Multiple sequence alignment - TraesCS6D01G194500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G194500 chr6D 100.000 6676 0 0 1 6676 270048767 270055442 0.000000e+00 12329.0
1 TraesCS6D01G194500 chr6D 87.313 134 12 4 12 144 178861597 178861468 1.500000e-31 148.0
2 TraesCS6D01G194500 chr6B 95.447 2899 80 26 1256 4124 422648663 422651539 0.000000e+00 4575.0
3 TraesCS6D01G194500 chr6B 95.103 1164 39 8 4610 5771 422651817 422652964 0.000000e+00 1818.0
4 TraesCS6D01G194500 chr6B 92.431 872 23 15 338 1194 422647799 422648642 0.000000e+00 1205.0
5 TraesCS6D01G194500 chr6B 89.342 882 43 19 5836 6676 422652988 422653859 0.000000e+00 1061.0
6 TraesCS6D01G194500 chr6B 89.831 59 1 3 130 187 676296880 676296934 3.340000e-08 71.3
7 TraesCS6D01G194500 chr6A 91.347 2473 138 39 1681 4106 387286012 387283569 0.000000e+00 3312.0
8 TraesCS6D01G194500 chr6A 93.841 2127 85 17 4579 6676 387283439 387281330 0.000000e+00 3160.0
9 TraesCS6D01G194500 chr6A 91.869 1279 56 15 421 1682 387287338 387286091 0.000000e+00 1742.0
10 TraesCS6D01G194500 chr6A 89.796 147 13 1 221 367 384549681 384549825 3.180000e-43 187.0
11 TraesCS6D01G194500 chr6A 85.821 134 15 3 12 144 232334340 232334210 9.030000e-29 139.0
12 TraesCS6D01G194500 chr1D 96.350 411 9 1 4171 4575 58619607 58619197 0.000000e+00 671.0
13 TraesCS6D01G194500 chr1D 79.621 211 26 5 12 220 203454032 203454227 1.170000e-27 135.0
14 TraesCS6D01G194500 chr1D 77.729 229 30 12 12 220 409313356 409313583 3.270000e-23 121.0
15 TraesCS6D01G194500 chr7D 93.990 416 20 3 4171 4582 610486824 610487238 5.680000e-175 625.0
16 TraesCS6D01G194500 chr7D 92.961 412 23 3 4170 4576 133690113 133690523 4.460000e-166 595.0
17 TraesCS6D01G194500 chr2A 94.250 400 22 1 4178 4577 469791901 469791503 1.590000e-170 610.0
18 TraesCS6D01G194500 chr2A 91.304 115 10 0 1976 2090 551252295 551252181 2.490000e-34 158.0
19 TraesCS6D01G194500 chr4D 93.431 411 23 1 4171 4577 509505366 509505776 2.060000e-169 606.0
20 TraesCS6D01G194500 chr4D 88.889 135 13 2 12 144 319269841 319269707 1.490000e-36 165.0
21 TraesCS6D01G194500 chr4D 81.132 212 32 7 12 219 41718228 41718021 5.360000e-36 163.0
22 TraesCS6D01G194500 chr2D 93.431 411 22 2 4170 4576 640367721 640367312 7.410000e-169 604.0
23 TraesCS6D01G194500 chr2D 93.220 413 21 3 4171 4577 10487888 10488299 9.580000e-168 601.0
24 TraesCS6D01G194500 chr2D 93.220 413 21 3 4171 4577 10505009 10505420 9.580000e-168 601.0
25 TraesCS6D01G194500 chr2D 92.806 417 21 4 4171 4581 497234349 497234762 4.460000e-166 595.0
26 TraesCS6D01G194500 chr2D 89.565 115 12 0 1976 2090 437675958 437676072 5.390000e-31 147.0
27 TraesCS6D01G194500 chr5D 81.527 406 35 13 5825 6212 445008347 445007964 1.410000e-76 298.0
28 TraesCS6D01G194500 chr1B 81.390 403 35 14 5828 6212 680994786 680995166 6.550000e-75 292.0
29 TraesCS6D01G194500 chr7A 80.052 386 38 14 5804 6173 658277862 658278224 4.000000e-62 250.0
30 TraesCS6D01G194500 chr7A 80.516 349 32 11 5874 6212 576774674 576774352 1.120000e-57 235.0
31 TraesCS6D01G194500 chr5B 81.132 212 35 4 14 222 470056312 470056103 1.490000e-36 165.0
32 TraesCS6D01G194500 chr4B 88.889 135 12 3 12 144 396716259 396716126 5.360000e-36 163.0
33 TraesCS6D01G194500 chr4B 83.893 149 17 6 14 158 572551363 572551508 1.170000e-27 135.0
34 TraesCS6D01G194500 chr2B 90.435 115 11 0 1976 2090 514030566 514030680 1.160000e-32 152.0
35 TraesCS6D01G194500 chr3D 85.401 137 14 6 12 144 607898041 607897907 3.250000e-28 137.0
36 TraesCS6D01G194500 chr3B 82.468 154 18 7 12 162 541513559 541513412 7.030000e-25 126.0
37 TraesCS6D01G194500 chr3B 93.023 43 3 0 130 172 223938102 223938144 5.590000e-06 63.9
38 TraesCS6D01G194500 chr1A 76.293 232 34 12 12 227 3115981 3115755 3.290000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G194500 chr6D 270048767 270055442 6675 False 12329.00 12329 100.000000 1 6676 1 chr6D.!!$F1 6675
1 TraesCS6D01G194500 chr6B 422647799 422653859 6060 False 2164.75 4575 93.080750 338 6676 4 chr6B.!!$F2 6338
2 TraesCS6D01G194500 chr6A 387281330 387287338 6008 True 2738.00 3312 92.352333 421 6676 3 chr6A.!!$R2 6255


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
287 288 0.108945 CCCCGAGACCGTAGTTCAAC 60.109 60.000 0.00 0.00 0.00 3.18 F
1103 1125 0.106819 AGCTTGTCATGGAGCCATCC 60.107 55.000 0.00 0.00 46.87 3.51 F
1427 1459 1.068895 CCATCTTGTGGTTGCTTTGCA 59.931 47.619 0.00 0.00 43.44 4.08 F
2233 2348 1.312815 GACCTGTTGTGAAGCTGCTT 58.687 50.000 15.92 15.92 0.00 3.91 F
3903 4076 1.134220 TCAAGCTTCCGTGGAAAGTGT 60.134 47.619 0.00 0.00 33.34 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1154 1176 0.401738 CCAGGAGAAGAAGGCCACAA 59.598 55.000 5.01 0.00 0.00 3.33 R
2595 2713 2.685388 TGACCGTGAATTTCTTGCACAA 59.315 40.909 0.00 0.00 32.96 3.33 R
2659 2777 2.858745 TGTAAAACAAGCACTCCCTCC 58.141 47.619 0.00 0.00 0.00 4.30 R
4184 4526 0.103937 CTCCATGAAGCTCGGTCTCC 59.896 60.000 0.00 0.00 0.00 3.71 R
5786 6197 0.388134 ACTCAAACGGGTGATCGTCG 60.388 55.000 0.00 1.51 43.07 5.12 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.444536 GGTATAAACCGATAAGTGCCACA 58.555 43.478 0.00 0.00 35.62 4.17
24 25 5.061179 GGTATAAACCGATAAGTGCCACAT 58.939 41.667 0.00 0.00 35.62 3.21
25 26 5.049680 GGTATAAACCGATAAGTGCCACATG 60.050 44.000 0.00 0.00 35.62 3.21
26 27 2.489938 AACCGATAAGTGCCACATGT 57.510 45.000 0.00 0.00 0.00 3.21
27 28 1.737838 ACCGATAAGTGCCACATGTG 58.262 50.000 19.31 19.31 0.00 3.21
28 29 1.003118 ACCGATAAGTGCCACATGTGT 59.997 47.619 23.79 8.06 0.00 3.72
29 30 1.398041 CCGATAAGTGCCACATGTGTG 59.602 52.381 23.79 15.96 45.23 3.82
38 39 1.081906 CACATGTGTGGCACGAAGC 60.082 57.895 18.03 3.88 42.10 3.86
47 48 2.049063 GCACGAAGCACTCCGACT 60.049 61.111 0.00 0.00 44.79 4.18
48 49 1.664965 GCACGAAGCACTCCGACTT 60.665 57.895 0.00 0.00 44.79 3.01
49 50 0.388134 GCACGAAGCACTCCGACTTA 60.388 55.000 0.00 0.00 44.79 2.24
50 51 1.933500 GCACGAAGCACTCCGACTTAA 60.934 52.381 0.00 0.00 44.79 1.85
51 52 1.719780 CACGAAGCACTCCGACTTAAC 59.280 52.381 0.00 0.00 0.00 2.01
52 53 0.982673 CGAAGCACTCCGACTTAACG 59.017 55.000 0.00 0.00 0.00 3.18
53 54 1.665161 CGAAGCACTCCGACTTAACGT 60.665 52.381 0.00 0.00 0.00 3.99
54 55 2.401351 GAAGCACTCCGACTTAACGTT 58.599 47.619 5.88 5.88 0.00 3.99
55 56 2.521105 AGCACTCCGACTTAACGTTT 57.479 45.000 5.91 0.00 0.00 3.60
56 57 2.830104 AGCACTCCGACTTAACGTTTT 58.170 42.857 5.91 0.00 0.00 2.43
57 58 3.200483 AGCACTCCGACTTAACGTTTTT 58.800 40.909 5.91 0.00 0.00 1.94
84 85 4.766404 ACTAAAGTTGCCATCCGAAAAG 57.234 40.909 0.00 0.00 0.00 2.27
85 86 4.394729 ACTAAAGTTGCCATCCGAAAAGA 58.605 39.130 0.00 0.00 0.00 2.52
86 87 4.825085 ACTAAAGTTGCCATCCGAAAAGAA 59.175 37.500 0.00 0.00 0.00 2.52
87 88 4.664150 AAAGTTGCCATCCGAAAAGAAA 57.336 36.364 0.00 0.00 0.00 2.52
88 89 4.664150 AAGTTGCCATCCGAAAAGAAAA 57.336 36.364 0.00 0.00 0.00 2.29
89 90 4.243007 AGTTGCCATCCGAAAAGAAAAG 57.757 40.909 0.00 0.00 0.00 2.27
90 91 3.888930 AGTTGCCATCCGAAAAGAAAAGA 59.111 39.130 0.00 0.00 0.00 2.52
91 92 3.915437 TGCCATCCGAAAAGAAAAGAC 57.085 42.857 0.00 0.00 0.00 3.01
92 93 3.218453 TGCCATCCGAAAAGAAAAGACA 58.782 40.909 0.00 0.00 0.00 3.41
93 94 3.634448 TGCCATCCGAAAAGAAAAGACAA 59.366 39.130 0.00 0.00 0.00 3.18
94 95 4.098654 TGCCATCCGAAAAGAAAAGACAAA 59.901 37.500 0.00 0.00 0.00 2.83
95 96 4.444388 GCCATCCGAAAAGAAAAGACAAAC 59.556 41.667 0.00 0.00 0.00 2.93
96 97 4.982295 CCATCCGAAAAGAAAAGACAAACC 59.018 41.667 0.00 0.00 0.00 3.27
97 98 4.642445 TCCGAAAAGAAAAGACAAACCC 57.358 40.909 0.00 0.00 0.00 4.11
98 99 3.382227 TCCGAAAAGAAAAGACAAACCCC 59.618 43.478 0.00 0.00 0.00 4.95
99 100 3.491964 CCGAAAAGAAAAGACAAACCCCC 60.492 47.826 0.00 0.00 0.00 5.40
100 101 3.131400 CGAAAAGAAAAGACAAACCCCCA 59.869 43.478 0.00 0.00 0.00 4.96
101 102 4.382147 CGAAAAGAAAAGACAAACCCCCAA 60.382 41.667 0.00 0.00 0.00 4.12
102 103 5.492895 GAAAAGAAAAGACAAACCCCCAAA 58.507 37.500 0.00 0.00 0.00 3.28
103 104 5.506730 AAAGAAAAGACAAACCCCCAAAA 57.493 34.783 0.00 0.00 0.00 2.44
104 105 5.506730 AAGAAAAGACAAACCCCCAAAAA 57.493 34.783 0.00 0.00 0.00 1.94
129 130 9.612066 AAAATTAAAACTTGCCATCTGAAAAGA 57.388 25.926 0.00 0.00 0.00 2.52
130 131 9.612066 AAATTAAAACTTGCCATCTGAAAAGAA 57.388 25.926 0.00 0.00 0.00 2.52
131 132 8.822652 ATTAAAACTTGCCATCTGAAAAGAAG 57.177 30.769 0.00 0.00 0.00 2.85
132 133 5.859205 AAACTTGCCATCTGAAAAGAAGT 57.141 34.783 0.00 0.00 0.00 3.01
133 134 5.859205 AACTTGCCATCTGAAAAGAAGTT 57.141 34.783 0.00 0.00 0.00 2.66
134 135 5.192327 ACTTGCCATCTGAAAAGAAGTTG 57.808 39.130 0.00 0.00 0.00 3.16
135 136 4.646492 ACTTGCCATCTGAAAAGAAGTTGT 59.354 37.500 0.00 0.00 0.00 3.32
136 137 4.836125 TGCCATCTGAAAAGAAGTTGTC 57.164 40.909 0.00 0.00 0.00 3.18
137 138 4.206375 TGCCATCTGAAAAGAAGTTGTCA 58.794 39.130 0.00 0.00 0.00 3.58
138 139 4.828939 TGCCATCTGAAAAGAAGTTGTCAT 59.171 37.500 0.00 0.00 0.00 3.06
139 140 5.048504 TGCCATCTGAAAAGAAGTTGTCATC 60.049 40.000 0.00 0.00 0.00 2.92
140 141 5.620879 GCCATCTGAAAAGAAGTTGTCATCC 60.621 44.000 0.00 0.00 0.00 3.51
141 142 5.709164 CCATCTGAAAAGAAGTTGTCATCCT 59.291 40.000 0.00 0.00 0.00 3.24
142 143 6.208204 CCATCTGAAAAGAAGTTGTCATCCTT 59.792 38.462 0.00 0.00 0.00 3.36
143 144 6.624352 TCTGAAAAGAAGTTGTCATCCTTG 57.376 37.500 0.00 0.00 0.00 3.61
144 145 5.009010 TCTGAAAAGAAGTTGTCATCCTTGC 59.991 40.000 0.00 0.00 0.00 4.01
145 146 3.904136 AAAGAAGTTGTCATCCTTGCG 57.096 42.857 0.00 0.00 0.00 4.85
146 147 2.550830 AGAAGTTGTCATCCTTGCGT 57.449 45.000 0.00 0.00 0.00 5.24
147 148 2.417719 AGAAGTTGTCATCCTTGCGTC 58.582 47.619 0.00 0.00 0.00 5.19
148 149 2.143122 GAAGTTGTCATCCTTGCGTCA 58.857 47.619 0.00 0.00 0.00 4.35
149 150 1.512926 AGTTGTCATCCTTGCGTCAC 58.487 50.000 0.00 0.00 0.00 3.67
150 151 1.070758 AGTTGTCATCCTTGCGTCACT 59.929 47.619 0.00 0.00 0.00 3.41
151 152 2.299013 AGTTGTCATCCTTGCGTCACTA 59.701 45.455 0.00 0.00 0.00 2.74
152 153 3.064207 GTTGTCATCCTTGCGTCACTAA 58.936 45.455 0.00 0.00 0.00 2.24
153 154 3.394674 TGTCATCCTTGCGTCACTAAA 57.605 42.857 0.00 0.00 0.00 1.85
154 155 3.064207 TGTCATCCTTGCGTCACTAAAC 58.936 45.455 0.00 0.00 0.00 2.01
155 156 3.244078 TGTCATCCTTGCGTCACTAAACT 60.244 43.478 0.00 0.00 0.00 2.66
156 157 3.746492 GTCATCCTTGCGTCACTAAACTT 59.254 43.478 0.00 0.00 0.00 2.66
157 158 3.745975 TCATCCTTGCGTCACTAAACTTG 59.254 43.478 0.00 0.00 0.00 3.16
158 159 1.871039 TCCTTGCGTCACTAAACTTGC 59.129 47.619 0.00 0.00 0.00 4.01
159 160 1.601903 CCTTGCGTCACTAAACTTGCA 59.398 47.619 0.00 0.00 0.00 4.08
160 161 2.032799 CCTTGCGTCACTAAACTTGCAA 59.967 45.455 0.00 0.00 39.73 4.08
161 162 3.304659 CCTTGCGTCACTAAACTTGCAAT 60.305 43.478 0.00 0.00 40.99 3.56
162 163 4.083537 CCTTGCGTCACTAAACTTGCAATA 60.084 41.667 0.00 0.00 40.99 1.90
163 164 5.425577 TTGCGTCACTAAACTTGCAATAA 57.574 34.783 0.00 0.00 37.41 1.40
164 165 5.425577 TGCGTCACTAAACTTGCAATAAA 57.574 34.783 0.00 0.00 0.00 1.40
165 166 5.822278 TGCGTCACTAAACTTGCAATAAAA 58.178 33.333 0.00 0.00 0.00 1.52
166 167 6.266323 TGCGTCACTAAACTTGCAATAAAAA 58.734 32.000 0.00 0.00 0.00 1.94
167 168 6.920758 TGCGTCACTAAACTTGCAATAAAAAT 59.079 30.769 0.00 0.00 0.00 1.82
168 169 7.436673 TGCGTCACTAAACTTGCAATAAAAATT 59.563 29.630 0.00 0.00 0.00 1.82
169 170 7.735586 GCGTCACTAAACTTGCAATAAAAATTG 59.264 33.333 0.00 0.00 34.79 2.32
170 171 8.751335 CGTCACTAAACTTGCAATAAAAATTGT 58.249 29.630 0.00 0.00 34.21 2.71
179 180 9.771915 ACTTGCAATAAAAATTGTTCAAAGTTG 57.228 25.926 0.00 0.00 34.21 3.16
180 181 9.771915 CTTGCAATAAAAATTGTTCAAAGTTGT 57.228 25.926 0.00 0.00 34.21 3.32
181 182 9.766277 TTGCAATAAAAATTGTTCAAAGTTGTC 57.234 25.926 0.00 0.00 34.21 3.18
182 183 8.939929 TGCAATAAAAATTGTTCAAAGTTGTCA 58.060 25.926 0.00 0.00 34.21 3.58
183 184 9.934190 GCAATAAAAATTGTTCAAAGTTGTCAT 57.066 25.926 0.57 0.00 34.21 3.06
187 188 7.903995 AAAATTGTTCAAAGTTGTCATGTGT 57.096 28.000 0.00 0.00 0.00 3.72
188 189 7.903995 AAATTGTTCAAAGTTGTCATGTGTT 57.096 28.000 0.00 0.00 0.00 3.32
189 190 7.524294 AATTGTTCAAAGTTGTCATGTGTTC 57.476 32.000 0.00 0.00 0.00 3.18
190 191 5.635417 TGTTCAAAGTTGTCATGTGTTCA 57.365 34.783 0.00 0.00 0.00 3.18
191 192 6.206395 TGTTCAAAGTTGTCATGTGTTCAT 57.794 33.333 0.00 0.00 34.21 2.57
192 193 6.629128 TGTTCAAAGTTGTCATGTGTTCATT 58.371 32.000 0.00 0.00 31.15 2.57
193 194 6.751425 TGTTCAAAGTTGTCATGTGTTCATTC 59.249 34.615 0.00 0.00 31.15 2.67
194 195 5.830912 TCAAAGTTGTCATGTGTTCATTCC 58.169 37.500 0.00 0.00 31.15 3.01
195 196 5.359292 TCAAAGTTGTCATGTGTTCATTCCA 59.641 36.000 0.00 0.00 31.15 3.53
196 197 4.836125 AGTTGTCATGTGTTCATTCCAC 57.164 40.909 0.00 0.00 31.15 4.02
197 198 4.206375 AGTTGTCATGTGTTCATTCCACA 58.794 39.130 0.00 0.00 46.03 4.17
198 199 4.036734 AGTTGTCATGTGTTCATTCCACAC 59.963 41.667 0.00 0.00 44.90 3.82
199 200 2.547634 TGTCATGTGTTCATTCCACACG 59.452 45.455 0.00 0.00 46.47 4.49
200 201 2.805671 GTCATGTGTTCATTCCACACGA 59.194 45.455 0.00 0.00 46.47 4.35
201 202 3.249799 GTCATGTGTTCATTCCACACGAA 59.750 43.478 0.00 0.00 46.47 3.85
202 203 4.071423 TCATGTGTTCATTCCACACGAAT 58.929 39.130 0.00 0.00 46.47 3.34
213 214 4.529109 TCCACACGAATGTCACTTATCA 57.471 40.909 0.00 0.00 36.72 2.15
214 215 4.494484 TCCACACGAATGTCACTTATCAG 58.506 43.478 0.00 0.00 36.72 2.90
215 216 4.219725 TCCACACGAATGTCACTTATCAGA 59.780 41.667 0.00 0.00 36.72 3.27
216 217 4.564372 CCACACGAATGTCACTTATCAGAG 59.436 45.833 0.00 0.00 36.72 3.35
217 218 5.164233 CACACGAATGTCACTTATCAGAGT 58.836 41.667 0.00 0.00 36.72 3.24
218 219 5.287274 CACACGAATGTCACTTATCAGAGTC 59.713 44.000 0.00 0.00 36.72 3.36
219 220 4.800993 CACGAATGTCACTTATCAGAGTCC 59.199 45.833 0.00 0.00 0.00 3.85
220 221 4.707448 ACGAATGTCACTTATCAGAGTCCT 59.293 41.667 0.00 0.00 0.00 3.85
221 222 5.886474 ACGAATGTCACTTATCAGAGTCCTA 59.114 40.000 0.00 0.00 0.00 2.94
222 223 6.547880 ACGAATGTCACTTATCAGAGTCCTAT 59.452 38.462 0.00 0.00 0.00 2.57
223 224 7.081349 CGAATGTCACTTATCAGAGTCCTATC 58.919 42.308 0.00 0.00 0.00 2.08
224 225 7.040755 CGAATGTCACTTATCAGAGTCCTATCT 60.041 40.741 0.00 0.00 0.00 1.98
225 226 8.546083 AATGTCACTTATCAGAGTCCTATCTT 57.454 34.615 0.00 0.00 0.00 2.40
226 227 9.647918 AATGTCACTTATCAGAGTCCTATCTTA 57.352 33.333 0.00 0.00 0.00 2.10
227 228 8.684386 TGTCACTTATCAGAGTCCTATCTTAG 57.316 38.462 0.00 0.00 0.00 2.18
228 229 8.275758 TGTCACTTATCAGAGTCCTATCTTAGT 58.724 37.037 0.00 0.00 0.00 2.24
229 230 8.780249 GTCACTTATCAGAGTCCTATCTTAGTC 58.220 40.741 0.00 0.00 0.00 2.59
230 231 8.495260 TCACTTATCAGAGTCCTATCTTAGTCA 58.505 37.037 0.00 0.00 0.00 3.41
231 232 9.126151 CACTTATCAGAGTCCTATCTTAGTCAA 57.874 37.037 0.00 0.00 0.00 3.18
232 233 9.702253 ACTTATCAGAGTCCTATCTTAGTCAAA 57.298 33.333 0.00 0.00 0.00 2.69
235 236 7.962995 TCAGAGTCCTATCTTAGTCAAATGT 57.037 36.000 0.00 0.00 0.00 2.71
236 237 9.647918 ATCAGAGTCCTATCTTAGTCAAATGTA 57.352 33.333 0.00 0.00 0.00 2.29
237 238 9.126151 TCAGAGTCCTATCTTAGTCAAATGTAG 57.874 37.037 0.00 0.00 0.00 2.74
238 239 8.356657 CAGAGTCCTATCTTAGTCAAATGTAGG 58.643 40.741 0.00 0.00 0.00 3.18
239 240 8.062536 AGAGTCCTATCTTAGTCAAATGTAGGT 58.937 37.037 0.00 0.00 31.09 3.08
240 241 8.012957 AGTCCTATCTTAGTCAAATGTAGGTG 57.987 38.462 0.00 0.00 31.09 4.00
241 242 6.702282 GTCCTATCTTAGTCAAATGTAGGTGC 59.298 42.308 0.00 0.00 31.09 5.01
242 243 5.992217 CCTATCTTAGTCAAATGTAGGTGCC 59.008 44.000 0.00 0.00 0.00 5.01
243 244 4.901197 TCTTAGTCAAATGTAGGTGCCA 57.099 40.909 0.00 0.00 0.00 4.92
244 245 4.832248 TCTTAGTCAAATGTAGGTGCCAG 58.168 43.478 0.00 0.00 0.00 4.85
245 246 1.826385 AGTCAAATGTAGGTGCCAGC 58.174 50.000 0.00 0.00 0.00 4.85
246 247 1.073763 AGTCAAATGTAGGTGCCAGCA 59.926 47.619 0.00 0.00 0.00 4.41
247 248 1.200020 GTCAAATGTAGGTGCCAGCAC 59.800 52.381 14.39 14.39 45.49 4.40
257 258 2.531522 GTGCCAGCACCAAATTCTTT 57.468 45.000 11.77 0.00 40.79 2.52
258 259 2.837498 GTGCCAGCACCAAATTCTTTT 58.163 42.857 11.77 0.00 40.79 2.27
259 260 3.205338 GTGCCAGCACCAAATTCTTTTT 58.795 40.909 11.77 0.00 40.79 1.94
278 279 2.460757 TTTCTTTTACCCCGAGACCG 57.539 50.000 0.00 0.00 0.00 4.79
279 280 1.341080 TTCTTTTACCCCGAGACCGT 58.659 50.000 0.00 0.00 0.00 4.83
280 281 2.214376 TCTTTTACCCCGAGACCGTA 57.786 50.000 0.00 0.00 0.00 4.02
281 282 2.094675 TCTTTTACCCCGAGACCGTAG 58.905 52.381 0.00 0.00 0.00 3.51
282 283 1.821136 CTTTTACCCCGAGACCGTAGT 59.179 52.381 0.00 0.00 0.00 2.73
283 284 1.923356 TTTACCCCGAGACCGTAGTT 58.077 50.000 0.00 0.00 0.00 2.24
284 285 1.463674 TTACCCCGAGACCGTAGTTC 58.536 55.000 0.00 0.00 0.00 3.01
285 286 0.327924 TACCCCGAGACCGTAGTTCA 59.672 55.000 0.00 0.00 0.00 3.18
286 287 0.540365 ACCCCGAGACCGTAGTTCAA 60.540 55.000 0.00 0.00 0.00 2.69
287 288 0.108945 CCCCGAGACCGTAGTTCAAC 60.109 60.000 0.00 0.00 0.00 3.18
288 289 0.455633 CCCGAGACCGTAGTTCAACG 60.456 60.000 0.00 0.00 42.49 4.10
298 299 3.879427 CGTAGTTCAACGGCAATTTTCA 58.121 40.909 0.00 0.00 39.19 2.69
299 300 3.662186 CGTAGTTCAACGGCAATTTTCAC 59.338 43.478 0.00 0.00 39.19 3.18
300 301 3.092334 AGTTCAACGGCAATTTTCACC 57.908 42.857 0.00 0.00 0.00 4.02
301 302 2.428890 AGTTCAACGGCAATTTTCACCA 59.571 40.909 0.00 0.00 0.00 4.17
302 303 3.118956 AGTTCAACGGCAATTTTCACCAA 60.119 39.130 0.00 0.00 0.00 3.67
303 304 3.742433 TCAACGGCAATTTTCACCAAT 57.258 38.095 0.00 0.00 0.00 3.16
304 305 4.065321 TCAACGGCAATTTTCACCAATT 57.935 36.364 0.00 0.00 0.00 2.32
305 306 5.201713 TCAACGGCAATTTTCACCAATTA 57.798 34.783 0.00 0.00 0.00 1.40
306 307 5.601662 TCAACGGCAATTTTCACCAATTAA 58.398 33.333 0.00 0.00 0.00 1.40
307 308 6.049149 TCAACGGCAATTTTCACCAATTAAA 58.951 32.000 0.00 0.00 0.00 1.52
308 309 6.538742 TCAACGGCAATTTTCACCAATTAAAA 59.461 30.769 0.00 0.00 0.00 1.52
309 310 6.538189 ACGGCAATTTTCACCAATTAAAAG 57.462 33.333 0.00 0.00 0.00 2.27
310 311 6.052360 ACGGCAATTTTCACCAATTAAAAGT 58.948 32.000 0.00 0.00 0.00 2.66
311 312 6.540551 ACGGCAATTTTCACCAATTAAAAGTT 59.459 30.769 0.00 0.00 0.00 2.66
312 313 7.711339 ACGGCAATTTTCACCAATTAAAAGTTA 59.289 29.630 0.00 0.00 0.00 2.24
313 314 8.716909 CGGCAATTTTCACCAATTAAAAGTTAT 58.283 29.630 0.00 0.00 0.00 1.89
314 315 9.824534 GGCAATTTTCACCAATTAAAAGTTATG 57.175 29.630 0.00 0.00 0.00 1.90
331 332 9.787435 AAAAGTTATGTACATACAAGGACAAGA 57.213 29.630 15.20 0.00 39.99 3.02
332 333 9.436957 AAAGTTATGTACATACAAGGACAAGAG 57.563 33.333 15.20 0.00 39.99 2.85
333 334 7.042335 AGTTATGTACATACAAGGACAAGAGC 58.958 38.462 15.20 0.00 39.99 4.09
334 335 4.882842 TGTACATACAAGGACAAGAGCA 57.117 40.909 0.00 0.00 32.40 4.26
335 336 4.566004 TGTACATACAAGGACAAGAGCAC 58.434 43.478 0.00 0.00 32.40 4.40
336 337 3.059352 ACATACAAGGACAAGAGCACC 57.941 47.619 0.00 0.00 0.00 5.01
403 404 5.125100 TCCAGTAGTACGTACAAACTTGG 57.875 43.478 26.55 25.12 33.55 3.61
443 444 2.594654 CAGAAGTACGCACGAATCTGTC 59.405 50.000 0.00 0.00 33.64 3.51
457 458 1.795768 TCTGTCTGACCATTCGTTGC 58.204 50.000 5.17 0.00 0.00 4.17
461 462 1.303236 CTGACCATTCGTTGCCCCA 60.303 57.895 0.00 0.00 0.00 4.96
518 519 2.233271 CCACCAGCAAACAATCTGAGT 58.767 47.619 0.00 0.00 32.26 3.41
534 535 4.718961 TCTGAGTTCCTTTCCTTTTCCAG 58.281 43.478 0.00 0.00 0.00 3.86
583 584 2.282745 GCAGCCCCAAGAGCAAGT 60.283 61.111 0.00 0.00 0.00 3.16
600 601 2.230130 AGTAACCTCTGCTCTGCTCT 57.770 50.000 0.00 0.00 0.00 4.09
601 602 1.824230 AGTAACCTCTGCTCTGCTCTG 59.176 52.381 0.00 0.00 0.00 3.35
602 603 0.534412 TAACCTCTGCTCTGCTCTGC 59.466 55.000 0.00 0.00 0.00 4.26
604 605 1.142314 CCTCTGCTCTGCTCTGCTC 59.858 63.158 0.00 0.00 0.00 4.26
605 606 1.142314 CTCTGCTCTGCTCTGCTCC 59.858 63.158 0.00 0.00 0.00 4.70
606 607 1.605971 CTCTGCTCTGCTCTGCTCCA 61.606 60.000 0.00 0.00 0.00 3.86
607 608 1.153529 CTGCTCTGCTCTGCTCCAG 60.154 63.158 0.00 0.00 0.00 3.86
608 609 2.512057 GCTCTGCTCTGCTCCAGC 60.512 66.667 0.00 0.00 42.50 4.85
609 610 3.021473 GCTCTGCTCTGCTCCAGCT 62.021 63.158 0.00 0.00 42.66 4.24
610 611 1.153529 CTCTGCTCTGCTCCAGCTG 60.154 63.158 6.78 6.78 42.66 4.24
611 612 2.820479 CTGCTCTGCTCCAGCTGC 60.820 66.667 8.66 0.00 42.66 5.25
612 613 4.405671 TGCTCTGCTCCAGCTGCC 62.406 66.667 8.66 0.00 42.66 4.85
613 614 4.098722 GCTCTGCTCCAGCTGCCT 62.099 66.667 8.66 0.00 42.66 4.75
614 615 2.187424 CTCTGCTCCAGCTGCCTC 59.813 66.667 8.66 0.00 42.66 4.70
615 616 3.388703 CTCTGCTCCAGCTGCCTCC 62.389 68.421 8.66 0.00 42.66 4.30
616 617 4.486503 CTGCTCCAGCTGCCTCCC 62.487 72.222 8.66 0.00 42.66 4.30
618 619 4.173924 GCTCCAGCTGCCTCCCTC 62.174 72.222 8.66 0.00 38.21 4.30
628 629 3.039526 CCTCCCTCCCTCCCTCCT 61.040 72.222 0.00 0.00 0.00 3.69
655 656 3.710677 AGTGGCTTAGCATCAGATTCTCT 59.289 43.478 6.53 0.00 0.00 3.10
656 657 4.898265 AGTGGCTTAGCATCAGATTCTCTA 59.102 41.667 6.53 0.00 0.00 2.43
657 658 5.543405 AGTGGCTTAGCATCAGATTCTCTAT 59.457 40.000 6.53 0.00 0.00 1.98
658 659 5.868801 GTGGCTTAGCATCAGATTCTCTATC 59.131 44.000 6.53 0.00 0.00 2.08
659 660 5.779260 TGGCTTAGCATCAGATTCTCTATCT 59.221 40.000 6.53 0.00 44.60 1.98
660 661 6.071447 TGGCTTAGCATCAGATTCTCTATCTC 60.071 42.308 6.53 0.00 41.78 2.75
661 662 6.153340 GGCTTAGCATCAGATTCTCTATCTCT 59.847 42.308 6.53 0.00 41.78 3.10
662 663 7.253422 GCTTAGCATCAGATTCTCTATCTCTC 58.747 42.308 0.00 0.00 41.78 3.20
663 664 7.121759 GCTTAGCATCAGATTCTCTATCTCTCT 59.878 40.741 0.00 0.00 41.78 3.10
664 665 8.565896 TTAGCATCAGATTCTCTATCTCTCTC 57.434 38.462 0.00 0.00 41.78 3.20
670 671 7.674120 TCAGATTCTCTATCTCTCTCTCTCTG 58.326 42.308 0.00 0.00 41.78 3.35
764 778 1.623811 TGCTAGTTTTCTCGCTTCCCT 59.376 47.619 0.00 0.00 39.05 4.20
973 987 1.163554 CTTCCTGGAAGCAAGCTCAC 58.836 55.000 22.55 0.00 32.78 3.51
1002 1024 3.953712 TCTCATTCTTCTGTTGCCGTA 57.046 42.857 0.00 0.00 0.00 4.02
1015 1037 1.226295 GCCGTATTGCCAAGTTCGC 60.226 57.895 0.00 0.00 0.00 4.70
1027 1049 0.392060 AAGTTCGCGGGGTTGGATAC 60.392 55.000 6.13 0.00 0.00 2.24
1070 1092 2.503895 ACAAAGGGATTGAGCAGAGG 57.496 50.000 0.00 0.00 41.85 3.69
1103 1125 0.106819 AGCTTGTCATGGAGCCATCC 60.107 55.000 0.00 0.00 46.87 3.51
1154 1176 3.068732 GCTTCAAGTTCTTGCCCTTCTTT 59.931 43.478 7.58 0.00 0.00 2.52
1240 1272 6.169557 TCACTTTGCTGTCCTAAGAAAGTA 57.830 37.500 0.00 0.00 35.59 2.24
1241 1273 5.989777 TCACTTTGCTGTCCTAAGAAAGTAC 59.010 40.000 0.00 0.00 35.59 2.73
1242 1274 5.992217 CACTTTGCTGTCCTAAGAAAGTACT 59.008 40.000 0.00 0.00 35.59 2.73
1243 1275 6.146347 CACTTTGCTGTCCTAAGAAAGTACTC 59.854 42.308 0.00 0.00 35.59 2.59
1244 1276 4.803098 TGCTGTCCTAAGAAAGTACTCC 57.197 45.455 0.00 0.00 28.99 3.85
1245 1277 4.417437 TGCTGTCCTAAGAAAGTACTCCT 58.583 43.478 0.00 0.00 28.99 3.69
1427 1459 1.068895 CCATCTTGTGGTTGCTTTGCA 59.931 47.619 0.00 0.00 43.44 4.08
1436 1468 2.278854 GGTTGCTTTGCATGTGTTGTT 58.721 42.857 0.00 0.00 38.76 2.83
1447 1479 3.652274 CATGTGTTGTTTTGATCACCCC 58.348 45.455 0.00 0.00 0.00 4.95
1452 1484 3.315749 TGTTGTTTTGATCACCCCGTTAC 59.684 43.478 0.00 0.00 0.00 2.50
1797 1909 6.238484 GCGATATAACTGATTGATATTGGCCC 60.238 42.308 0.00 0.00 0.00 5.80
1847 1959 8.718102 TCAAAGGAAAGATATGTAACTGTAGC 57.282 34.615 0.00 0.00 0.00 3.58
2058 2173 3.334581 TCTGGGATTATGGCCTATGCATT 59.665 43.478 3.54 0.00 40.13 3.56
2099 2214 3.461061 CATCATCAGGTAGCGTTCACAT 58.539 45.455 0.00 0.00 0.00 3.21
2233 2348 1.312815 GACCTGTTGTGAAGCTGCTT 58.687 50.000 15.92 15.92 0.00 3.91
2371 2486 4.127171 CACTCGGTGAAGGAAAAGAAAGA 58.873 43.478 0.00 0.00 35.23 2.52
2532 2649 8.156820 TGTGGATTATGCTATGCAAAGTAGTAT 58.843 33.333 0.00 0.00 43.62 2.12
2803 2921 7.201911 CCTTGCATATATGGATGATCTACGGTA 60.202 40.741 18.13 0.00 0.00 4.02
2855 2973 6.215845 TGAAATAAGGTTTGCTTGCTTCTTC 58.784 36.000 0.00 0.00 0.00 2.87
3262 3425 7.990917 TGCACAAATTCAAACAGTTAACTCTA 58.009 30.769 4.77 0.00 0.00 2.43
3538 3701 1.517257 CAGTGTTCCTCTAGGCGCG 60.517 63.158 0.00 0.00 34.44 6.86
3640 3810 1.803334 GTATCAACGGTGAAGCCACA 58.197 50.000 7.51 0.00 44.93 4.17
3662 3832 1.974236 AGCTTACTCCTGCAGTCTTGT 59.026 47.619 13.81 8.02 36.43 3.16
3819 3989 8.716674 ATTCCATATTGCATTATTCTCCTTGT 57.283 30.769 0.00 0.00 0.00 3.16
3839 4010 6.209391 CCTTGTGTTGTCCCTTCTGAATAAAT 59.791 38.462 0.00 0.00 0.00 1.40
3903 4076 1.134220 TCAAGCTTCCGTGGAAAGTGT 60.134 47.619 0.00 0.00 33.34 3.55
4064 4241 5.574891 TTTTTACTGTGTTCACTGCACAT 57.425 34.783 9.17 0.00 44.54 3.21
4065 4242 6.685527 TTTTTACTGTGTTCACTGCACATA 57.314 33.333 9.17 0.00 44.54 2.29
4070 4247 5.522456 ACTGTGTTCACTGCACATATTTTG 58.478 37.500 9.17 0.00 44.54 2.44
4077 4254 4.983538 TCACTGCACATATTTTGTTTGCTG 59.016 37.500 0.00 0.00 36.00 4.41
4084 4263 6.456718 GCACATATTTTGTTTGCTGTTGTTGT 60.457 34.615 0.00 0.00 36.00 3.32
4086 4265 8.598924 CACATATTTTGTTTGCTGTTGTTGTTA 58.401 29.630 0.00 0.00 36.00 2.41
4163 4505 8.407832 GCCTGTTTTAGACTTTTAAAGGTTACA 58.592 33.333 9.64 4.45 0.00 2.41
4169 4511 9.738832 TTTAGACTTTTAAAGGTTACATTGTGC 57.261 29.630 9.64 0.00 0.00 4.57
4170 4512 6.435428 AGACTTTTAAAGGTTACATTGTGCG 58.565 36.000 9.64 0.00 0.00 5.34
4171 4513 6.261381 AGACTTTTAAAGGTTACATTGTGCGA 59.739 34.615 9.64 0.00 0.00 5.10
4172 4514 6.435428 ACTTTTAAAGGTTACATTGTGCGAG 58.565 36.000 9.64 0.00 0.00 5.03
4173 4515 6.038936 ACTTTTAAAGGTTACATTGTGCGAGT 59.961 34.615 9.64 0.00 0.00 4.18
4174 4516 7.227116 ACTTTTAAAGGTTACATTGTGCGAGTA 59.773 33.333 9.64 0.00 0.00 2.59
4175 4517 6.715344 TTAAAGGTTACATTGTGCGAGTAG 57.285 37.500 0.00 0.00 0.00 2.57
4176 4518 4.530710 AAGGTTACATTGTGCGAGTAGA 57.469 40.909 0.00 0.00 0.00 2.59
4177 4519 4.111375 AGGTTACATTGTGCGAGTAGAG 57.889 45.455 0.00 0.00 0.00 2.43
4178 4520 2.603560 GGTTACATTGTGCGAGTAGAGC 59.396 50.000 0.00 0.00 0.00 4.09
4179 4521 3.250744 GTTACATTGTGCGAGTAGAGCA 58.749 45.455 0.00 0.00 42.99 4.26
4180 4522 2.680312 ACATTGTGCGAGTAGAGCAT 57.320 45.000 0.00 0.00 46.96 3.79
4181 4523 2.977914 ACATTGTGCGAGTAGAGCATT 58.022 42.857 0.00 0.00 46.96 3.56
4182 4524 3.338249 ACATTGTGCGAGTAGAGCATTT 58.662 40.909 0.00 0.00 46.96 2.32
4183 4525 3.753272 ACATTGTGCGAGTAGAGCATTTT 59.247 39.130 0.00 0.00 46.96 1.82
4184 4526 3.811722 TTGTGCGAGTAGAGCATTTTG 57.188 42.857 0.00 0.00 46.96 2.44
4185 4527 2.076100 TGTGCGAGTAGAGCATTTTGG 58.924 47.619 0.00 0.00 46.96 3.28
4186 4528 2.289382 TGTGCGAGTAGAGCATTTTGGA 60.289 45.455 0.00 0.00 46.96 3.53
4187 4529 2.349886 GTGCGAGTAGAGCATTTTGGAG 59.650 50.000 0.00 0.00 46.96 3.86
4188 4530 2.233676 TGCGAGTAGAGCATTTTGGAGA 59.766 45.455 0.00 0.00 40.01 3.71
4189 4531 2.605366 GCGAGTAGAGCATTTTGGAGAC 59.395 50.000 0.00 0.00 34.19 3.36
4190 4532 3.190874 CGAGTAGAGCATTTTGGAGACC 58.809 50.000 0.00 0.00 0.00 3.85
4191 4533 3.190874 GAGTAGAGCATTTTGGAGACCG 58.809 50.000 0.00 0.00 0.00 4.79
4192 4534 2.832129 AGTAGAGCATTTTGGAGACCGA 59.168 45.455 0.00 0.00 0.00 4.69
4193 4535 2.393271 AGAGCATTTTGGAGACCGAG 57.607 50.000 0.00 0.00 0.00 4.63
4194 4536 0.729690 GAGCATTTTGGAGACCGAGC 59.270 55.000 0.00 0.00 0.00 5.03
4195 4537 0.326264 AGCATTTTGGAGACCGAGCT 59.674 50.000 0.00 0.00 0.00 4.09
4196 4538 1.168714 GCATTTTGGAGACCGAGCTT 58.831 50.000 0.00 0.00 0.00 3.74
4197 4539 1.131315 GCATTTTGGAGACCGAGCTTC 59.869 52.381 0.00 0.00 0.00 3.86
4198 4540 2.426522 CATTTTGGAGACCGAGCTTCA 58.573 47.619 0.00 0.00 0.00 3.02
4199 4541 2.859165 TTTTGGAGACCGAGCTTCAT 57.141 45.000 0.00 0.00 0.00 2.57
4200 4542 2.099141 TTTGGAGACCGAGCTTCATG 57.901 50.000 0.00 0.00 0.00 3.07
4201 4543 0.250234 TTGGAGACCGAGCTTCATGG 59.750 55.000 0.00 0.00 0.00 3.66
4202 4544 0.614697 TGGAGACCGAGCTTCATGGA 60.615 55.000 0.00 0.00 0.00 3.41
4203 4545 0.103937 GGAGACCGAGCTTCATGGAG 59.896 60.000 0.00 0.00 0.00 3.86
4204 4546 0.529555 GAGACCGAGCTTCATGGAGC 60.530 60.000 19.03 19.03 43.02 4.70
4205 4547 1.522580 GACCGAGCTTCATGGAGCC 60.523 63.158 22.85 12.83 43.74 4.70
4206 4548 2.203126 CCGAGCTTCATGGAGCCC 60.203 66.667 22.85 10.30 43.74 5.19
4207 4549 2.739996 CCGAGCTTCATGGAGCCCT 61.740 63.158 22.85 4.70 43.74 5.19
4208 4550 1.222936 CGAGCTTCATGGAGCCCTT 59.777 57.895 22.85 3.85 43.74 3.95
4209 4551 0.393537 CGAGCTTCATGGAGCCCTTT 60.394 55.000 22.85 3.43 43.74 3.11
4210 4552 1.134401 CGAGCTTCATGGAGCCCTTTA 60.134 52.381 22.85 0.00 43.74 1.85
4211 4553 2.486191 CGAGCTTCATGGAGCCCTTTAT 60.486 50.000 22.85 2.16 43.74 1.40
4212 4554 3.560105 GAGCTTCATGGAGCCCTTTATT 58.440 45.455 22.85 1.33 43.74 1.40
4213 4555 3.956848 GAGCTTCATGGAGCCCTTTATTT 59.043 43.478 22.85 0.49 43.74 1.40
4214 4556 4.356436 AGCTTCATGGAGCCCTTTATTTT 58.644 39.130 22.85 0.00 43.74 1.82
4215 4557 4.161001 AGCTTCATGGAGCCCTTTATTTTG 59.839 41.667 22.85 0.00 43.74 2.44
4216 4558 4.160252 GCTTCATGGAGCCCTTTATTTTGA 59.840 41.667 15.77 0.00 36.66 2.69
4217 4559 5.337491 GCTTCATGGAGCCCTTTATTTTGAA 60.337 40.000 15.77 0.00 36.66 2.69
4218 4560 6.678568 TTCATGGAGCCCTTTATTTTGAAA 57.321 33.333 0.00 0.00 0.00 2.69
4219 4561 6.678568 TCATGGAGCCCTTTATTTTGAAAA 57.321 33.333 0.00 0.00 0.00 2.29
4220 4562 7.072263 TCATGGAGCCCTTTATTTTGAAAAA 57.928 32.000 0.00 0.00 0.00 1.94
4221 4563 7.688343 TCATGGAGCCCTTTATTTTGAAAAAT 58.312 30.769 6.29 6.29 41.24 1.82
4222 4564 8.162746 TCATGGAGCCCTTTATTTTGAAAAATT 58.837 29.630 6.34 0.00 39.24 1.82
4223 4565 7.977789 TGGAGCCCTTTATTTTGAAAAATTC 57.022 32.000 6.34 0.00 39.24 2.17
4224 4566 7.512992 TGGAGCCCTTTATTTTGAAAAATTCA 58.487 30.769 6.34 0.00 39.24 2.57
4284 4626 8.706492 AAAAATTACACATGTATGCAAGGATG 57.294 30.769 0.00 0.00 0.00 3.51
4285 4627 7.408756 AAATTACACATGTATGCAAGGATGT 57.591 32.000 0.00 0.00 0.00 3.06
4286 4628 8.518430 AAATTACACATGTATGCAAGGATGTA 57.482 30.769 0.00 2.28 0.00 2.29
4287 4629 8.518430 AATTACACATGTATGCAAGGATGTAA 57.482 30.769 0.00 11.55 36.16 2.41
4288 4630 7.929941 TTACACATGTATGCAAGGATGTAAA 57.070 32.000 0.00 3.99 30.53 2.01
4289 4631 6.441093 ACACATGTATGCAAGGATGTAAAG 57.559 37.500 0.00 0.66 0.00 1.85
4290 4632 5.945784 ACACATGTATGCAAGGATGTAAAGT 59.054 36.000 0.00 1.15 0.00 2.66
4291 4633 6.127925 ACACATGTATGCAAGGATGTAAAGTG 60.128 38.462 0.00 0.00 0.00 3.16
4292 4634 5.945784 ACATGTATGCAAGGATGTAAAGTGT 59.054 36.000 0.00 0.00 0.00 3.55
4293 4635 7.065683 CACATGTATGCAAGGATGTAAAGTGTA 59.934 37.037 0.00 0.00 0.00 2.90
4294 4636 7.775093 ACATGTATGCAAGGATGTAAAGTGTAT 59.225 33.333 0.00 0.00 0.00 2.29
4295 4637 7.552458 TGTATGCAAGGATGTAAAGTGTATG 57.448 36.000 0.00 0.00 0.00 2.39
4296 4638 7.109501 TGTATGCAAGGATGTAAAGTGTATGT 58.890 34.615 0.00 0.00 0.00 2.29
4297 4639 5.878332 TGCAAGGATGTAAAGTGTATGTG 57.122 39.130 0.00 0.00 0.00 3.21
4298 4640 5.312895 TGCAAGGATGTAAAGTGTATGTGT 58.687 37.500 0.00 0.00 0.00 3.72
4299 4641 5.181056 TGCAAGGATGTAAAGTGTATGTGTG 59.819 40.000 0.00 0.00 0.00 3.82
4300 4642 5.411361 GCAAGGATGTAAAGTGTATGTGTGA 59.589 40.000 0.00 0.00 0.00 3.58
4301 4643 6.072728 GCAAGGATGTAAAGTGTATGTGTGAA 60.073 38.462 0.00 0.00 0.00 3.18
4302 4644 7.521423 GCAAGGATGTAAAGTGTATGTGTGAAA 60.521 37.037 0.00 0.00 0.00 2.69
4303 4645 8.349245 CAAGGATGTAAAGTGTATGTGTGAAAA 58.651 33.333 0.00 0.00 0.00 2.29
4304 4646 8.635765 AGGATGTAAAGTGTATGTGTGAAAAT 57.364 30.769 0.00 0.00 0.00 1.82
4305 4647 9.077885 AGGATGTAAAGTGTATGTGTGAAAATT 57.922 29.630 0.00 0.00 0.00 1.82
4306 4648 9.691362 GGATGTAAAGTGTATGTGTGAAAATTT 57.309 29.630 0.00 0.00 0.00 1.82
4311 4653 8.647143 AAAGTGTATGTGTGAAAATTTTCAGG 57.353 30.769 29.34 0.00 46.80 3.86
4312 4654 7.581213 AGTGTATGTGTGAAAATTTTCAGGA 57.419 32.000 29.34 18.15 46.80 3.86
4313 4655 8.181904 AGTGTATGTGTGAAAATTTTCAGGAT 57.818 30.769 29.34 22.21 46.80 3.24
4314 4656 8.084073 AGTGTATGTGTGAAAATTTTCAGGATG 58.916 33.333 29.34 0.00 46.80 3.51
4315 4657 8.081633 GTGTATGTGTGAAAATTTTCAGGATGA 58.918 33.333 29.34 14.88 46.80 2.92
4331 4673 6.969366 TCAGGATGAAATACCAAATATTGCG 58.031 36.000 0.00 0.00 45.97 4.85
4332 4674 6.770303 TCAGGATGAAATACCAAATATTGCGA 59.230 34.615 0.00 0.00 45.97 5.10
4333 4675 7.041167 TCAGGATGAAATACCAAATATTGCGAG 60.041 37.037 0.00 0.00 45.97 5.03
4334 4676 5.858581 GGATGAAATACCAAATATTGCGAGC 59.141 40.000 0.00 0.00 31.86 5.03
4335 4677 6.294176 GGATGAAATACCAAATATTGCGAGCT 60.294 38.462 0.00 0.00 31.86 4.09
4336 4678 5.820131 TGAAATACCAAATATTGCGAGCTG 58.180 37.500 0.00 0.00 31.86 4.24
4337 4679 3.904136 ATACCAAATATTGCGAGCTGC 57.096 42.857 0.00 0.00 46.70 5.25
4371 4713 9.918630 AAAATCATGGACTTTAAAGATGAACAG 57.081 29.630 21.92 5.57 0.00 3.16
4372 4714 8.641498 AATCATGGACTTTAAAGATGAACAGT 57.359 30.769 21.92 3.41 0.00 3.55
4373 4715 9.739276 AATCATGGACTTTAAAGATGAACAGTA 57.261 29.630 21.92 5.83 0.00 2.74
4374 4716 8.547967 TCATGGACTTTAAAGATGAACAGTAC 57.452 34.615 21.92 0.00 0.00 2.73
4375 4717 8.154203 TCATGGACTTTAAAGATGAACAGTACA 58.846 33.333 21.92 4.66 29.71 2.90
4376 4718 8.950210 CATGGACTTTAAAGATGAACAGTACAT 58.050 33.333 21.92 6.87 36.43 2.29
4380 4722 9.922305 GACTTTAAAGATGAACAGTACATATGC 57.078 33.333 21.92 0.00 0.00 3.14
4381 4723 9.672673 ACTTTAAAGATGAACAGTACATATGCT 57.327 29.630 21.92 0.00 0.00 3.79
4388 4730 8.616076 AGATGAACAGTACATATGCTAAAAAGC 58.384 33.333 1.58 0.00 0.00 3.51
4389 4731 7.083875 TGAACAGTACATATGCTAAAAAGCC 57.916 36.000 1.58 0.00 0.00 4.35
4390 4732 6.094881 TGAACAGTACATATGCTAAAAAGCCC 59.905 38.462 1.58 0.00 0.00 5.19
4391 4733 4.887655 ACAGTACATATGCTAAAAAGCCCC 59.112 41.667 1.58 0.00 0.00 5.80
4392 4734 4.887071 CAGTACATATGCTAAAAAGCCCCA 59.113 41.667 1.58 0.00 0.00 4.96
4393 4735 5.009010 CAGTACATATGCTAAAAAGCCCCAG 59.991 44.000 1.58 0.00 0.00 4.45
4394 4736 4.249638 ACATATGCTAAAAAGCCCCAGA 57.750 40.909 1.58 0.00 0.00 3.86
4395 4737 4.808042 ACATATGCTAAAAAGCCCCAGAT 58.192 39.130 1.58 0.00 0.00 2.90
4396 4738 5.211201 ACATATGCTAAAAAGCCCCAGATT 58.789 37.500 1.58 0.00 0.00 2.40
4397 4739 5.662657 ACATATGCTAAAAAGCCCCAGATTT 59.337 36.000 1.58 0.00 31.52 2.17
4398 4740 3.959535 TGCTAAAAAGCCCCAGATTTG 57.040 42.857 0.00 0.00 30.45 2.32
4399 4741 3.238597 TGCTAAAAAGCCCCAGATTTGT 58.761 40.909 0.00 0.00 30.45 2.83
4400 4742 3.258123 TGCTAAAAAGCCCCAGATTTGTC 59.742 43.478 0.00 0.00 30.45 3.18
4401 4743 3.511540 GCTAAAAAGCCCCAGATTTGTCT 59.488 43.478 0.00 0.00 30.45 3.41
4402 4744 4.021104 GCTAAAAAGCCCCAGATTTGTCTT 60.021 41.667 0.00 0.00 30.45 3.01
4403 4745 5.511373 GCTAAAAAGCCCCAGATTTGTCTTT 60.511 40.000 0.00 0.00 30.45 2.52
4404 4746 5.372343 AAAAAGCCCCAGATTTGTCTTTT 57.628 34.783 0.00 0.00 35.89 2.27
4405 4747 5.372343 AAAAGCCCCAGATTTGTCTTTTT 57.628 34.783 0.00 0.00 31.97 1.94
4433 4775 9.289303 GTGTAGCTCACATTTTATTGTATTTGG 57.711 33.333 10.30 0.00 45.51 3.28
4434 4776 9.237187 TGTAGCTCACATTTTATTGTATTTGGA 57.763 29.630 0.00 0.00 30.04 3.53
4435 4777 9.503427 GTAGCTCACATTTTATTGTATTTGGAC 57.497 33.333 0.00 0.00 0.00 4.02
4436 4778 7.547227 AGCTCACATTTTATTGTATTTGGACC 58.453 34.615 0.00 0.00 0.00 4.46
4437 4779 7.397192 AGCTCACATTTTATTGTATTTGGACCT 59.603 33.333 0.00 0.00 0.00 3.85
4438 4780 8.682710 GCTCACATTTTATTGTATTTGGACCTA 58.317 33.333 0.00 0.00 0.00 3.08
4449 4791 7.954788 TGTATTTGGACCTAAAAATTTGCAC 57.045 32.000 0.00 0.00 0.00 4.57
4450 4792 7.500992 TGTATTTGGACCTAAAAATTTGCACA 58.499 30.769 0.00 0.00 0.00 4.57
4451 4793 7.655328 TGTATTTGGACCTAAAAATTTGCACAG 59.345 33.333 0.00 0.00 0.00 3.66
4452 4794 5.860941 TTGGACCTAAAAATTTGCACAGA 57.139 34.783 0.00 0.00 0.00 3.41
4453 4795 6.418057 TTGGACCTAAAAATTTGCACAGAT 57.582 33.333 0.00 0.00 0.00 2.90
4454 4796 5.782047 TGGACCTAAAAATTTGCACAGATG 58.218 37.500 0.00 0.00 0.00 2.90
4455 4797 5.304101 TGGACCTAAAAATTTGCACAGATGT 59.696 36.000 0.00 0.00 0.00 3.06
4456 4798 6.491745 TGGACCTAAAAATTTGCACAGATGTA 59.508 34.615 0.00 0.00 0.00 2.29
4457 4799 7.178274 TGGACCTAAAAATTTGCACAGATGTAT 59.822 33.333 0.00 0.00 0.00 2.29
4458 4800 8.682710 GGACCTAAAAATTTGCACAGATGTATA 58.317 33.333 0.00 0.00 0.00 1.47
4545 4887 8.896320 TTTAAAGTTTTCAAATAAAGGCCTCC 57.104 30.769 5.23 0.00 0.00 4.30
4546 4888 6.493189 AAAGTTTTCAAATAAAGGCCTCCA 57.507 33.333 5.23 0.00 0.00 3.86
4547 4889 6.686484 AAGTTTTCAAATAAAGGCCTCCAT 57.314 33.333 5.23 0.00 0.00 3.41
4548 4890 6.041423 AGTTTTCAAATAAAGGCCTCCATG 57.959 37.500 5.23 1.29 0.00 3.66
4549 4891 5.046376 AGTTTTCAAATAAAGGCCTCCATGG 60.046 40.000 5.23 4.97 39.35 3.66
4550 4892 4.329638 TTCAAATAAAGGCCTCCATGGA 57.670 40.909 15.27 15.27 38.35 3.41
4551 4893 3.902218 TCAAATAAAGGCCTCCATGGAG 58.098 45.455 31.69 31.69 41.63 3.86
4552 4894 2.363359 CAAATAAAGGCCTCCATGGAGC 59.637 50.000 32.97 26.44 40.69 4.70
4553 4895 0.480252 ATAAAGGCCTCCATGGAGCC 59.520 55.000 32.97 32.39 40.69 4.70
4554 4896 1.645402 TAAAGGCCTCCATGGAGCCC 61.645 60.000 33.72 32.43 39.79 5.19
4558 4900 3.866582 CCTCCATGGAGCCCGGTC 61.867 72.222 32.97 0.00 40.69 4.79
4559 4901 2.765807 CTCCATGGAGCCCGGTCT 60.766 66.667 28.45 0.00 35.31 3.85
4560 4902 2.764128 TCCATGGAGCCCGGTCTC 60.764 66.667 11.44 3.23 0.00 3.36
4565 4907 3.703127 GGAGCCCGGTCTCCGTTT 61.703 66.667 17.19 0.00 46.80 3.60
4566 4908 2.434359 GAGCCCGGTCTCCGTTTG 60.434 66.667 0.00 0.00 46.80 2.93
4567 4909 3.952628 GAGCCCGGTCTCCGTTTGG 62.953 68.421 0.00 2.99 46.80 3.28
4569 4911 4.323477 CCCGGTCTCCGTTTGGCA 62.323 66.667 0.00 0.00 46.80 4.92
4570 4912 2.046314 CCGGTCTCCGTTTGGCAT 60.046 61.111 7.40 0.00 46.80 4.40
4571 4913 1.674322 CCGGTCTCCGTTTGGCATT 60.674 57.895 7.40 0.00 46.80 3.56
4572 4914 1.241315 CCGGTCTCCGTTTGGCATTT 61.241 55.000 7.40 0.00 46.80 2.32
4573 4915 0.596082 CGGTCTCCGTTTGGCATTTT 59.404 50.000 0.00 0.00 42.73 1.82
4574 4916 1.401018 CGGTCTCCGTTTGGCATTTTC 60.401 52.381 0.00 0.00 42.73 2.29
4575 4917 1.401018 GGTCTCCGTTTGGCATTTTCG 60.401 52.381 0.00 0.00 34.14 3.46
4576 4918 1.533731 GTCTCCGTTTGGCATTTTCGA 59.466 47.619 0.00 0.00 34.14 3.71
4577 4919 2.031508 GTCTCCGTTTGGCATTTTCGAA 60.032 45.455 0.00 0.00 34.14 3.71
4635 5040 1.821136 GCAAGGCAGGCTACAATTCTT 59.179 47.619 0.00 0.00 0.00 2.52
4636 5041 2.159324 GCAAGGCAGGCTACAATTCTTC 60.159 50.000 0.00 0.00 0.00 2.87
4637 5042 3.350833 CAAGGCAGGCTACAATTCTTCT 58.649 45.455 0.00 0.00 0.00 2.85
4754 5159 2.353704 CGCTGAAGGAGTGATAACACCA 60.354 50.000 0.00 0.00 46.99 4.17
4945 5351 0.401738 TGGCTTAGCTTGACTTGCCT 59.598 50.000 3.59 0.00 43.29 4.75
4949 5355 2.095516 GCTTAGCTTGACTTGCCTTGTC 60.096 50.000 0.00 0.00 35.21 3.18
4976 5382 1.674962 GCAGGAGATGGCTGTGAAATC 59.325 52.381 0.00 0.00 0.00 2.17
5207 5613 2.084546 GCATTTGCTCGGAGGTACTTT 58.915 47.619 7.20 0.00 37.01 2.66
5299 5705 2.507058 TGCTAGATTGCAAGGGATCACT 59.493 45.455 4.94 0.00 40.29 3.41
5341 5747 1.449601 ATCCAAGCGCCGTTTCGAT 60.450 52.632 2.29 0.00 0.00 3.59
5347 5753 2.388232 GCGCCGTTTCGATGACCTT 61.388 57.895 0.00 0.00 0.00 3.50
5371 5777 0.036022 AAGCGCTTTCTGAGGAGCTT 59.964 50.000 18.98 14.12 42.04 3.74
5386 5792 1.000396 GCTTGAGAGGGCAATGGGT 60.000 57.895 0.00 0.00 0.00 4.51
5530 5936 3.790334 AAGCGACACTCGTGCTGCA 62.790 57.895 14.00 0.00 42.81 4.41
5575 5982 1.066143 AGAAGATCGCCGTTGTCCATT 60.066 47.619 0.00 0.00 0.00 3.16
5577 5984 2.684001 AGATCGCCGTTGTCCATTTA 57.316 45.000 0.00 0.00 0.00 1.40
5622 6029 3.669251 ACTTTGTACAGAGAGCTGACC 57.331 47.619 19.53 0.00 45.17 4.02
5625 6032 1.550327 TGTACAGAGAGCTGACCCTG 58.450 55.000 0.00 0.00 45.17 4.45
5771 6179 7.448748 AATGGTGTTACAGTGAAAATAGGAC 57.551 36.000 0.00 0.00 0.00 3.85
5772 6180 6.182507 TGGTGTTACAGTGAAAATAGGACT 57.817 37.500 0.00 0.00 0.00 3.85
5773 6181 6.228258 TGGTGTTACAGTGAAAATAGGACTC 58.772 40.000 0.00 0.00 0.00 3.36
5774 6182 6.042781 TGGTGTTACAGTGAAAATAGGACTCT 59.957 38.462 0.00 0.00 0.00 3.24
5775 6183 6.590677 GGTGTTACAGTGAAAATAGGACTCTC 59.409 42.308 0.00 0.00 0.00 3.20
5777 6185 6.269077 TGTTACAGTGAAAATAGGACTCTCCA 59.731 38.462 0.00 0.00 39.61 3.86
5778 6186 5.825593 ACAGTGAAAATAGGACTCTCCAA 57.174 39.130 0.00 0.00 39.61 3.53
5782 6190 6.656693 CAGTGAAAATAGGACTCTCCAACAAT 59.343 38.462 0.00 0.00 39.61 2.71
5786 6197 9.396022 TGAAAATAGGACTCTCCAACAATATTC 57.604 33.333 0.00 0.00 39.61 1.75
5789 6200 5.012328 AGGACTCTCCAACAATATTCGAC 57.988 43.478 0.00 0.00 39.61 4.20
5795 6206 5.041287 TCTCCAACAATATTCGACGATCAC 58.959 41.667 0.00 0.00 0.00 3.06
5796 6207 4.116961 TCCAACAATATTCGACGATCACC 58.883 43.478 0.00 0.00 0.00 4.02
5798 6209 2.739292 ACAATATTCGACGATCACCCG 58.261 47.619 0.00 0.00 0.00 5.28
5801 6212 2.945447 TATTCGACGATCACCCGTTT 57.055 45.000 0.00 0.00 43.49 3.60
5821 6232 6.973474 CCGTTTGAGTTTGTGTTATTTTGGTA 59.027 34.615 0.00 0.00 0.00 3.25
5823 6234 7.698970 CGTTTGAGTTTGTGTTATTTTGGTACT 59.301 33.333 0.00 0.00 0.00 2.73
5923 6346 9.255304 GTCTGACTAAATATGAACAGAGAATCC 57.745 37.037 0.00 0.00 35.55 3.01
5924 6347 8.138074 TCTGACTAAATATGAACAGAGAATCCG 58.862 37.037 0.00 0.00 33.66 4.18
5999 6436 4.156739 GCTAAAGGAAGGAACACCATTCTG 59.843 45.833 0.00 0.00 0.00 3.02
6164 6602 1.219646 GTGCTTCGTAACCGTGGAAA 58.780 50.000 0.00 0.00 35.01 3.13
6166 6604 1.068895 TGCTTCGTAACCGTGGAAAGA 59.931 47.619 0.00 0.00 35.01 2.52
6167 6605 2.137523 GCTTCGTAACCGTGGAAAGAA 58.862 47.619 0.00 0.00 35.01 2.52
6168 6606 2.096565 GCTTCGTAACCGTGGAAAGAAC 60.097 50.000 0.00 0.00 35.01 3.01
6169 6607 2.886862 TCGTAACCGTGGAAAGAACA 57.113 45.000 0.00 0.00 35.01 3.18
6170 6608 3.176552 TCGTAACCGTGGAAAGAACAA 57.823 42.857 0.00 0.00 35.01 2.83
6171 6609 2.865551 TCGTAACCGTGGAAAGAACAAC 59.134 45.455 0.00 0.00 35.01 3.32
6204 6643 3.260884 GTCTCAACCTAGTGTGATGGGAA 59.739 47.826 0.00 0.00 0.00 3.97
6205 6644 3.260884 TCTCAACCTAGTGTGATGGGAAC 59.739 47.826 0.00 0.00 0.00 3.62
6275 6715 7.363181 CCATTACACATGATGAAGAAACATGGT 60.363 37.037 0.00 0.00 43.55 3.55
6315 6755 0.807275 CAGCGGAATCATCACTGCGA 60.807 55.000 0.00 0.00 42.40 5.10
6322 6762 4.201851 CGGAATCATCACTGCGATTTCTTT 60.202 41.667 0.00 0.00 32.05 2.52
6544 6984 3.147629 CCTCCTGATTGATGCCATCTTC 58.852 50.000 6.21 4.02 0.00 2.87
6587 7027 4.245660 CTGAACAGATCGCAGGAGTTAAA 58.754 43.478 0.00 0.00 0.00 1.52
6606 7046 6.818644 AGTTAAATTAGAGCTCAGCAATTCGA 59.181 34.615 17.77 7.48 0.00 3.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.444536 TGTGGCACTTATCGGTTTATACC 58.555 43.478 19.83 0.00 41.33 2.73
2 3 5.526111 ACATGTGGCACTTATCGGTTTATAC 59.474 40.000 19.83 0.00 0.00 1.47
3 4 5.525745 CACATGTGGCACTTATCGGTTTATA 59.474 40.000 18.51 0.00 0.00 0.98
4 5 4.335315 CACATGTGGCACTTATCGGTTTAT 59.665 41.667 18.51 0.00 0.00 1.40
5 6 3.687212 CACATGTGGCACTTATCGGTTTA 59.313 43.478 18.51 0.00 0.00 2.01
6 7 2.487762 CACATGTGGCACTTATCGGTTT 59.512 45.455 18.51 0.00 0.00 3.27
7 8 2.083774 CACATGTGGCACTTATCGGTT 58.916 47.619 18.51 0.00 0.00 4.44
8 9 1.003118 ACACATGTGGCACTTATCGGT 59.997 47.619 28.64 6.78 34.19 4.69
9 10 1.398041 CACACATGTGGCACTTATCGG 59.602 52.381 28.64 6.16 42.10 4.18
10 11 2.811902 CACACATGTGGCACTTATCG 57.188 50.000 28.64 6.17 42.10 2.92
20 21 1.081906 GCTTCGTGCCACACATGTG 60.082 57.895 24.25 24.25 45.23 3.21
21 22 1.525765 TGCTTCGTGCCACACATGT 60.526 52.632 0.00 0.00 42.00 3.21
22 23 1.081906 GTGCTTCGTGCCACACATG 60.082 57.895 0.00 0.00 42.00 3.21
23 24 1.227943 AGTGCTTCGTGCCACACAT 60.228 52.632 0.00 0.00 42.00 3.21
24 25 1.887242 GAGTGCTTCGTGCCACACA 60.887 57.895 0.00 0.00 42.00 3.72
25 26 2.607892 GGAGTGCTTCGTGCCACAC 61.608 63.158 0.00 0.00 42.00 3.82
26 27 2.280797 GGAGTGCTTCGTGCCACA 60.281 61.111 0.00 0.00 42.00 4.17
27 28 3.414700 CGGAGTGCTTCGTGCCAC 61.415 66.667 0.00 0.00 42.00 5.01
28 29 3.611674 TCGGAGTGCTTCGTGCCA 61.612 61.111 0.00 0.00 42.00 4.92
29 30 3.112709 GTCGGAGTGCTTCGTGCC 61.113 66.667 0.00 0.00 42.00 5.01
30 31 0.388134 TAAGTCGGAGTGCTTCGTGC 60.388 55.000 0.00 0.00 43.25 5.34
31 32 1.719780 GTTAAGTCGGAGTGCTTCGTG 59.280 52.381 0.00 0.00 0.00 4.35
32 33 1.665161 CGTTAAGTCGGAGTGCTTCGT 60.665 52.381 0.00 0.00 0.00 3.85
33 34 0.982673 CGTTAAGTCGGAGTGCTTCG 59.017 55.000 0.00 0.00 0.00 3.79
34 35 2.061740 ACGTTAAGTCGGAGTGCTTC 57.938 50.000 0.00 0.00 34.94 3.86
35 36 2.521105 AACGTTAAGTCGGAGTGCTT 57.479 45.000 0.00 0.00 34.94 3.91
36 37 2.521105 AAACGTTAAGTCGGAGTGCT 57.479 45.000 0.00 0.00 34.94 4.40
37 38 3.597377 AAAAACGTTAAGTCGGAGTGC 57.403 42.857 0.00 0.00 34.94 4.40
62 63 4.825085 TCTTTTCGGATGGCAACTTTAGTT 59.175 37.500 0.00 0.00 39.12 2.24
63 64 4.394729 TCTTTTCGGATGGCAACTTTAGT 58.605 39.130 0.00 0.00 37.61 2.24
64 65 5.371115 TTCTTTTCGGATGGCAACTTTAG 57.629 39.130 0.00 0.00 37.61 1.85
65 66 5.776173 TTTCTTTTCGGATGGCAACTTTA 57.224 34.783 0.00 0.00 37.61 1.85
66 67 4.664150 TTTCTTTTCGGATGGCAACTTT 57.336 36.364 0.00 0.00 37.61 2.66
67 68 4.340950 TCTTTTCTTTTCGGATGGCAACTT 59.659 37.500 0.00 0.00 37.61 2.66
68 69 3.888930 TCTTTTCTTTTCGGATGGCAACT 59.111 39.130 0.00 0.00 37.61 3.16
69 70 3.981416 GTCTTTTCTTTTCGGATGGCAAC 59.019 43.478 0.00 0.00 0.00 4.17
70 71 3.634448 TGTCTTTTCTTTTCGGATGGCAA 59.366 39.130 0.00 0.00 0.00 4.52
71 72 3.218453 TGTCTTTTCTTTTCGGATGGCA 58.782 40.909 0.00 0.00 0.00 4.92
72 73 3.915437 TGTCTTTTCTTTTCGGATGGC 57.085 42.857 0.00 0.00 0.00 4.40
73 74 4.982295 GGTTTGTCTTTTCTTTTCGGATGG 59.018 41.667 0.00 0.00 0.00 3.51
74 75 4.982295 GGGTTTGTCTTTTCTTTTCGGATG 59.018 41.667 0.00 0.00 0.00 3.51
75 76 4.038763 GGGGTTTGTCTTTTCTTTTCGGAT 59.961 41.667 0.00 0.00 0.00 4.18
76 77 3.382227 GGGGTTTGTCTTTTCTTTTCGGA 59.618 43.478 0.00 0.00 0.00 4.55
77 78 3.491964 GGGGGTTTGTCTTTTCTTTTCGG 60.492 47.826 0.00 0.00 0.00 4.30
78 79 3.131400 TGGGGGTTTGTCTTTTCTTTTCG 59.869 43.478 0.00 0.00 0.00 3.46
79 80 4.746535 TGGGGGTTTGTCTTTTCTTTTC 57.253 40.909 0.00 0.00 0.00 2.29
80 81 5.506730 TTTGGGGGTTTGTCTTTTCTTTT 57.493 34.783 0.00 0.00 0.00 2.27
81 82 5.506730 TTTTGGGGGTTTGTCTTTTCTTT 57.493 34.783 0.00 0.00 0.00 2.52
82 83 5.506730 TTTTTGGGGGTTTGTCTTTTCTT 57.493 34.783 0.00 0.00 0.00 2.52
103 104 9.612066 TCTTTTCAGATGGCAAGTTTTAATTTT 57.388 25.926 0.00 0.00 0.00 1.82
104 105 9.612066 TTCTTTTCAGATGGCAAGTTTTAATTT 57.388 25.926 0.00 0.00 0.00 1.82
105 106 9.264719 CTTCTTTTCAGATGGCAAGTTTTAATT 57.735 29.630 0.00 0.00 0.00 1.40
106 107 8.424133 ACTTCTTTTCAGATGGCAAGTTTTAAT 58.576 29.630 0.00 0.00 0.00 1.40
107 108 7.781056 ACTTCTTTTCAGATGGCAAGTTTTAA 58.219 30.769 0.00 0.00 0.00 1.52
108 109 7.346751 ACTTCTTTTCAGATGGCAAGTTTTA 57.653 32.000 0.00 0.00 0.00 1.52
109 110 6.225981 ACTTCTTTTCAGATGGCAAGTTTT 57.774 33.333 0.00 0.00 0.00 2.43
110 111 5.859205 ACTTCTTTTCAGATGGCAAGTTT 57.141 34.783 0.00 0.00 0.00 2.66
111 112 5.127682 ACAACTTCTTTTCAGATGGCAAGTT 59.872 36.000 0.00 0.00 28.88 2.66
112 113 4.646492 ACAACTTCTTTTCAGATGGCAAGT 59.354 37.500 0.00 0.00 0.00 3.16
113 114 5.192327 ACAACTTCTTTTCAGATGGCAAG 57.808 39.130 0.00 0.00 0.00 4.01
114 115 4.644234 TGACAACTTCTTTTCAGATGGCAA 59.356 37.500 0.00 0.00 23.86 4.52
115 116 4.206375 TGACAACTTCTTTTCAGATGGCA 58.794 39.130 0.00 0.00 0.00 4.92
116 117 4.836125 TGACAACTTCTTTTCAGATGGC 57.164 40.909 0.00 0.00 0.00 4.40
117 118 5.709164 AGGATGACAACTTCTTTTCAGATGG 59.291 40.000 0.00 0.00 0.00 3.51
118 119 6.814506 AGGATGACAACTTCTTTTCAGATG 57.185 37.500 0.00 0.00 0.00 2.90
119 120 6.294397 GCAAGGATGACAACTTCTTTTCAGAT 60.294 38.462 0.00 0.00 0.00 2.90
120 121 5.009010 GCAAGGATGACAACTTCTTTTCAGA 59.991 40.000 0.00 0.00 0.00 3.27
121 122 5.218139 GCAAGGATGACAACTTCTTTTCAG 58.782 41.667 0.00 0.00 0.00 3.02
122 123 4.261155 CGCAAGGATGACAACTTCTTTTCA 60.261 41.667 0.00 0.00 0.00 2.69
123 124 4.222114 CGCAAGGATGACAACTTCTTTTC 58.778 43.478 0.00 0.00 0.00 2.29
124 125 3.632145 ACGCAAGGATGACAACTTCTTTT 59.368 39.130 0.00 0.00 46.39 2.27
125 126 3.214328 ACGCAAGGATGACAACTTCTTT 58.786 40.909 0.00 0.00 46.39 2.52
126 127 2.808543 GACGCAAGGATGACAACTTCTT 59.191 45.455 0.00 0.00 46.39 2.52
127 128 2.224281 TGACGCAAGGATGACAACTTCT 60.224 45.455 0.00 0.00 46.39 2.85
128 129 2.096218 GTGACGCAAGGATGACAACTTC 60.096 50.000 0.00 0.00 46.39 3.01
129 130 1.873591 GTGACGCAAGGATGACAACTT 59.126 47.619 0.00 0.00 46.39 2.66
130 131 1.070758 AGTGACGCAAGGATGACAACT 59.929 47.619 0.00 0.00 46.39 3.16
131 132 1.512926 AGTGACGCAAGGATGACAAC 58.487 50.000 0.00 0.00 46.39 3.32
132 133 3.394674 TTAGTGACGCAAGGATGACAA 57.605 42.857 0.00 0.00 46.39 3.18
133 134 3.064207 GTTTAGTGACGCAAGGATGACA 58.936 45.455 0.00 0.00 46.39 3.58
134 135 3.326747 AGTTTAGTGACGCAAGGATGAC 58.673 45.455 0.00 0.00 46.39 3.06
135 136 3.678056 AGTTTAGTGACGCAAGGATGA 57.322 42.857 0.00 0.00 46.39 2.92
136 137 3.667960 GCAAGTTTAGTGACGCAAGGATG 60.668 47.826 0.00 0.00 46.39 3.51
137 138 2.484264 GCAAGTTTAGTGACGCAAGGAT 59.516 45.455 0.00 0.00 46.39 3.24
138 139 1.871039 GCAAGTTTAGTGACGCAAGGA 59.129 47.619 0.00 0.00 46.39 3.36
139 140 1.601903 TGCAAGTTTAGTGACGCAAGG 59.398 47.619 0.00 0.00 46.39 3.61
140 141 3.888934 ATTGCAAGTTTAGTGACGCAAG 58.111 40.909 4.94 0.00 42.07 4.01
141 142 3.980646 ATTGCAAGTTTAGTGACGCAA 57.019 38.095 4.94 0.00 42.86 4.85
142 143 5.425577 TTTATTGCAAGTTTAGTGACGCA 57.574 34.783 4.94 0.00 0.00 5.24
143 144 6.741448 TTTTTATTGCAAGTTTAGTGACGC 57.259 33.333 4.94 0.00 0.00 5.19
144 145 8.751335 ACAATTTTTATTGCAAGTTTAGTGACG 58.249 29.630 4.94 0.00 35.04 4.35
153 154 9.771915 CAACTTTGAACAATTTTTATTGCAAGT 57.228 25.926 4.94 0.00 35.04 3.16
154 155 9.771915 ACAACTTTGAACAATTTTTATTGCAAG 57.228 25.926 4.94 0.00 35.04 4.01
155 156 9.766277 GACAACTTTGAACAATTTTTATTGCAA 57.234 25.926 0.00 0.00 35.04 4.08
156 157 8.939929 TGACAACTTTGAACAATTTTTATTGCA 58.060 25.926 0.00 0.00 35.04 4.08
157 158 9.934190 ATGACAACTTTGAACAATTTTTATTGC 57.066 25.926 0.00 0.00 35.04 3.56
161 162 9.429359 ACACATGACAACTTTGAACAATTTTTA 57.571 25.926 0.00 0.00 0.00 1.52
162 163 8.321650 ACACATGACAACTTTGAACAATTTTT 57.678 26.923 0.00 0.00 0.00 1.94
163 164 7.903995 ACACATGACAACTTTGAACAATTTT 57.096 28.000 0.00 0.00 0.00 1.82
164 165 7.601886 TGAACACATGACAACTTTGAACAATTT 59.398 29.630 0.00 0.00 0.00 1.82
165 166 7.095910 TGAACACATGACAACTTTGAACAATT 58.904 30.769 0.00 0.00 0.00 2.32
166 167 6.629128 TGAACACATGACAACTTTGAACAAT 58.371 32.000 0.00 0.00 0.00 2.71
167 168 6.018589 TGAACACATGACAACTTTGAACAA 57.981 33.333 0.00 0.00 0.00 2.83
168 169 5.635417 TGAACACATGACAACTTTGAACA 57.365 34.783 0.00 0.00 0.00 3.18
169 170 6.198966 GGAATGAACACATGACAACTTTGAAC 59.801 38.462 0.00 0.00 0.00 3.18
170 171 6.127507 TGGAATGAACACATGACAACTTTGAA 60.128 34.615 0.00 0.00 0.00 2.69
171 172 5.359292 TGGAATGAACACATGACAACTTTGA 59.641 36.000 0.00 0.00 0.00 2.69
172 173 5.459762 GTGGAATGAACACATGACAACTTTG 59.540 40.000 0.00 0.00 38.67 2.77
173 174 5.126869 TGTGGAATGAACACATGACAACTTT 59.873 36.000 0.00 0.00 43.35 2.66
174 175 4.644234 TGTGGAATGAACACATGACAACTT 59.356 37.500 0.00 0.00 43.35 2.66
175 176 4.206375 TGTGGAATGAACACATGACAACT 58.794 39.130 0.00 0.00 43.35 3.16
176 177 4.566545 TGTGGAATGAACACATGACAAC 57.433 40.909 0.00 0.00 43.35 3.32
190 191 5.487433 TGATAAGTGACATTCGTGTGGAAT 58.513 37.500 0.00 0.00 46.29 3.01
191 192 4.888917 TGATAAGTGACATTCGTGTGGAA 58.111 39.130 0.00 0.00 39.42 3.53
192 193 4.219725 TCTGATAAGTGACATTCGTGTGGA 59.780 41.667 0.00 0.00 0.00 4.02
193 194 4.494484 TCTGATAAGTGACATTCGTGTGG 58.506 43.478 0.00 0.00 0.00 4.17
194 195 5.164233 ACTCTGATAAGTGACATTCGTGTG 58.836 41.667 0.00 0.00 0.00 3.82
195 196 5.392767 ACTCTGATAAGTGACATTCGTGT 57.607 39.130 0.00 0.00 0.00 4.49
196 197 4.800993 GGACTCTGATAAGTGACATTCGTG 59.199 45.833 0.00 0.00 0.00 4.35
197 198 4.707448 AGGACTCTGATAAGTGACATTCGT 59.293 41.667 0.00 0.00 0.00 3.85
198 199 5.255710 AGGACTCTGATAAGTGACATTCG 57.744 43.478 0.00 0.00 0.00 3.34
199 200 8.177119 AGATAGGACTCTGATAAGTGACATTC 57.823 38.462 0.00 0.00 0.00 2.67
200 201 8.546083 AAGATAGGACTCTGATAAGTGACATT 57.454 34.615 0.00 0.00 0.00 2.71
201 202 9.295825 CTAAGATAGGACTCTGATAAGTGACAT 57.704 37.037 0.00 0.00 0.00 3.06
202 203 8.275758 ACTAAGATAGGACTCTGATAAGTGACA 58.724 37.037 0.00 0.00 0.00 3.58
203 204 8.685838 ACTAAGATAGGACTCTGATAAGTGAC 57.314 38.462 0.00 0.00 0.00 3.67
204 205 8.495260 TGACTAAGATAGGACTCTGATAAGTGA 58.505 37.037 0.00 0.00 0.00 3.41
205 206 8.684386 TGACTAAGATAGGACTCTGATAAGTG 57.316 38.462 0.00 0.00 0.00 3.16
206 207 9.702253 TTTGACTAAGATAGGACTCTGATAAGT 57.298 33.333 0.00 0.00 0.00 2.24
209 210 9.647918 ACATTTGACTAAGATAGGACTCTGATA 57.352 33.333 0.00 0.00 0.00 2.15
210 211 8.546083 ACATTTGACTAAGATAGGACTCTGAT 57.454 34.615 0.00 0.00 0.00 2.90
211 212 7.962995 ACATTTGACTAAGATAGGACTCTGA 57.037 36.000 0.00 0.00 0.00 3.27
212 213 8.356657 CCTACATTTGACTAAGATAGGACTCTG 58.643 40.741 4.08 0.00 32.58 3.35
213 214 8.062536 ACCTACATTTGACTAAGATAGGACTCT 58.937 37.037 12.79 0.00 34.00 3.24
214 215 8.138712 CACCTACATTTGACTAAGATAGGACTC 58.861 40.741 12.79 0.00 34.00 3.36
215 216 7.418025 GCACCTACATTTGACTAAGATAGGACT 60.418 40.741 12.79 0.00 34.00 3.85
216 217 6.702282 GCACCTACATTTGACTAAGATAGGAC 59.298 42.308 12.79 4.67 34.00 3.85
217 218 6.183360 GGCACCTACATTTGACTAAGATAGGA 60.183 42.308 12.79 0.00 34.00 2.94
218 219 5.992217 GGCACCTACATTTGACTAAGATAGG 59.008 44.000 7.17 7.17 35.12 2.57
219 220 6.582636 TGGCACCTACATTTGACTAAGATAG 58.417 40.000 0.00 0.00 0.00 2.08
220 221 6.553953 TGGCACCTACATTTGACTAAGATA 57.446 37.500 0.00 0.00 0.00 1.98
221 222 5.431765 CTGGCACCTACATTTGACTAAGAT 58.568 41.667 0.00 0.00 0.00 2.40
222 223 4.832248 CTGGCACCTACATTTGACTAAGA 58.168 43.478 0.00 0.00 0.00 2.10
223 224 3.375299 GCTGGCACCTACATTTGACTAAG 59.625 47.826 0.00 0.00 0.00 2.18
224 225 3.244735 TGCTGGCACCTACATTTGACTAA 60.245 43.478 0.00 0.00 0.00 2.24
225 226 2.304470 TGCTGGCACCTACATTTGACTA 59.696 45.455 0.00 0.00 0.00 2.59
226 227 1.073763 TGCTGGCACCTACATTTGACT 59.926 47.619 0.00 0.00 0.00 3.41
227 228 1.200020 GTGCTGGCACCTACATTTGAC 59.800 52.381 14.03 0.00 40.79 3.18
228 229 1.533625 GTGCTGGCACCTACATTTGA 58.466 50.000 14.03 0.00 40.79 2.69
238 239 2.531522 AAAGAATTTGGTGCTGGCAC 57.468 45.000 16.33 16.33 45.49 5.01
239 240 3.557228 AAAAAGAATTTGGTGCTGGCA 57.443 38.095 0.00 0.00 39.02 4.92
257 258 3.140623 CGGTCTCGGGGTAAAAGAAAAA 58.859 45.455 0.00 0.00 0.00 1.94
258 259 2.104622 ACGGTCTCGGGGTAAAAGAAAA 59.895 45.455 0.00 0.00 41.39 2.29
259 260 1.693606 ACGGTCTCGGGGTAAAAGAAA 59.306 47.619 0.00 0.00 41.39 2.52
260 261 1.341080 ACGGTCTCGGGGTAAAAGAA 58.659 50.000 0.00 0.00 41.39 2.52
261 262 2.094675 CTACGGTCTCGGGGTAAAAGA 58.905 52.381 0.00 0.00 41.39 2.52
262 263 1.821136 ACTACGGTCTCGGGGTAAAAG 59.179 52.381 0.00 0.00 41.39 2.27
263 264 1.923356 ACTACGGTCTCGGGGTAAAA 58.077 50.000 0.00 0.00 41.39 1.52
264 265 1.818674 GAACTACGGTCTCGGGGTAAA 59.181 52.381 0.00 0.00 41.39 2.01
265 266 1.271871 TGAACTACGGTCTCGGGGTAA 60.272 52.381 0.00 0.00 41.39 2.85
266 267 0.327924 TGAACTACGGTCTCGGGGTA 59.672 55.000 0.00 0.00 41.39 3.69
267 268 0.540365 TTGAACTACGGTCTCGGGGT 60.540 55.000 0.00 0.00 41.39 4.95
268 269 0.108945 GTTGAACTACGGTCTCGGGG 60.109 60.000 0.00 0.00 41.39 5.73
269 270 0.455633 CGTTGAACTACGGTCTCGGG 60.456 60.000 0.00 0.00 41.39 5.14
270 271 3.011513 CGTTGAACTACGGTCTCGG 57.988 57.895 0.00 0.00 41.39 4.63
277 278 3.662186 GTGAAAATTGCCGTTGAACTACG 59.338 43.478 0.00 2.29 41.06 3.51
278 279 3.978855 GGTGAAAATTGCCGTTGAACTAC 59.021 43.478 0.00 0.00 0.00 2.73
279 280 3.632604 TGGTGAAAATTGCCGTTGAACTA 59.367 39.130 0.00 0.00 0.00 2.24
280 281 2.428890 TGGTGAAAATTGCCGTTGAACT 59.571 40.909 0.00 0.00 0.00 3.01
281 282 2.815478 TGGTGAAAATTGCCGTTGAAC 58.185 42.857 0.00 0.00 0.00 3.18
282 283 3.526931 TTGGTGAAAATTGCCGTTGAA 57.473 38.095 0.00 0.00 0.00 2.69
283 284 3.742433 ATTGGTGAAAATTGCCGTTGA 57.258 38.095 0.00 0.00 0.00 3.18
284 285 5.914085 TTAATTGGTGAAAATTGCCGTTG 57.086 34.783 0.00 0.00 32.16 4.10
285 286 6.540551 ACTTTTAATTGGTGAAAATTGCCGTT 59.459 30.769 0.00 0.00 32.16 4.44
286 287 6.052360 ACTTTTAATTGGTGAAAATTGCCGT 58.948 32.000 0.00 0.00 32.16 5.68
287 288 6.538189 ACTTTTAATTGGTGAAAATTGCCG 57.462 33.333 0.00 0.00 32.16 5.69
288 289 9.824534 CATAACTTTTAATTGGTGAAAATTGCC 57.175 29.630 0.00 0.00 32.16 4.52
305 306 9.787435 TCTTGTCCTTGTATGTACATAACTTTT 57.213 29.630 17.07 0.00 35.89 2.27
306 307 9.436957 CTCTTGTCCTTGTATGTACATAACTTT 57.563 33.333 17.07 0.00 35.89 2.66
307 308 7.549488 GCTCTTGTCCTTGTATGTACATAACTT 59.451 37.037 17.07 0.00 35.89 2.66
308 309 7.042335 GCTCTTGTCCTTGTATGTACATAACT 58.958 38.462 17.07 0.00 35.89 2.24
309 310 6.816640 TGCTCTTGTCCTTGTATGTACATAAC 59.183 38.462 17.07 11.60 35.89 1.89
310 311 6.816640 GTGCTCTTGTCCTTGTATGTACATAA 59.183 38.462 17.07 4.09 35.89 1.90
311 312 6.338146 GTGCTCTTGTCCTTGTATGTACATA 58.662 40.000 11.62 11.62 35.89 2.29
312 313 5.178797 GTGCTCTTGTCCTTGTATGTACAT 58.821 41.667 13.93 13.93 35.89 2.29
313 314 4.562757 GGTGCTCTTGTCCTTGTATGTACA 60.563 45.833 0.00 0.00 0.00 2.90
314 315 3.933332 GGTGCTCTTGTCCTTGTATGTAC 59.067 47.826 0.00 0.00 0.00 2.90
315 316 3.368013 CGGTGCTCTTGTCCTTGTATGTA 60.368 47.826 0.00 0.00 0.00 2.29
316 317 2.612972 CGGTGCTCTTGTCCTTGTATGT 60.613 50.000 0.00 0.00 0.00 2.29
317 318 2.002586 CGGTGCTCTTGTCCTTGTATG 58.997 52.381 0.00 0.00 0.00 2.39
318 319 1.899814 TCGGTGCTCTTGTCCTTGTAT 59.100 47.619 0.00 0.00 0.00 2.29
319 320 1.334160 TCGGTGCTCTTGTCCTTGTA 58.666 50.000 0.00 0.00 0.00 2.41
320 321 0.468226 TTCGGTGCTCTTGTCCTTGT 59.532 50.000 0.00 0.00 0.00 3.16
321 322 1.813513 ATTCGGTGCTCTTGTCCTTG 58.186 50.000 0.00 0.00 0.00 3.61
322 323 2.039084 AGAATTCGGTGCTCTTGTCCTT 59.961 45.455 0.00 0.00 0.00 3.36
323 324 1.625818 AGAATTCGGTGCTCTTGTCCT 59.374 47.619 0.00 0.00 0.00 3.85
324 325 1.734465 CAGAATTCGGTGCTCTTGTCC 59.266 52.381 0.00 0.00 0.00 4.02
325 326 1.734465 CCAGAATTCGGTGCTCTTGTC 59.266 52.381 4.86 0.00 0.00 3.18
326 327 1.072331 ACCAGAATTCGGTGCTCTTGT 59.928 47.619 17.47 0.00 34.69 3.16
327 328 1.734465 GACCAGAATTCGGTGCTCTTG 59.266 52.381 21.44 3.89 36.69 3.02
328 329 1.339151 GGACCAGAATTCGGTGCTCTT 60.339 52.381 23.50 4.84 41.35 2.85
329 330 0.250513 GGACCAGAATTCGGTGCTCT 59.749 55.000 23.50 5.38 41.35 4.09
330 331 0.036388 TGGACCAGAATTCGGTGCTC 60.036 55.000 27.47 17.06 44.61 4.26
331 332 0.036010 CTGGACCAGAATTCGGTGCT 60.036 55.000 27.47 9.02 44.61 4.40
332 333 0.036388 TCTGGACCAGAATTCGGTGC 60.036 55.000 22.30 23.80 44.57 5.01
333 334 2.472695 TTCTGGACCAGAATTCGGTG 57.527 50.000 29.45 7.12 44.27 4.94
354 355 8.983702 TGAGATGATTATCCATTTGAATCACA 57.016 30.769 0.00 0.00 41.17 3.58
443 444 0.680921 ATGGGGCAACGAATGGTCAG 60.681 55.000 0.00 0.00 37.60 3.51
457 458 0.107165 GGAAGACGAAAGGGATGGGG 60.107 60.000 0.00 0.00 0.00 4.96
461 462 1.560146 GGGAAGGAAGACGAAAGGGAT 59.440 52.381 0.00 0.00 0.00 3.85
518 519 4.565652 CGGAGATCTGGAAAAGGAAAGGAA 60.566 45.833 0.00 0.00 0.00 3.36
534 535 9.745880 TCAGATTGTTAGTTTAATACGGAGATC 57.254 33.333 0.00 0.00 0.00 2.75
583 584 0.534412 GCAGAGCAGAGCAGAGGTTA 59.466 55.000 0.00 0.00 0.00 2.85
601 602 4.173924 GAGGGAGGCAGCTGGAGC 62.174 72.222 17.12 0.00 42.49 4.70
602 603 3.478274 GGAGGGAGGCAGCTGGAG 61.478 72.222 17.12 0.00 0.00 3.86
605 606 3.478274 GAGGGAGGGAGGCAGCTG 61.478 72.222 10.11 10.11 0.00 4.24
606 607 4.814041 GGAGGGAGGGAGGCAGCT 62.814 72.222 0.00 0.00 0.00 4.24
608 609 4.101077 AGGGAGGGAGGGAGGCAG 62.101 72.222 0.00 0.00 0.00 4.85
609 610 4.095400 GAGGGAGGGAGGGAGGCA 62.095 72.222 0.00 0.00 0.00 4.75
610 611 4.890306 GGAGGGAGGGAGGGAGGC 62.890 77.778 0.00 0.00 0.00 4.70
611 612 2.652113 AAGGAGGGAGGGAGGGAGG 61.652 68.421 0.00 0.00 0.00 4.30
612 613 1.383803 CAAGGAGGGAGGGAGGGAG 60.384 68.421 0.00 0.00 0.00 4.30
613 614 2.787866 CAAGGAGGGAGGGAGGGA 59.212 66.667 0.00 0.00 0.00 4.20
614 615 3.093172 GCAAGGAGGGAGGGAGGG 61.093 72.222 0.00 0.00 0.00 4.30
615 616 3.093172 GGCAAGGAGGGAGGGAGG 61.093 72.222 0.00 0.00 0.00 4.30
616 617 2.285668 TGGCAAGGAGGGAGGGAG 60.286 66.667 0.00 0.00 0.00 4.30
617 618 2.285668 CTGGCAAGGAGGGAGGGA 60.286 66.667 0.00 0.00 0.00 4.20
618 619 2.612115 ACTGGCAAGGAGGGAGGG 60.612 66.667 0.00 0.00 0.00 4.30
655 656 3.181445 GCCCTGACAGAGAGAGAGAGATA 60.181 52.174 3.32 0.00 0.00 1.98
656 657 2.423373 GCCCTGACAGAGAGAGAGAGAT 60.423 54.545 3.32 0.00 0.00 2.75
657 658 1.064758 GCCCTGACAGAGAGAGAGAGA 60.065 57.143 3.32 0.00 0.00 3.10
658 659 1.340893 TGCCCTGACAGAGAGAGAGAG 60.341 57.143 3.32 0.00 0.00 3.20
659 660 0.701147 TGCCCTGACAGAGAGAGAGA 59.299 55.000 3.32 0.00 0.00 3.10
660 661 0.817013 GTGCCCTGACAGAGAGAGAG 59.183 60.000 3.32 0.00 0.00 3.20
661 662 0.113190 TGTGCCCTGACAGAGAGAGA 59.887 55.000 3.32 0.00 0.00 3.10
662 663 0.531657 CTGTGCCCTGACAGAGAGAG 59.468 60.000 3.32 0.00 45.39 3.20
663 664 1.539560 GCTGTGCCCTGACAGAGAGA 61.540 60.000 3.32 0.00 45.39 3.10
664 665 1.079266 GCTGTGCCCTGACAGAGAG 60.079 63.158 3.32 0.00 45.39 3.20
764 778 6.463995 ACTAAACAAGAATCAGCACCAAAA 57.536 33.333 0.00 0.00 0.00 2.44
973 987 7.592903 GGCAACAGAAGAATGAGAAAACTAAAG 59.407 37.037 0.00 0.00 0.00 1.85
1002 1024 3.061848 CCCCGCGAACTTGGCAAT 61.062 61.111 8.23 0.00 0.00 3.56
1015 1037 0.179468 ATCAACGGTATCCAACCCCG 59.821 55.000 0.00 0.00 46.62 5.73
1027 1049 1.470098 CCCTTCAAGAGCAATCAACGG 59.530 52.381 0.00 0.00 0.00 4.44
1070 1092 0.514691 CAAGCTCGGTCAACTCAAGC 59.485 55.000 0.00 0.00 0.00 4.01
1103 1125 4.410400 GAGGCCCGGAACCCAGTG 62.410 72.222 0.73 0.00 0.00 3.66
1154 1176 0.401738 CCAGGAGAAGAAGGCCACAA 59.598 55.000 5.01 0.00 0.00 3.33
1240 1272 5.132648 TGCAATTCCAATCCATAGTAGGAGT 59.867 40.000 0.00 0.00 41.90 3.85
1241 1273 5.624159 TGCAATTCCAATCCATAGTAGGAG 58.376 41.667 0.00 0.00 41.90 3.69
1242 1274 5.645056 TGCAATTCCAATCCATAGTAGGA 57.355 39.130 0.00 0.00 43.01 2.94
1243 1275 6.005823 TGATGCAATTCCAATCCATAGTAGG 58.994 40.000 0.00 0.00 0.00 3.18
1244 1276 6.487668 TGTGATGCAATTCCAATCCATAGTAG 59.512 38.462 0.00 0.00 0.00 2.57
1245 1277 6.363882 TGTGATGCAATTCCAATCCATAGTA 58.636 36.000 0.00 0.00 0.00 1.82
1427 1459 2.295909 CGGGGTGATCAAAACAACACAT 59.704 45.455 0.00 0.00 35.33 3.21
1436 1468 2.106857 ACAAGGTAACGGGGTGATCAAA 59.893 45.455 0.00 0.00 46.39 2.69
1447 1479 4.124851 AGCCTCTTCATACAAGGTAACG 57.875 45.455 0.00 0.00 46.39 3.18
1452 1484 5.006386 AGAACAAAGCCTCTTCATACAAGG 58.994 41.667 0.00 0.00 0.00 3.61
1561 1593 2.025321 AGCCAAAAGTACCACATAGGGG 60.025 50.000 0.00 0.00 43.89 4.79
1797 1909 4.046462 CCACTTGAATTGTCAGTTGCAAG 58.954 43.478 0.00 13.59 38.81 4.01
1845 1957 2.812011 GTGGTCATTTACTTCCAACGCT 59.188 45.455 0.00 0.00 0.00 5.07
1847 1959 4.320202 CCTTGTGGTCATTTACTTCCAACG 60.320 45.833 0.00 0.00 0.00 4.10
2058 2173 6.413892 TGATGCAGTAGTATGTCCAAATCAA 58.586 36.000 0.00 0.00 0.00 2.57
2371 2486 3.118811 CCACAAAACAATGAACCAGTGGT 60.119 43.478 9.70 9.70 40.17 4.16
2532 2649 8.970859 ATTGGTTTTGAACAATAATCCAACAA 57.029 26.923 0.00 0.00 35.67 2.83
2553 2670 9.149225 TGCAAAGCTACAAACATAATAAATTGG 57.851 29.630 0.00 0.00 0.00 3.16
2595 2713 2.685388 TGACCGTGAATTTCTTGCACAA 59.315 40.909 0.00 0.00 32.96 3.33
2599 2717 5.918011 TGTAATTTGACCGTGAATTTCTTGC 59.082 36.000 0.00 0.00 0.00 4.01
2659 2777 2.858745 TGTAAAACAAGCACTCCCTCC 58.141 47.619 0.00 0.00 0.00 4.30
3086 3232 5.691305 GTGCATAGCAAAAACAGAACAATGA 59.309 36.000 0.00 0.00 41.47 2.57
3087 3233 5.462729 TGTGCATAGCAAAAACAGAACAATG 59.537 36.000 0.00 0.00 41.47 2.82
3088 3234 5.599732 TGTGCATAGCAAAAACAGAACAAT 58.400 33.333 0.00 0.00 41.47 2.71
3089 3235 5.003692 TGTGCATAGCAAAAACAGAACAA 57.996 34.783 0.00 0.00 41.47 2.83
3090 3236 4.097741 ACTGTGCATAGCAAAAACAGAACA 59.902 37.500 10.79 0.00 41.47 3.18
3091 3237 4.610945 ACTGTGCATAGCAAAAACAGAAC 58.389 39.130 10.79 0.00 41.47 3.01
3093 3239 4.337836 TGAACTGTGCATAGCAAAAACAGA 59.662 37.500 10.79 0.00 41.47 3.41
3094 3240 4.609947 TGAACTGTGCATAGCAAAAACAG 58.390 39.130 10.79 1.93 41.47 3.16
3239 3402 9.950680 ATGTAGAGTTAACTGTTTGAATTTGTG 57.049 29.630 14.14 0.00 0.00 3.33
3262 3425 3.228188 TCAAGCACTCTGGGAAAATGT 57.772 42.857 0.00 0.00 0.00 2.71
3307 3470 3.998913 TCCATTAAGAGTCCACATGCA 57.001 42.857 0.00 0.00 0.00 3.96
3538 3701 4.097741 TGATAAACCACAATGGCAGCATAC 59.902 41.667 0.00 0.00 42.67 2.39
3640 3810 2.230130 AGACTGCAGGAGTAAGCTCT 57.770 50.000 19.93 6.01 41.38 4.09
3662 3832 1.407299 CGAGGATTCCTGGCACATCAA 60.407 52.381 10.74 0.00 38.20 2.57
3819 3989 5.800296 TCGATTTATTCAGAAGGGACAACA 58.200 37.500 0.00 0.00 0.00 3.33
3839 4010 4.634004 AGGCATGATTTTCGTGTTAATCGA 59.366 37.500 0.00 0.00 35.86 3.59
3903 4076 3.078196 TTGATAGCGGGCCACGGA 61.078 61.111 4.39 0.00 44.51 4.69
4064 4241 6.253727 CGGTAACAACAACAGCAAACAAAATA 59.746 34.615 0.00 0.00 0.00 1.40
4065 4242 5.062809 CGGTAACAACAACAGCAAACAAAAT 59.937 36.000 0.00 0.00 0.00 1.82
4070 4247 3.139603 ACGGTAACAACAACAGCAAAC 57.860 42.857 0.00 0.00 0.00 2.93
4077 4254 4.094090 TCAACCAAACGGTAACAACAAC 57.906 40.909 0.00 0.00 34.92 3.32
4084 4263 6.052405 AGGTATGTATCAACCAAACGGTAA 57.948 37.500 0.00 0.00 38.30 2.85
4086 4265 4.563140 AGGTATGTATCAACCAAACGGT 57.437 40.909 0.00 0.00 38.30 4.83
4163 4505 3.127548 CCAAAATGCTCTACTCGCACAAT 59.872 43.478 0.00 0.00 40.65 2.71
4164 4506 2.483877 CCAAAATGCTCTACTCGCACAA 59.516 45.455 0.00 0.00 40.65 3.33
4165 4507 2.076100 CCAAAATGCTCTACTCGCACA 58.924 47.619 0.00 0.00 40.65 4.57
4166 4508 2.346803 TCCAAAATGCTCTACTCGCAC 58.653 47.619 0.00 0.00 40.65 5.34
4167 4509 2.233676 TCTCCAAAATGCTCTACTCGCA 59.766 45.455 0.00 0.00 42.25 5.10
4168 4510 2.605366 GTCTCCAAAATGCTCTACTCGC 59.395 50.000 0.00 0.00 0.00 5.03
4169 4511 3.190874 GGTCTCCAAAATGCTCTACTCG 58.809 50.000 0.00 0.00 0.00 4.18
4170 4512 3.119101 TCGGTCTCCAAAATGCTCTACTC 60.119 47.826 0.00 0.00 0.00 2.59
4171 4513 2.832129 TCGGTCTCCAAAATGCTCTACT 59.168 45.455 0.00 0.00 0.00 2.57
4172 4514 3.190874 CTCGGTCTCCAAAATGCTCTAC 58.809 50.000 0.00 0.00 0.00 2.59
4173 4515 2.418746 GCTCGGTCTCCAAAATGCTCTA 60.419 50.000 0.00 0.00 0.00 2.43
4174 4516 1.677217 GCTCGGTCTCCAAAATGCTCT 60.677 52.381 0.00 0.00 0.00 4.09
4175 4517 0.729690 GCTCGGTCTCCAAAATGCTC 59.270 55.000 0.00 0.00 0.00 4.26
4176 4518 0.326264 AGCTCGGTCTCCAAAATGCT 59.674 50.000 0.00 0.00 0.00 3.79
4177 4519 1.131315 GAAGCTCGGTCTCCAAAATGC 59.869 52.381 0.00 0.00 0.00 3.56
4178 4520 2.426522 TGAAGCTCGGTCTCCAAAATG 58.573 47.619 0.00 0.00 0.00 2.32
4179 4521 2.859165 TGAAGCTCGGTCTCCAAAAT 57.141 45.000 0.00 0.00 0.00 1.82
4180 4522 2.426522 CATGAAGCTCGGTCTCCAAAA 58.573 47.619 0.00 0.00 0.00 2.44
4181 4523 1.339055 CCATGAAGCTCGGTCTCCAAA 60.339 52.381 0.00 0.00 0.00 3.28
4182 4524 0.250234 CCATGAAGCTCGGTCTCCAA 59.750 55.000 0.00 0.00 0.00 3.53
4183 4525 0.614697 TCCATGAAGCTCGGTCTCCA 60.615 55.000 0.00 0.00 0.00 3.86
4184 4526 0.103937 CTCCATGAAGCTCGGTCTCC 59.896 60.000 0.00 0.00 0.00 3.71
4185 4527 0.529555 GCTCCATGAAGCTCGGTCTC 60.530 60.000 0.00 0.00 39.27 3.36
4186 4528 1.519719 GCTCCATGAAGCTCGGTCT 59.480 57.895 0.00 0.00 39.27 3.85
4187 4529 1.522580 GGCTCCATGAAGCTCGGTC 60.523 63.158 3.19 0.00 42.13 4.79
4188 4530 2.586792 GGCTCCATGAAGCTCGGT 59.413 61.111 3.19 0.00 42.13 4.69
4189 4531 2.203126 GGGCTCCATGAAGCTCGG 60.203 66.667 3.19 0.00 42.13 4.63
4191 4533 2.717639 TAAAGGGCTCCATGAAGCTC 57.282 50.000 3.19 0.00 43.47 4.09
4192 4534 3.677156 AATAAAGGGCTCCATGAAGCT 57.323 42.857 3.19 0.00 42.13 3.74
4193 4535 4.160252 TCAAAATAAAGGGCTCCATGAAGC 59.840 41.667 0.00 0.00 41.73 3.86
4194 4536 5.920193 TCAAAATAAAGGGCTCCATGAAG 57.080 39.130 0.00 0.00 0.00 3.02
4195 4537 6.678568 TTTCAAAATAAAGGGCTCCATGAA 57.321 33.333 0.00 0.00 0.00 2.57
4196 4538 6.678568 TTTTCAAAATAAAGGGCTCCATGA 57.321 33.333 0.00 0.00 0.00 3.07
4197 4539 7.926674 ATTTTTCAAAATAAAGGGCTCCATG 57.073 32.000 0.00 0.00 36.88 3.66
4198 4540 8.162746 TGAATTTTTCAAAATAAAGGGCTCCAT 58.837 29.630 0.00 0.00 37.62 3.41
4199 4541 7.512992 TGAATTTTTCAAAATAAAGGGCTCCA 58.487 30.769 0.00 0.00 37.62 3.86
4200 4542 7.977789 TGAATTTTTCAAAATAAAGGGCTCC 57.022 32.000 0.00 0.00 37.62 4.70
4259 4601 8.313292 ACATCCTTGCATACATGTGTAATTTTT 58.687 29.630 9.11 0.00 33.76 1.94
4260 4602 7.839907 ACATCCTTGCATACATGTGTAATTTT 58.160 30.769 9.11 0.00 33.76 1.82
4261 4603 7.408756 ACATCCTTGCATACATGTGTAATTT 57.591 32.000 9.11 0.00 33.76 1.82
4262 4604 8.518430 TTACATCCTTGCATACATGTGTAATT 57.482 30.769 9.11 0.00 33.76 1.40
4263 4605 8.518430 TTTACATCCTTGCATACATGTGTAAT 57.482 30.769 9.11 0.00 32.76 1.89
4264 4606 7.609918 ACTTTACATCCTTGCATACATGTGTAA 59.390 33.333 9.11 1.48 33.76 2.41
4265 4607 7.065683 CACTTTACATCCTTGCATACATGTGTA 59.934 37.037 9.11 0.00 31.83 2.90
4266 4608 5.945784 ACTTTACATCCTTGCATACATGTGT 59.054 36.000 9.11 0.00 31.83 3.72
4267 4609 6.127925 ACACTTTACATCCTTGCATACATGTG 60.128 38.462 9.11 0.00 31.83 3.21
4268 4610 5.945784 ACACTTTACATCCTTGCATACATGT 59.054 36.000 2.69 2.69 33.95 3.21
4269 4611 6.441093 ACACTTTACATCCTTGCATACATG 57.559 37.500 0.00 0.00 0.00 3.21
4270 4612 7.775093 ACATACACTTTACATCCTTGCATACAT 59.225 33.333 0.00 0.00 0.00 2.29
4271 4613 7.065683 CACATACACTTTACATCCTTGCATACA 59.934 37.037 0.00 0.00 0.00 2.29
4272 4614 7.065803 ACACATACACTTTACATCCTTGCATAC 59.934 37.037 0.00 0.00 0.00 2.39
4273 4615 7.065683 CACACATACACTTTACATCCTTGCATA 59.934 37.037 0.00 0.00 0.00 3.14
4274 4616 5.945784 ACACATACACTTTACATCCTTGCAT 59.054 36.000 0.00 0.00 0.00 3.96
4275 4617 5.181056 CACACATACACTTTACATCCTTGCA 59.819 40.000 0.00 0.00 0.00 4.08
4276 4618 5.411361 TCACACATACACTTTACATCCTTGC 59.589 40.000 0.00 0.00 0.00 4.01
4277 4619 7.433708 TTCACACATACACTTTACATCCTTG 57.566 36.000 0.00 0.00 0.00 3.61
4278 4620 8.458573 TTTTCACACATACACTTTACATCCTT 57.541 30.769 0.00 0.00 0.00 3.36
4279 4621 8.635765 ATTTTCACACATACACTTTACATCCT 57.364 30.769 0.00 0.00 0.00 3.24
4280 4622 9.691362 AAATTTTCACACATACACTTTACATCC 57.309 29.630 0.00 0.00 0.00 3.51
4285 4627 9.743057 CCTGAAAATTTTCACACATACACTTTA 57.257 29.630 26.01 4.03 41.88 1.85
4286 4628 8.474025 TCCTGAAAATTTTCACACATACACTTT 58.526 29.630 26.01 0.00 41.88 2.66
4287 4629 8.006298 TCCTGAAAATTTTCACACATACACTT 57.994 30.769 26.01 0.00 41.88 3.16
4288 4630 7.581213 TCCTGAAAATTTTCACACATACACT 57.419 32.000 26.01 0.00 41.88 3.55
4289 4631 8.081633 TCATCCTGAAAATTTTCACACATACAC 58.918 33.333 26.01 1.31 41.88 2.90
4290 4632 8.175925 TCATCCTGAAAATTTTCACACATACA 57.824 30.769 26.01 6.95 41.88 2.29
4291 4633 9.474920 TTTCATCCTGAAAATTTTCACACATAC 57.525 29.630 26.01 2.67 42.72 2.39
4306 4648 7.284261 TCGCAATATTTGGTATTTCATCCTGAA 59.716 33.333 0.00 0.00 34.03 3.02
4307 4649 6.770303 TCGCAATATTTGGTATTTCATCCTGA 59.230 34.615 0.00 0.00 30.53 3.86
4308 4650 6.969366 TCGCAATATTTGGTATTTCATCCTG 58.031 36.000 0.00 0.00 30.53 3.86
4309 4651 6.294176 GCTCGCAATATTTGGTATTTCATCCT 60.294 38.462 0.00 0.00 30.53 3.24
4310 4652 5.858581 GCTCGCAATATTTGGTATTTCATCC 59.141 40.000 0.00 0.00 30.53 3.51
4311 4653 6.580041 CAGCTCGCAATATTTGGTATTTCATC 59.420 38.462 0.00 0.00 30.53 2.92
4312 4654 6.441274 CAGCTCGCAATATTTGGTATTTCAT 58.559 36.000 0.00 0.00 30.53 2.57
4313 4655 5.733091 GCAGCTCGCAATATTTGGTATTTCA 60.733 40.000 3.64 0.00 41.79 2.69
4314 4656 4.676924 GCAGCTCGCAATATTTGGTATTTC 59.323 41.667 3.64 0.00 41.79 2.17
4315 4657 4.610945 GCAGCTCGCAATATTTGGTATTT 58.389 39.130 3.64 0.00 41.79 1.40
4316 4658 4.228912 GCAGCTCGCAATATTTGGTATT 57.771 40.909 3.64 0.00 41.79 1.89
4317 4659 3.904136 GCAGCTCGCAATATTTGGTAT 57.096 42.857 3.64 0.00 41.79 2.73
4345 4687 9.918630 CTGTTCATCTTTAAAGTCCATGATTTT 57.081 29.630 14.74 0.00 0.00 1.82
4346 4688 9.082313 ACTGTTCATCTTTAAAGTCCATGATTT 57.918 29.630 14.74 0.00 0.00 2.17
4347 4689 8.641498 ACTGTTCATCTTTAAAGTCCATGATT 57.359 30.769 14.74 1.07 0.00 2.57
4348 4690 9.167311 GTACTGTTCATCTTTAAAGTCCATGAT 57.833 33.333 14.74 5.19 0.00 2.45
4349 4691 8.154203 TGTACTGTTCATCTTTAAAGTCCATGA 58.846 33.333 14.74 13.14 0.00 3.07
4350 4692 8.322906 TGTACTGTTCATCTTTAAAGTCCATG 57.677 34.615 14.74 11.19 0.00 3.66
4354 4696 9.922305 GCATATGTACTGTTCATCTTTAAAGTC 57.078 33.333 14.74 3.45 0.00 3.01
4355 4697 9.672673 AGCATATGTACTGTTCATCTTTAAAGT 57.327 29.630 14.74 0.22 0.00 2.66
4362 4704 8.616076 GCTTTTTAGCATATGTACTGTTCATCT 58.384 33.333 4.29 0.00 34.41 2.90
4363 4705 7.857885 GGCTTTTTAGCATATGTACTGTTCATC 59.142 37.037 4.29 0.00 36.33 2.92
4364 4706 7.201821 GGGCTTTTTAGCATATGTACTGTTCAT 60.202 37.037 4.29 5.26 36.33 2.57
4365 4707 6.094881 GGGCTTTTTAGCATATGTACTGTTCA 59.905 38.462 4.29 0.00 36.33 3.18
4366 4708 6.459710 GGGGCTTTTTAGCATATGTACTGTTC 60.460 42.308 4.29 0.00 36.33 3.18
4367 4709 5.359860 GGGGCTTTTTAGCATATGTACTGTT 59.640 40.000 4.29 0.00 36.33 3.16
4368 4710 4.887655 GGGGCTTTTTAGCATATGTACTGT 59.112 41.667 4.29 0.00 36.33 3.55
4369 4711 4.887071 TGGGGCTTTTTAGCATATGTACTG 59.113 41.667 4.29 0.00 36.33 2.74
4370 4712 5.104109 TCTGGGGCTTTTTAGCATATGTACT 60.104 40.000 4.29 0.00 36.33 2.73
4371 4713 5.130350 TCTGGGGCTTTTTAGCATATGTAC 58.870 41.667 4.29 0.00 36.33 2.90
4372 4714 5.381184 TCTGGGGCTTTTTAGCATATGTA 57.619 39.130 4.29 0.00 36.33 2.29
4373 4715 4.249638 TCTGGGGCTTTTTAGCATATGT 57.750 40.909 4.29 0.00 36.33 2.29
4374 4716 5.796424 AATCTGGGGCTTTTTAGCATATG 57.204 39.130 0.00 0.00 36.33 1.78
4375 4717 5.662657 ACAAATCTGGGGCTTTTTAGCATAT 59.337 36.000 0.00 0.00 36.33 1.78
4376 4718 5.022787 ACAAATCTGGGGCTTTTTAGCATA 58.977 37.500 0.00 0.00 36.33 3.14
4377 4719 3.840078 ACAAATCTGGGGCTTTTTAGCAT 59.160 39.130 0.00 0.00 36.33 3.79
4378 4720 3.238597 ACAAATCTGGGGCTTTTTAGCA 58.761 40.909 0.00 0.00 36.33 3.49
4379 4721 3.511540 AGACAAATCTGGGGCTTTTTAGC 59.488 43.478 0.00 0.00 32.29 3.09
4380 4722 5.728637 AAGACAAATCTGGGGCTTTTTAG 57.271 39.130 0.00 0.00 34.48 1.85
4381 4723 6.493189 AAAAGACAAATCTGGGGCTTTTTA 57.507 33.333 0.00 0.00 34.48 1.52
4382 4724 5.372343 AAAAGACAAATCTGGGGCTTTTT 57.628 34.783 0.00 0.00 34.48 1.94
4383 4725 5.372343 AAAAAGACAAATCTGGGGCTTTT 57.628 34.783 0.00 0.00 35.69 2.27
4408 4750 9.237187 TCCAAATACAATAAAATGTGAGCTACA 57.763 29.630 0.00 0.00 44.87 2.74
4409 4751 9.503427 GTCCAAATACAATAAAATGTGAGCTAC 57.497 33.333 0.00 0.00 34.75 3.58
4410 4752 8.682710 GGTCCAAATACAATAAAATGTGAGCTA 58.317 33.333 0.00 0.00 34.75 3.32
4411 4753 7.397192 AGGTCCAAATACAATAAAATGTGAGCT 59.603 33.333 0.00 0.00 34.75 4.09
4412 4754 7.547227 AGGTCCAAATACAATAAAATGTGAGC 58.453 34.615 0.00 0.00 34.75 4.26
4423 4765 8.998377 GTGCAAATTTTTAGGTCCAAATACAAT 58.002 29.630 0.00 0.00 0.00 2.71
4424 4766 7.987458 TGTGCAAATTTTTAGGTCCAAATACAA 59.013 29.630 0.00 0.00 0.00 2.41
4425 4767 7.500992 TGTGCAAATTTTTAGGTCCAAATACA 58.499 30.769 0.00 0.00 0.00 2.29
4426 4768 7.870445 TCTGTGCAAATTTTTAGGTCCAAATAC 59.130 33.333 0.00 0.00 0.00 1.89
4427 4769 7.957002 TCTGTGCAAATTTTTAGGTCCAAATA 58.043 30.769 0.00 0.00 0.00 1.40
4428 4770 6.825610 TCTGTGCAAATTTTTAGGTCCAAAT 58.174 32.000 0.00 0.00 0.00 2.32
4429 4771 6.227298 TCTGTGCAAATTTTTAGGTCCAAA 57.773 33.333 0.00 0.00 0.00 3.28
4430 4772 5.860941 TCTGTGCAAATTTTTAGGTCCAA 57.139 34.783 0.00 0.00 0.00 3.53
4431 4773 5.304101 ACATCTGTGCAAATTTTTAGGTCCA 59.696 36.000 0.00 0.00 0.00 4.02
4432 4774 5.783111 ACATCTGTGCAAATTTTTAGGTCC 58.217 37.500 0.00 0.00 0.00 4.46
4519 4861 9.332502 GGAGGCCTTTATTTGAAAACTTTAAAA 57.667 29.630 6.77 0.00 0.00 1.52
4520 4862 8.487028 TGGAGGCCTTTATTTGAAAACTTTAAA 58.513 29.630 6.77 0.00 0.00 1.52
4521 4863 8.024145 TGGAGGCCTTTATTTGAAAACTTTAA 57.976 30.769 6.77 0.00 0.00 1.52
4522 4864 7.604657 TGGAGGCCTTTATTTGAAAACTTTA 57.395 32.000 6.77 0.00 0.00 1.85
4523 4865 6.493189 TGGAGGCCTTTATTTGAAAACTTT 57.507 33.333 6.77 0.00 0.00 2.66
4524 4866 6.466812 CATGGAGGCCTTTATTTGAAAACTT 58.533 36.000 6.77 0.00 0.00 2.66
4525 4867 5.046376 CCATGGAGGCCTTTATTTGAAAACT 60.046 40.000 6.77 0.00 0.00 2.66
4526 4868 5.046663 TCCATGGAGGCCTTTATTTGAAAAC 60.047 40.000 11.44 0.00 37.29 2.43
4527 4869 5.090139 TCCATGGAGGCCTTTATTTGAAAA 58.910 37.500 11.44 0.00 37.29 2.29
4528 4870 4.682563 TCCATGGAGGCCTTTATTTGAAA 58.317 39.130 11.44 0.00 37.29 2.69
4529 4871 4.280819 CTCCATGGAGGCCTTTATTTGAA 58.719 43.478 31.14 0.00 38.51 2.69
4530 4872 3.902218 CTCCATGGAGGCCTTTATTTGA 58.098 45.455 31.14 3.17 38.51 2.69
4531 4873 2.363359 GCTCCATGGAGGCCTTTATTTG 59.637 50.000 36.92 13.51 42.19 2.32
4532 4874 2.670939 GCTCCATGGAGGCCTTTATTT 58.329 47.619 36.92 0.00 42.19 1.40
4533 4875 2.371658 GCTCCATGGAGGCCTTTATT 57.628 50.000 36.92 0.00 42.19 1.40
4541 4883 3.866582 GACCGGGCTCCATGGAGG 61.867 72.222 36.92 26.01 42.19 4.30
4542 4884 2.765807 AGACCGGGCTCCATGGAG 60.766 66.667 33.73 33.73 44.56 3.86
4543 4885 2.764128 GAGACCGGGCTCCATGGA 60.764 66.667 28.29 15.27 0.00 3.41
4555 4897 1.401018 CGAAAATGCCAAACGGAGACC 60.401 52.381 0.00 0.00 0.00 3.85
4556 4898 1.533731 TCGAAAATGCCAAACGGAGAC 59.466 47.619 0.00 0.00 0.00 3.36
4557 4899 1.885560 TCGAAAATGCCAAACGGAGA 58.114 45.000 0.00 0.00 0.00 3.71
4558 4900 2.697431 TTCGAAAATGCCAAACGGAG 57.303 45.000 0.00 0.00 0.00 4.63
4559 4901 3.651803 ATTTCGAAAATGCCAAACGGA 57.348 38.095 15.66 0.00 0.00 4.69
4560 4902 3.492756 ACAATTTCGAAAATGCCAAACGG 59.507 39.130 22.69 0.72 0.00 4.44
4561 4903 4.444468 CACAATTTCGAAAATGCCAAACG 58.556 39.130 22.69 1.39 0.00 3.60
4562 4904 4.024977 AGCACAATTTCGAAAATGCCAAAC 60.025 37.500 27.73 14.59 33.50 2.93
4563 4905 4.125703 AGCACAATTTCGAAAATGCCAAA 58.874 34.783 27.73 3.48 33.50 3.28
4564 4906 3.726607 AGCACAATTTCGAAAATGCCAA 58.273 36.364 27.73 4.13 33.50 4.52
4565 4907 3.383620 AGCACAATTTCGAAAATGCCA 57.616 38.095 27.73 4.78 33.50 4.92
4566 4908 6.407475 AATTAGCACAATTTCGAAAATGCC 57.593 33.333 27.73 18.91 33.50 4.40
4567 4909 9.623687 GATTAATTAGCACAATTTCGAAAATGC 57.376 29.630 25.74 25.74 0.00 3.56
4571 4913 8.859156 GCAAGATTAATTAGCACAATTTCGAAA 58.141 29.630 13.91 13.91 0.00 3.46
4572 4914 7.487829 GGCAAGATTAATTAGCACAATTTCGAA 59.512 33.333 0.00 0.00 0.00 3.71
4573 4915 6.972328 GGCAAGATTAATTAGCACAATTTCGA 59.028 34.615 9.09 0.00 0.00 3.71
4574 4916 6.751425 TGGCAAGATTAATTAGCACAATTTCG 59.249 34.615 9.09 0.00 0.00 3.46
4575 4917 8.652810 ATGGCAAGATTAATTAGCACAATTTC 57.347 30.769 0.00 0.00 0.00 2.17
4576 4918 9.452287 AAATGGCAAGATTAATTAGCACAATTT 57.548 25.926 0.00 8.51 0.00 1.82
4577 4919 9.101655 GAAATGGCAAGATTAATTAGCACAATT 57.898 29.630 0.00 2.39 0.00 2.32
4635 5040 6.588719 ACTGCACAAATTTAAGCCAATAGA 57.411 33.333 10.45 0.00 0.00 1.98
4636 5041 7.656707 AAACTGCACAAATTTAAGCCAATAG 57.343 32.000 10.45 5.13 0.00 1.73
4637 5042 9.717942 ATTAAACTGCACAAATTTAAGCCAATA 57.282 25.926 10.45 0.00 32.79 1.90
4754 5159 9.971922 CCTGACTTTGTTTCTTCAATATCTTTT 57.028 29.630 0.00 0.00 0.00 2.27
4893 5298 3.578716 TCTTGAACGGAGAAGAAGACCAT 59.421 43.478 0.00 0.00 0.00 3.55
4908 5314 1.659098 CCATAACGACGCCTCTTGAAC 59.341 52.381 0.00 0.00 0.00 3.18
4945 5351 3.306225 GCCATCTCCTGCAAATTTGACAA 60.306 43.478 22.31 5.51 0.00 3.18
4949 5355 2.232941 ACAGCCATCTCCTGCAAATTTG 59.767 45.455 14.03 14.03 33.65 2.32
4976 5382 2.768253 TAGGCCTGTTGTCAGATGTG 57.232 50.000 17.99 0.00 43.76 3.21
5135 5541 0.813184 ATGGCAAATGCGGAAGAGTG 59.187 50.000 0.00 0.00 43.26 3.51
5207 5613 3.256960 GGGGAGAGTGGTGGGCAA 61.257 66.667 0.00 0.00 0.00 4.52
5341 5747 1.333619 GAAAGCGCTTTGACAAGGTCA 59.666 47.619 38.09 0.00 41.09 4.02
5347 5753 1.202639 TCCTCAGAAAGCGCTTTGACA 60.203 47.619 38.09 19.76 32.11 3.58
5371 5777 3.089838 CCACCCATTGCCCTCTCA 58.910 61.111 0.00 0.00 0.00 3.27
5514 5920 1.351430 TTATGCAGCACGAGTGTCGC 61.351 55.000 0.00 8.28 45.12 5.19
5519 5925 6.435430 TTTGAAATATTATGCAGCACGAGT 57.565 33.333 0.00 0.00 0.00 4.18
5550 5957 0.917259 CAACGGCGATCTTCTCTTCG 59.083 55.000 16.62 0.00 38.37 3.79
5575 5982 8.463930 AGTGAAAATCAACTCAGGAAACATAA 57.536 30.769 0.00 0.00 0.00 1.90
5577 5984 6.966534 AGTGAAAATCAACTCAGGAAACAT 57.033 33.333 0.00 0.00 0.00 2.71
5622 6029 4.326826 CAATATACAGCCCATACACCAGG 58.673 47.826 0.00 0.00 0.00 4.45
5625 6032 3.750371 TGCAATATACAGCCCATACACC 58.250 45.455 0.00 0.00 0.00 4.16
5771 6179 5.174035 GTGATCGTCGAATATTGTTGGAGAG 59.826 44.000 0.00 0.00 0.00 3.20
5772 6180 5.041287 GTGATCGTCGAATATTGTTGGAGA 58.959 41.667 0.00 0.00 0.00 3.71
5773 6181 4.209288 GGTGATCGTCGAATATTGTTGGAG 59.791 45.833 0.00 0.00 0.00 3.86
5774 6182 4.116961 GGTGATCGTCGAATATTGTTGGA 58.883 43.478 0.00 0.00 0.00 3.53
5775 6183 3.247648 GGGTGATCGTCGAATATTGTTGG 59.752 47.826 0.00 0.00 0.00 3.77
5777 6185 3.120792 CGGGTGATCGTCGAATATTGTT 58.879 45.455 0.00 0.00 0.00 2.83
5778 6186 2.100252 ACGGGTGATCGTCGAATATTGT 59.900 45.455 0.00 0.00 39.34 2.71
5782 6190 2.164017 TCAAACGGGTGATCGTCGAATA 59.836 45.455 0.00 0.00 43.07 1.75
5786 6197 0.388134 ACTCAAACGGGTGATCGTCG 60.388 55.000 0.00 1.51 43.07 5.12
5789 6200 1.871039 ACAAACTCAAACGGGTGATCG 59.129 47.619 0.00 0.00 0.00 3.69
5795 6206 5.233263 CCAAAATAACACAAACTCAAACGGG 59.767 40.000 0.00 0.00 0.00 5.28
5796 6207 5.808030 ACCAAAATAACACAAACTCAAACGG 59.192 36.000 0.00 0.00 0.00 4.44
5798 6209 8.920509 AGTACCAAAATAACACAAACTCAAAC 57.079 30.769 0.00 0.00 0.00 2.93
5801 6212 8.740906 TGAAAGTACCAAAATAACACAAACTCA 58.259 29.630 0.00 0.00 0.00 3.41
5821 6232 4.924305 AGTGCAACATTCATGTGAAAGT 57.076 36.364 0.00 0.00 41.61 2.66
5823 6234 9.755804 TTTATTTAGTGCAACATTCATGTGAAA 57.244 25.926 0.00 0.00 41.61 2.69
5864 6285 9.410556 GTGCAATAATCATGAAGTAAAACAACT 57.589 29.630 0.00 0.00 0.00 3.16
6164 6602 4.759693 TGAGACTGTTGTTGTTGTTGTTCT 59.240 37.500 0.00 0.00 0.00 3.01
6166 6604 5.219633 GTTGAGACTGTTGTTGTTGTTGTT 58.780 37.500 0.00 0.00 0.00 2.83
6167 6605 4.320935 GGTTGAGACTGTTGTTGTTGTTGT 60.321 41.667 0.00 0.00 0.00 3.32
6168 6606 4.082787 AGGTTGAGACTGTTGTTGTTGTTG 60.083 41.667 0.00 0.00 0.00 3.33
6169 6607 4.079253 AGGTTGAGACTGTTGTTGTTGTT 58.921 39.130 0.00 0.00 0.00 2.83
6170 6608 3.686016 AGGTTGAGACTGTTGTTGTTGT 58.314 40.909 0.00 0.00 0.00 3.32
6171 6609 4.876107 ACTAGGTTGAGACTGTTGTTGTTG 59.124 41.667 0.00 0.00 0.00 3.33
6204 6643 4.506654 GTCGGCATTTCAGTATCATTACGT 59.493 41.667 0.00 0.00 33.32 3.57
6205 6644 4.506288 TGTCGGCATTTCAGTATCATTACG 59.494 41.667 0.00 0.00 33.32 3.18
6275 6715 6.045318 GCTGCTAGTTCATTGTTGAGATCTA 58.955 40.000 0.00 0.00 32.27 1.98
6587 7027 7.792374 TTTATTCGAATTGCTGAGCTCTAAT 57.208 32.000 17.19 10.05 0.00 1.73
6619 7059 4.585879 GCCCTGTCTGTTGTTTTAGGATA 58.414 43.478 0.00 0.00 0.00 2.59
6636 7092 3.674753 GTCATTTGAATTGTTTCGCCCTG 59.325 43.478 0.00 0.00 34.39 4.45



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.