.105 42.857 32.94 12.34 38.67 1.40
247 248 4.207891 TCTGAAAGAGCGCTCCTTAATT 57.792 40.909 32.94 17.90 38.67 1.40
248 249 5.339008 TCTGAAAGAGCGCTCCTTAATTA 57.661 39.130 32.94 11.48 38.67 1.40
249 250 5.352284 TCTGAAAGAGCGCTCCTTAATTAG 58.648 41.667 32.94 20.33 38.67 1.73
250 251 3.871594 TGAAAGAGCGCTCCTTAATTAGC 59.128 43.478 32.94 13.97 35.33 3.09
251 252 3.828875 AAGAGCGCTCCTTAATTAGCT 57.171 42.857 32.94 8.29 36.56 3.32
252 253 3.104843 AGAGCGCTCCTTAATTAGCTG 57.895 47.619 32.94 3.46 36.56 4.24
286 287 4.514401 AGAAACAACTTTGGTCGACTCTT 58.486 39.130 16.46 0.00 0.00 2.85
311 312 7.589958 TGGAAGCTCAAAATACTACCAAAAA 57.410 32.000 0.00 0.00 0.00 1.94
333 334 1.110518 GCGGGTTTTTGGGTGGAGAA 61.111 55.000 0.00 0.00 0.00 2.87
401 402 0.885879 TCAGGACAATCGCTACGTGT 59.114 50.000 0.00 0.00 0.00 4.49
438 439 3.673902 TCGGAAGAAGATTTGATGCACA 58.326 40.909 0.00 0.00 37.03 4.57
506 507 3.866449 GCGAGGAACTGGATCTCAAACTT 60.866 47.826 0.00 0.00 41.55 2.66
533 534 1.077501 GCATCCTAGCACTTGGGCA 60.078 57.895 0.00 0.00 35.83 5.36
535 536 1.386533 CATCCTAGCACTTGGGCAAG 58.613 55.000 0.00 0.00 43.79 4.01
559 560 7.271511 AGAGACATTGTCTTGGATGAGATAAC 58.728 38.462 19.88 3.40 43.53 1.89
562 563 7.125507 AGACATTGTCTTGGATGAGATAACTCT 59.874 37.037 13.61 0.00 40.28 3.24
572 573 6.042897 TGGATGAGATAACTCTTGATGCTGAT 59.957 38.462 1.39 0.00 42.99 2.90
578 579 4.833478 AACTCTTGATGCTGATAGGTGT 57.167 40.909 0.00 0.00 0.00 4.16
741 1122 7.932134 TGTTATGAGGGATGCTAATATTCCAT 58.068 34.615 0.00 0.00 0.00 3.41
747 1128 7.037080 TGAGGGATGCTAATATTCCATCAGATT 60.037 37.037 21.26 10.04 43.28 2.40
749 1130 7.614583 AGGGATGCTAATATTCCATCAGATTTG 59.385 37.037 21.26 0.00 37.64 2.32
757 1138 7.741027 ATATTCCATCAGATTTGTGTGCTAG 57.259 36.000 0.00 0.00 0.00 3.42
788 1169 4.635324 ACTAGTCTTAGTAGTTCGGAGTGC 59.365 45.833 0.00 0.00 38.35 4.40
823 1204 3.714798 AGTCCAGGTTTCCTTGTGAGTAA 59.285 43.478 0.00 0.00 0.00 2.24
908 1293 6.690194 AAAAATAGCTGCTCTCGAATTCAT 57.310 33.333 4.91 0.00 0.00 2.57
909 1294 5.670149 AAATAGCTGCTCTCGAATTCATG 57.330 39.130 4.91 0.00 0.00 3.07
910 1295 1.297664 AGCTGCTCTCGAATTCATGC 58.702 50.000 6.22 4.38 0.00 4.06
911 1296 0.307146 GCTGCTCTCGAATTCATGCC 59.693 55.000 6.22 0.00 0.00 4.40
912 1297 1.660167 CTGCTCTCGAATTCATGCCA 58.340 50.000 6.22 0.00 0.00 4.92
913 1298 2.011947 CTGCTCTCGAATTCATGCCAA 58.988 47.619 6.22 0.00 0.00 4.52
914 1299 2.617308 CTGCTCTCGAATTCATGCCAAT 59.383 45.455 6.22 0.00 0.00 3.16
915 1300 3.018856 TGCTCTCGAATTCATGCCAATT 58.981 40.909 6.22 0.00 0.00 2.32
916 1301 3.065786 TGCTCTCGAATTCATGCCAATTC 59.934 43.478 6.22 8.97 38.79 2.17
917 1302 3.314635 GCTCTCGAATTCATGCCAATTCT 59.685 43.478 14.52 0.00 39.64 2.40
918 1303 4.201990 GCTCTCGAATTCATGCCAATTCTT 60.202 41.667 14.52 0.00 39.64 2.52
919 1304 5.008019 GCTCTCGAATTCATGCCAATTCTTA 59.992 40.000 14.52 5.52 39.64 2.10
920 1305 6.458751 GCTCTCGAATTCATGCCAATTCTTAA 60.459 38.462 14.52 3.78 39.64 1.85
921 1306 7.572523 TCTCGAATTCATGCCAATTCTTAAT 57.427 32.000 14.52 0.00 39.64 1.40
922 1307 7.999679 TCTCGAATTCATGCCAATTCTTAATT 58.000 30.769 14.52 1.86 39.64 1.40
923 1308 8.131100 TCTCGAATTCATGCCAATTCTTAATTC 58.869 33.333 14.52 8.61 39.64 2.17
924 1309 7.999679 TCGAATTCATGCCAATTCTTAATTCT 58.000 30.769 14.52 0.00 39.64 2.40
925 1310 9.119418 TCGAATTCATGCCAATTCTTAATTCTA 57.881 29.630 14.52 1.50 39.64 2.10
926 1311 9.390795 CGAATTCATGCCAATTCTTAATTCTAG 57.609 33.333 14.52 0.00 39.64 2.43
927 1312 9.688592 GAATTCATGCCAATTCTTAATTCTAGG 57.311 33.333 10.97 0.00 39.00 3.02
928 1313 9.425248 AATTCATGCCAATTCTTAATTCTAGGA 57.575 29.630 0.00 0.00 0.00 2.94
1012 1397 0.178990 AATTGCCTAATCCCCTCCGC 60.179 55.000 0.00 0.00 0.00 5.54
1013 1398 1.352622 ATTGCCTAATCCCCTCCGCA 61.353 55.000 0.00 0.00 0.00 5.69
1015 1400 2.421739 CCTAATCCCCTCCGCACG 59.578 66.667 0.00 0.00 0.00 5.34
1100 1487 1.809619 CGCCAGAAATCGAGCGGAA 60.810 57.895 6.58 0.00 44.64 4.30
1152 1545 1.740332 GCCTCTCTCCGGTAAGCTCC 61.740 65.000 0.00 0.00 0.00 4.70
1165 1558 1.506025 AAGCTCCCCATCTCCTCTTC 58.494 55.000 0.00 0.00 0.00 2.87
1166 1559 0.399806 AGCTCCCCATCTCCTCTTCC 60.400 60.000 0.00 0.00 0.00 3.46
1167 1560 0.399806 GCTCCCCATCTCCTCTTCCT 60.400 60.000 0.00 0.00 0.00 3.36
1168 1561 1.715785 CTCCCCATCTCCTCTTCCTC 58.284 60.000 0.00 0.00 0.00 3.71
1169 1562 1.220236 CTCCCCATCTCCTCTTCCTCT 59.780 57.143 0.00 0.00 0.00 3.69
1170 1563 1.653918 TCCCCATCTCCTCTTCCTCTT 59.346 52.381 0.00 0.00 0.00 2.85
1171 1564 2.046292 CCCCATCTCCTCTTCCTCTTC 58.954 57.143 0.00 0.00 0.00 2.87
1204 1597 1.339610 CTCTGACGATGGATCCCTGAC 59.660 57.143 9.90 0.00 0.00 3.51
1260 1653 2.387757 GCTCTCTCCATCTCTCACCTT 58.612 52.381 0.00 0.00 0.00 3.50
1265 1658 1.066908 CTCCATCTCTCACCTTCTCGC 59.933 57.143 0.00 0.00 0.00 5.03
1339 1732 1.710013 TCGAATCGAACCACAGCTTC 58.290 50.000 1.57 0.00 31.06 3.86
1416 1809 2.182030 CGCTCCTCCGGTGAACTC 59.818 66.667 4.76 0.00 0.00 3.01
1417 1810 2.636412 CGCTCCTCCGGTGAACTCA 61.636 63.158 4.76 0.00 0.00 3.41
1467 1860 1.073025 TCATCACCTGCGTGGCTTT 59.927 52.632 0.00 0.00 40.65 3.51
1511 1904 3.033368 GGAACTTATCCTCTCCATCGC 57.967 52.381 0.00 0.00 45.56 4.58
1559 1952 0.674534 ACCTCTTCTTGTCGCGAGTT 59.325 50.000 10.24 0.00 0.00 3.01
1584 1977 1.133167 CCTACCCCCAAATCCCCAATC 60.133 57.143 0.00 0.00 0.00 2.67
1585 1978 0.938192 TACCCCCAAATCCCCAATCC 59.062 55.000 0.00 0.00 0.00 3.01
1586 1979 1.457455 CCCCCAAATCCCCAATCCG 60.457 63.158 0.00 0.00 0.00 4.18
1587 1980 1.618030 CCCCAAATCCCCAATCCGA 59.382 57.895 0.00 0.00 0.00 4.55
1588 1981 0.755327 CCCCAAATCCCCAATCCGAC 60.755 60.000 0.00 0.00 0.00 4.79
1589 1982 0.755327 CCCAAATCCCCAATCCGACC 60.755 60.000 0.00 0.00 0.00 4.79
1590 1983 0.755327 CCAAATCCCCAATCCGACCC 60.755 60.000 0.00 0.00 0.00 4.46
1591 1984 0.033601 CAAATCCCCAATCCGACCCA 60.034 55.000 0.00 0.00 0.00 4.51
1592 1985 0.707616 AAATCCCCAATCCGACCCAA 59.292 50.000 0.00 0.00 0.00 4.12
1593 1986 0.933700 AATCCCCAATCCGACCCAAT 59.066 50.000 0.00 0.00 0.00 3.16
1715 2108 0.880278 GCGTCCTTGCTGTCTCAACA 60.880 55.000 0.00 0.00 0.00 3.33
1719 2112 1.230635 CCTTGCTGTCTCAACACCGG 61.231 60.000 0.00 0.00 0.00 5.28
1721 2114 2.031163 GCTGTCTCAACACCGGCT 59.969 61.111 0.00 0.00 0.00 5.52
1780 2173 7.759433 CACTTTGTCACCAGTGAGTTAAAAATT 59.241 33.333 0.00 0.00 42.74 1.82
1954 2353 4.655649 ACATATTCACTGCTATCCTCCACA 59.344 41.667 0.00 0.00 0.00 4.17
1962 2362 4.042187 ACTGCTATCCTCCACAGTTTTCTT 59.958 41.667 0.00 0.00 40.35 2.52
1991 2391 0.979665 CATAGCCGGATGAGATGGGT 59.020 55.000 5.05 0.00 37.28 4.51
1998 2400 1.670811 CGGATGAGATGGGTTTTTCCG 59.329 52.381 0.00 0.00 38.71 4.30
2031 2433 1.341531 GCTCTTGGCTAGGCTAATCGA 59.658 52.381 18.18 3.15 38.06 3.59
2032 2434 2.224066 GCTCTTGGCTAGGCTAATCGAA 60.224 50.000 18.18 1.05 38.06 3.71
2035 2437 4.839121 TCTTGGCTAGGCTAATCGAAAAA 58.161 39.130 18.18 0.00 0.00 1.94
2173 2576 6.120905 GCTATGGATATCCTGCAAGATCATT 58.879 40.000 22.35 0.00 34.07 2.57
2409 2871 7.230108 CAGCTGAATAAATGTCTGGATATGGTT 59.770 37.037 8.42 0.00 0.00 3.67
2483 2945 2.869192 GCTGAGATTTCCTAGGCTTTCG 59.131 50.000 2.96 0.00 0.00 3.46
2530 2994 5.220381 GCACAATATCATTGGAGAGCATTG 58.780 41.667 4.09 0.00 33.48 2.82
2531 2995 5.220381 CACAATATCATTGGAGAGCATTGC 58.780 41.667 0.00 0.00 31.84 3.56
2667 3131 6.480320 GCTGGTAGAATAAGGACTGTAATGTG 59.520 42.308 0.00 0.00 0.00 3.21
2811 3280 1.087501 GACGAAGATTTGGGAGCACC 58.912 55.000 0.00 0.00 40.81 5.01
2830 3299 4.143347 GCACCAATCTGTTAATGCAAAACG 60.143 41.667 9.85 6.04 33.27 3.60
2836 3305 7.148983 CCAATCTGTTAATGCAAAACGTTACTG 60.149 37.037 0.00 3.37 29.27 2.74
2884 3353 2.949644 GTGGTAGGATTGGCATTACACC 59.050 50.000 0.00 0.00 0.00 4.16
2888 3357 3.577805 AGGATTGGCATTACACCCTAC 57.422 47.619 0.00 0.00 0.00 3.18
2966 3435 7.861630 AGTACAGTGCAGTTAAATTGTACAAG 58.138 34.615 14.65 0.00 41.85 3.16
2997 3466 7.168637 GTGCAGAAAATTCTACATAATGCATGG 59.831 37.037 0.00 0.00 35.59 3.66
3202 3671 6.934083 TGAACAGTGAATTCTATGTGCTAACA 59.066 34.615 17.35 10.56 41.58 2.41
3335 3805 3.679917 CGTGCTGTATCTTCATCCCTTGT 60.680 47.826 0.00 0.00 0.00 3.16
3339 3809 5.880332 TGCTGTATCTTCATCCCTTGTAAAC 59.120 40.000 0.00 0.00 0.00 2.01
3468 3938 4.625963 ACCCTGAGCTATCTTCTAAACCT 58.374 43.478 0.00 0.00 0.00 3.50
3510 3980 5.070446 CCTGGCATGTGTACCTTATCTTCTA 59.930 44.000 0.00 0.00 0.00 2.10
3610 4080 3.962063 TGCCTTCATTGATACAATGGCAT 59.038 39.130 19.61 0.00 43.29 4.40
3691 4161 1.149148 GAAGTGGTCTCCGCACTTTC 58.851 55.000 6.79 0.00 39.02 2.62
3843 4313 6.206243 CCTTCATTCAGATCTTCACAGTTGTT 59.794 38.462 0.00 0.00 0.00 2.83
3861 4331 1.726791 GTTGAGTGTATGAGGTGTGCG 59.273 52.381 0.00 0.00 0.00 5.34
4062 4532 2.576615 GGACATAAGAAGGGGATGCAC 58.423 52.381 0.00 0.00 0.00 4.57
4118 4588 0.394192 TCAGGACTCTGCAGTGTTGG 59.606 55.000 21.45 13.97 40.69 3.77
4416 4904 7.181125 AGGAAAGTGTAATCAGTAGAGGTGAAT 59.819 37.037 0.00 0.00 0.00 2.57
4454 5197 3.517602 CTTATTTTGCCGCCCCTTAAAC 58.482 45.455 0.00 0.00 0.00 2.01
4494 5248 4.088496 CGCAGCTAATACAAGTTTTTGCAC 59.912 41.667 10.86 3.95 37.85 4.57
4506 5260 4.947147 TTGCACGACACAGGCCCC 62.947 66.667 0.00 0.00 0.00 5.80
4717 5638 4.908601 TCCACCACACATGAAGTCTAAT 57.091 40.909 0.00 0.00 0.00 1.73
4718 5639 6.560003 ATCCACCACACATGAAGTCTAATA 57.440 37.500 0.00 0.00 0.00 0.98
4719 5640 6.367374 TCCACCACACATGAAGTCTAATAA 57.633 37.500 0.00 0.00 0.00 1.40
4743 5664 4.882427 GTCACCTCTCTATGTAGTGTGCTA 59.118 45.833 0.00 0.00 0.00 3.49
4747 5668 7.228906 TCACCTCTCTATGTAGTGTGCTATAAC 59.771 40.741 0.00 0.00 0.00 1.89
4750 5671 8.414003 CCTCTCTATGTAGTGTGCTATAACAAA 58.586 37.037 0.00 0.00 0.00 2.83
5246 6167 1.106944 AAAAACCCAGGGTCAGCACG 61.107 55.000 13.17 0.00 33.12 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.994432 CTGACATGATGACTAAAATCCTTTTAC 57.006 33.333 0.00 0.00 34.19 2.01
1 2 8.677300 GCTGACATGATGACTAAAATCCTTTTA 58.323 33.333 0.00 0.00 34.19 1.52
2 3 7.363268 GGCTGACATGATGACTAAAATCCTTTT 60.363 37.037 0.00 0.00 36.67 2.27
3 4 6.096001 GGCTGACATGATGACTAAAATCCTTT 59.904 38.462 0.00 0.00 0.00 3.11
5 6 5.128919 GGCTGACATGATGACTAAAATCCT 58.871 41.667 0.00 0.00 0.00 3.24
6 7 4.883585 TGGCTGACATGATGACTAAAATCC 59.116 41.667 0.00 0.00 0.00 3.01
7 8 6.441093 TTGGCTGACATGATGACTAAAATC 57.559 37.500 0.00 0.00 0.00 2.17
8 9 5.359009 CCTTGGCTGACATGATGACTAAAAT 59.641 40.000 0.00 0.00 0.00 1.82
9 10 4.701651 CCTTGGCTGACATGATGACTAAAA 59.298 41.667 0.00 0.00 0.00 1.52
10 11 4.264253 CCTTGGCTGACATGATGACTAAA 58.736 43.478 0.00 0.00 0.00 1.85
11 12 3.877559 CCTTGGCTGACATGATGACTAA 58.122 45.455 0.00 0.00 0.00 2.24
12 13 2.420547 GCCTTGGCTGACATGATGACTA 60.421 50.000 0.00 0.00 0.00 2.59
13 14 1.681166 GCCTTGGCTGACATGATGACT 60.681 52.381 0.00 0.00 0.00 3.41
14 15 0.737219 GCCTTGGCTGACATGATGAC 59.263 55.000 0.00 0.00 0.00 3.06
15 16 0.745486 CGCCTTGGCTGACATGATGA 60.745 55.000 10.12 0.00 0.00 2.92
16 17 1.725665 CGCCTTGGCTGACATGATG 59.274 57.895 10.12 0.00 0.00 3.07
17 18 2.117156 GCGCCTTGGCTGACATGAT 61.117 57.895 10.12 0.00 0.00 2.45
18 19 2.747460 GCGCCTTGGCTGACATGA 60.747 61.111 10.12 0.00 0.00 3.07
19 20 4.170062 CGCGCCTTGGCTGACATG 62.170 66.667 10.12 0.00 0.00 3.21
27 28 3.428282 GTAACCACCGCGCCTTGG 61.428 66.667 18.22 18.22 39.00 3.61
28 29 3.428282 GGTAACCACCGCGCCTTG 61.428 66.667 0.00 0.00 34.36 3.61
36 37 3.613432 CGAGATAATAGGCGGTAACCACC 60.613 52.174 0.00 0.00 41.93 4.61
37 38 3.254166 TCGAGATAATAGGCGGTAACCAC 59.746 47.826 0.00 0.00 0.00 4.16
38 39 3.489355 TCGAGATAATAGGCGGTAACCA 58.511 45.455 0.00 0.00 0.00 3.67
39 40 4.022503 ACTTCGAGATAATAGGCGGTAACC 60.023 45.833 0.00 0.00 0.00 2.85
40 41 4.916249 CACTTCGAGATAATAGGCGGTAAC 59.084 45.833 0.00 0.00 0.00 2.50
41 42 4.022589 CCACTTCGAGATAATAGGCGGTAA 60.023 45.833 0.00 0.00 0.00 2.85
42 43 3.504906 CCACTTCGAGATAATAGGCGGTA 59.495 47.826 0.00 0.00 0.00 4.02
43 44 2.296471 CCACTTCGAGATAATAGGCGGT 59.704 50.000 0.00 0.00 0.00 5.68
44 45 2.557056 TCCACTTCGAGATAATAGGCGG 59.443 50.000 0.00 0.00 0.00 6.13
45 46 3.366476 CCTCCACTTCGAGATAATAGGCG 60.366 52.174 0.00 0.00 30.97 5.52
46 47 3.574826 ACCTCCACTTCGAGATAATAGGC 59.425 47.826 0.00 0.00 30.97 3.93
47 48 4.083217 CGACCTCCACTTCGAGATAATAGG 60.083 50.000 0.00 0.00 37.43 2.57
48 49 4.083217 CCGACCTCCACTTCGAGATAATAG 60.083 50.000 0.00 0.00 37.43 1.73
49 50 3.819337 CCGACCTCCACTTCGAGATAATA 59.181 47.826 0.00 0.00 37.43 0.98
50 51 2.623889 CCGACCTCCACTTCGAGATAAT 59.376 50.000 0.00 0.00 37.43 1.28
51 52 2.022195 CCGACCTCCACTTCGAGATAA 58.978 52.381 0.00 0.00 37.43 1.75
52 53 1.676746 CCGACCTCCACTTCGAGATA 58.323 55.000 0.00 0.00 37.43 1.98
53 54 1.038130 CCCGACCTCCACTTCGAGAT 61.038 60.000 0.00 0.00 37.43 2.75
54 55 1.677966 CCCGACCTCCACTTCGAGA 60.678 63.158 0.00 0.00 37.43 4.04
55 56 1.658686 CTCCCGACCTCCACTTCGAG 61.659 65.000 0.00 0.00 37.43 4.04
56 57 1.677966 CTCCCGACCTCCACTTCGA 60.678 63.158 0.00 0.00 37.43 3.71
57 58 1.533469 AACTCCCGACCTCCACTTCG 61.533 60.000 0.00 0.00 34.93 3.79
58 59 0.246910 GAACTCCCGACCTCCACTTC 59.753 60.000 0.00 0.00 0.00 3.01
59 60 1.533469 CGAACTCCCGACCTCCACTT 61.533 60.000 0.00 0.00 0.00 3.16
60 61 1.977544 CGAACTCCCGACCTCCACT 60.978 63.158 0.00 0.00 0.00 4.00
61 62 1.321074 ATCGAACTCCCGACCTCCAC 61.321 60.000 0.00 0.00 41.70 4.02
62 63 0.256752 TATCGAACTCCCGACCTCCA 59.743 55.000 0.00 0.00 41.70 3.86
63 64 0.667453 GTATCGAACTCCCGACCTCC 59.333 60.000 0.00 0.00 41.70 4.30
64 65 0.667453 GGTATCGAACTCCCGACCTC 59.333 60.000 0.00 0.00 41.70 3.85
65 66 0.754587 GGGTATCGAACTCCCGACCT 60.755 60.000 7.08 0.00 41.70 3.85
66 67 0.754587 AGGGTATCGAACTCCCGACC 60.755 60.000 14.35 3.44 45.27 4.79
67 68 0.384669 CAGGGTATCGAACTCCCGAC 59.615 60.000 14.35 0.00 45.27 4.79
68 69 1.389609 GCAGGGTATCGAACTCCCGA 61.390 60.000 14.35 0.00 45.27 5.14
69 70 1.067582 GCAGGGTATCGAACTCCCG 59.932 63.158 14.35 11.36 45.27 5.14
70 71 0.105039 CTGCAGGGTATCGAACTCCC 59.895 60.000 5.57 12.97 41.36 4.30
71 72 0.105039 CCTGCAGGGTATCGAACTCC 59.895 60.000 26.14 0.00 0.00 3.85
72 73 3.669354 CCTGCAGGGTATCGAACTC 57.331 57.895 26.14 0.00 0.00 3.01
99 100 7.785506 TCCTCTCCCTTTTTATGTAACCAAAAA 59.214 33.333 0.00 0.00 33.73 1.94
100 101 7.299134 TCCTCTCCCTTTTTATGTAACCAAAA 58.701 34.615 0.00 0.00 0.00 2.44
101 102 6.854578 TCCTCTCCCTTTTTATGTAACCAAA 58.145 36.000 0.00 0.00 0.00 3.28
102 103 6.457159 TCCTCTCCCTTTTTATGTAACCAA 57.543 37.500 0.00 0.00 0.00 3.67
103 104 6.457159 TTCCTCTCCCTTTTTATGTAACCA 57.543 37.500 0.00 0.00 0.00 3.67
104 105 7.770366 TTTTCCTCTCCCTTTTTATGTAACC 57.230 36.000 0.00 0.00 0.00 2.85
126 127 1.586154 CGGCCCATCTCACGCTTTTT 61.586 55.000 0.00 0.00 0.00 1.94
127 128 2.040544 CGGCCCATCTCACGCTTTT 61.041 57.895 0.00 0.00 0.00 2.27
128 129 2.436646 CGGCCCATCTCACGCTTT 60.437 61.111 0.00 0.00 0.00 3.51
129 130 4.473520 CCGGCCCATCTCACGCTT 62.474 66.667 0.00 0.00 0.00 4.68
160 161 4.389576 CAAACGGGCGTCTGCAGC 62.390 66.667 9.47 3.23 45.35 5.25
161 162 4.389576 GCAAACGGGCGTCTGCAG 62.390 66.667 7.63 7.63 41.33 4.41
163 164 4.389576 CTGCAAACGGGCGTCTGC 62.390 66.667 0.00 0.00 41.97 4.26
164 165 1.781025 TTTCTGCAAACGGGCGTCTG 61.781 55.000 0.00 0.00 36.28 3.51
165 166 0.889186 ATTTCTGCAAACGGGCGTCT 60.889 50.000 0.00 0.00 36.28 4.18
166 167 0.800012 TATTTCTGCAAACGGGCGTC 59.200 50.000 0.00 0.00 36.28 5.19
167 168 0.519961 GTATTTCTGCAAACGGGCGT 59.480 50.000 0.00 0.00 36.28 5.68
168 169 0.519519 TGTATTTCTGCAAACGGGCG 59.480 50.000 0.00 0.00 36.28 6.13
169 170 1.268352 TGTGTATTTCTGCAAACGGGC 59.732 47.619 0.00 0.00 0.00 6.13
170 171 3.848272 ATGTGTATTTCTGCAAACGGG 57.152 42.857 0.00 0.00 0.00 5.28
171 172 6.146216 TGTTAATGTGTATTTCTGCAAACGG 58.854 36.000 0.00 0.00 0.00 4.44
172 173 6.305399 CCTGTTAATGTGTATTTCTGCAAACG 59.695 38.462 0.00 0.00 0.00 3.60
173 174 6.089417 GCCTGTTAATGTGTATTTCTGCAAAC 59.911 38.462 0.00 0.00 0.00 2.93
174 175 6.155827 GCCTGTTAATGTGTATTTCTGCAAA 58.844 36.000 0.00 0.00 0.00 3.68
175 176 5.242615 TGCCTGTTAATGTGTATTTCTGCAA 59.757 36.000 0.00 0.00 0.00 4.08
176 177 4.764308 TGCCTGTTAATGTGTATTTCTGCA 59.236 37.500 0.00 0.00 0.00 4.41
177 178 5.095490 GTGCCTGTTAATGTGTATTTCTGC 58.905 41.667 0.00 0.00 0.00 4.26
178 179 6.500684 AGTGCCTGTTAATGTGTATTTCTG 57.499 37.500 0.00 0.00 0.00 3.02
179 180 7.663905 TGTAAGTGCCTGTTAATGTGTATTTCT 59.336 33.333 0.00 0.00 0.00 2.52
180 181 7.812648 TGTAAGTGCCTGTTAATGTGTATTTC 58.187 34.615 0.00 0.00 0.00 2.17
181 182 7.574967 GCTGTAAGTGCCTGTTAATGTGTATTT 60.575 37.037 0.00 0.00 35.30 1.40
182 183 6.128007 GCTGTAAGTGCCTGTTAATGTGTATT 60.128 38.462 0.00 0.00 35.30 1.89
183 184 5.354234 GCTGTAAGTGCCTGTTAATGTGTAT 59.646 40.000 0.00 0.00 35.30 2.29
184 185 4.693566 GCTGTAAGTGCCTGTTAATGTGTA 59.306 41.667 0.00 0.00 35.30 2.90
185 186 3.502211 GCTGTAAGTGCCTGTTAATGTGT 59.498 43.478 0.00 0.00 35.30 3.72
186 187 3.424829 CGCTGTAAGTGCCTGTTAATGTG 60.425 47.826 0.00 0.00 37.80 3.21
187 188 2.742053 CGCTGTAAGTGCCTGTTAATGT 59.258 45.455 0.00 0.00 37.80 2.71
188 189 3.389687 CGCTGTAAGTGCCTGTTAATG 57.610 47.619 0.00 0.00 37.80 1.90
199 200 5.104900 AGGATCCTATTTTGACGCTGTAAGT 60.105 40.000 14.27 0.00 35.30 2.24
200 201 5.360591 AGGATCCTATTTTGACGCTGTAAG 58.639 41.667 14.27 0.00 0.00 2.34
201 202 5.353394 AGGATCCTATTTTGACGCTGTAA 57.647 39.130 14.27 0.00 0.00 2.41
202 203 5.128827 AGAAGGATCCTATTTTGACGCTGTA 59.871 40.000 16.55 0.00 0.00 2.74
203 204 3.914426 AGGATCCTATTTTGACGCTGT 57.086 42.857 14.27 0.00 0.00 4.40
204 205 4.446371 AGAAGGATCCTATTTTGACGCTG 58.554 43.478 16.55 0.00 0.00 5.18
205 206 4.407296 AGAGAAGGATCCTATTTTGACGCT 59.593 41.667 16.55 5.35 0.00 5.07
206 207 4.509600 CAGAGAAGGATCCTATTTTGACGC 59.490 45.833 16.55 3.21 0.00 5.19
207 208 5.907207 TCAGAGAAGGATCCTATTTTGACG 58.093 41.667 16.55 0.00 0.00 4.35
208 209 8.043710 TCTTTCAGAGAAGGATCCTATTTTGAC 58.956 37.037 16.55 3.03 0.00 3.18
209 210 8.150827 TCTTTCAGAGAAGGATCCTATTTTGA 57.849 34.615 16.55 13.77 0.00 2.69
210 211 7.012232 GCTCTTTCAGAGAAGGATCCTATTTTG 59.988 40.741 16.55 11.66 45.07 2.44
211 212 7.053498 GCTCTTTCAGAGAAGGATCCTATTTT 58.947 38.462 16.55 0.00 45.07 1.82
212 213 6.591001 GCTCTTTCAGAGAAGGATCCTATTT 58.409 40.000 16.55 0.00 45.07 1.40
213 214 5.221422 CGCTCTTTCAGAGAAGGATCCTATT 60.221 44.000 16.55 6.12 45.07 1.73
214 215 4.280677 CGCTCTTTCAGAGAAGGATCCTAT 59.719 45.833 16.55 6.93 45.07 2.57
215 216 3.634448 CGCTCTTTCAGAGAAGGATCCTA 59.366 47.826 16.55 0.00 45.07 2.94
216 217 2.430332 CGCTCTTTCAGAGAAGGATCCT 59.570 50.000 9.02 9.02 45.07 3.24
217 218 2.820330 CGCTCTTTCAGAGAAGGATCC 58.180 52.381 2.48 2.48 45.07 3.36
218 219 2.159114 AGCGCTCTTTCAGAGAAGGATC 60.159 50.000 2.64 0.00 45.07 3.36
219 220 1.830477 AGCGCTCTTTCAGAGAAGGAT 59.170 47.619 2.64 0.00 45.07 3.24
220 221 1.203523 GAGCGCTCTTTCAGAGAAGGA 59.796 52.381 29.88 0.00 45.07 3.36
221 222 1.639280 GAGCGCTCTTTCAGAGAAGG 58.361 55.000 29.88 0.00 45.07 3.46
222 223 1.204467 AGGAGCGCTCTTTCAGAGAAG 59.796 52.381 34.46 0.00 45.07 2.85
223 224 1.261480 AGGAGCGCTCTTTCAGAGAA 58.739 50.000 34.46 0.00 45.07 2.87
224 225 1.261480 AAGGAGCGCTCTTTCAGAGA 58.739 50.000 34.46 0.00 45.07 3.10
225 226 2.949451 TAAGGAGCGCTCTTTCAGAG 57.051 50.000 34.44 0.00 45.04 3.35
226 227 3.895232 ATTAAGGAGCGCTCTTTCAGA 57.105 42.857 34.44 22.46 31.18 3.27
227 228 4.025313 GCTAATTAAGGAGCGCTCTTTCAG 60.025 45.833 34.44 25.61 31.18 3.02
228 229 3.871594 GCTAATTAAGGAGCGCTCTTTCA 59.128 43.478 34.44 25.71 31.18 2.69
229 230 4.025313 CAGCTAATTAAGGAGCGCTCTTTC 60.025 45.833 34.44 20.40 43.72 2.62
230 231 3.873952 CAGCTAATTAAGGAGCGCTCTTT 59.126 43.478 33.21 33.21 43.72 2.52
231 232 3.133003 TCAGCTAATTAAGGAGCGCTCTT 59.867 43.478 34.46 26.82 43.72 2.85
232 233 2.695666 TCAGCTAATTAAGGAGCGCTCT 59.304 45.455 34.46 20.03 43.72 4.09
233 234 3.099267 TCAGCTAATTAAGGAGCGCTC 57.901 47.619 29.38 29.38 43.72 5.03
234 235 3.070159 TGATCAGCTAATTAAGGAGCGCT 59.930 43.478 11.27 11.27 43.72 5.92
235 236 3.393800 TGATCAGCTAATTAAGGAGCGC 58.606 45.455 0.00 0.00 43.72 5.92
236 237 4.325741 CGATGATCAGCTAATTAAGGAGCG 59.674 45.833 9.64 2.72 43.72 5.03
237 238 5.233988 ACGATGATCAGCTAATTAAGGAGC 58.766 41.667 9.64 3.68 39.08 4.70
238 239 6.450545 TGACGATGATCAGCTAATTAAGGAG 58.549 40.000 9.64 0.00 0.00 3.69
239 240 6.265422 TCTGACGATGATCAGCTAATTAAGGA 59.735 38.462 9.64 0.00 44.94 3.36
240 241 6.450545 TCTGACGATGATCAGCTAATTAAGG 58.549 40.000 9.64 0.00 44.94 2.69
241 242 7.366513 TCTCTGACGATGATCAGCTAATTAAG 58.633 38.462 9.64 0.20 44.94 1.85
242 243 7.277174 TCTCTGACGATGATCAGCTAATTAA 57.723 36.000 9.64 0.00 44.94 1.40
243 244 6.884280 TCTCTGACGATGATCAGCTAATTA 57.116 37.500 9.64 0.00 44.94 1.40
244 245 5.781210 TCTCTGACGATGATCAGCTAATT 57.219 39.130 9.64 0.00 44.94 1.40
245 246 5.781210 TTCTCTGACGATGATCAGCTAAT 57.219 39.130 9.64 0.00 44.94 1.73
246 247 5.105756 TGTTTCTCTGACGATGATCAGCTAA 60.106 40.000 9.64 0.00 44.94 3.09
247 248 4.399303 TGTTTCTCTGACGATGATCAGCTA 59.601 41.667 9.64 0.00 44.94 3.32
248 249 3.194329 TGTTTCTCTGACGATGATCAGCT 59.806 43.478 9.64 0.00 44.94 4.24
249 250 3.515630 TGTTTCTCTGACGATGATCAGC 58.484 45.455 0.00 0.00 44.94 4.26
250 251 5.167121 AGTTGTTTCTCTGACGATGATCAG 58.833 41.667 0.09 0.00 46.40 2.90
251 252 5.139435 AGTTGTTTCTCTGACGATGATCA 57.861 39.130 0.00 0.00 0.00 2.92
252 253 6.302615 CAAAGTTGTTTCTCTGACGATGATC 58.697 40.000 0.00 0.00 0.00 2.92
286 287 7.589958 TTTTGGTAGTATTTTGAGCTTCCAA 57.410 32.000 0.00 0.00 37.71 3.53
311 312 2.131067 CCACCCAAAAACCCGCACT 61.131 57.895 0.00 0.00 0.00 4.40
324 325 2.438434 CCGCACCATTCTCCACCC 60.438 66.667 0.00 0.00 0.00 4.61
333 334 3.191182 GAAGAATTCCCCGCACCAT 57.809 52.632 0.65 0.00 39.83 3.55
401 402 6.280855 TCTTCCGAAGATTTACACAGATCA 57.719 37.500 6.75 0.00 31.20 2.92
506 507 2.502492 GCTAGGATGCAGCCGAGGA 61.502 63.158 28.85 10.08 32.03 3.71
533 534 5.752036 TCTCATCCAAGACAATGTCTCTT 57.248 39.130 17.02 0.00 42.59 2.85
535 536 7.271511 AGTTATCTCATCCAAGACAATGTCTC 58.728 38.462 17.02 0.00 42.59 3.36
559 560 6.154203 TCTTACACCTATCAGCATCAAGAG 57.846 41.667 0.00 0.00 0.00 2.85
562 563 6.484364 TGATCTTACACCTATCAGCATCAA 57.516 37.500 0.00 0.00 0.00 2.57
572 573 7.147742 TGCATTACTGTGATGATCTTACACCTA 60.148 37.037 15.80 3.30 34.18 3.08
578 579 7.274447 TCACATGCATTACTGTGATGATCTTA 58.726 34.615 15.19 0.00 45.01 2.10
691 1072 2.223618 CGAACCGAAAAGGAGGCAAAAA 60.224 45.455 0.00 0.00 45.00 1.94
741 1122 5.005740 AGCAAATCTAGCACACAAATCTGA 58.994 37.500 0.00 0.00 0.00 3.27
747 1128 6.037786 ACTAGTAGCAAATCTAGCACACAA 57.962 37.500 0.00 0.00 37.67 3.33
749 1130 5.897050 AGACTAGTAGCAAATCTAGCACAC 58.103 41.667 0.00 0.00 37.67 3.82
815 1196 1.765904 TCTGCCACAAGGTTACTCACA 59.234 47.619 0.00 0.00 37.19 3.58
823 1204 2.514803 GGTTACAATCTGCCACAAGGT 58.485 47.619 0.00 0.00 37.19 3.50
890 1275 2.477825 GCATGAATTCGAGAGCAGCTA 58.522 47.619 0.00 0.00 0.00 3.32
891 1276 1.297664 GCATGAATTCGAGAGCAGCT 58.702 50.000 0.00 0.00 0.00 4.24
892 1277 0.307146 GGCATGAATTCGAGAGCAGC 59.693 55.000 0.00 0.00 0.00 5.25
893 1278 1.660167 TGGCATGAATTCGAGAGCAG 58.340 50.000 0.00 0.00 0.00 4.24
894 1279 2.112380 TTGGCATGAATTCGAGAGCA 57.888 45.000 0.00 0.00 0.00 4.26
895 1280 3.314635 AGAATTGGCATGAATTCGAGAGC 59.685 43.478 11.96 2.11 44.03 4.09
896 1281 5.496133 AAGAATTGGCATGAATTCGAGAG 57.504 39.130 11.96 0.00 44.03 3.20
897 1282 7.572523 ATTAAGAATTGGCATGAATTCGAGA 57.427 32.000 11.96 5.14 44.03 4.04
898 1283 8.133627 AGAATTAAGAATTGGCATGAATTCGAG 58.866 33.333 11.96 0.00 44.03 4.04
899 1284 7.999679 AGAATTAAGAATTGGCATGAATTCGA 58.000 30.769 11.96 4.68 44.03 3.71
900 1285 9.390795 CTAGAATTAAGAATTGGCATGAATTCG 57.609 33.333 11.96 0.00 44.03 3.34
901 1286 9.688592 CCTAGAATTAAGAATTGGCATGAATTC 57.311 33.333 10.47 10.47 41.02 2.17
902 1287 9.425248 TCCTAGAATTAAGAATTGGCATGAATT 57.575 29.630 0.00 0.00 0.00 2.17
903 1288 9.075678 CTCCTAGAATTAAGAATTGGCATGAAT 57.924 33.333 0.00 0.00 0.00 2.57
904 1289 7.503566 CCTCCTAGAATTAAGAATTGGCATGAA 59.496 37.037 0.00 0.00 0.00 2.57
905 1290 7.000472 CCTCCTAGAATTAAGAATTGGCATGA 59.000 38.462 0.00 0.00 0.00 3.07
906 1291 6.294397 GCCTCCTAGAATTAAGAATTGGCATG 60.294 42.308 0.00 0.00 34.43 4.06
907 1292 5.772169 GCCTCCTAGAATTAAGAATTGGCAT 59.228 40.000 0.00 0.00 34.43 4.40
908 1293 5.133221 GCCTCCTAGAATTAAGAATTGGCA 58.867 41.667 0.00 0.00 34.43 4.92
909 1294 4.520874 GGCCTCCTAGAATTAAGAATTGGC 59.479 45.833 0.00 0.00 33.87 4.52
910 1295 4.757149 CGGCCTCCTAGAATTAAGAATTGG 59.243 45.833 0.00 0.00 0.00 3.16
911 1296 5.611374 TCGGCCTCCTAGAATTAAGAATTG 58.389 41.667 0.00 0.00 0.00 2.32
912 1297 5.888982 TCGGCCTCCTAGAATTAAGAATT 57.111 39.130 0.00 0.00 0.00 2.17
913 1298 5.888982 TTCGGCCTCCTAGAATTAAGAAT 57.111 39.130 0.00 0.00 0.00 2.40
914 1299 5.424252 TCTTTCGGCCTCCTAGAATTAAGAA 59.576 40.000 0.00 0.00 0.00 2.52
915 1300 4.960469 TCTTTCGGCCTCCTAGAATTAAGA 59.040 41.667 0.00 0.00 0.00 2.10
916 1301 5.277857 TCTTTCGGCCTCCTAGAATTAAG 57.722 43.478 0.00 0.00 0.00 1.85
917 1302 5.189145 AGTTCTTTCGGCCTCCTAGAATTAA 59.811 40.000 0.00 0.00 0.00 1.40
918 1303 4.715297 AGTTCTTTCGGCCTCCTAGAATTA 59.285 41.667 0.00 0.00 0.00 1.40
919 1304 3.519913 AGTTCTTTCGGCCTCCTAGAATT 59.480 43.478 0.00 0.00 0.00 2.17
920 1305 3.108376 AGTTCTTTCGGCCTCCTAGAAT 58.892 45.455 0.00 0.00 0.00 2.40
921 1306 2.233922 CAGTTCTTTCGGCCTCCTAGAA 59.766 50.000 0.00 1.68 0.00 2.10
922 1307 1.825474 CAGTTCTTTCGGCCTCCTAGA 59.175 52.381 0.00 0.00 0.00 2.43
923 1308 1.134670 CCAGTTCTTTCGGCCTCCTAG 60.135 57.143 0.00 0.00 0.00 3.02
924 1309 0.902531 CCAGTTCTTTCGGCCTCCTA 59.097 55.000 0.00 0.00 0.00 2.94
925 1310 1.679898 CCAGTTCTTTCGGCCTCCT 59.320 57.895 0.00 0.00 0.00 3.69
926 1311 1.377333 CCCAGTTCTTTCGGCCTCC 60.377 63.158 0.00 0.00 0.00 4.30
927 1312 2.041115 GCCCAGTTCTTTCGGCCTC 61.041 63.158 0.00 0.00 35.23 4.70
928 1313 2.034221 GCCCAGTTCTTTCGGCCT 59.966 61.111 0.00 0.00 35.23 5.19
1012 1397 1.400494 CGAATTTCTTTAGCCCCCGTG 59.600 52.381 0.00 0.00 0.00 4.94
1013 1398 1.279846 TCGAATTTCTTTAGCCCCCGT 59.720 47.619 0.00 0.00 0.00 5.28
1015 1400 2.943690 GACTCGAATTTCTTTAGCCCCC 59.056 50.000 0.00 0.00 0.00 5.40
1152 1545 2.046292 GGAAGAGGAAGAGGAGATGGG 58.954 57.143 0.00 0.00 0.00 4.00
1165 1558 3.031013 GAGGAAGAGGAAGAGGAAGAGG 58.969 54.545 0.00 0.00 0.00 3.69
1166 1559 3.701040 CAGAGGAAGAGGAAGAGGAAGAG 59.299 52.174 0.00 0.00 0.00 2.85
1167 1560 3.335183 TCAGAGGAAGAGGAAGAGGAAGA 59.665 47.826 0.00 0.00 0.00 2.87
1168 1561 3.447229 GTCAGAGGAAGAGGAAGAGGAAG 59.553 52.174 0.00 0.00 0.00 3.46
1169 1562 3.436243 GTCAGAGGAAGAGGAAGAGGAA 58.564 50.000 0.00 0.00 0.00 3.36
1170 1563 2.619332 CGTCAGAGGAAGAGGAAGAGGA 60.619 54.545 0.00 0.00 0.00 3.71
1171 1564 1.748493 CGTCAGAGGAAGAGGAAGAGG 59.252 57.143 0.00 0.00 0.00 3.69
1204 1597 3.798511 GGAAGGGGGCGAAGAGGG 61.799 72.222 0.00 0.00 0.00 4.30
1347 1740 3.403057 CGGAGTGCGTGGTGTTCG 61.403 66.667 0.00 0.00 0.00 3.95
1365 1758 1.229209 AAGGAGAACAGGGCGAGGA 60.229 57.895 0.00 0.00 0.00 3.71
1368 1761 0.321671 CAAGAAGGAGAACAGGGCGA 59.678 55.000 0.00 0.00 0.00 5.54
1410 1803 1.277273 CTGCTCCTCCACATGAGTTCA 59.723 52.381 0.00 0.00 39.65 3.18
1416 1809 0.179062 GGTAGCTGCTCCTCCACATG 60.179 60.000 4.91 0.00 0.00 3.21
1417 1810 0.618680 TGGTAGCTGCTCCTCCACAT 60.619 55.000 4.91 0.00 0.00 3.21
1467 1860 2.620115 AGTTCTAACGACGAGGTTGACA 59.380 45.455 0.00 0.00 0.00 3.58
1511 1904 0.179119 GAACGACGGATAGGGTGTGG 60.179 60.000 0.00 0.00 0.00 4.17
1559 1952 1.591768 GGATTTGGGGGTAGGTCAGA 58.408 55.000 0.00 0.00 0.00 3.27
1584 1977 0.174845 TTAGAGTCGCATTGGGTCGG 59.825 55.000 0.24 0.00 0.00 4.79
1585 1978 1.560923 CTTAGAGTCGCATTGGGTCG 58.439 55.000 0.24 0.00 0.00 4.79
1586 1979 1.134670 AGCTTAGAGTCGCATTGGGTC 60.135 52.381 0.24 0.00 0.00 4.46
1587 1980 0.905357 AGCTTAGAGTCGCATTGGGT 59.095 50.000 0.24 0.00 0.00 4.51
1588 1981 1.293924 CAGCTTAGAGTCGCATTGGG 58.706 55.000 0.00 0.00 0.00 4.12
1589 1982 0.654683 GCAGCTTAGAGTCGCATTGG 59.345 55.000 0.00 0.00 0.00 3.16
1590 1983 0.654683 GGCAGCTTAGAGTCGCATTG 59.345 55.000 0.00 0.00 0.00 2.82
1591 1984 0.807667 CGGCAGCTTAGAGTCGCATT 60.808 55.000 0.00 0.00 0.00 3.56
1592 1985 1.227089 CGGCAGCTTAGAGTCGCAT 60.227 57.895 0.00 0.00 0.00 4.73
1593 1986 2.181777 CGGCAGCTTAGAGTCGCA 59.818 61.111 0.00 0.00 0.00 5.10
1715 2108 4.963815 CAAAAATTGCGAGCCGGT 57.036 50.000 1.90 0.00 0.00 5.28
1780 2173 6.599244 CAGCCAAAATTATCTGAAGGTCAGTA 59.401 38.462 5.23 0.00 44.58 2.74
1954 2353 5.254115 GCTATGAGGGGTTACAAGAAAACT 58.746 41.667 0.00 0.00 0.00 2.66
1962 2362 0.031917 TCCGGCTATGAGGGGTTACA 60.032 55.000 0.00 0.00 0.00 2.41
1989 2389 2.359848 AGTGGCAACTAACGGAAAAACC 59.640 45.455 0.00 0.00 33.79 3.27
1991 2391 2.223618 GCAGTGGCAACTAACGGAAAAA 60.224 45.455 0.00 0.00 40.72 1.94
1998 2400 1.537202 CCAAGAGCAGTGGCAACTAAC 59.463 52.381 0.00 0.00 44.61 2.34
2032 2434 8.992073 GGACAAAATCTGCAACTATGAAATTTT 58.008 29.630 0.00 0.00 30.36 1.82
2035 2437 7.230849 TGGACAAAATCTGCAACTATGAAAT 57.769 32.000 0.00 0.00 0.00 2.17
2105 2508 0.519999 GCTGAGAATTTGCAGTCGCG 60.520 55.000 0.00 0.00 42.97 5.87
2173 2576 5.355910 AGAAACGCTTGTTTAGAAGAAACCA 59.644 36.000 0.00 0.00 45.55 3.67
2483 2945 8.836413 TGCAATATTAAAAGCCTATGTACTCAC 58.164 33.333 0.00 0.00 0.00 3.51
2530 2994 8.260270 AGCTTTCATAAAAATCATGAAAAGGC 57.740 30.769 0.00 10.96 46.37 4.35
2531 2995 9.649167 AGAGCTTTCATAAAAATCATGAAAAGG 57.351 29.630 0.00 3.46 46.37 3.11
2667 3131 6.918626 TGATAGCATCTATCAGTGAGCTAAC 58.081 40.000 13.23 11.54 38.00 2.34
2811 3280 7.617122 GCAGTAACGTTTTGCATTAACAGATTG 60.617 37.037 24.11 5.19 37.75 2.67
2830 3299 3.311322 TGTACAAGCACAACTGCAGTAAC 59.689 43.478 22.01 9.91 46.97 2.50
2836 3305 5.088739 GTGAATATGTACAAGCACAACTGC 58.911 41.667 0.00 0.00 44.63 4.40
2884 3353 2.892374 TCATGCATCACGAACAGTAGG 58.108 47.619 0.00 0.00 0.00 3.18
2927 3396 6.216569 TGCACTGTACTAGAAACTTCTCTTG 58.783 40.000 0.00 0.00 38.70 3.02
2928 3397 6.041069 ACTGCACTGTACTAGAAACTTCTCTT 59.959 38.462 0.00 0.00 38.70 2.85
2929 3398 5.536916 ACTGCACTGTACTAGAAACTTCTCT 59.463 40.000 0.00 0.00 38.70 3.10
2943 3412 7.795482 ACTTGTACAATTTAACTGCACTGTA 57.205 32.000 9.13 0.00 0.00 2.74
2997 3466 3.216800 TGCAGGCCAGATATTGTCAATC 58.783 45.455 5.01 0.00 0.00 2.67
3335 3805 7.831690 TGTTGCCCATTACAGAATCATAGTTTA 59.168 33.333 0.00 0.00 0.00 2.01
3339 3809 6.698008 TTGTTGCCCATTACAGAATCATAG 57.302 37.500 0.00 0.00 0.00 2.23
3510 3980 2.417978 CCACATGTTGTGCAGTGGT 58.582 52.632 11.41 0.00 46.51 4.16
3543 4013 2.315925 ATGGATGAAGCTGGTACACG 57.684 50.000 0.00 0.00 0.00 4.49
3610 4080 2.025321 GGAAAAGCCATCCAGGGACTAA 60.025 50.000 0.00 0.00 36.92 2.24
3691 4161 3.125829 GCCAATATGATGTGATACCGCAG 59.874 47.826 0.00 0.00 36.09 5.18
3696 4166 7.392673 AGAAGAATGGCCAATATGATGTGATAC 59.607 37.037 10.96 0.00 0.00 2.24
3843 4313 0.389817 GCGCACACCTCATACACTCA 60.390 55.000 0.30 0.00 0.00 3.41
3989 4459 5.946377 TCAGCTAGTTCTCTATCTCACACAA 59.054 40.000 0.00 0.00 0.00 3.33
4062 4532 3.325870 ACCCGTGATGATTGCATATACG 58.674 45.455 0.00 0.00 41.22 3.06
4494 5248 1.300931 CATATCGGGGCCTGTGTCG 60.301 63.158 13.14 2.01 0.00 4.35
4506 5260 8.775220 TTCAAAACAACTACAACAACATATCG 57.225 30.769 0.00 0.00 0.00 2.92
4717 5638 5.357314 GCACACTACATAGAGAGGTGACTTA 59.643 44.000 0.00 0.00 44.43 2.24
4718 5639 4.158764 GCACACTACATAGAGAGGTGACTT 59.841 45.833 0.00 0.00 44.43 3.01
4841 5762 4.734398 ACTTTTCTGGCAAATGTCACAA 57.266 36.364 0.00 0.00 0.00 3.33
5186 6107 3.119495 GCCTTAATTTCCATGTCGCACTT 60.119 43.478 0.00 0.00 0.00 3.16
5246 6167 4.414337 AGGCCACATGAAGACTATTCTC 57.586 45.455 5.01 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.