Multiple sequence alignment - TraesCS6D01G196600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G196600 chr6D 100.000 5993 0 0 1 5993 272863704 272857712 0.000000e+00 11068.0
1 TraesCS6D01G196600 chr6D 86.041 437 32 13 2804 3216 301725714 301726145 5.510000e-120 442.0
2 TraesCS6D01G196600 chr6D 93.478 92 3 2 5161 5250 272858496 272858406 3.770000e-27 134.0
3 TraesCS6D01G196600 chr6D 93.478 92 3 2 5209 5299 272858544 272858455 3.770000e-27 134.0
4 TraesCS6D01G196600 chr6D 95.455 44 1 1 5161 5203 272858449 272858406 1.080000e-07 69.4
5 TraesCS6D01G196600 chr6D 95.455 44 1 1 5256 5299 272858544 272858502 1.080000e-07 69.4
6 TraesCS6D01G196600 chr6B 95.575 4384 128 25 4 4340 434303681 434299317 0.000000e+00 6961.0
7 TraesCS6D01G196600 chr6B 94.304 790 25 11 4474 5250 434299312 434298530 0.000000e+00 1192.0
8 TraesCS6D01G196600 chr6B 89.196 398 21 11 5220 5603 434298609 434298220 1.510000e-130 477.0
9 TraesCS6D01G196600 chr6B 97.744 133 3 0 4348 4480 34047915 34048047 4.670000e-56 230.0
10 TraesCS6D01G196600 chr6B 100.000 38 0 0 5262 5299 434298616 434298579 3.000000e-08 71.3
11 TraesCS6D01G196600 chr6A 95.331 4391 143 23 1 4340 389959700 389955321 0.000000e+00 6916.0
12 TraesCS6D01G196600 chr6A 94.423 789 25 10 4474 5250 389955316 389954535 0.000000e+00 1195.0
13 TraesCS6D01G196600 chr6A 91.206 398 14 10 5220 5603 389954613 389954223 6.880000e-144 521.0
14 TraesCS6D01G196600 chr6A 97.101 138 4 0 4344 4481 32749055 32749192 3.610000e-57 233.0
15 TraesCS6D01G196600 chr6A 100.000 38 0 0 5262 5299 389954620 389954583 3.000000e-08 71.3
16 TraesCS6D01G196600 chr3A 85.145 2733 298 61 828 3486 96250124 96247426 0.000000e+00 2699.0
17 TraesCS6D01G196600 chr3A 88.239 1607 144 23 1249 2843 56668613 56670186 0.000000e+00 1879.0
18 TraesCS6D01G196600 chr3A 86.676 728 57 13 4474 5181 56675503 56676210 0.000000e+00 771.0
19 TraesCS6D01G196600 chr3A 86.018 658 53 14 4477 5116 96242655 96242019 0.000000e+00 669.0
20 TraesCS6D01G196600 chr3A 90.126 476 35 6 3868 4340 96243129 96242663 5.140000e-170 608.0
21 TraesCS6D01G196600 chr3A 90.591 457 26 5 3887 4340 56675056 56675498 1.860000e-164 590.0
22 TraesCS6D01G196600 chr3A 80.198 505 61 25 3487 3972 56670820 56671304 5.750000e-90 342.0
23 TraesCS6D01G196600 chr3A 81.089 349 29 24 5271 5603 96241971 96241644 1.670000e-60 244.0
24 TraesCS6D01G196600 chr3B 84.832 2736 293 64 828 3486 127936112 127933422 0.000000e+00 2641.0
25 TraesCS6D01G196600 chr3B 87.598 1911 185 29 830 2717 69811375 69813256 0.000000e+00 2169.0
26 TraesCS6D01G196600 chr3B 87.166 748 47 24 4474 5195 69817649 69818373 0.000000e+00 804.0
27 TraesCS6D01G196600 chr3B 85.152 660 55 21 4477 5115 127930111 127929474 2.360000e-178 636.0
28 TraesCS6D01G196600 chr3B 90.546 476 34 6 3868 4340 127930586 127930119 2.370000e-173 619.0
29 TraesCS6D01G196600 chr3B 89.371 461 31 7 3887 4344 69817202 69817647 1.130000e-156 564.0
30 TraesCS6D01G196600 chr3B 81.504 492 51 17 3501 3972 69814022 69814493 9.490000e-98 368.0
31 TraesCS6D01G196600 chr3B 82.022 356 23 19 5268 5601 127929418 127929082 1.280000e-66 265.0
32 TraesCS6D01G196600 chr3D 84.824 2728 298 60 828 3486 81720947 81718267 0.000000e+00 2638.0
33 TraesCS6D01G196600 chr3D 84.461 2748 295 62 830 3486 44882107 44884813 0.000000e+00 2588.0
34 TraesCS6D01G196600 chr3D 86.248 749 51 16 4474 5200 44888299 44889017 0.000000e+00 765.0
35 TraesCS6D01G196600 chr3D 85.540 657 59 20 4477 5115 81715052 81714414 0.000000e+00 654.0
36 TraesCS6D01G196600 chr3D 90.336 476 35 5 3868 4340 81715527 81715060 1.100000e-171 614.0
37 TraesCS6D01G196600 chr3D 90.153 457 28 5 3887 4340 44887852 44888294 4.030000e-161 579.0
38 TraesCS6D01G196600 chr3D 80.000 505 62 17 3487 3972 44884723 44885207 2.680000e-88 337.0
39 TraesCS6D01G196600 chr3D 81.690 355 25 23 5269 5601 81714364 81714028 5.960000e-65 259.0
40 TraesCS6D01G196600 chr3D 96.875 32 1 0 5219 5250 81714365 81714334 3.000000e-03 54.7
41 TraesCS6D01G196600 chr7D 84.055 508 59 17 835 1341 46890976 46891462 2.530000e-128 470.0
42 TraesCS6D01G196600 chr7D 86.755 302 30 2 1348 1649 46893215 46893506 1.610000e-85 327.0
43 TraesCS6D01G196600 chr7D 99.242 132 1 0 4350 4481 251036051 251035920 7.760000e-59 239.0
44 TraesCS6D01G196600 chr4A 85.683 454 44 13 3791 4235 706471968 706471527 5.470000e-125 459.0
45 TraesCS6D01G196600 chr4A 84.687 431 37 10 4491 4918 706471531 706471127 2.600000e-108 403.0
46 TraesCS6D01G196600 chr4A 77.796 626 70 25 2786 3369 706494079 706493481 7.490000e-84 322.0
47 TraesCS6D01G196600 chr4A 94.444 144 6 2 4335 4477 736061064 736061206 2.810000e-53 220.0
48 TraesCS6D01G196600 chr4A 88.690 168 14 5 3629 3793 706478335 706478170 3.660000e-47 200.0
49 TraesCS6D01G196600 chr7B 82.460 439 48 20 2804 3224 18958580 18958153 2.050000e-94 357.0
50 TraesCS6D01G196600 chr7B 90.476 231 22 0 5763 5993 680209672 680209902 7.550000e-79 305.0
51 TraesCS6D01G196600 chr7B 90.129 233 23 0 5761 5993 474288766 474288534 2.710000e-78 303.0
52 TraesCS6D01G196600 chr7B 93.919 148 5 4 4350 4496 372835109 372834965 2.810000e-53 220.0
53 TraesCS6D01G196600 chr1A 93.133 233 16 0 5761 5993 545755482 545755250 5.750000e-90 342.0
54 TraesCS6D01G196600 chr5A 92.641 231 17 0 5763 5993 374886160 374885930 3.460000e-87 333.0
55 TraesCS6D01G196600 chr5A 90.909 231 20 1 5763 5993 40613910 40613681 5.830000e-80 309.0
56 TraesCS6D01G196600 chr4B 91.342 231 20 0 5763 5993 37726673 37726443 3.490000e-82 316.0
57 TraesCS6D01G196600 chr1B 90.558 233 22 0 5761 5993 563068014 563068246 5.830000e-80 309.0
58 TraesCS6D01G196600 chr5B 90.517 232 21 1 5763 5993 31903165 31903396 7.550000e-79 305.0
59 TraesCS6D01G196600 chr2B 90.129 233 23 0 5761 5993 135771068 135770836 2.710000e-78 303.0
60 TraesCS6D01G196600 chr2B 86.567 67 7 2 4432 4497 129659812 129659747 8.330000e-09 73.1
61 TraesCS6D01G196600 chr7A 88.210 229 11 4 1813 2041 23791393 23791605 5.960000e-65 259.0
62 TraesCS6D01G196600 chr7A 95.105 143 6 1 4339 4481 610452973 610452832 2.170000e-54 224.0
63 TraesCS6D01G196600 chr2D 98.507 134 2 0 4344 4477 340252735 340252868 2.790000e-58 237.0
64 TraesCS6D01G196600 chr1D 96.377 138 5 0 4350 4487 43298887 43298750 1.680000e-55 228.0
65 TraesCS6D01G196600 chr2A 95.714 140 5 1 4341 4480 413337997 413337859 2.170000e-54 224.0
66 TraesCS6D01G196600 chr2A 86.275 153 16 2 4349 4496 149907559 149907711 1.730000e-35 161.0
67 TraesCS6D01G196600 chr2A 84.967 153 15 8 4347 4495 735403299 735403151 1.350000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G196600 chr6D 272857712 272863704 5992 True 11068.000 11068 100.000000 1 5993 1 chr6D.!!$R1 5992
1 TraesCS6D01G196600 chr6B 434298220 434303681 5461 True 2175.325 6961 94.768750 4 5603 4 chr6B.!!$R1 5599
2 TraesCS6D01G196600 chr6A 389954223 389959700 5477 True 2175.825 6916 95.240000 1 5603 4 chr6A.!!$R1 5602
3 TraesCS6D01G196600 chr3A 96247426 96250124 2698 True 2699.000 2699 85.145000 828 3486 1 chr3A.!!$R1 2658
4 TraesCS6D01G196600 chr3A 56668613 56676210 7597 False 895.500 1879 86.426000 1249 5181 4 chr3A.!!$F1 3932
5 TraesCS6D01G196600 chr3A 96241644 96243129 1485 True 507.000 669 85.744333 3868 5603 3 chr3A.!!$R2 1735
6 TraesCS6D01G196600 chr3B 127929082 127936112 7030 True 1040.250 2641 85.638000 828 5601 4 chr3B.!!$R1 4773
7 TraesCS6D01G196600 chr3B 69811375 69818373 6998 False 976.250 2169 86.409750 830 5195 4 chr3B.!!$F1 4365
8 TraesCS6D01G196600 chr3D 44882107 44889017 6910 False 1067.250 2588 85.215500 830 5200 4 chr3D.!!$F1 4370
9 TraesCS6D01G196600 chr3D 81714028 81720947 6919 True 843.940 2638 87.853000 828 5601 5 chr3D.!!$R1 4773
10 TraesCS6D01G196600 chr7D 46890976 46893506 2530 False 398.500 470 85.405000 835 1649 2 chr7D.!!$F1 814
11 TraesCS6D01G196600 chr4A 706471127 706471968 841 True 431.000 459 85.185000 3791 4918 2 chr4A.!!$R3 1127
12 TraesCS6D01G196600 chr4A 706493481 706494079 598 True 322.000 322 77.796000 2786 3369 1 chr4A.!!$R2 583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.172578 CCCACGATACAGCGTCAGAA 59.827 55.000 0.00 0.0 43.59 3.02 F
431 440 1.068541 GTCGCTTCGGCAAGGAAAAAT 60.069 47.619 0.00 0.0 41.88 1.82 F
620 631 1.841556 ACCAAGGGAGAAGGACGCA 60.842 57.895 0.00 0.0 0.00 5.24 F
1884 3670 1.873591 GACCGCAGTGACTTGTCAATT 59.126 47.619 4.93 0.0 0.00 2.32 F
2955 4870 0.540365 ATGTGGTGCAAGGGTTGAGG 60.540 55.000 0.00 0.0 0.00 3.86 F
2958 4873 0.754957 TGGTGCAAGGGTTGAGGTTG 60.755 55.000 0.00 0.0 0.00 3.77 F
4367 11469 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1151 1191 1.284297 GATGCACTTGCGTTTTGGCC 61.284 55.000 0.00 0.00 45.83 5.36 R
2305 4106 1.066002 CACCACCTGAGTGCACAAAAG 59.934 52.381 21.04 12.64 43.09 2.27 R
2547 4353 9.482627 GGAAATATAGAGATGGTCAAAGTAGTG 57.517 37.037 0.00 0.00 0.00 2.74 R
3266 5232 0.696501 ACTGGCGGGTTTAATCCTGT 59.303 50.000 12.11 0.80 36.33 4.00 R
4217 11319 0.037882 TCAGAAAGAGGTGCAGCGAG 60.038 55.000 10.78 0.00 0.00 5.03 R
4347 11449 0.115745 TTGGGACGGAGGGAGTACTT 59.884 55.000 0.00 0.00 0.00 2.24 R
5971 13141 0.111253 CCTTTCCAGGAAGCAGGTGT 59.889 55.000 10.85 0.00 44.19 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.601314 CAGAAATTATCGAACCGCACGA 59.399 45.455 0.00 0.00 43.65 4.35
35 36 2.385091 CCGCACGAAAACCTACCCG 61.385 63.158 0.00 0.00 0.00 5.28
39 40 2.620242 GCACGAAAACCTACCCGAATA 58.380 47.619 0.00 0.00 0.00 1.75
57 58 1.920734 TACAATGACATGCGGGCCCT 61.921 55.000 22.43 0.00 0.00 5.19
60 61 0.466189 AATGACATGCGGGCCCTAAG 60.466 55.000 22.43 9.59 0.00 2.18
90 91 0.172578 CCCACGATACAGCGTCAGAA 59.827 55.000 0.00 0.00 43.59 3.02
91 92 1.550065 CCACGATACAGCGTCAGAAG 58.450 55.000 0.00 0.00 43.59 2.85
111 112 2.802667 CGCGCGATCCTTGTCCAAG 61.803 63.158 28.94 0.00 38.14 3.61
431 440 1.068541 GTCGCTTCGGCAAGGAAAAAT 60.069 47.619 0.00 0.00 41.88 1.82
475 486 2.202810 GGCGCGAGGAAAGGAGAG 60.203 66.667 12.10 0.00 0.00 3.20
620 631 1.841556 ACCAAGGGAGAAGGACGCA 60.842 57.895 0.00 0.00 0.00 5.24
636 647 2.821685 CATCGCTCCGGAATCCCA 59.178 61.111 5.23 0.00 0.00 4.37
901 915 5.575157 TGTGTGCTTCCATTTAAATCCCTA 58.425 37.500 0.00 0.00 0.00 3.53
954 987 2.863740 CGTGTGTGTCTGAAGCTGTTTA 59.136 45.455 0.00 0.00 0.00 2.01
958 991 5.180117 GTGTGTGTCTGAAGCTGTTTATCAT 59.820 40.000 0.00 0.00 0.00 2.45
1131 1171 3.050275 GGCAGCCCTGTTCGTGTC 61.050 66.667 0.00 0.00 0.00 3.67
1884 3670 1.873591 GACCGCAGTGACTTGTCAATT 59.126 47.619 4.93 0.00 0.00 2.32
2157 3946 6.405538 AGAGAGAGATAACCAGCAGAAAAAG 58.594 40.000 0.00 0.00 0.00 2.27
2235 4033 6.295575 CCACAAATCCCTGCAAAGGTATTTTA 60.296 38.462 2.51 0.00 0.00 1.52
2305 4106 2.284190 GCACTTGCTAGAGATTGACCC 58.716 52.381 1.04 0.00 38.21 4.46
2547 4353 2.085320 TCTCTTCGTGCCACTACTCTC 58.915 52.381 0.00 0.00 0.00 3.20
2659 4485 3.430895 TGGCTAAACGTCGTTGAAATCTC 59.569 43.478 12.12 0.00 0.00 2.75
2781 4620 4.508861 ACATGTGCTGCAAATTTGTTCTTC 59.491 37.500 19.03 8.48 0.00 2.87
2950 4865 1.635487 ACTGATATGTGGTGCAAGGGT 59.365 47.619 0.00 0.00 0.00 4.34
2952 4867 2.424601 CTGATATGTGGTGCAAGGGTTG 59.575 50.000 0.00 0.00 0.00 3.77
2954 4869 2.198827 TATGTGGTGCAAGGGTTGAG 57.801 50.000 0.00 0.00 0.00 3.02
2955 4870 0.540365 ATGTGGTGCAAGGGTTGAGG 60.540 55.000 0.00 0.00 0.00 3.86
2956 4871 1.152756 GTGGTGCAAGGGTTGAGGT 60.153 57.895 0.00 0.00 0.00 3.85
2957 4872 0.755327 GTGGTGCAAGGGTTGAGGTT 60.755 55.000 0.00 0.00 0.00 3.50
2958 4873 0.754957 TGGTGCAAGGGTTGAGGTTG 60.755 55.000 0.00 0.00 0.00 3.77
2972 4904 6.095377 GGTTGAGGTTGATAGATGCTTTTTG 58.905 40.000 0.00 0.00 0.00 2.44
3053 4995 5.014858 CCAGTTGTCTACAAGACCCTACTA 58.985 45.833 4.69 0.00 44.44 1.82
3103 5050 8.164733 TCTAGTCCTCAGATCGTATTTCCTATT 58.835 37.037 0.00 0.00 0.00 1.73
3150 5097 3.393089 AGTGACACTGAAAGCGAATCT 57.607 42.857 7.47 0.00 37.60 2.40
3327 5296 4.863491 ACATTCATCCATTATTCGCTTGC 58.137 39.130 0.00 0.00 0.00 4.01
3661 5648 5.237815 TCTACTAATGTTGTGGCAAGAGTG 58.762 41.667 0.00 0.00 0.00 3.51
3670 5657 5.105554 TGTTGTGGCAAGAGTGTATTGTTTT 60.106 36.000 0.00 0.00 0.00 2.43
3671 5658 4.930963 TGTGGCAAGAGTGTATTGTTTTG 58.069 39.130 0.00 0.00 0.00 2.44
3687 5674 2.791383 TTTGTTTCCATTGACTGGCG 57.209 45.000 0.00 0.00 45.52 5.69
3735 5722 5.053145 TGCGTTGCAATAATTGGTTTCTTT 58.947 33.333 0.59 0.00 34.76 2.52
3736 5723 5.050499 TGCGTTGCAATAATTGGTTTCTTTG 60.050 36.000 0.59 0.00 34.76 2.77
3819 5812 3.617263 CCTGTTGATGCTAACCGTAAGTC 59.383 47.826 0.00 0.00 0.00 3.01
3831 5824 4.417426 ACCGTAAGTCTTATCCCCAATG 57.583 45.455 0.00 0.00 0.00 2.82
3879 10978 8.826710 CGGAATCTGCTTTTATTTGTCATACTA 58.173 33.333 0.00 0.00 0.00 1.82
3958 11059 1.272313 ACAATGAGTCCAAGGCTGCAT 60.272 47.619 0.50 0.00 0.00 3.96
4002 11103 4.785346 AAGCAGGTTCATATGAGACCAT 57.215 40.909 25.73 15.37 36.81 3.55
4187 11289 2.134630 CTCAGCCAGGTTTGGGAGCT 62.135 60.000 0.00 0.00 45.16 4.09
4198 11300 5.011023 CAGGTTTGGGAGCTTTTTACATCTT 59.989 40.000 0.00 0.00 32.70 2.40
4217 11319 7.597386 ACATCTTGCTTTCTTTCCTTCATTAC 58.403 34.615 0.00 0.00 0.00 1.89
4340 11442 7.161773 AGCATATACATCTGTTTGTTTGCTT 57.838 32.000 0.00 0.00 36.53 3.91
4341 11443 7.031372 AGCATATACATCTGTTTGTTTGCTTG 58.969 34.615 0.00 0.00 36.53 4.01
4343 11445 3.806625 ACATCTGTTTGTTTGCTTGCT 57.193 38.095 0.00 0.00 0.00 3.91
4344 11446 3.450578 ACATCTGTTTGTTTGCTTGCTG 58.549 40.909 0.00 0.00 0.00 4.41
4345 11447 1.925229 TCTGTTTGTTTGCTTGCTGC 58.075 45.000 0.00 0.00 43.25 5.25
4346 11448 0.932399 CTGTTTGTTTGCTTGCTGCC 59.068 50.000 0.00 0.00 42.00 4.85
4347 11449 0.248565 TGTTTGTTTGCTTGCTGCCA 59.751 45.000 0.00 0.00 42.00 4.92
4348 11450 1.338484 TGTTTGTTTGCTTGCTGCCAA 60.338 42.857 0.00 0.00 42.00 4.52
4356 11458 2.859992 CTTGCTGCCAAGTACTCCC 58.140 57.895 0.00 0.00 42.76 4.30
4357 11459 0.326264 CTTGCTGCCAAGTACTCCCT 59.674 55.000 0.00 0.00 42.76 4.20
4358 11460 0.324943 TTGCTGCCAAGTACTCCCTC 59.675 55.000 0.00 0.00 0.00 4.30
4359 11461 1.222113 GCTGCCAAGTACTCCCTCC 59.778 63.158 0.00 0.00 0.00 4.30
4360 11462 1.517832 CTGCCAAGTACTCCCTCCG 59.482 63.158 0.00 0.00 0.00 4.63
4361 11463 1.229082 TGCCAAGTACTCCCTCCGT 60.229 57.895 0.00 0.00 0.00 4.69
4362 11464 1.255667 TGCCAAGTACTCCCTCCGTC 61.256 60.000 0.00 0.00 0.00 4.79
4363 11465 1.957765 GCCAAGTACTCCCTCCGTCC 61.958 65.000 0.00 0.00 0.00 4.79
4364 11466 1.328430 CCAAGTACTCCCTCCGTCCC 61.328 65.000 0.00 0.00 0.00 4.46
4365 11467 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
4366 11468 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
4367 11469 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4368 11470 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4369 11471 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4370 11472 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4371 11473 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4372 11474 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4373 11475 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4374 11476 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4375 11477 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4376 11478 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4377 11479 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4378 11480 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4379 11481 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4380 11482 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4381 11483 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4382 11484 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4383 11485 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4384 11486 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4385 11487 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4386 11488 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4387 11489 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4388 11490 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4420 11522 9.740239 TGGATGTATCTAATACTAAAACGTGAC 57.260 33.333 0.00 0.00 36.70 3.67
4421 11523 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
4431 11533 9.871238 AATACTAAAACGTGACTTGATACATCT 57.129 29.630 0.00 0.00 0.00 2.90
4432 11534 7.582435 ACTAAAACGTGACTTGATACATCTG 57.418 36.000 0.00 0.00 0.00 2.90
4433 11535 7.152645 ACTAAAACGTGACTTGATACATCTGT 58.847 34.615 0.00 0.00 0.00 3.41
4434 11536 8.301720 ACTAAAACGTGACTTGATACATCTGTA 58.698 33.333 0.00 0.00 34.67 2.74
4435 11537 9.302345 CTAAAACGTGACTTGATACATCTGTAT 57.698 33.333 2.53 2.53 43.38 2.29
4436 11538 8.547967 AAAACGTGACTTGATACATCTGTATT 57.452 30.769 4.44 0.00 40.99 1.89
4437 11539 8.547967 AAACGTGACTTGATACATCTGTATTT 57.452 30.769 4.44 0.00 40.99 1.40
4438 11540 9.647797 AAACGTGACTTGATACATCTGTATTTA 57.352 29.630 4.44 0.00 40.99 1.40
4439 11541 8.858003 ACGTGACTTGATACATCTGTATTTAG 57.142 34.615 4.44 7.42 40.99 1.85
4440 11542 8.683615 ACGTGACTTGATACATCTGTATTTAGA 58.316 33.333 14.44 0.00 40.99 2.10
4441 11543 8.959058 CGTGACTTGATACATCTGTATTTAGAC 58.041 37.037 14.44 10.85 40.99 2.59
4442 11544 9.803315 GTGACTTGATACATCTGTATTTAGACA 57.197 33.333 14.44 12.43 40.99 3.41
4464 11566 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4465 11567 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4466 11568 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
4467 11569 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4468 11570 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4469 11571 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4470 11572 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4471 11573 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4472 11574 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4676 11781 2.967740 GCATTTGCTGGTGCTATGC 58.032 52.632 10.79 10.79 44.08 3.14
4685 11790 1.068281 CTGGTGCTATGCGACTCATCT 59.932 52.381 0.00 0.00 36.63 2.90
4686 11791 1.482182 TGGTGCTATGCGACTCATCTT 59.518 47.619 0.00 0.00 36.63 2.40
4687 11792 2.093500 TGGTGCTATGCGACTCATCTTT 60.093 45.455 0.00 0.00 36.63 2.52
4688 11793 2.939103 GGTGCTATGCGACTCATCTTTT 59.061 45.455 0.00 0.00 36.63 2.27
4989 12104 5.600484 AGATGTGGAGGAAGTAGAAATCGAT 59.400 40.000 0.00 0.00 0.00 3.59
4998 12113 9.187455 GAGGAAGTAGAAATCGATTAATGTCTC 57.813 37.037 11.83 4.09 0.00 3.36
5020 12137 1.699083 TGACATGTTGGAGCCTTCTCA 59.301 47.619 0.00 0.00 41.13 3.27
5039 12156 5.783111 TCTCATCAAAGACAGAACAATCGA 58.217 37.500 0.00 0.00 0.00 3.59
5040 12157 6.401394 TCTCATCAAAGACAGAACAATCGAT 58.599 36.000 0.00 0.00 0.00 3.59
5041 12158 6.312180 TCTCATCAAAGACAGAACAATCGATG 59.688 38.462 0.00 0.00 0.00 3.84
5042 12159 5.934043 TCATCAAAGACAGAACAATCGATGT 59.066 36.000 0.00 0.00 46.82 3.06
5043 12160 5.596268 TCAAAGACAGAACAATCGATGTG 57.404 39.130 0.00 2.30 42.99 3.21
5047 12177 6.653273 AAGACAGAACAATCGATGTGTATG 57.347 37.500 0.00 10.41 42.99 2.39
5050 12188 4.081142 ACAGAACAATCGATGTGTATGGGA 60.081 41.667 0.00 0.00 42.99 4.37
5190 12336 3.162147 TGGAAGGGAGGATAGAGATCG 57.838 52.381 0.00 0.00 32.28 3.69
5191 12337 2.716969 TGGAAGGGAGGATAGAGATCGA 59.283 50.000 0.00 0.00 32.28 3.59
5192 12338 3.245087 TGGAAGGGAGGATAGAGATCGAG 60.245 52.174 0.00 0.00 32.28 4.04
5193 12339 3.352648 GAAGGGAGGATAGAGATCGAGG 58.647 54.545 0.00 0.00 32.28 4.63
5194 12340 1.005450 AGGGAGGATAGAGATCGAGGC 59.995 57.143 0.00 0.00 32.28 4.70
5195 12341 1.272203 GGGAGGATAGAGATCGAGGCA 60.272 57.143 0.00 0.00 32.28 4.75
5196 12342 2.520069 GGAGGATAGAGATCGAGGCAA 58.480 52.381 0.00 0.00 32.28 4.52
5197 12343 2.230266 GGAGGATAGAGATCGAGGCAAC 59.770 54.545 0.00 0.00 32.28 4.17
5198 12344 2.230266 GAGGATAGAGATCGAGGCAACC 59.770 54.545 0.00 0.00 32.28 3.77
5199 12345 1.964223 GGATAGAGATCGAGGCAACCA 59.036 52.381 0.00 0.00 32.28 3.67
5200 12346 2.564947 GGATAGAGATCGAGGCAACCAT 59.435 50.000 0.00 0.00 32.28 3.55
5201 12347 3.583806 GATAGAGATCGAGGCAACCATG 58.416 50.000 0.00 0.00 37.17 3.66
5202 12348 1.198713 AGAGATCGAGGCAACCATGT 58.801 50.000 0.00 0.00 37.17 3.21
5203 12349 1.556911 AGAGATCGAGGCAACCATGTT 59.443 47.619 0.00 0.00 37.17 2.71
5204 12350 2.026822 AGAGATCGAGGCAACCATGTTT 60.027 45.455 0.00 0.00 37.17 2.83
5205 12351 2.749621 GAGATCGAGGCAACCATGTTTT 59.250 45.455 0.00 0.00 37.17 2.43
5206 12352 2.749621 AGATCGAGGCAACCATGTTTTC 59.250 45.455 0.00 0.00 37.17 2.29
5207 12353 1.243902 TCGAGGCAACCATGTTTTCC 58.756 50.000 0.00 0.00 37.17 3.13
5208 12354 1.202879 TCGAGGCAACCATGTTTTCCT 60.203 47.619 0.00 0.00 37.17 3.36
5209 12355 1.068333 CGAGGCAACCATGTTTTCCTG 60.068 52.381 0.00 0.00 37.17 3.86
5210 12356 0.681175 AGGCAACCATGTTTTCCTGC 59.319 50.000 0.00 0.00 37.17 4.85
5211 12357 0.392336 GGCAACCATGTTTTCCTGCA 59.608 50.000 0.00 0.00 0.00 4.41
5212 12358 1.501169 GCAACCATGTTTTCCTGCAC 58.499 50.000 0.00 0.00 0.00 4.57
5213 12359 1.769733 CAACCATGTTTTCCTGCACG 58.230 50.000 0.00 0.00 0.00 5.34
5214 12360 0.673437 AACCATGTTTTCCTGCACGG 59.327 50.000 0.00 0.00 0.00 4.94
5215 12361 1.080569 CCATGTTTTCCTGCACGGC 60.081 57.895 0.00 0.00 0.00 5.68
5216 12362 1.080569 CATGTTTTCCTGCACGGCC 60.081 57.895 0.00 0.00 0.00 6.13
5217 12363 2.275380 ATGTTTTCCTGCACGGCCC 61.275 57.895 0.00 0.00 0.00 5.80
5218 12364 2.597510 GTTTTCCTGCACGGCCCT 60.598 61.111 0.00 0.00 0.00 5.19
5219 12365 2.597217 TTTTCCTGCACGGCCCTG 60.597 61.111 0.00 0.00 0.00 4.45
5220 12366 3.126703 TTTTCCTGCACGGCCCTGA 62.127 57.895 5.85 0.00 0.00 3.86
5221 12367 2.632602 TTTTCCTGCACGGCCCTGAA 62.633 55.000 5.85 0.00 0.00 3.02
5222 12368 3.551496 TTCCTGCACGGCCCTGAAG 62.551 63.158 5.85 4.23 0.00 3.02
5251 12397 0.620556 AGATCGAGGCCACCATGTTT 59.379 50.000 5.01 0.00 0.00 2.83
5360 12509 0.108804 TTGTCCCAGAATCGAGACGC 60.109 55.000 0.00 0.00 31.75 5.19
5361 12510 1.586564 GTCCCAGAATCGAGACGCG 60.587 63.158 3.53 3.53 42.69 6.01
5362 12511 2.278857 CCCAGAATCGAGACGCGG 60.279 66.667 12.47 0.00 41.33 6.46
5398 12547 7.557724 TGTTGTCGGGTGTATTAATCTGATAA 58.442 34.615 0.00 0.00 0.00 1.75
5401 12550 8.657074 TGTCGGGTGTATTAATCTGATAAAAG 57.343 34.615 0.00 0.00 0.00 2.27
5402 12551 7.225931 TGTCGGGTGTATTAATCTGATAAAAGC 59.774 37.037 0.00 0.00 0.00 3.51
5403 12552 6.708949 TCGGGTGTATTAATCTGATAAAAGCC 59.291 38.462 0.00 0.00 0.00 4.35
5404 12553 6.072673 CGGGTGTATTAATCTGATAAAAGCCC 60.073 42.308 0.00 0.00 0.00 5.19
5405 12554 7.004691 GGGTGTATTAATCTGATAAAAGCCCT 58.995 38.462 0.00 0.00 0.00 5.19
5406 12555 7.040409 GGGTGTATTAATCTGATAAAAGCCCTG 60.040 40.741 0.00 0.00 0.00 4.45
5407 12556 7.040409 GGTGTATTAATCTGATAAAAGCCCTGG 60.040 40.741 0.00 0.00 0.00 4.45
5410 12574 9.131791 GTATTAATCTGATAAAAGCCCTGGAAA 57.868 33.333 0.00 0.00 0.00 3.13
5415 12579 6.122277 TCTGATAAAAGCCCTGGAAATACAG 58.878 40.000 0.00 0.00 38.21 2.74
5445 12609 2.022129 GGTTCCGTCACACTGCTCG 61.022 63.158 0.00 0.00 0.00 5.03
5451 12615 3.695606 TCACACTGCTCGCCTCCC 61.696 66.667 0.00 0.00 0.00 4.30
5499 12663 1.369625 CCCTAGCGGCTAGTTGTTTG 58.630 55.000 29.55 16.23 32.62 2.93
5518 12682 4.743057 TTGCTCAGCATAGCTTCTCTTA 57.257 40.909 0.00 0.00 43.19 2.10
5603 12773 3.803368 GCTTTAGTTGTTTGCTGGGCATT 60.803 43.478 0.00 0.00 38.76 3.56
5604 12774 4.379652 CTTTAGTTGTTTGCTGGGCATTT 58.620 39.130 0.00 0.00 38.76 2.32
5605 12775 4.414337 TTAGTTGTTTGCTGGGCATTTT 57.586 36.364 0.00 0.00 38.76 1.82
5606 12776 2.563702 AGTTGTTTGCTGGGCATTTTG 58.436 42.857 0.00 0.00 38.76 2.44
5607 12777 2.093021 AGTTGTTTGCTGGGCATTTTGT 60.093 40.909 0.00 0.00 38.76 2.83
5608 12778 3.133721 AGTTGTTTGCTGGGCATTTTGTA 59.866 39.130 0.00 0.00 38.76 2.41
5609 12779 3.827008 TGTTTGCTGGGCATTTTGTAA 57.173 38.095 0.00 0.00 38.76 2.41
5610 12780 3.462021 TGTTTGCTGGGCATTTTGTAAC 58.538 40.909 0.00 0.00 38.76 2.50
5611 12781 3.118629 TGTTTGCTGGGCATTTTGTAACA 60.119 39.130 0.00 0.00 38.76 2.41
5612 12782 3.383620 TTGCTGGGCATTTTGTAACAG 57.616 42.857 0.00 0.00 38.76 3.16
5613 12783 1.617850 TGCTGGGCATTTTGTAACAGG 59.382 47.619 0.00 0.00 31.71 4.00
5614 12784 1.892474 GCTGGGCATTTTGTAACAGGA 59.108 47.619 0.00 0.00 0.00 3.86
5615 12785 2.298729 GCTGGGCATTTTGTAACAGGAA 59.701 45.455 0.00 0.00 0.00 3.36
5616 12786 3.244044 GCTGGGCATTTTGTAACAGGAAA 60.244 43.478 0.00 0.00 0.00 3.13
5617 12787 4.742138 GCTGGGCATTTTGTAACAGGAAAA 60.742 41.667 0.00 0.00 0.00 2.29
5618 12788 5.359194 TGGGCATTTTGTAACAGGAAAAA 57.641 34.783 0.00 0.00 0.00 1.94
5619 12789 5.119694 TGGGCATTTTGTAACAGGAAAAAC 58.880 37.500 0.00 0.00 0.00 2.43
5620 12790 4.210328 GGGCATTTTGTAACAGGAAAAACG 59.790 41.667 0.00 0.00 0.00 3.60
5621 12791 4.806775 GGCATTTTGTAACAGGAAAAACGT 59.193 37.500 0.00 0.00 0.00 3.99
5622 12792 5.276631 GGCATTTTGTAACAGGAAAAACGTG 60.277 40.000 0.00 0.00 39.84 4.49
5624 12794 6.691442 CATTTTGTAACAGGAAAAACGTGTG 58.309 36.000 0.00 0.00 45.10 3.82
5625 12795 4.358494 TTGTAACAGGAAAAACGTGTGG 57.642 40.909 0.00 0.00 45.10 4.17
5626 12796 3.607741 TGTAACAGGAAAAACGTGTGGA 58.392 40.909 0.00 0.00 45.10 4.02
5627 12797 4.008330 TGTAACAGGAAAAACGTGTGGAA 58.992 39.130 0.00 0.00 45.10 3.53
5628 12798 4.458295 TGTAACAGGAAAAACGTGTGGAAA 59.542 37.500 0.00 0.00 45.10 3.13
5629 12799 4.729227 AACAGGAAAAACGTGTGGAAAT 57.271 36.364 0.00 0.00 45.10 2.17
5630 12800 4.040445 ACAGGAAAAACGTGTGGAAATG 57.960 40.909 0.00 0.00 44.34 2.32
5631 12801 3.445805 ACAGGAAAAACGTGTGGAAATGT 59.554 39.130 0.00 0.00 44.34 2.71
5632 12802 4.081917 ACAGGAAAAACGTGTGGAAATGTT 60.082 37.500 0.00 0.00 44.34 2.71
5633 12803 5.125739 ACAGGAAAAACGTGTGGAAATGTTA 59.874 36.000 0.00 0.00 44.34 2.41
5634 12804 6.037098 CAGGAAAAACGTGTGGAAATGTTAA 58.963 36.000 0.00 0.00 0.00 2.01
5635 12805 6.531948 CAGGAAAAACGTGTGGAAATGTTAAA 59.468 34.615 0.00 0.00 0.00 1.52
5636 12806 7.223777 CAGGAAAAACGTGTGGAAATGTTAAAT 59.776 33.333 0.00 0.00 0.00 1.40
5637 12807 7.436970 AGGAAAAACGTGTGGAAATGTTAAATC 59.563 33.333 0.00 0.00 0.00 2.17
5638 12808 7.436970 GGAAAAACGTGTGGAAATGTTAAATCT 59.563 33.333 0.00 0.00 0.00 2.40
5639 12809 9.453325 GAAAAACGTGTGGAAATGTTAAATCTA 57.547 29.630 0.00 0.00 0.00 1.98
5640 12810 9.458374 AAAAACGTGTGGAAATGTTAAATCTAG 57.542 29.630 0.00 0.00 0.00 2.43
5641 12811 7.739498 AACGTGTGGAAATGTTAAATCTAGT 57.261 32.000 0.00 0.00 0.00 2.57
5642 12812 7.739498 ACGTGTGGAAATGTTAAATCTAGTT 57.261 32.000 0.00 0.00 0.00 2.24
5643 12813 7.803724 ACGTGTGGAAATGTTAAATCTAGTTC 58.196 34.615 0.00 0.00 0.00 3.01
5644 12814 7.442969 ACGTGTGGAAATGTTAAATCTAGTTCA 59.557 33.333 0.00 0.00 0.00 3.18
5645 12815 8.286800 CGTGTGGAAATGTTAAATCTAGTTCAA 58.713 33.333 0.00 0.00 0.00 2.69
5662 12832 3.140325 TCAATGTTGTGAACTCCCTCC 57.860 47.619 0.00 0.00 0.00 4.30
5663 12833 2.441375 TCAATGTTGTGAACTCCCTCCA 59.559 45.455 0.00 0.00 0.00 3.86
5664 12834 2.554032 CAATGTTGTGAACTCCCTCCAC 59.446 50.000 0.00 0.00 0.00 4.02
5665 12835 0.472471 TGTTGTGAACTCCCTCCACC 59.528 55.000 0.00 0.00 0.00 4.61
5666 12836 0.765510 GTTGTGAACTCCCTCCACCT 59.234 55.000 0.00 0.00 0.00 4.00
5667 12837 1.143073 GTTGTGAACTCCCTCCACCTT 59.857 52.381 0.00 0.00 0.00 3.50
5668 12838 1.056660 TGTGAACTCCCTCCACCTTC 58.943 55.000 0.00 0.00 0.00 3.46
5669 12839 1.056660 GTGAACTCCCTCCACCTTCA 58.943 55.000 0.00 0.00 0.00 3.02
5670 12840 1.420138 GTGAACTCCCTCCACCTTCAA 59.580 52.381 0.00 0.00 0.00 2.69
5671 12841 2.040412 GTGAACTCCCTCCACCTTCAAT 59.960 50.000 0.00 0.00 0.00 2.57
5672 12842 2.040278 TGAACTCCCTCCACCTTCAATG 59.960 50.000 0.00 0.00 0.00 2.82
5673 12843 0.329596 ACTCCCTCCACCTTCAATGC 59.670 55.000 0.00 0.00 0.00 3.56
5674 12844 0.622665 CTCCCTCCACCTTCAATGCT 59.377 55.000 0.00 0.00 0.00 3.79
5675 12845 0.620556 TCCCTCCACCTTCAATGCTC 59.379 55.000 0.00 0.00 0.00 4.26
5676 12846 0.394899 CCCTCCACCTTCAATGCTCC 60.395 60.000 0.00 0.00 0.00 4.70
5677 12847 0.329261 CCTCCACCTTCAATGCTCCA 59.671 55.000 0.00 0.00 0.00 3.86
5678 12848 1.272092 CCTCCACCTTCAATGCTCCAA 60.272 52.381 0.00 0.00 0.00 3.53
5679 12849 2.622452 CCTCCACCTTCAATGCTCCAAT 60.622 50.000 0.00 0.00 0.00 3.16
5680 12850 2.426024 CTCCACCTTCAATGCTCCAATG 59.574 50.000 0.00 0.00 0.00 2.82
5681 12851 1.134907 CCACCTTCAATGCTCCAATGC 60.135 52.381 0.00 0.00 0.00 3.56
5682 12852 1.822990 CACCTTCAATGCTCCAATGCT 59.177 47.619 0.00 0.00 0.00 3.79
5683 12853 2.097825 ACCTTCAATGCTCCAATGCTC 58.902 47.619 0.00 0.00 0.00 4.26
5684 12854 1.065102 CCTTCAATGCTCCAATGCTCG 59.935 52.381 0.00 0.00 0.00 5.03
5685 12855 2.011947 CTTCAATGCTCCAATGCTCGA 58.988 47.619 0.00 0.00 0.00 4.04
5686 12856 2.112380 TCAATGCTCCAATGCTCGAA 57.888 45.000 0.00 0.00 0.00 3.71
5687 12857 2.646930 TCAATGCTCCAATGCTCGAAT 58.353 42.857 0.00 0.00 0.00 3.34
5688 12858 3.018856 TCAATGCTCCAATGCTCGAATT 58.981 40.909 0.00 0.00 0.00 2.17
5689 12859 4.198530 TCAATGCTCCAATGCTCGAATTA 58.801 39.130 0.00 0.00 0.00 1.40
5690 12860 4.639755 TCAATGCTCCAATGCTCGAATTAA 59.360 37.500 0.00 0.00 0.00 1.40
5691 12861 4.558538 ATGCTCCAATGCTCGAATTAAC 57.441 40.909 0.00 0.00 0.00 2.01
5692 12862 3.342719 TGCTCCAATGCTCGAATTAACA 58.657 40.909 0.00 0.00 0.00 2.41
5693 12863 3.755905 TGCTCCAATGCTCGAATTAACAA 59.244 39.130 0.00 0.00 0.00 2.83
5694 12864 4.398988 TGCTCCAATGCTCGAATTAACAAT 59.601 37.500 0.00 0.00 0.00 2.71
5695 12865 5.105797 TGCTCCAATGCTCGAATTAACAATT 60.106 36.000 0.00 0.00 0.00 2.32
5696 12866 5.807011 GCTCCAATGCTCGAATTAACAATTT 59.193 36.000 0.00 0.00 0.00 1.82
5697 12867 6.311200 GCTCCAATGCTCGAATTAACAATTTT 59.689 34.615 0.00 0.00 0.00 1.82
5698 12868 7.148590 GCTCCAATGCTCGAATTAACAATTTTT 60.149 33.333 0.00 0.00 0.00 1.94
5723 12893 2.135664 CGAAGGGATCGTGTGGTATC 57.864 55.000 0.00 0.00 46.52 2.24
5724 12894 1.681793 CGAAGGGATCGTGTGGTATCT 59.318 52.381 0.00 0.00 46.52 1.98
5725 12895 2.100916 CGAAGGGATCGTGTGGTATCTT 59.899 50.000 0.00 0.00 46.52 2.40
5726 12896 3.430374 CGAAGGGATCGTGTGGTATCTTT 60.430 47.826 0.00 0.00 46.52 2.52
5727 12897 3.543680 AGGGATCGTGTGGTATCTTTG 57.456 47.619 0.00 0.00 0.00 2.77
5728 12898 3.104512 AGGGATCGTGTGGTATCTTTGA 58.895 45.455 0.00 0.00 0.00 2.69
5729 12899 3.133003 AGGGATCGTGTGGTATCTTTGAG 59.867 47.826 0.00 0.00 0.00 3.02
5730 12900 3.132289 GGGATCGTGTGGTATCTTTGAGA 59.868 47.826 0.00 0.00 0.00 3.27
5731 12901 4.382685 GGGATCGTGTGGTATCTTTGAGAA 60.383 45.833 0.00 0.00 0.00 2.87
5732 12902 5.360591 GGATCGTGTGGTATCTTTGAGAAT 58.639 41.667 0.00 0.00 0.00 2.40
5733 12903 5.817816 GGATCGTGTGGTATCTTTGAGAATT 59.182 40.000 0.00 0.00 0.00 2.17
5734 12904 6.238211 GGATCGTGTGGTATCTTTGAGAATTG 60.238 42.308 0.00 0.00 0.00 2.32
5735 12905 5.789521 TCGTGTGGTATCTTTGAGAATTGA 58.210 37.500 0.00 0.00 0.00 2.57
5736 12906 5.869344 TCGTGTGGTATCTTTGAGAATTGAG 59.131 40.000 0.00 0.00 0.00 3.02
5737 12907 5.869344 CGTGTGGTATCTTTGAGAATTGAGA 59.131 40.000 0.00 0.00 0.00 3.27
5738 12908 6.536582 CGTGTGGTATCTTTGAGAATTGAGAT 59.463 38.462 0.00 0.00 33.68 2.75
5739 12909 7.254252 CGTGTGGTATCTTTGAGAATTGAGATC 60.254 40.741 0.00 0.00 31.71 2.75
5740 12910 7.550551 GTGTGGTATCTTTGAGAATTGAGATCA 59.449 37.037 0.00 0.00 31.71 2.92
5741 12911 7.550551 TGTGGTATCTTTGAGAATTGAGATCAC 59.449 37.037 0.00 0.00 31.71 3.06
5742 12912 6.758416 TGGTATCTTTGAGAATTGAGATCACG 59.242 38.462 0.00 0.00 31.71 4.35
5743 12913 6.758886 GGTATCTTTGAGAATTGAGATCACGT 59.241 38.462 0.00 0.00 31.71 4.49
5744 12914 7.921214 GGTATCTTTGAGAATTGAGATCACGTA 59.079 37.037 0.00 0.00 31.71 3.57
5745 12915 9.469807 GTATCTTTGAGAATTGAGATCACGTAT 57.530 33.333 0.00 0.00 31.71 3.06
5748 12918 9.521503 TCTTTGAGAATTGAGATCACGTATAAG 57.478 33.333 0.00 0.00 0.00 1.73
5749 12919 7.700322 TTGAGAATTGAGATCACGTATAAGC 57.300 36.000 0.00 0.00 0.00 3.09
5750 12920 6.805713 TGAGAATTGAGATCACGTATAAGCA 58.194 36.000 0.00 0.00 0.00 3.91
5751 12921 6.920210 TGAGAATTGAGATCACGTATAAGCAG 59.080 38.462 0.00 0.00 0.00 4.24
5752 12922 5.694006 AGAATTGAGATCACGTATAAGCAGC 59.306 40.000 0.00 0.00 0.00 5.25
5753 12923 3.000082 TGAGATCACGTATAAGCAGCG 58.000 47.619 0.00 0.00 0.00 5.18
5754 12924 2.616842 TGAGATCACGTATAAGCAGCGA 59.383 45.455 0.00 0.00 0.00 4.93
5755 12925 3.253432 TGAGATCACGTATAAGCAGCGAT 59.747 43.478 0.00 0.00 0.00 4.58
5756 12926 3.569548 AGATCACGTATAAGCAGCGATG 58.430 45.455 0.00 0.00 0.00 3.84
5757 12927 1.487482 TCACGTATAAGCAGCGATGC 58.513 50.000 19.88 19.88 0.00 3.91
5759 12929 2.292292 TCACGTATAAGCAGCGATGCTA 59.708 45.455 30.56 17.19 45.54 3.49
5760 12930 3.057526 TCACGTATAAGCAGCGATGCTAT 60.058 43.478 30.56 22.37 45.54 2.97
5761 12931 3.675225 CACGTATAAGCAGCGATGCTATT 59.325 43.478 30.56 20.88 45.54 1.73
5762 12932 4.857037 CACGTATAAGCAGCGATGCTATTA 59.143 41.667 30.56 19.06 45.54 0.98
5763 12933 5.003872 CACGTATAAGCAGCGATGCTATTAG 59.996 44.000 30.56 20.37 45.54 1.73
5764 12934 4.500837 CGTATAAGCAGCGATGCTATTAGG 59.499 45.833 30.56 22.28 45.54 2.69
5765 12935 2.175878 AAGCAGCGATGCTATTAGGG 57.824 50.000 30.56 0.00 45.54 3.53
5766 12936 0.321122 AGCAGCGATGCTATTAGGGC 60.321 55.000 29.30 0.00 44.28 5.19
5767 12937 0.603707 GCAGCGATGCTATTAGGGCA 60.604 55.000 20.22 0.00 44.05 5.36
5777 12947 5.303259 TGCTATTAGGGCATGTACAATGA 57.697 39.130 0.00 0.00 34.56 2.57
5778 12948 5.879763 TGCTATTAGGGCATGTACAATGAT 58.120 37.500 0.00 0.00 34.56 2.45
5779 12949 5.706833 TGCTATTAGGGCATGTACAATGATG 59.293 40.000 0.00 0.00 34.56 3.07
5780 12950 5.124457 GCTATTAGGGCATGTACAATGATGG 59.876 44.000 0.00 0.00 0.00 3.51
5781 12951 4.518278 TTAGGGCATGTACAATGATGGT 57.482 40.909 0.00 0.00 0.00 3.55
5782 12952 5.638530 TTAGGGCATGTACAATGATGGTA 57.361 39.130 0.00 0.00 0.00 3.25
5783 12953 4.729552 AGGGCATGTACAATGATGGTAT 57.270 40.909 0.00 0.00 0.00 2.73
5784 12954 5.841267 AGGGCATGTACAATGATGGTATA 57.159 39.130 0.00 0.00 0.00 1.47
5785 12955 6.392911 AGGGCATGTACAATGATGGTATAT 57.607 37.500 0.00 0.00 0.00 0.86
5786 12956 6.182627 AGGGCATGTACAATGATGGTATATG 58.817 40.000 11.17 11.17 40.90 1.78
5787 12957 5.357878 GGGCATGTACAATGATGGTATATGG 59.642 44.000 15.65 1.98 39.38 2.74
5788 12958 6.179756 GGCATGTACAATGATGGTATATGGA 58.820 40.000 15.65 0.00 39.38 3.41
5789 12959 6.830324 GGCATGTACAATGATGGTATATGGAT 59.170 38.462 15.65 0.00 39.38 3.41
5790 12960 7.992608 GGCATGTACAATGATGGTATATGGATA 59.007 37.037 15.65 0.00 39.38 2.59
5791 12961 8.830580 GCATGTACAATGATGGTATATGGATAC 58.169 37.037 15.65 0.00 39.38 2.24
5811 12981 9.234827 TGGATACATATGCCTCATGATAAAAAG 57.765 33.333 1.58 0.00 46.17 2.27
5812 12982 9.236006 GGATACATATGCCTCATGATAAAAAGT 57.764 33.333 1.58 0.00 0.00 2.66
5821 12991 8.469200 TGCCTCATGATAAAAAGTAATTTGAGG 58.531 33.333 11.42 11.42 37.05 3.86
5822 12992 7.436376 GCCTCATGATAAAAAGTAATTTGAGGC 59.564 37.037 20.42 20.42 45.03 4.70
5823 12993 8.469200 CCTCATGATAAAAAGTAATTTGAGGCA 58.531 33.333 0.00 0.00 31.13 4.75
5857 13027 4.519540 TTTTCTCCCAAATGCAAGCTAC 57.480 40.909 0.00 0.00 0.00 3.58
5858 13028 2.128771 TCTCCCAAATGCAAGCTACC 57.871 50.000 0.00 0.00 0.00 3.18
5859 13029 1.354031 TCTCCCAAATGCAAGCTACCA 59.646 47.619 0.00 0.00 0.00 3.25
5860 13030 1.474077 CTCCCAAATGCAAGCTACCAC 59.526 52.381 0.00 0.00 0.00 4.16
5861 13031 1.075374 TCCCAAATGCAAGCTACCACT 59.925 47.619 0.00 0.00 0.00 4.00
5862 13032 2.307392 TCCCAAATGCAAGCTACCACTA 59.693 45.455 0.00 0.00 0.00 2.74
5863 13033 2.684881 CCCAAATGCAAGCTACCACTAG 59.315 50.000 0.00 0.00 0.00 2.57
5864 13034 3.347216 CCAAATGCAAGCTACCACTAGT 58.653 45.455 0.00 0.00 0.00 2.57
5865 13035 3.127548 CCAAATGCAAGCTACCACTAGTG 59.872 47.826 16.34 16.34 0.00 2.74
5866 13036 3.981071 AATGCAAGCTACCACTAGTGA 57.019 42.857 24.68 4.16 0.00 3.41
5867 13037 3.981071 ATGCAAGCTACCACTAGTGAA 57.019 42.857 24.68 10.75 0.00 3.18
5868 13038 3.040147 TGCAAGCTACCACTAGTGAAC 57.960 47.619 24.68 9.97 0.00 3.18
5869 13039 2.289444 TGCAAGCTACCACTAGTGAACC 60.289 50.000 24.68 9.21 0.00 3.62
5870 13040 2.028020 GCAAGCTACCACTAGTGAACCT 60.028 50.000 24.68 11.25 0.00 3.50
5871 13041 3.851098 CAAGCTACCACTAGTGAACCTC 58.149 50.000 24.68 8.88 0.00 3.85
5872 13042 3.170991 AGCTACCACTAGTGAACCTCA 57.829 47.619 24.68 1.70 0.00 3.86
5873 13043 3.714144 AGCTACCACTAGTGAACCTCAT 58.286 45.455 24.68 1.10 0.00 2.90
5874 13044 4.097418 AGCTACCACTAGTGAACCTCATT 58.903 43.478 24.68 0.00 0.00 2.57
5875 13045 5.269991 AGCTACCACTAGTGAACCTCATTA 58.730 41.667 24.68 1.81 0.00 1.90
5876 13046 5.720041 AGCTACCACTAGTGAACCTCATTAA 59.280 40.000 24.68 0.00 0.00 1.40
5877 13047 6.043411 GCTACCACTAGTGAACCTCATTAAG 58.957 44.000 24.68 5.20 0.00 1.85
5878 13048 6.127423 GCTACCACTAGTGAACCTCATTAAGA 60.127 42.308 24.68 0.00 0.00 2.10
5879 13049 6.681729 ACCACTAGTGAACCTCATTAAGAA 57.318 37.500 24.68 0.00 0.00 2.52
5880 13050 7.074653 ACCACTAGTGAACCTCATTAAGAAA 57.925 36.000 24.68 0.00 0.00 2.52
5881 13051 7.690256 ACCACTAGTGAACCTCATTAAGAAAT 58.310 34.615 24.68 0.00 0.00 2.17
5882 13052 8.822805 ACCACTAGTGAACCTCATTAAGAAATA 58.177 33.333 24.68 0.00 0.00 1.40
5883 13053 9.319143 CCACTAGTGAACCTCATTAAGAAATAG 57.681 37.037 24.68 0.00 0.00 1.73
5943 13113 8.710835 TTTTACTCCAACCTTTTTAGCTTTTG 57.289 30.769 0.00 0.00 0.00 2.44
5944 13114 5.932619 ACTCCAACCTTTTTAGCTTTTGT 57.067 34.783 0.00 0.00 0.00 2.83
5945 13115 5.902681 ACTCCAACCTTTTTAGCTTTTGTC 58.097 37.500 0.00 0.00 0.00 3.18
5946 13116 5.420739 ACTCCAACCTTTTTAGCTTTTGTCA 59.579 36.000 0.00 0.00 0.00 3.58
5947 13117 5.656480 TCCAACCTTTTTAGCTTTTGTCAC 58.344 37.500 0.00 0.00 0.00 3.67
5948 13118 5.420739 TCCAACCTTTTTAGCTTTTGTCACT 59.579 36.000 0.00 0.00 0.00 3.41
5949 13119 5.519927 CCAACCTTTTTAGCTTTTGTCACTG 59.480 40.000 0.00 0.00 0.00 3.66
5950 13120 5.262588 ACCTTTTTAGCTTTTGTCACTGG 57.737 39.130 0.00 0.00 0.00 4.00
5951 13121 4.953579 ACCTTTTTAGCTTTTGTCACTGGA 59.046 37.500 0.00 0.00 0.00 3.86
5952 13122 5.598417 ACCTTTTTAGCTTTTGTCACTGGAT 59.402 36.000 0.00 0.00 0.00 3.41
5953 13123 6.152379 CCTTTTTAGCTTTTGTCACTGGATC 58.848 40.000 0.00 0.00 0.00 3.36
5954 13124 5.356882 TTTTAGCTTTTGTCACTGGATCG 57.643 39.130 0.00 0.00 0.00 3.69
5955 13125 1.160137 AGCTTTTGTCACTGGATCGC 58.840 50.000 0.00 0.00 0.00 4.58
5956 13126 0.179215 GCTTTTGTCACTGGATCGCG 60.179 55.000 0.00 0.00 0.00 5.87
5957 13127 0.179215 CTTTTGTCACTGGATCGCGC 60.179 55.000 0.00 0.00 0.00 6.86
5958 13128 0.602638 TTTTGTCACTGGATCGCGCT 60.603 50.000 5.56 0.00 0.00 5.92
5959 13129 0.602638 TTTGTCACTGGATCGCGCTT 60.603 50.000 5.56 0.00 0.00 4.68
5960 13130 0.602638 TTGTCACTGGATCGCGCTTT 60.603 50.000 5.56 0.00 0.00 3.51
5961 13131 0.602638 TGTCACTGGATCGCGCTTTT 60.603 50.000 5.56 0.00 0.00 2.27
5962 13132 0.517316 GTCACTGGATCGCGCTTTTT 59.483 50.000 5.56 0.00 0.00 1.94
5963 13133 0.796312 TCACTGGATCGCGCTTTTTC 59.204 50.000 5.56 0.00 0.00 2.29
5964 13134 0.798776 CACTGGATCGCGCTTTTTCT 59.201 50.000 5.56 0.00 0.00 2.52
5965 13135 1.079503 ACTGGATCGCGCTTTTTCTC 58.920 50.000 5.56 0.00 0.00 2.87
5966 13136 1.338200 ACTGGATCGCGCTTTTTCTCT 60.338 47.619 5.56 0.00 0.00 3.10
5967 13137 1.734465 CTGGATCGCGCTTTTTCTCTT 59.266 47.619 5.56 0.00 0.00 2.85
5968 13138 1.732259 TGGATCGCGCTTTTTCTCTTC 59.268 47.619 5.56 0.00 0.00 2.87
5969 13139 1.732259 GGATCGCGCTTTTTCTCTTCA 59.268 47.619 5.56 0.00 0.00 3.02
5970 13140 2.159627 GGATCGCGCTTTTTCTCTTCAA 59.840 45.455 5.56 0.00 0.00 2.69
5971 13141 3.364964 GGATCGCGCTTTTTCTCTTCAAA 60.365 43.478 5.56 0.00 0.00 2.69
5972 13142 2.981875 TCGCGCTTTTTCTCTTCAAAC 58.018 42.857 5.56 0.00 0.00 2.93
5973 13143 2.353269 TCGCGCTTTTTCTCTTCAAACA 59.647 40.909 5.56 0.00 0.00 2.83
5974 13144 2.464016 CGCGCTTTTTCTCTTCAAACAC 59.536 45.455 5.56 0.00 0.00 3.32
5975 13145 2.789339 GCGCTTTTTCTCTTCAAACACC 59.211 45.455 0.00 0.00 0.00 4.16
5976 13146 3.489229 GCGCTTTTTCTCTTCAAACACCT 60.489 43.478 0.00 0.00 0.00 4.00
5977 13147 4.037690 CGCTTTTTCTCTTCAAACACCTG 58.962 43.478 0.00 0.00 0.00 4.00
5978 13148 3.798878 GCTTTTTCTCTTCAAACACCTGC 59.201 43.478 0.00 0.00 0.00 4.85
5979 13149 4.440663 GCTTTTTCTCTTCAAACACCTGCT 60.441 41.667 0.00 0.00 0.00 4.24
5980 13150 5.654497 CTTTTTCTCTTCAAACACCTGCTT 58.346 37.500 0.00 0.00 0.00 3.91
5981 13151 4.900635 TTTCTCTTCAAACACCTGCTTC 57.099 40.909 0.00 0.00 0.00 3.86
5982 13152 2.851195 TCTCTTCAAACACCTGCTTCC 58.149 47.619 0.00 0.00 0.00 3.46
5983 13153 2.439507 TCTCTTCAAACACCTGCTTCCT 59.560 45.455 0.00 0.00 0.00 3.36
5984 13154 2.551459 CTCTTCAAACACCTGCTTCCTG 59.449 50.000 0.00 0.00 0.00 3.86
5985 13155 1.610522 CTTCAAACACCTGCTTCCTGG 59.389 52.381 0.00 0.00 36.24 4.45
5986 13156 0.843309 TCAAACACCTGCTTCCTGGA 59.157 50.000 0.00 0.00 34.43 3.86
5987 13157 1.214175 TCAAACACCTGCTTCCTGGAA 59.786 47.619 9.14 9.14 34.43 3.53
5988 13158 2.031120 CAAACACCTGCTTCCTGGAAA 58.969 47.619 10.86 0.00 34.43 3.13
5989 13159 1.986882 AACACCTGCTTCCTGGAAAG 58.013 50.000 10.86 5.90 34.43 2.62
5990 13160 0.111253 ACACCTGCTTCCTGGAAAGG 59.889 55.000 20.73 20.73 34.43 3.11
5991 13161 0.401738 CACCTGCTTCCTGGAAAGGA 59.598 55.000 26.59 14.32 35.93 3.36
5992 13162 1.005215 CACCTGCTTCCTGGAAAGGAT 59.995 52.381 26.59 12.76 37.87 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.562635 TGTCATTGTATTCGGGTAGGTTTT 58.437 37.500 0.00 0.00 0.00 2.43
35 36 1.001378 GGCCCGCATGTCATTGTATTC 60.001 52.381 0.00 0.00 0.00 1.75
39 40 1.920734 TAGGGCCCGCATGTCATTGT 61.921 55.000 18.44 0.00 0.00 2.71
57 58 1.675219 GTGGGGCGACAAGGTCTTA 59.325 57.895 0.00 0.00 0.00 2.10
60 61 3.998672 TCGTGGGGCGACAAGGTC 61.999 66.667 0.00 0.00 45.68 3.85
111 112 3.312697 ACTTTGTTCGAGAAGGTTTCTGC 59.687 43.478 9.22 0.00 40.87 4.26
431 440 2.582226 CTCGTCGCGCTGCCAATA 60.582 61.111 5.56 0.00 0.00 1.90
466 476 4.799564 TCTTCTCTCTTGCTCTCCTTTC 57.200 45.455 0.00 0.00 0.00 2.62
467 477 5.306678 TCTTTCTTCTCTCTTGCTCTCCTTT 59.693 40.000 0.00 0.00 0.00 3.11
475 486 3.513515 TCCTCCTCTTTCTTCTCTCTTGC 59.486 47.826 0.00 0.00 0.00 4.01
620 631 1.146263 GTTGGGATTCCGGAGCGAT 59.854 57.895 3.34 0.00 35.24 4.58
901 915 4.879545 ACACACAACGAATTGAAACCTAGT 59.120 37.500 0.00 0.00 39.30 2.57
1151 1191 1.284297 GATGCACTTGCGTTTTGGCC 61.284 55.000 0.00 0.00 45.83 5.36
1255 1295 3.271142 GCTCTGAGCGGAATCTCTG 57.729 57.895 14.68 0.00 34.29 3.35
1385 3171 2.190578 GGAGAACATGGCTCCCCG 59.809 66.667 20.48 0.00 44.96 5.73
1884 3670 2.280797 GTTGGCCTGACACGCTCA 60.281 61.111 3.32 0.00 0.00 4.26
2235 4033 4.536090 TGAGAACCTCAAAGGGTACATGAT 59.464 41.667 0.00 0.00 33.59 2.45
2305 4106 1.066002 CACCACCTGAGTGCACAAAAG 59.934 52.381 21.04 12.64 43.09 2.27
2547 4353 9.482627 GGAAATATAGAGATGGTCAAAGTAGTG 57.517 37.037 0.00 0.00 0.00 2.74
2631 4457 2.521105 ACGACGTTTAGCCAAAGACT 57.479 45.000 0.00 0.00 0.00 3.24
2950 4865 6.009589 TCCAAAAAGCATCTATCAACCTCAA 58.990 36.000 0.00 0.00 0.00 3.02
2952 4867 6.515272 TTCCAAAAAGCATCTATCAACCTC 57.485 37.500 0.00 0.00 0.00 3.85
2954 4869 6.691508 ACTTTCCAAAAAGCATCTATCAACC 58.308 36.000 0.00 0.00 44.82 3.77
2955 4870 9.860898 AATACTTTCCAAAAAGCATCTATCAAC 57.139 29.630 0.00 0.00 44.82 3.18
2956 4871 9.859427 CAATACTTTCCAAAAAGCATCTATCAA 57.141 29.630 0.00 0.00 44.82 2.57
2957 4872 8.469200 CCAATACTTTCCAAAAAGCATCTATCA 58.531 33.333 0.00 0.00 44.82 2.15
2958 4873 8.686334 TCCAATACTTTCCAAAAAGCATCTATC 58.314 33.333 0.00 0.00 44.82 2.08
2972 4904 8.794335 AGAATCTGTAGTTTCCAATACTTTCC 57.206 34.615 0.00 0.00 0.00 3.13
3070 5012 3.875727 CGATCTGAGGACTAGAAACCGTA 59.124 47.826 0.00 0.00 0.00 4.02
3103 5050 4.631377 CGAGTCAGAATCTGCATTACCAAA 59.369 41.667 5.18 0.00 0.00 3.28
3266 5232 0.696501 ACTGGCGGGTTTAATCCTGT 59.303 50.000 12.11 0.80 36.33 4.00
3327 5296 3.081804 ACAGAGGCGGTAAAGAAAATGG 58.918 45.455 0.00 0.00 0.00 3.16
3687 5674 6.583562 ACAAGGTAGCACATATAAGAGGTTC 58.416 40.000 0.00 0.00 0.00 3.62
3735 5722 6.535540 TCTGGTATTTTAGTAACCTGCAACA 58.464 36.000 0.00 0.00 34.23 3.33
3736 5723 7.040961 TGTTCTGGTATTTTAGTAACCTGCAAC 60.041 37.037 0.00 0.00 34.23 4.17
3819 5812 2.041701 CAAAGGGGCATTGGGGATAAG 58.958 52.381 0.00 0.00 0.00 1.73
3958 11059 5.894298 ACATAATCATGCTTACCCTCAGA 57.106 39.130 0.00 0.00 35.39 3.27
4187 11289 8.474025 TGAAGGAAAGAAAGCAAGATGTAAAAA 58.526 29.630 0.00 0.00 0.00 1.94
4198 11300 4.154195 GCGAGTAATGAAGGAAAGAAAGCA 59.846 41.667 0.00 0.00 0.00 3.91
4217 11319 0.037882 TCAGAAAGAGGTGCAGCGAG 60.038 55.000 10.78 0.00 0.00 5.03
4340 11442 1.553690 GGAGGGAGTACTTGGCAGCA 61.554 60.000 0.00 0.00 0.00 4.41
4341 11443 1.222113 GGAGGGAGTACTTGGCAGC 59.778 63.158 0.00 0.00 0.00 5.25
4343 11445 1.229082 ACGGAGGGAGTACTTGGCA 60.229 57.895 0.00 0.00 0.00 4.92
4344 11446 1.516423 GACGGAGGGAGTACTTGGC 59.484 63.158 0.00 0.00 0.00 4.52
4345 11447 1.328430 GGGACGGAGGGAGTACTTGG 61.328 65.000 0.00 0.00 0.00 3.61
4346 11448 0.613853 TGGGACGGAGGGAGTACTTG 60.614 60.000 0.00 0.00 0.00 3.16
4347 11449 0.115745 TTGGGACGGAGGGAGTACTT 59.884 55.000 0.00 0.00 0.00 2.24
4348 11450 0.115745 TTTGGGACGGAGGGAGTACT 59.884 55.000 0.00 0.00 0.00 2.73
4349 11451 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
4350 11452 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4351 11453 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
4352 11454 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4353 11455 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
4354 11456 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4355 11457 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4356 11458 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4357 11459 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4358 11460 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4359 11461 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4360 11462 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
4361 11463 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4362 11464 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4394 11496 9.740239 GTCACGTTTTAGTATTAGATACATCCA 57.260 33.333 0.00 0.00 38.21 3.41
4395 11497 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
4405 11507 9.871238 AGATGTATCAAGTCACGTTTTAGTATT 57.129 29.630 0.00 0.00 0.00 1.89
4406 11508 9.302345 CAGATGTATCAAGTCACGTTTTAGTAT 57.698 33.333 0.00 0.00 0.00 2.12
4407 11509 8.301720 ACAGATGTATCAAGTCACGTTTTAGTA 58.698 33.333 0.00 0.00 0.00 1.82
4408 11510 7.152645 ACAGATGTATCAAGTCACGTTTTAGT 58.847 34.615 0.00 0.00 0.00 2.24
4409 11511 7.582435 ACAGATGTATCAAGTCACGTTTTAG 57.418 36.000 0.00 0.00 0.00 1.85
4410 11512 9.647797 AATACAGATGTATCAAGTCACGTTTTA 57.352 29.630 5.97 0.00 40.10 1.52
4411 11513 8.547967 AATACAGATGTATCAAGTCACGTTTT 57.452 30.769 5.97 0.00 40.10 2.43
4412 11514 8.547967 AAATACAGATGTATCAAGTCACGTTT 57.452 30.769 5.97 0.00 40.10 3.60
4413 11515 9.302345 CTAAATACAGATGTATCAAGTCACGTT 57.698 33.333 5.97 0.00 40.10 3.99
4414 11516 8.683615 TCTAAATACAGATGTATCAAGTCACGT 58.316 33.333 5.97 0.00 40.10 4.49
4415 11517 8.959058 GTCTAAATACAGATGTATCAAGTCACG 58.041 37.037 5.97 0.00 40.10 4.35
4416 11518 9.803315 TGTCTAAATACAGATGTATCAAGTCAC 57.197 33.333 5.97 3.82 40.10 3.67
4438 11540 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4439 11541 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4440 11542 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4441 11543 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4442 11544 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4443 11545 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4444 11546 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4445 11547 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4446 11548 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4447 11549 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4448 11550 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4449 11551 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4450 11552 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4451 11553 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4452 11554 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4453 11555 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4454 11556 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4455 11557 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4456 11558 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4457 11559 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4458 11560 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
4459 11561 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
4460 11562 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
4461 11563 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
4462 11564 1.689984 CTTACTACTCCCTCCGTCCC 58.310 60.000 0.00 0.00 0.00 4.46
4463 11565 1.031235 GCTTACTACTCCCTCCGTCC 58.969 60.000 0.00 0.00 0.00 4.79
4464 11566 1.948834 GAGCTTACTACTCCCTCCGTC 59.051 57.143 0.00 0.00 0.00 4.79
4465 11567 1.409942 GGAGCTTACTACTCCCTCCGT 60.410 57.143 0.00 0.00 46.81 4.69
4466 11568 1.320507 GGAGCTTACTACTCCCTCCG 58.679 60.000 0.00 0.00 46.81 4.63
4595 11700 0.895530 CTCTCAAGGTCCCGCTTACA 59.104 55.000 0.00 0.00 0.00 2.41
4688 11793 8.371770 ACAAACTTTTAGCAACAAGACAAAAA 57.628 26.923 0.00 0.00 0.00 1.94
4998 12113 2.746362 GAGAAGGCTCCAACATGTCAAG 59.254 50.000 0.00 0.00 35.01 3.02
5020 12137 5.702670 ACACATCGATTGTTCTGTCTTTGAT 59.297 36.000 0.00 0.00 36.00 2.57
5039 12156 3.451902 CCCAGCAATTTTCCCATACACAT 59.548 43.478 0.00 0.00 0.00 3.21
5040 12157 2.830923 CCCAGCAATTTTCCCATACACA 59.169 45.455 0.00 0.00 0.00 3.72
5041 12158 2.831526 ACCCAGCAATTTTCCCATACAC 59.168 45.455 0.00 0.00 0.00 2.90
5042 12159 3.182887 ACCCAGCAATTTTCCCATACA 57.817 42.857 0.00 0.00 0.00 2.29
5043 12160 4.918810 CTACCCAGCAATTTTCCCATAC 57.081 45.455 0.00 0.00 0.00 2.39
5190 12336 1.337167 GCAGGAAAACATGGTTGCCTC 60.337 52.381 21.24 11.65 0.00 4.70
5191 12337 0.681175 GCAGGAAAACATGGTTGCCT 59.319 50.000 18.28 18.28 0.00 4.75
5192 12338 0.392336 TGCAGGAAAACATGGTTGCC 59.608 50.000 13.28 13.28 0.00 4.52
5193 12339 1.501169 GTGCAGGAAAACATGGTTGC 58.499 50.000 0.00 0.00 0.00 4.17
5194 12340 1.602668 CCGTGCAGGAAAACATGGTTG 60.603 52.381 8.24 0.00 45.00 3.77
5195 12341 0.673437 CCGTGCAGGAAAACATGGTT 59.327 50.000 8.24 0.00 45.00 3.67
5196 12342 1.805428 GCCGTGCAGGAAAACATGGT 61.805 55.000 8.24 0.00 43.60 3.55
5197 12343 1.080569 GCCGTGCAGGAAAACATGG 60.081 57.895 8.24 0.00 45.00 3.66
5198 12344 1.080569 GGCCGTGCAGGAAAACATG 60.081 57.895 8.24 0.00 45.00 3.21
5199 12345 2.275380 GGGCCGTGCAGGAAAACAT 61.275 57.895 8.24 0.00 45.00 2.71
5200 12346 2.909965 GGGCCGTGCAGGAAAACA 60.910 61.111 8.24 0.00 45.00 2.83
5201 12347 2.597510 AGGGCCGTGCAGGAAAAC 60.598 61.111 8.24 0.00 45.00 2.43
5202 12348 2.597217 CAGGGCCGTGCAGGAAAA 60.597 61.111 13.37 0.00 45.00 2.29
5203 12349 3.126703 TTCAGGGCCGTGCAGGAAA 62.127 57.895 20.76 6.49 45.00 3.13
5204 12350 3.551496 CTTCAGGGCCGTGCAGGAA 62.551 63.158 20.76 8.70 45.00 3.36
5205 12351 4.020617 CTTCAGGGCCGTGCAGGA 62.021 66.667 20.76 0.00 45.00 3.86
5216 12362 3.088532 CGATCTCTATCCTCCCTTCAGG 58.911 54.545 0.00 0.00 34.40 3.86
5217 12363 4.009675 CTCGATCTCTATCCTCCCTTCAG 58.990 52.174 0.00 0.00 0.00 3.02
5218 12364 3.245087 CCTCGATCTCTATCCTCCCTTCA 60.245 52.174 0.00 0.00 0.00 3.02
5219 12365 3.352648 CCTCGATCTCTATCCTCCCTTC 58.647 54.545 0.00 0.00 0.00 3.46
5220 12366 2.556559 GCCTCGATCTCTATCCTCCCTT 60.557 54.545 0.00 0.00 0.00 3.95
5221 12367 1.005450 GCCTCGATCTCTATCCTCCCT 59.995 57.143 0.00 0.00 0.00 4.20
5222 12368 1.470051 GCCTCGATCTCTATCCTCCC 58.530 60.000 0.00 0.00 0.00 4.30
5223 12369 1.272203 TGGCCTCGATCTCTATCCTCC 60.272 57.143 3.32 0.00 0.00 4.30
5224 12370 1.816224 GTGGCCTCGATCTCTATCCTC 59.184 57.143 3.32 0.00 0.00 3.71
5225 12371 1.549037 GGTGGCCTCGATCTCTATCCT 60.549 57.143 3.32 0.00 0.00 3.24
5226 12372 0.892063 GGTGGCCTCGATCTCTATCC 59.108 60.000 3.32 0.00 0.00 2.59
5227 12373 1.621992 TGGTGGCCTCGATCTCTATC 58.378 55.000 3.32 0.00 0.00 2.08
5228 12374 1.898472 CATGGTGGCCTCGATCTCTAT 59.102 52.381 3.32 0.00 0.00 1.98
5229 12375 1.332195 CATGGTGGCCTCGATCTCTA 58.668 55.000 3.32 0.00 0.00 2.43
5230 12376 0.689080 ACATGGTGGCCTCGATCTCT 60.689 55.000 3.32 0.00 0.00 3.10
5231 12377 0.179000 AACATGGTGGCCTCGATCTC 59.821 55.000 3.32 0.00 0.00 2.75
5232 12378 0.620556 AAACATGGTGGCCTCGATCT 59.379 50.000 3.32 0.00 0.00 2.75
5233 12379 1.401905 GAAAACATGGTGGCCTCGATC 59.598 52.381 3.32 0.00 0.00 3.69
5234 12380 1.463674 GAAAACATGGTGGCCTCGAT 58.536 50.000 3.32 0.00 0.00 3.59
5235 12381 0.608035 GGAAAACATGGTGGCCTCGA 60.608 55.000 3.32 0.00 0.00 4.04
5236 12382 0.609131 AGGAAAACATGGTGGCCTCG 60.609 55.000 3.32 0.00 0.00 4.63
5251 12397 4.659172 CCAAGGGCCGTGCAGGAA 62.659 66.667 14.49 0.00 45.00 3.36
5343 12491 1.586564 CGCGTCTCGATTCTGGGAC 60.587 63.158 0.00 0.00 41.67 4.46
5360 12509 3.052082 CAACAGCTCCCAGCACCG 61.052 66.667 0.00 0.00 45.56 4.94
5361 12510 1.968540 GACAACAGCTCCCAGCACC 60.969 63.158 0.00 0.00 45.56 5.01
5362 12511 2.320587 CGACAACAGCTCCCAGCAC 61.321 63.158 0.00 0.00 45.56 4.40
5404 12553 4.301072 TTTGGTCCTCCTGTATTTCCAG 57.699 45.455 0.00 0.00 34.23 3.86
5405 12554 4.569653 CCATTTGGTCCTCCTGTATTTCCA 60.570 45.833 0.00 0.00 34.23 3.53
5406 12555 3.954258 CCATTTGGTCCTCCTGTATTTCC 59.046 47.826 0.00 0.00 34.23 3.13
5445 12609 1.748122 CACAGTGCAGATGGGAGGC 60.748 63.158 4.03 0.00 0.00 4.70
5451 12615 2.418976 CACTTGGATCACAGTGCAGATG 59.581 50.000 9.83 0.00 0.00 2.90
5499 12663 6.454795 ACTAATAAGAGAAGCTATGCTGAGC 58.545 40.000 0.00 0.00 39.62 4.26
5518 12682 7.226523 GGAAGCAACAAAACATCCAAAACTAAT 59.773 33.333 0.00 0.00 0.00 1.73
5572 12739 4.440112 GCAAACAACTAAAGCACTTCCTGT 60.440 41.667 0.00 0.00 0.00 4.00
5573 12740 4.044426 GCAAACAACTAAAGCACTTCCTG 58.956 43.478 0.00 0.00 0.00 3.86
5603 12773 4.458295 TCCACACGTTTTTCCTGTTACAAA 59.542 37.500 0.00 0.00 0.00 2.83
5604 12774 4.008330 TCCACACGTTTTTCCTGTTACAA 58.992 39.130 0.00 0.00 0.00 2.41
5605 12775 3.607741 TCCACACGTTTTTCCTGTTACA 58.392 40.909 0.00 0.00 0.00 2.41
5606 12776 4.619437 TTCCACACGTTTTTCCTGTTAC 57.381 40.909 0.00 0.00 0.00 2.50
5607 12777 5.125739 ACATTTCCACACGTTTTTCCTGTTA 59.874 36.000 0.00 0.00 0.00 2.41
5608 12778 4.081917 ACATTTCCACACGTTTTTCCTGTT 60.082 37.500 0.00 0.00 0.00 3.16
5609 12779 3.445805 ACATTTCCACACGTTTTTCCTGT 59.554 39.130 0.00 0.00 0.00 4.00
5610 12780 4.040445 ACATTTCCACACGTTTTTCCTG 57.960 40.909 0.00 0.00 0.00 3.86
5611 12781 4.729227 AACATTTCCACACGTTTTTCCT 57.271 36.364 0.00 0.00 0.00 3.36
5612 12782 6.889019 TTTAACATTTCCACACGTTTTTCC 57.111 33.333 0.00 0.00 0.00 3.13
5613 12783 8.347729 AGATTTAACATTTCCACACGTTTTTC 57.652 30.769 0.00 0.00 0.00 2.29
5614 12784 9.458374 CTAGATTTAACATTTCCACACGTTTTT 57.542 29.630 0.00 0.00 0.00 1.94
5615 12785 8.626526 ACTAGATTTAACATTTCCACACGTTTT 58.373 29.630 0.00 0.00 0.00 2.43
5616 12786 8.161699 ACTAGATTTAACATTTCCACACGTTT 57.838 30.769 0.00 0.00 0.00 3.60
5617 12787 7.739498 ACTAGATTTAACATTTCCACACGTT 57.261 32.000 0.00 0.00 0.00 3.99
5618 12788 7.442969 TGAACTAGATTTAACATTTCCACACGT 59.557 33.333 0.00 0.00 0.00 4.49
5619 12789 7.802738 TGAACTAGATTTAACATTTCCACACG 58.197 34.615 0.00 0.00 0.00 4.49
5641 12811 3.117701 TGGAGGGAGTTCACAACATTGAA 60.118 43.478 0.00 0.00 32.94 2.69
5642 12812 2.441375 TGGAGGGAGTTCACAACATTGA 59.559 45.455 0.00 0.00 0.00 2.57
5643 12813 2.554032 GTGGAGGGAGTTCACAACATTG 59.446 50.000 0.00 0.00 0.00 2.82
5644 12814 2.489073 GGTGGAGGGAGTTCACAACATT 60.489 50.000 0.00 0.00 33.45 2.71
5645 12815 1.073923 GGTGGAGGGAGTTCACAACAT 59.926 52.381 0.00 0.00 33.45 2.71
5646 12816 0.472471 GGTGGAGGGAGTTCACAACA 59.528 55.000 0.00 0.00 33.45 3.33
5647 12817 0.765510 AGGTGGAGGGAGTTCACAAC 59.234 55.000 0.00 0.00 33.45 3.32
5648 12818 1.420138 GAAGGTGGAGGGAGTTCACAA 59.580 52.381 0.00 0.00 33.45 3.33
5649 12819 1.056660 GAAGGTGGAGGGAGTTCACA 58.943 55.000 0.00 0.00 33.45 3.58
5650 12820 1.056660 TGAAGGTGGAGGGAGTTCAC 58.943 55.000 0.00 0.00 0.00 3.18
5651 12821 1.814429 TTGAAGGTGGAGGGAGTTCA 58.186 50.000 0.00 0.00 0.00 3.18
5652 12822 2.716217 CATTGAAGGTGGAGGGAGTTC 58.284 52.381 0.00 0.00 0.00 3.01
5653 12823 1.272147 GCATTGAAGGTGGAGGGAGTT 60.272 52.381 0.00 0.00 0.00 3.01
5654 12824 0.329596 GCATTGAAGGTGGAGGGAGT 59.670 55.000 0.00 0.00 0.00 3.85
5655 12825 0.622665 AGCATTGAAGGTGGAGGGAG 59.377 55.000 0.00 0.00 0.00 4.30
5656 12826 0.620556 GAGCATTGAAGGTGGAGGGA 59.379 55.000 0.00 0.00 0.00 4.20
5657 12827 0.394899 GGAGCATTGAAGGTGGAGGG 60.395 60.000 0.00 0.00 0.00 4.30
5658 12828 0.329261 TGGAGCATTGAAGGTGGAGG 59.671 55.000 0.00 0.00 0.00 4.30
5659 12829 2.205022 TTGGAGCATTGAAGGTGGAG 57.795 50.000 0.00 0.00 0.00 3.86
5660 12830 2.449464 CATTGGAGCATTGAAGGTGGA 58.551 47.619 0.00 0.00 0.00 4.02
5661 12831 1.134907 GCATTGGAGCATTGAAGGTGG 60.135 52.381 0.00 0.00 0.00 4.61
5662 12832 1.822990 AGCATTGGAGCATTGAAGGTG 59.177 47.619 0.00 0.00 36.85 4.00
5663 12833 2.097825 GAGCATTGGAGCATTGAAGGT 58.902 47.619 0.00 0.00 36.85 3.50
5664 12834 1.065102 CGAGCATTGGAGCATTGAAGG 59.935 52.381 0.00 0.00 36.85 3.46
5665 12835 2.011947 TCGAGCATTGGAGCATTGAAG 58.988 47.619 0.00 0.00 36.85 3.02
5666 12836 2.112380 TCGAGCATTGGAGCATTGAA 57.888 45.000 0.00 0.00 36.85 2.69
5667 12837 2.112380 TTCGAGCATTGGAGCATTGA 57.888 45.000 0.00 0.00 36.85 2.57
5668 12838 3.431922 AATTCGAGCATTGGAGCATTG 57.568 42.857 0.00 0.00 36.85 2.82
5669 12839 4.398988 TGTTAATTCGAGCATTGGAGCATT 59.601 37.500 0.00 0.00 36.85 3.56
5670 12840 3.947196 TGTTAATTCGAGCATTGGAGCAT 59.053 39.130 0.00 0.00 36.85 3.79
5671 12841 3.342719 TGTTAATTCGAGCATTGGAGCA 58.657 40.909 0.00 0.00 36.85 4.26
5672 12842 4.355543 TTGTTAATTCGAGCATTGGAGC 57.644 40.909 0.00 0.00 0.00 4.70
5673 12843 7.816945 AAAATTGTTAATTCGAGCATTGGAG 57.183 32.000 0.00 0.00 0.00 3.86
5705 12875 3.821421 AAGATACCACACGATCCCTTC 57.179 47.619 0.00 0.00 0.00 3.46
5706 12876 3.517901 TCAAAGATACCACACGATCCCTT 59.482 43.478 0.00 0.00 0.00 3.95
5707 12877 3.104512 TCAAAGATACCACACGATCCCT 58.895 45.455 0.00 0.00 0.00 4.20
5708 12878 3.132289 TCTCAAAGATACCACACGATCCC 59.868 47.826 0.00 0.00 0.00 3.85
5709 12879 4.386867 TCTCAAAGATACCACACGATCC 57.613 45.455 0.00 0.00 0.00 3.36
5710 12880 6.535150 TCAATTCTCAAAGATACCACACGATC 59.465 38.462 0.00 0.00 0.00 3.69
5711 12881 6.406370 TCAATTCTCAAAGATACCACACGAT 58.594 36.000 0.00 0.00 0.00 3.73
5712 12882 5.789521 TCAATTCTCAAAGATACCACACGA 58.210 37.500 0.00 0.00 0.00 4.35
5713 12883 5.869344 TCTCAATTCTCAAAGATACCACACG 59.131 40.000 0.00 0.00 0.00 4.49
5714 12884 7.550551 TGATCTCAATTCTCAAAGATACCACAC 59.449 37.037 0.00 0.00 0.00 3.82
5715 12885 7.550551 GTGATCTCAATTCTCAAAGATACCACA 59.449 37.037 0.00 0.00 29.83 4.17
5716 12886 7.254252 CGTGATCTCAATTCTCAAAGATACCAC 60.254 40.741 0.00 0.00 0.00 4.16
5717 12887 6.758416 CGTGATCTCAATTCTCAAAGATACCA 59.242 38.462 0.00 0.00 0.00 3.25
5718 12888 6.758886 ACGTGATCTCAATTCTCAAAGATACC 59.241 38.462 0.00 0.00 0.00 2.73
5719 12889 7.763172 ACGTGATCTCAATTCTCAAAGATAC 57.237 36.000 0.00 0.00 0.00 2.24
5722 12892 9.521503 CTTATACGTGATCTCAATTCTCAAAGA 57.478 33.333 0.00 0.00 0.00 2.52
5723 12893 8.272176 GCTTATACGTGATCTCAATTCTCAAAG 58.728 37.037 0.00 0.00 0.00 2.77
5724 12894 7.763985 TGCTTATACGTGATCTCAATTCTCAAA 59.236 33.333 0.00 0.00 0.00 2.69
5725 12895 7.264947 TGCTTATACGTGATCTCAATTCTCAA 58.735 34.615 0.00 0.00 0.00 3.02
5726 12896 6.805713 TGCTTATACGTGATCTCAATTCTCA 58.194 36.000 0.00 0.00 0.00 3.27
5727 12897 6.128956 GCTGCTTATACGTGATCTCAATTCTC 60.129 42.308 0.00 0.00 0.00 2.87
5728 12898 5.694006 GCTGCTTATACGTGATCTCAATTCT 59.306 40.000 0.00 0.00 0.00 2.40
5729 12899 5.387855 CGCTGCTTATACGTGATCTCAATTC 60.388 44.000 0.00 0.00 0.00 2.17
5730 12900 4.445718 CGCTGCTTATACGTGATCTCAATT 59.554 41.667 0.00 0.00 0.00 2.32
5731 12901 3.983988 CGCTGCTTATACGTGATCTCAAT 59.016 43.478 0.00 0.00 0.00 2.57
5732 12902 3.066203 TCGCTGCTTATACGTGATCTCAA 59.934 43.478 0.00 0.00 0.00 3.02
5733 12903 2.616842 TCGCTGCTTATACGTGATCTCA 59.383 45.455 0.00 0.00 0.00 3.27
5734 12904 3.269486 TCGCTGCTTATACGTGATCTC 57.731 47.619 0.00 0.00 0.00 2.75
5735 12905 3.569548 CATCGCTGCTTATACGTGATCT 58.430 45.455 0.00 0.00 0.00 2.75
5736 12906 2.091277 GCATCGCTGCTTATACGTGATC 59.909 50.000 3.51 0.00 45.32 2.92
5737 12907 2.061773 GCATCGCTGCTTATACGTGAT 58.938 47.619 3.51 0.00 45.32 3.06
5738 12908 1.487482 GCATCGCTGCTTATACGTGA 58.513 50.000 3.51 0.00 45.32 4.35
5749 12919 3.612517 TGCCCTAATAGCATCGCTG 57.387 52.632 0.00 0.00 40.10 5.18
5755 12925 5.303259 TCATTGTACATGCCCTAATAGCA 57.697 39.130 0.00 0.00 45.94 3.49
5756 12926 5.124457 CCATCATTGTACATGCCCTAATAGC 59.876 44.000 0.00 0.00 0.00 2.97
5757 12927 6.240894 ACCATCATTGTACATGCCCTAATAG 58.759 40.000 0.00 0.00 0.00 1.73
5758 12928 6.199557 ACCATCATTGTACATGCCCTAATA 57.800 37.500 0.00 0.00 0.00 0.98
5759 12929 5.065613 ACCATCATTGTACATGCCCTAAT 57.934 39.130 0.00 0.00 0.00 1.73
5760 12930 4.518278 ACCATCATTGTACATGCCCTAA 57.482 40.909 0.00 0.00 0.00 2.69
5761 12931 5.841267 ATACCATCATTGTACATGCCCTA 57.159 39.130 0.00 0.00 0.00 3.53
5762 12932 4.729552 ATACCATCATTGTACATGCCCT 57.270 40.909 0.00 0.00 0.00 5.19
5763 12933 5.357878 CCATATACCATCATTGTACATGCCC 59.642 44.000 0.00 0.00 0.00 5.36
5764 12934 6.179756 TCCATATACCATCATTGTACATGCC 58.820 40.000 0.00 0.00 0.00 4.40
5765 12935 7.870509 ATCCATATACCATCATTGTACATGC 57.129 36.000 0.00 0.00 0.00 4.06
5766 12936 9.889128 TGTATCCATATACCATCATTGTACATG 57.111 33.333 0.00 0.00 37.72 3.21
5771 12941 9.565090 GCATATGTATCCATATACCATCATTGT 57.435 33.333 4.29 0.00 41.35 2.71
5772 12942 9.006839 GGCATATGTATCCATATACCATCATTG 57.993 37.037 4.29 0.00 43.11 2.82
5773 12943 8.952602 AGGCATATGTATCCATATACCATCATT 58.047 33.333 9.55 0.00 44.86 2.57
5774 12944 8.515927 AGGCATATGTATCCATATACCATCAT 57.484 34.615 9.55 0.00 44.86 2.45
5775 12945 7.568366 TGAGGCATATGTATCCATATACCATCA 59.432 37.037 9.55 7.53 44.86 3.07
5776 12946 7.966812 TGAGGCATATGTATCCATATACCATC 58.033 38.462 9.55 5.63 44.86 3.51
5777 12947 7.936026 TGAGGCATATGTATCCATATACCAT 57.064 36.000 9.55 0.00 44.86 3.55
5778 12948 7.568366 TCATGAGGCATATGTATCCATATACCA 59.432 37.037 9.55 0.00 44.86 3.25
5779 12949 7.966812 TCATGAGGCATATGTATCCATATACC 58.033 38.462 4.29 0.22 43.61 2.73
5784 12954 9.758021 TTTTTATCATGAGGCATATGTATCCAT 57.242 29.630 0.09 1.04 34.97 3.41
5785 12955 9.234827 CTTTTTATCATGAGGCATATGTATCCA 57.765 33.333 0.09 0.00 0.00 3.41
5786 12956 9.236006 ACTTTTTATCATGAGGCATATGTATCC 57.764 33.333 0.09 0.00 0.00 2.59
5795 12965 8.469200 CCTCAAATTACTTTTTATCATGAGGCA 58.531 33.333 0.09 0.00 43.29 4.75
5796 12966 8.862550 CCTCAAATTACTTTTTATCATGAGGC 57.137 34.615 0.09 0.00 43.29 4.70
5835 13005 4.262420 GGTAGCTTGCATTTGGGAGAAAAA 60.262 41.667 0.00 0.00 0.00 1.94
5836 13006 3.258123 GGTAGCTTGCATTTGGGAGAAAA 59.742 43.478 0.00 0.00 0.00 2.29
5837 13007 2.825532 GGTAGCTTGCATTTGGGAGAAA 59.174 45.455 0.00 0.00 0.00 2.52
5838 13008 2.224992 TGGTAGCTTGCATTTGGGAGAA 60.225 45.455 0.00 0.00 0.00 2.87
5839 13009 1.354031 TGGTAGCTTGCATTTGGGAGA 59.646 47.619 0.00 0.00 0.00 3.71
5840 13010 1.474077 GTGGTAGCTTGCATTTGGGAG 59.526 52.381 0.00 0.00 0.00 4.30
5841 13011 1.075374 AGTGGTAGCTTGCATTTGGGA 59.925 47.619 0.00 0.00 0.00 4.37
5842 13012 1.549203 AGTGGTAGCTTGCATTTGGG 58.451 50.000 0.00 0.00 0.00 4.12
5843 13013 3.127548 CACTAGTGGTAGCTTGCATTTGG 59.872 47.826 15.49 0.00 0.00 3.28
5844 13014 4.002982 TCACTAGTGGTAGCTTGCATTTG 58.997 43.478 22.48 0.00 0.00 2.32
5845 13015 4.286297 TCACTAGTGGTAGCTTGCATTT 57.714 40.909 22.48 0.00 0.00 2.32
5846 13016 3.981071 TCACTAGTGGTAGCTTGCATT 57.019 42.857 22.48 0.00 0.00 3.56
5847 13017 3.600388 GTTCACTAGTGGTAGCTTGCAT 58.400 45.455 22.48 0.00 0.00 3.96
5848 13018 2.289444 GGTTCACTAGTGGTAGCTTGCA 60.289 50.000 22.48 0.00 0.00 4.08
5849 13019 2.028020 AGGTTCACTAGTGGTAGCTTGC 60.028 50.000 22.48 4.63 0.00 4.01
5850 13020 3.258372 TGAGGTTCACTAGTGGTAGCTTG 59.742 47.826 22.48 0.00 0.00 4.01
5851 13021 3.507411 TGAGGTTCACTAGTGGTAGCTT 58.493 45.455 22.48 2.95 0.00 3.74
5852 13022 3.170991 TGAGGTTCACTAGTGGTAGCT 57.829 47.619 22.48 22.34 0.00 3.32
5853 13023 4.473477 AATGAGGTTCACTAGTGGTAGC 57.527 45.455 22.48 18.54 0.00 3.58
5854 13024 7.406031 TCTTAATGAGGTTCACTAGTGGTAG 57.594 40.000 22.48 0.00 0.00 3.18
5855 13025 7.786046 TTCTTAATGAGGTTCACTAGTGGTA 57.214 36.000 22.48 8.64 0.00 3.25
5856 13026 6.681729 TTCTTAATGAGGTTCACTAGTGGT 57.318 37.500 22.48 5.42 0.00 4.16
5857 13027 9.319143 CTATTTCTTAATGAGGTTCACTAGTGG 57.681 37.037 22.48 4.59 0.00 4.00
5917 13087 9.157104 CAAAAGCTAAAAAGGTTGGAGTAAAAA 57.843 29.630 0.00 0.00 0.00 1.94
5918 13088 8.315482 ACAAAAGCTAAAAAGGTTGGAGTAAAA 58.685 29.630 0.00 0.00 0.00 1.52
5919 13089 7.842982 ACAAAAGCTAAAAAGGTTGGAGTAAA 58.157 30.769 0.00 0.00 0.00 2.01
5920 13090 7.122948 TGACAAAAGCTAAAAAGGTTGGAGTAA 59.877 33.333 0.00 0.00 0.00 2.24
5921 13091 6.603997 TGACAAAAGCTAAAAAGGTTGGAGTA 59.396 34.615 0.00 0.00 0.00 2.59
5922 13092 5.420739 TGACAAAAGCTAAAAAGGTTGGAGT 59.579 36.000 0.00 0.00 0.00 3.85
5923 13093 5.748630 GTGACAAAAGCTAAAAAGGTTGGAG 59.251 40.000 0.00 0.00 0.00 3.86
5924 13094 5.420739 AGTGACAAAAGCTAAAAAGGTTGGA 59.579 36.000 0.00 0.00 0.00 3.53
5925 13095 5.519927 CAGTGACAAAAGCTAAAAAGGTTGG 59.480 40.000 0.00 0.00 0.00 3.77
5926 13096 5.519927 CCAGTGACAAAAGCTAAAAAGGTTG 59.480 40.000 0.00 0.00 0.00 3.77
5927 13097 5.420739 TCCAGTGACAAAAGCTAAAAAGGTT 59.579 36.000 0.00 0.00 0.00 3.50
5928 13098 4.953579 TCCAGTGACAAAAGCTAAAAAGGT 59.046 37.500 0.00 0.00 0.00 3.50
5929 13099 5.514274 TCCAGTGACAAAAGCTAAAAAGG 57.486 39.130 0.00 0.00 0.00 3.11
5930 13100 5.853282 CGATCCAGTGACAAAAGCTAAAAAG 59.147 40.000 0.00 0.00 0.00 2.27
5931 13101 5.757886 CGATCCAGTGACAAAAGCTAAAAA 58.242 37.500 0.00 0.00 0.00 1.94
5932 13102 4.320202 GCGATCCAGTGACAAAAGCTAAAA 60.320 41.667 0.00 0.00 0.00 1.52
5933 13103 3.188460 GCGATCCAGTGACAAAAGCTAAA 59.812 43.478 0.00 0.00 0.00 1.85
5934 13104 2.742053 GCGATCCAGTGACAAAAGCTAA 59.258 45.455 0.00 0.00 0.00 3.09
5935 13105 2.346803 GCGATCCAGTGACAAAAGCTA 58.653 47.619 0.00 0.00 0.00 3.32
5936 13106 1.160137 GCGATCCAGTGACAAAAGCT 58.840 50.000 0.00 0.00 0.00 3.74
5937 13107 0.179215 CGCGATCCAGTGACAAAAGC 60.179 55.000 0.00 0.00 0.00 3.51
5938 13108 0.179215 GCGCGATCCAGTGACAAAAG 60.179 55.000 12.10 0.00 0.00 2.27
5939 13109 0.602638 AGCGCGATCCAGTGACAAAA 60.603 50.000 12.10 0.00 0.00 2.44
5940 13110 0.602638 AAGCGCGATCCAGTGACAAA 60.603 50.000 12.10 0.00 0.00 2.83
5941 13111 0.602638 AAAGCGCGATCCAGTGACAA 60.603 50.000 12.10 0.00 0.00 3.18
5942 13112 0.602638 AAAAGCGCGATCCAGTGACA 60.603 50.000 12.10 0.00 0.00 3.58
5943 13113 0.517316 AAAAAGCGCGATCCAGTGAC 59.483 50.000 12.10 0.00 0.00 3.67
5944 13114 0.796312 GAAAAAGCGCGATCCAGTGA 59.204 50.000 12.10 0.00 0.00 3.41
5945 13115 0.798776 AGAAAAAGCGCGATCCAGTG 59.201 50.000 12.10 0.00 0.00 3.66
5946 13116 1.079503 GAGAAAAAGCGCGATCCAGT 58.920 50.000 12.10 0.00 0.00 4.00
5947 13117 1.363744 AGAGAAAAAGCGCGATCCAG 58.636 50.000 12.10 0.00 0.00 3.86
5948 13118 1.732259 GAAGAGAAAAAGCGCGATCCA 59.268 47.619 12.10 0.00 0.00 3.41
5949 13119 1.732259 TGAAGAGAAAAAGCGCGATCC 59.268 47.619 12.10 0.00 0.00 3.36
5950 13120 3.455619 TTGAAGAGAAAAAGCGCGATC 57.544 42.857 12.10 0.00 0.00 3.69
5951 13121 3.003275 TGTTTGAAGAGAAAAAGCGCGAT 59.997 39.130 12.10 0.00 0.00 4.58
5952 13122 2.353269 TGTTTGAAGAGAAAAAGCGCGA 59.647 40.909 12.10 0.00 0.00 5.87
5953 13123 2.464016 GTGTTTGAAGAGAAAAAGCGCG 59.536 45.455 0.00 0.00 0.00 6.86
5954 13124 2.789339 GGTGTTTGAAGAGAAAAAGCGC 59.211 45.455 0.00 0.00 0.00 5.92
5955 13125 4.037690 CAGGTGTTTGAAGAGAAAAAGCG 58.962 43.478 0.00 0.00 0.00 4.68
5956 13126 3.798878 GCAGGTGTTTGAAGAGAAAAAGC 59.201 43.478 0.00 0.00 0.00 3.51
5957 13127 5.254339 AGCAGGTGTTTGAAGAGAAAAAG 57.746 39.130 0.00 0.00 0.00 2.27
5958 13128 5.394115 GGAAGCAGGTGTTTGAAGAGAAAAA 60.394 40.000 0.00 0.00 0.00 1.94
5959 13129 4.097892 GGAAGCAGGTGTTTGAAGAGAAAA 59.902 41.667 0.00 0.00 0.00 2.29
5960 13130 3.632145 GGAAGCAGGTGTTTGAAGAGAAA 59.368 43.478 0.00 0.00 0.00 2.52
5961 13131 3.117888 AGGAAGCAGGTGTTTGAAGAGAA 60.118 43.478 0.00 0.00 0.00 2.87
5962 13132 2.439507 AGGAAGCAGGTGTTTGAAGAGA 59.560 45.455 0.00 0.00 0.00 3.10
5963 13133 2.551459 CAGGAAGCAGGTGTTTGAAGAG 59.449 50.000 0.00 0.00 0.00 2.85
5964 13134 2.575532 CAGGAAGCAGGTGTTTGAAGA 58.424 47.619 0.00 0.00 0.00 2.87
5965 13135 1.610522 CCAGGAAGCAGGTGTTTGAAG 59.389 52.381 0.00 0.00 0.00 3.02
5966 13136 1.214175 TCCAGGAAGCAGGTGTTTGAA 59.786 47.619 0.00 0.00 0.00 2.69
5967 13137 0.843309 TCCAGGAAGCAGGTGTTTGA 59.157 50.000 0.00 0.00 0.00 2.69
5968 13138 1.691196 TTCCAGGAAGCAGGTGTTTG 58.309 50.000 0.00 0.00 0.00 2.93
5969 13139 2.310538 CTTTCCAGGAAGCAGGTGTTT 58.689 47.619 1.07 0.00 0.00 2.83
5970 13140 1.479389 CCTTTCCAGGAAGCAGGTGTT 60.479 52.381 10.85 0.00 44.19 3.32
5971 13141 0.111253 CCTTTCCAGGAAGCAGGTGT 59.889 55.000 10.85 0.00 44.19 4.16
5972 13142 2.952714 CCTTTCCAGGAAGCAGGTG 58.047 57.895 10.85 0.00 44.19 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.