AutoCloner

Multiple sequence alignment - TraesCS6D01G197400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS6D01G197400	chr6D	100.000	3842	0	0	1	3842	274347913	274344072	0.000000e+00	7095.0
1	TraesCS6D01G197400	chr6A	97.495	2874	62	6	931	3800	393542077	393544944	0.000000e+00	4900.0
2	TraesCS6D01G197400	chr6B	97.356	2874	57	7	935	3800	436807906	436805044	0.000000e+00	4868.0
3	TraesCS6D01G197400	chr6B	93.023	129	9	0	3672	3800	436802086	436801958	5.070000e-44	189.0
4	TraesCS6D01G197400	chr6B	97.619	42	1	0	3410	3451	487155235	487155276	5.320000e-09	73.1
5	TraesCS6D01G197400	chr7D	97.246	835	13	2	109	933	466667834	466668668	0.000000e+00	1406.0
6	TraesCS6D01G197400	chr7D	93.709	302	15	3	395	692	536978921	536978620	2.110000e-122	449.0
7	TraesCS6D01G197400	chr7D	92.116	241	17	1	1	239	536980379	536980139	4.750000e-89	339.0
8	TraesCS6D01G197400	chr7D	92.473	93	4	3	841	933	466667592	466667503	3.110000e-26	130.0
9	TraesCS6D01G197400	chr7D	94.048	84	5	0	687	770	536978591	536978508	1.120000e-25	128.0
10	TraesCS6D01G197400	chr3B	98.184	771	13	1	1	770	157305496	157306266	0.000000e+00	1345.0
11	TraesCS6D01G197400	chr3B	97.619	84	2	0	784	867	157306254	157306337	1.110000e-30	145.0
12	TraesCS6D01G197400	chr3B	92.000	100	6	2	841	940	157304706	157304609	5.180000e-29	139.0
13	TraesCS6D01G197400	chr3B	88.542	96	7	4	841	935	157306344	157306436	3.140000e-21	113.0
14	TraesCS6D01G197400	chr3B	87.719	57	3	4	3394	3449	755290814	755290867	3.200000e-06	63.9
15	TraesCS6D01G197400	chr2B	94.051	706	27	5	212	902	758259131	758259836	0.000000e+00	1057.0
16	TraesCS6D01G197400	chr2B	92.929	693	36	8	1	686	71228537	71229223	0.000000e+00	996.0
17	TraesCS6D01G197400	chr2B	91.763	692	45	8	1	686	520902322	520903007	0.000000e+00	952.0
18	TraesCS6D01G197400	chr7A	94.034	704	27	6	212	902	492430863	492431564	0.000000e+00	1053.0
19	TraesCS6D01G197400	chr7B	93.875	702	30	9	212	901	504088750	504089450	0.000000e+00	1046.0
20	TraesCS6D01G197400	chr7B	80.298	604	49	33	293	871	619368003	619367445	3.600000e-105	392.0
21	TraesCS6D01G197400	chr1A	87.476	511	58	4	1	506	557512428	557512937	5.530000e-163	584.0
22	TraesCS6D01G197400	chr1A	94.286	70	4	0	792	861	24140940	24140871	1.460000e-19	108.0
23	TraesCS6D01G197400	chr1A	97.619	42	1	0	3409	3450	10076144	10076185	5.320000e-09	73.1
24	TraesCS6D01G197400	chr1D	87.205	508	57	5	6	506	465136486	465136992	4.310000e-159	571.0
25	TraesCS6D01G197400	chr4B	86.000	250	30	3	1	245	112075626	112075875	2.940000e-66	263.0
26	TraesCS6D01G197400	chr5B	96.154	52	2	0	3400	3451	606020199	606020250	6.840000e-13	86.1
27	TraesCS6D01G197400	chr3A	97.778	45	1	0	3410	3454	437869516	437869560	1.140000e-10	78.7
28	TraesCS6D01G197400	chr3A	97.674	43	1	0	3404	3446	561093495	561093537	1.480000e-09	75.0
29	TraesCS6D01G197400	chr4D	95.652	46	2	0	3404	3449	298241437	298241392	1.480000e-09	75.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS6D01G197400	chr6D	274344072	274347913	3841	True	7095.000000	7095	100.000000	1	3842	1	chr6D.!!$R1	3841
1	TraesCS6D01G197400	chr6A	393542077	393544944	2867	False	4900.000000	4900	97.495000	931	3800	1	chr6A.!!$F1	2869
2	TraesCS6D01G197400	chr6B	436801958	436807906	5948	True	2528.500000	4868	95.189500	935	3800	2	chr6B.!!$R1	2865
3	TraesCS6D01G197400	chr7D	466667834	466668668	834	False	1406.000000	1406	97.246000	109	933	1	chr7D.!!$F1	824
4	TraesCS6D01G197400	chr7D	536978508	536980379	1871	True	305.333333	449	93.291000	1	770	3	chr7D.!!$R2	769
5	TraesCS6D01G197400	chr3B	157305496	157306436	940	False	534.333333	1345	94.781667	1	935	3	chr3B.!!$F2	934
6	TraesCS6D01G197400	chr2B	758259131	758259836	705	False	1057.000000	1057	94.051000	212	902	1	chr2B.!!$F3	690
7	TraesCS6D01G197400	chr2B	71228537	71229223	686	False	996.000000	996	92.929000	1	686	1	chr2B.!!$F1	685
8	TraesCS6D01G197400	chr2B	520902322	520903007	685	False	952.000000	952	91.763000	1	686	1	chr2B.!!$F2	685
9	TraesCS6D01G197400	chr7A	492430863	492431564	701	False	1053.000000	1053	94.034000	212	902	1	chr7A.!!$F1	690
10	TraesCS6D01G197400	chr7B	504088750	504089450	700	False	1046.000000	1046	93.875000	212	901	1	chr7B.!!$F1	689
11	TraesCS6D01G197400	chr7B	619367445	619368003	558	True	392.000000	392	80.298000	293	871	1	chr7B.!!$R1	578
12	TraesCS6D01G197400	chr1A	557512428	557512937	509	False	584.000000	584	87.476000	1	506	1	chr1A.!!$F2	505
13	TraesCS6D01G197400	chr1D	465136486	465136992	506	False	571.000000	571	87.205000	6	506	1	chr1D.!!$F1	500

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	End Stability	Orientation
770	1882	0.947244	CTCTTCAGTTTTGCGGCAGT	59.053	50.000	1.67	4.40	F
987	2136	1.532604	GCAAAACCCTAGCCACCACC	61.533	60.000	0.00	4.61	F
1550	2699	2.435586	CTCCAGCAACGCCCTCTG	60.436	66.667	0.00	3.35	F

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
1719	2868	0.477597	AGGTCAGGTTCCCAATCCCA	60.478	55.000	0.00	4.37	R
1976	3125	1.565759	CCCCAGTGATCTCATTTCCCA	59.434	52.381	0.00	4.37	R
3484	4643	3.776969	ACATAGAGAGAGAATGGTTGCCA	59.223	43.478	38.19	4.92	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
86	89	6.109156	TGTTCTCCTTTTACATGTAGCAGA	57.891	37.500	5.56	0.00	0.00	4.26
168	174	3.091545	CACATGACTTGCCTATGGGTTT	58.908	45.455	0.00	0.00	34.45	3.27
751	1863	2.813061	TCAGTTTTGCAGCAGCTTTTC	58.187	42.857	1.76	0.00	42.74	2.29
770	1882	0.947244	CTCTTCAGTTTTGCGGCAGT	59.053	50.000	1.67	0.00	0.00	4.40
829	1947	3.903783	GCATTAGGCAACGGCTGA	58.096	55.556	0.00	0.00	43.97	4.26
987	2136	1.532604	GCAAAACCCTAGCCACCACC	61.533	60.000	0.00	0.00	0.00	4.61
1155	2304	2.681778	CTCTCCTCCTGGCACGGT	60.682	66.667	0.00	0.00	0.00	4.83
1375	2524	3.964221	CTACCGCGCTCGCTTGTCA	62.964	63.158	5.56	0.00	39.32	3.58
1423	2572	4.052518	GTGCCATCCCCACCTGCT	62.053	66.667	0.00	0.00	0.00	4.24
1550	2699	2.435586	CTCCAGCAACGCCCTCTG	60.436	66.667	0.00	0.00	0.00	3.35
1976	3125	3.648067	TCTCTTGAGGTGGTGATCTTGTT	59.352	43.478	0.00	0.00	0.00	2.83
2040	3189	1.381872	GCAGAGCCTGAGGTCCCTA	60.382	63.158	0.00	0.00	41.64	3.53
2124	3273	2.507484	CAGTGGCTTGATTTGTCTGGA	58.493	47.619	0.00	0.00	0.00	3.86
2130	3279	5.415701	GTGGCTTGATTTGTCTGGAAATAGA	59.584	40.000	0.00	0.00	0.00	1.98
2202	3351	3.570212	GCAGGTGGTGGTCAGGGT	61.570	66.667	0.00	0.00	0.00	4.34
2819	3971	5.588648	CCAAGGCTAGGAATTTCGTATTTCA	59.411	40.000	0.00	0.00	0.00	2.69
2852	4004	7.780822	AGGATAGAATATTGAGGTTAGAGGGA	58.219	38.462	0.00	0.00	0.00	4.20
2857	4010	7.085601	AGAATATTGAGGTTAGAGGGAGGATT	58.914	38.462	0.00	0.00	0.00	3.01
3000	4153	4.877378	TGTTGTTGTACGGAGGTCTAAT	57.123	40.909	0.00	0.00	0.00	1.73
3008	4161	6.855763	TGTACGGAGGTCTAATCCTTTTTA	57.144	37.500	0.00	0.00	38.02	1.52
3164	4322	3.309682	CCGATGAATGTTGTACGAGCAAT	59.690	43.478	0.00	0.00	0.00	3.56
3168	4327	4.707563	TGAATGTTGTACGAGCAATTTCG	58.292	39.130	0.00	0.00	45.70	3.46
3237	4396	5.368989	AGTCGAAATTCTGTTTCCTGTTCT	58.631	37.500	0.00	0.00	0.00	3.01
3314	4473	7.038870	TGTCAATTTGATTGGAGATCATTGGTT	60.039	33.333	1.78	0.00	40.61	3.67
3437	4596	9.769093	CCTACAAAAACGTCTTATATTTTGAGG	57.231	33.333	21.46	18.45	42.48	3.86
3483	4642	3.519107	TCATGTGATAGTTCCCAGCAAGA	59.481	43.478	0.00	0.00	0.00	3.02
3484	4643	4.164796	TCATGTGATAGTTCCCAGCAAGAT	59.835	41.667	0.00	0.00	0.00	2.40
3560	4719	3.551846	AGGTGAAACAAGTTACCACTGG	58.448	45.455	13.98	0.00	39.98	4.00
3717	4876	4.082571	GCAATAAAATGAGTCAGTGCTGGT	60.083	41.667	0.00	0.00	0.00	4.00
3777	8022	2.168106	TGAACTTGCTGCAACCAATGTT	59.832	40.909	11.69	13.28	34.14	2.71
3791	8036	1.042229	AATGTTGCAGTGCACACCAT	58.958	45.000	19.58	16.72	38.71	3.55
3796	8041	1.286880	GCAGTGCACACCATGGAAC	59.713	57.895	21.47	8.34	0.00	3.62
3800	8045	1.682854	AGTGCACACCATGGAACTTTG	59.317	47.619	21.47	8.39	0.00	2.77
3801	8046	1.408702	GTGCACACCATGGAACTTTGT	59.591	47.619	21.47	9.15	0.00	2.83
3802	8047	2.106566	TGCACACCATGGAACTTTGTT	58.893	42.857	21.47	0.00	0.00	2.83
3803	8048	2.100584	TGCACACCATGGAACTTTGTTC	59.899	45.455	21.47	6.94	0.00	3.18
3804	8049	2.100584	GCACACCATGGAACTTTGTTCA	59.899	45.455	21.47	0.39	0.00	3.18
3805	8050	3.796504	GCACACCATGGAACTTTGTTCAG	60.797	47.826	21.47	1.41	0.00	3.02
3806	8051	3.631686	CACACCATGGAACTTTGTTCAGA	59.368	43.478	21.47	0.00	0.00	3.27
3807	8052	3.885297	ACACCATGGAACTTTGTTCAGAG	59.115	43.478	21.47	1.87	0.00	3.35
3808	8053	2.887152	ACCATGGAACTTTGTTCAGAGC	59.113	45.455	21.47	0.00	0.00	4.09
3809	8054	3.152341	CCATGGAACTTTGTTCAGAGCT	58.848	45.455	5.56	0.00	0.00	4.09
3810	8055	3.571401	CCATGGAACTTTGTTCAGAGCTT	59.429	43.478	5.56	0.00	0.00	3.74
3811	8056	4.038402	CCATGGAACTTTGTTCAGAGCTTT	59.962	41.667	5.56	0.00	0.00	3.51
3812	8057	5.452356	CCATGGAACTTTGTTCAGAGCTTTT	60.452	40.000	5.56	0.00	0.00	2.27
3813	8058	5.248870	TGGAACTTTGTTCAGAGCTTTTC	57.751	39.130	11.75	0.00	0.00	2.29
3814	8059	4.704540	TGGAACTTTGTTCAGAGCTTTTCA	59.295	37.500	11.75	0.00	0.00	2.69
3815	8060	5.360714	TGGAACTTTGTTCAGAGCTTTTCAT	59.639	36.000	11.75	0.00	0.00	2.57
3816	8061	6.545666	TGGAACTTTGTTCAGAGCTTTTCATA	59.454	34.615	11.75	0.00	0.00	2.15
3817	8062	6.858478	GGAACTTTGTTCAGAGCTTTTCATAC	59.142	38.462	11.75	0.00	0.00	2.39
3818	8063	6.942532	ACTTTGTTCAGAGCTTTTCATACA	57.057	33.333	0.00	0.00	0.00	2.29
3819	8064	7.333528	ACTTTGTTCAGAGCTTTTCATACAA	57.666	32.000	0.00	0.00	0.00	2.41
3820	8065	7.771183	ACTTTGTTCAGAGCTTTTCATACAAA	58.229	30.769	0.00	0.00	34.45	2.83
3821	8066	8.416329	ACTTTGTTCAGAGCTTTTCATACAAAT	58.584	29.630	10.88	3.40	34.79	2.32
3822	8067	8.801715	TTTGTTCAGAGCTTTTCATACAAATC	57.198	30.769	0.00	0.00	32.56	2.17
3823	8068	7.750229	TGTTCAGAGCTTTTCATACAAATCT	57.250	32.000	0.00	0.00	0.00	2.40
3824	8069	7.587629	TGTTCAGAGCTTTTCATACAAATCTG	58.412	34.615	0.00	0.00	35.40	2.90
3825	8070	6.748333	TCAGAGCTTTTCATACAAATCTGG	57.252	37.500	0.00	0.00	34.94	3.86
3826	8071	5.649395	TCAGAGCTTTTCATACAAATCTGGG	59.351	40.000	0.00	0.00	34.94	4.45
3827	8072	5.649395	CAGAGCTTTTCATACAAATCTGGGA	59.351	40.000	0.00	0.00	31.47	4.37
3828	8073	6.320672	CAGAGCTTTTCATACAAATCTGGGAT	59.679	38.462	0.00	0.00	31.47	3.85
3829	8074	6.320672	AGAGCTTTTCATACAAATCTGGGATG	59.679	38.462	0.00	0.00	0.00	3.51
3830	8075	5.361857	AGCTTTTCATACAAATCTGGGATGG	59.638	40.000	0.00	0.00	0.00	3.51
3831	8076	5.452356	GCTTTTCATACAAATCTGGGATGGG	60.452	44.000	0.00	0.00	0.00	4.00
3832	8077	5.464588	TTTCATACAAATCTGGGATGGGA	57.535	39.130	0.00	0.00	0.00	4.37
3833	8078	4.437682	TCATACAAATCTGGGATGGGAC	57.562	45.455	0.00	0.00	0.00	4.46
3834	8079	3.141398	CATACAAATCTGGGATGGGACG	58.859	50.000	0.00	0.00	0.00	4.79
3835	8080	0.991920	ACAAATCTGGGATGGGACGT	59.008	50.000	0.00	0.00	0.00	4.34
3836	8081	2.193127	ACAAATCTGGGATGGGACGTA	58.807	47.619	0.00	0.00	0.00	3.57
3837	8082	2.777692	ACAAATCTGGGATGGGACGTAT	59.222	45.455	0.00	0.00	0.00	3.06
3838	8083	3.971305	ACAAATCTGGGATGGGACGTATA	59.029	43.478	0.00	0.00	0.00	1.47
3839	8084	4.597507	ACAAATCTGGGATGGGACGTATAT	59.402	41.667	0.00	0.00	0.00	0.86
3840	8085	5.073144	ACAAATCTGGGATGGGACGTATATT	59.927	40.000	0.00	0.00	0.00	1.28
3841	8086	4.826274	ATCTGGGATGGGACGTATATTG	57.174	45.455	0.00	0.00	0.00	1.90

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
86	89	7.601705	TGGTTTTCTTGATTCCATTCTCTTT	57.398	32.000	0.00	0.00	0.00	2.52
168	174	3.141398	GTCTCATCTTTGTGTTGCTGGA	58.859	45.455	0.00	0.00	0.00	3.86
613	1691	1.089920	GCTGGTCTCGCATTGACAAT	58.910	50.000	0.00	0.00	36.26	2.71
751	1863	0.947244	ACTGCCGCAAAACTGAAGAG	59.053	50.000	0.00	0.00	0.00	2.85
782	1894	0.533978	TCACAGCTGCCGCAAAACTA	60.534	50.000	15.27	0.00	39.10	2.24
829	1947	1.064389	GGCCAAGAAAGCCCATCTACT	60.064	52.381	0.00	0.00	45.16	2.57
911	2060	4.227134	CCGGATCCTCTGCCGTGG	62.227	72.222	10.75	0.00	45.85	4.94
987	2136	2.961768	GGCATGGTGGTTCGGTTG	59.038	61.111	0.00	0.00	0.00	3.77
1375	2524	3.069318	GCGGGAGAGGTCGAGGTT	61.069	66.667	0.00	0.00	0.00	3.50
1719	2868	0.477597	AGGTCAGGTTCCCAATCCCA	60.478	55.000	0.00	0.00	0.00	4.37
1976	3125	1.565759	CCCCAGTGATCTCATTTCCCA	59.434	52.381	0.00	0.00	0.00	4.37
2649	3801	4.019950	CCTGAAATTTTCCCTTCTGGCATT	60.020	41.667	6.68	0.00	34.94	3.56
2819	3971	5.248020	CCTCAATATTCTATCCTCACAGGCT	59.752	44.000	0.00	0.00	34.61	4.58
3000	4153	9.432982	AAGGATGCAAATATACCATAAAAAGGA	57.567	29.630	0.00	0.00	0.00	3.36
3164	4322	6.099990	TGGATACAGGGTATTTACATCCGAAA	59.900	38.462	0.00	0.00	46.17	3.46
3437	4596	6.002082	ACTTTCAAAATGGTACTACCTCCAC	58.998	40.000	6.79	0.00	39.58	4.02
3438	4597	6.183361	TGACTTTCAAAATGGTACTACCTCCA	60.183	38.462	6.79	0.00	39.58	3.86
3484	4643	3.776969	ACATAGAGAGAGAATGGTTGCCA	59.223	43.478	0.00	0.00	38.19	4.92
3560	4719	3.440522	GGTGGAGTTACTTCTCAAATGCC	59.559	47.826	0.00	0.00	36.30	4.40
3717	4876	7.556275	GTGGATAAACAAGAACCTGATTCCATA	59.444	37.037	0.00	0.00	38.16	2.74
3777	8022	1.152798	TTCCATGGTGTGCACTGCA	60.153	52.632	19.41	0.00	35.60	4.41
3778	8023	1.174712	AGTTCCATGGTGTGCACTGC	61.175	55.000	19.41	10.77	0.00	4.40
3791	8036	4.704540	TGAAAAGCTCTGAACAAAGTTCCA	59.295	37.500	7.36	0.00	0.00	3.53
3796	8041	8.807667	ATTTGTATGAAAAGCTCTGAACAAAG	57.192	30.769	13.70	0.00	35.76	2.77
3800	8045	7.025963	CCAGATTTGTATGAAAAGCTCTGAAC	58.974	38.462	0.00	0.00	33.67	3.18
3801	8046	6.151648	CCCAGATTTGTATGAAAAGCTCTGAA	59.848	38.462	0.00	0.00	33.67	3.02
3802	8047	5.649395	CCCAGATTTGTATGAAAAGCTCTGA	59.351	40.000	0.00	0.00	33.67	3.27
3803	8048	5.649395	TCCCAGATTTGTATGAAAAGCTCTG	59.351	40.000	0.00	0.00	33.67	3.35
3804	8049	5.819991	TCCCAGATTTGTATGAAAAGCTCT	58.180	37.500	0.00	0.00	33.67	4.09
3805	8050	6.460676	CCATCCCAGATTTGTATGAAAAGCTC	60.461	42.308	0.00	0.00	33.67	4.09
3806	8051	5.361857	CCATCCCAGATTTGTATGAAAAGCT	59.638	40.000	0.00	0.00	36.24	3.74
3807	8052	5.452356	CCCATCCCAGATTTGTATGAAAAGC	60.452	44.000	0.00	0.00	0.00	3.51
3808	8053	5.893255	TCCCATCCCAGATTTGTATGAAAAG	59.107	40.000	0.00	0.00	0.00	2.27
3809	8054	5.656416	GTCCCATCCCAGATTTGTATGAAAA	59.344	40.000	0.00	0.00	0.00	2.29
3810	8055	5.200483	GTCCCATCCCAGATTTGTATGAAA	58.800	41.667	0.00	0.00	0.00	2.69
3811	8056	4.685848	CGTCCCATCCCAGATTTGTATGAA	60.686	45.833	0.00	0.00	0.00	2.57
3812	8057	3.181455	CGTCCCATCCCAGATTTGTATGA	60.181	47.826	0.00	0.00	0.00	2.15
3813	8058	3.141398	CGTCCCATCCCAGATTTGTATG	58.859	50.000	0.00	0.00	0.00	2.39
3814	8059	2.777692	ACGTCCCATCCCAGATTTGTAT	59.222	45.455	0.00	0.00	0.00	2.29
3815	8060	2.193127	ACGTCCCATCCCAGATTTGTA	58.807	47.619	0.00	0.00	0.00	2.41
3816	8061	0.991920	ACGTCCCATCCCAGATTTGT	59.008	50.000	0.00	0.00	0.00	2.83
3817	8062	3.492102	ATACGTCCCATCCCAGATTTG	57.508	47.619	0.00	0.00	0.00	2.32
3818	8063	5.560724	CAATATACGTCCCATCCCAGATTT	58.439	41.667	0.00	0.00	0.00	2.17
3819	8064	5.165961	CAATATACGTCCCATCCCAGATT	57.834	43.478	0.00	0.00	0.00	2.40
3820	8065	4.826274	CAATATACGTCCCATCCCAGAT	57.174	45.455	0.00	0.00	0.00	2.90

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.