Multiple sequence alignment - TraesCS6D01G182800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G182800 chr6D 100.000 1608 0 0 1496 3103 217759632 217758025 0.000000e+00 2970.0
1 TraesCS6D01G182800 chr6D 100.000 1278 0 0 1 1278 217761127 217759850 0.000000e+00 2361.0
2 TraesCS6D01G182800 chr6D 87.162 296 28 6 2813 3103 217757950 217758240 8.300000e-86 327.0
3 TraesCS6D01G182800 chr6D 96.040 202 5 2 2816 3014 345168379 345168580 2.980000e-85 326.0
4 TraesCS6D01G182800 chr6D 94.505 91 4 1 3014 3103 77411821 77411731 4.170000e-29 139.0
5 TraesCS6D01G182800 chr6A 96.844 1109 19 2 1496 2601 313298414 313297319 0.000000e+00 1840.0
6 TraesCS6D01G182800 chr6A 91.955 808 60 5 1 805 313324577 313323772 0.000000e+00 1127.0
7 TraesCS6D01G182800 chr6A 96.998 433 10 1 846 1278 313298813 313298384 0.000000e+00 725.0
8 TraesCS6D01G182800 chr6A 97.525 202 5 0 2445 2646 313297296 313297095 2.290000e-91 346.0
9 TraesCS6D01G182800 chr6A 79.348 184 28 6 647 821 572331679 572331861 1.510000e-23 121.0
10 TraesCS6D01G182800 chr6B 97.459 905 16 3 1496 2396 367349564 367350465 0.000000e+00 1537.0
11 TraesCS6D01G182800 chr6B 87.529 1291 118 13 1 1278 366168645 366167385 0.000000e+00 1452.0
12 TraesCS6D01G182800 chr6B 89.786 793 74 6 1 789 367336162 367336951 0.000000e+00 1009.0
13 TraesCS6D01G182800 chr6B 97.598 333 8 0 946 1278 367349262 367349594 3.470000e-159 571.0
14 TraesCS6D01G182800 chr6B 94.717 265 13 1 2382 2646 367364000 367364263 8.010000e-111 411.0
15 TraesCS6D01G182800 chr6B 94.717 265 11 2 2382 2646 366024910 366024649 2.880000e-110 409.0
16 TraesCS6D01G182800 chr6B 91.964 224 13 4 1714 1936 366165238 366165019 3.010000e-80 309.0
17 TraesCS6D01G182800 chr6B 91.441 222 18 1 1496 1717 366167415 366167195 1.400000e-78 303.0
18 TraesCS6D01G182800 chr6B 86.982 169 8 5 2649 2817 18721187 18721341 8.840000e-41 178.0
19 TraesCS6D01G182800 chr6B 88.785 107 6 2 788 893 367349154 367349255 3.250000e-25 126.0
20 TraesCS6D01G182800 chr1B 80.217 829 132 26 1 820 67121284 67122089 7.410000e-166 593.0
21 TraesCS6D01G182800 chr1B 85.799 169 10 5 2649 2817 86778530 86778684 1.910000e-37 167.0
22 TraesCS6D01G182800 chr1B 81.768 181 29 4 646 822 117270778 117270598 6.930000e-32 148.0
23 TraesCS6D01G182800 chr1B 81.383 188 23 8 647 824 300270647 300270832 3.230000e-30 143.0
24 TraesCS6D01G182800 chr1B 80.423 189 24 11 648 825 646985643 646985829 6.980000e-27 132.0
25 TraesCS6D01G182800 chr1B 75.543 184 33 8 648 824 592572107 592571929 2.570000e-11 80.5
26 TraesCS6D01G182800 chr4D 97.000 200 5 1 2816 3014 307364768 307364569 4.960000e-88 335.0
27 TraesCS6D01G182800 chr4D 96.000 200 7 1 2816 3014 118668982 118668783 1.070000e-84 324.0
28 TraesCS6D01G182800 chr4D 76.503 183 33 5 648 820 391017477 391017295 1.190000e-14 91.6
29 TraesCS6D01G182800 chr4D 95.455 44 0 2 779 820 66319744 66319787 5.550000e-08 69.4
30 TraesCS6D01G182800 chr2D 97.000 200 5 1 2816 3014 478093520 478093719 4.960000e-88 335.0
31 TraesCS6D01G182800 chr2D 93.868 212 10 3 2804 3014 418385735 418385944 1.800000e-82 316.0
32 TraesCS6D01G182800 chr2D 85.465 172 8 7 2649 2817 494637095 494637252 2.480000e-36 163.0
33 TraesCS6D01G182800 chr5D 96.500 200 6 1 2816 3014 105860389 105860588 2.310000e-86 329.0
34 TraesCS6D01G182800 chr5D 94.505 91 4 1 3014 3103 226938345 226938435 4.170000e-29 139.0
35 TraesCS6D01G182800 chr5D 94.505 91 4 1 3014 3103 346657455 346657365 4.170000e-29 139.0
36 TraesCS6D01G182800 chr1D 96.000 200 7 1 2816 3014 157783475 157783674 1.070000e-84 324.0
37 TraesCS6D01G182800 chr1D 95.169 207 5 2 2815 3016 198056362 198056156 3.860000e-84 322.0
38 TraesCS6D01G182800 chr1D 83.616 177 27 2 646 820 462182901 462182725 6.880000e-37 165.0
39 TraesCS6D01G182800 chr1D 94.505 91 4 1 3014 3103 295284187 295284277 4.170000e-29 139.0
40 TraesCS6D01G182800 chr1D 81.111 180 25 7 648 821 431797776 431797952 5.400000e-28 135.0
41 TraesCS6D01G182800 chr5B 93.458 214 11 2 2804 3014 293995564 293995777 6.460000e-82 315.0
42 TraesCS6D01G182800 chr5B 78.571 182 28 9 648 823 63735754 63735578 3.270000e-20 110.0
43 TraesCS6D01G182800 chr5B 76.923 182 28 10 648 821 548382519 548382344 1.190000e-14 91.6
44 TraesCS6D01G182800 chr5B 87.719 57 5 1 766 820 542318525 542318581 7.180000e-07 65.8
45 TraesCS6D01G182800 chr7D 87.059 170 7 6 2649 2817 185808225 185808070 8.840000e-41 178.0
46 TraesCS6D01G182800 chr7D 86.982 169 8 5 2649 2817 536314712 536314866 8.840000e-41 178.0
47 TraesCS6D01G182800 chr7D 78.165 316 37 23 2816 3103 219883084 219883395 4.110000e-39 172.0
48 TraesCS6D01G182800 chr7D 94.505 91 4 1 3014 3103 80353375 80353285 4.170000e-29 139.0
49 TraesCS6D01G182800 chr7D 94.505 91 4 1 3014 3103 487321970 487322060 4.170000e-29 139.0
50 TraesCS6D01G182800 chr7D 94.505 91 4 1 3014 3103 541816101 541816011 4.170000e-29 139.0
51 TraesCS6D01G182800 chr7A 86.957 161 7 5 2657 2817 81105508 81105654 5.320000e-38 169.0
52 TraesCS6D01G182800 chr4A 85.799 169 10 5 2649 2817 718620350 718620504 1.910000e-37 167.0
53 TraesCS6D01G182800 chr4A 85.207 169 11 5 2649 2817 42786300 42786146 8.910000e-36 161.0
54 TraesCS6D01G182800 chr4A 84.302 172 13 6 2646 2817 628633969 628634126 4.140000e-34 156.0
55 TraesCS6D01G182800 chr4A 79.670 182 29 8 645 820 214995668 214995847 1.170000e-24 124.0
56 TraesCS6D01G182800 chr2A 81.143 175 29 4 648 820 761622987 761622815 1.500000e-28 137.0
57 TraesCS6D01G182800 chr3A 80.108 186 30 4 647 825 121464926 121464741 6.980000e-27 132.0
58 TraesCS6D01G182800 chr1A 80.328 183 27 5 647 820 561408815 561408633 2.510000e-26 130.0
59 TraesCS6D01G182800 chr7B 78.698 169 27 8 656 820 251130145 251129982 1.520000e-18 104.0
60 TraesCS6D01G182800 chr3B 78.453 181 24 11 648 820 106937746 106937919 1.520000e-18 104.0
61 TraesCS6D01G182800 chr3D 77.976 168 30 6 659 823 217602958 217602795 7.080000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G182800 chr6D 217758025 217761127 3102 True 2665.500000 2970 100.000000 1 3103 2 chr6D.!!$R2 3102
1 TraesCS6D01G182800 chr6A 313323772 313324577 805 True 1127.000000 1127 91.955000 1 805 1 chr6A.!!$R1 804
2 TraesCS6D01G182800 chr6A 313297095 313298813 1718 True 970.333333 1840 97.122333 846 2646 3 chr6A.!!$R2 1800
3 TraesCS6D01G182800 chr6B 367336162 367336951 789 False 1009.000000 1009 89.786000 1 789 1 chr6B.!!$F2 788
4 TraesCS6D01G182800 chr6B 367349154 367350465 1311 False 744.666667 1537 94.614000 788 2396 3 chr6B.!!$F4 1608
5 TraesCS6D01G182800 chr6B 366165019 366168645 3626 True 688.000000 1452 90.311333 1 1936 3 chr6B.!!$R2 1935
6 TraesCS6D01G182800 chr1B 67121284 67122089 805 False 593.000000 593 80.217000 1 820 1 chr1B.!!$F1 819


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 393 1.218316 GAGGACCAACGCCTCGAAT 59.782 57.895 0.0 0.0 42.22 3.34 F
554 560 1.227943 GTGTTGGTCTGCTGCTCCA 60.228 57.895 0.0 4.5 0.00 3.86 F
893 907 1.823899 GGCTATTTGGTCTGGCCCG 60.824 63.158 0.0 0.0 37.12 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1503 1522 0.458669 GGGACGTCGGAGCATAAGAA 59.541 55.0 9.92 0.0 0.0 2.52 R
1506 1525 0.974010 AAGGGGACGTCGGAGCATAA 60.974 55.0 9.92 0.0 0.0 1.90 R
2733 4895 0.611200 TGGTTACCGTGTGATGGGAG 59.389 55.0 0.00 0.0 0.0 4.30 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 3.198635 CCTCCCAGCATCTCTTCTTTACA 59.801 47.826 0.00 0.00 0.00 2.41
143 144 9.295825 TCTATGTCCGAATAATATTTGGCAATT 57.704 29.630 13.31 0.00 0.00 2.32
178 179 4.626287 GCTATGTGTTTCTTCCTGATGGGA 60.626 45.833 0.00 0.00 43.41 4.37
205 206 7.173390 AGAGATTCTACACTTTTGGTTTAGCAC 59.827 37.037 0.00 0.00 30.59 4.40
389 393 1.218316 GAGGACCAACGCCTCGAAT 59.782 57.895 0.00 0.00 42.22 3.34
403 407 3.181486 GCCTCGAATATGATGCGGATCTA 60.181 47.826 18.23 8.28 0.00 1.98
478 482 3.846588 TGAAGCAAGTCTATCCTCCCTTT 59.153 43.478 0.00 0.00 0.00 3.11
479 483 5.030147 TGAAGCAAGTCTATCCTCCCTTTA 58.970 41.667 0.00 0.00 0.00 1.85
554 560 1.227943 GTGTTGGTCTGCTGCTCCA 60.228 57.895 0.00 4.50 0.00 3.86
607 615 4.461081 TGTTGCAATACTTTGGTATGGTCC 59.539 41.667 0.59 0.00 38.50 4.46
664 672 2.765689 AGGGTGTCATTGGGTTTTCA 57.234 45.000 0.00 0.00 0.00 2.69
743 751 7.396419 CGTTGAACTCGTTTTTCTCTTTCTAA 58.604 34.615 0.00 0.00 0.00 2.10
748 756 8.989160 AACTCGTTTTTCTCTTTCTAATTTCG 57.011 30.769 0.00 0.00 0.00 3.46
776 784 7.802738 TCTGTTTGTCAGACCGTTATATTTTG 58.197 34.615 0.00 0.00 46.77 2.44
777 785 7.658167 TCTGTTTGTCAGACCGTTATATTTTGA 59.342 33.333 0.00 0.00 46.77 2.69
840 854 3.859903 TATTAGGGAGTCCGCTGGGGG 62.860 61.905 11.17 0.78 38.33 5.40
893 907 1.823899 GGCTATTTGGTCTGGCCCG 60.824 63.158 0.00 0.00 37.12 6.13
977 996 5.104402 CCCAAATTGCTAAATCCCCAAATCT 60.104 40.000 0.00 0.00 0.00 2.40
1515 1534 1.342819 CCTCCCTCTTCTTATGCTCCG 59.657 57.143 0.00 0.00 0.00 4.63
1516 1535 2.311463 CTCCCTCTTCTTATGCTCCGA 58.689 52.381 0.00 0.00 0.00 4.55
1517 1536 2.032620 TCCCTCTTCTTATGCTCCGAC 58.967 52.381 0.00 0.00 0.00 4.79
1518 1537 1.269309 CCCTCTTCTTATGCTCCGACG 60.269 57.143 0.00 0.00 0.00 5.12
1519 1538 1.405821 CCTCTTCTTATGCTCCGACGT 59.594 52.381 0.00 0.00 0.00 4.34
1520 1539 2.541999 CCTCTTCTTATGCTCCGACGTC 60.542 54.545 5.18 5.18 0.00 4.34
1521 1540 1.404391 TCTTCTTATGCTCCGACGTCC 59.596 52.381 10.58 0.00 0.00 4.79
1522 1541 0.458669 TTCTTATGCTCCGACGTCCC 59.541 55.000 10.58 0.00 0.00 4.46
1523 1542 1.067582 CTTATGCTCCGACGTCCCC 59.932 63.158 10.58 0.00 0.00 4.81
1524 1543 1.380785 TTATGCTCCGACGTCCCCT 60.381 57.895 10.58 0.00 0.00 4.79
1525 1544 0.974010 TTATGCTCCGACGTCCCCTT 60.974 55.000 10.58 0.00 0.00 3.95
2124 4103 1.204704 CCAGCGGTCTTGTATGTCAGA 59.795 52.381 0.00 0.00 0.00 3.27
2261 4240 9.249457 CGAAATGTGAATTAGCTCTGTCTTATA 57.751 33.333 0.00 0.00 0.00 0.98
2313 4293 3.623060 ACTTATGGCGAGCAACATTGTAG 59.377 43.478 0.00 0.00 0.00 2.74
2314 4294 2.113860 ATGGCGAGCAACATTGTAGT 57.886 45.000 0.00 0.00 0.00 2.73
2315 4295 2.753055 TGGCGAGCAACATTGTAGTA 57.247 45.000 0.00 0.00 0.00 1.82
2471 4454 1.406539 AGCACTTTGTTGCCTGTGAAG 59.593 47.619 0.00 0.00 44.14 3.02
2481 4464 1.340017 TGCCTGTGAAGTCTATTGCCC 60.340 52.381 0.00 0.00 0.00 5.36
2507 4490 7.591006 AAATACTTTGCATTGCTGAATCAAG 57.409 32.000 10.49 5.27 0.00 3.02
2518 4501 4.464008 TGCTGAATCAAGAACCTTCAACT 58.536 39.130 0.00 0.00 0.00 3.16
2646 4808 5.403766 CGCCTGCTAAGATGTAAATCACTAG 59.596 44.000 0.00 0.00 0.00 2.57
2647 4809 5.178438 GCCTGCTAAGATGTAAATCACTAGC 59.822 44.000 15.41 15.41 0.00 3.42
2648 4810 6.283694 CCTGCTAAGATGTAAATCACTAGCA 58.716 40.000 20.40 20.40 36.71 3.49
2649 4811 7.405469 CTGCTAAGATGTAAATCACTAGCAG 57.595 40.000 26.69 26.69 45.53 4.24
2650 4812 6.878317 TGCTAAGATGTAAATCACTAGCAGT 58.122 36.000 18.85 0.00 33.75 4.40
2652 4814 6.758886 GCTAAGATGTAAATCACTAGCAGTGT 59.241 38.462 16.62 1.43 46.03 3.55
2653 4815 7.921214 GCTAAGATGTAAATCACTAGCAGTGTA 59.079 37.037 16.62 4.46 46.03 2.90
2654 4816 9.239002 CTAAGATGTAAATCACTAGCAGTGTAC 57.761 37.037 13.59 10.38 46.03 2.90
2655 4817 7.170393 AGATGTAAATCACTAGCAGTGTACA 57.830 36.000 13.59 14.11 46.03 2.90
2656 4818 7.786030 AGATGTAAATCACTAGCAGTGTACAT 58.214 34.615 19.23 19.23 46.03 2.29
2657 4819 8.066668 GATGTAAATCACTAGCAGTGTACATC 57.933 38.462 23.42 23.42 45.11 3.06
2658 4820 7.170393 TGTAAATCACTAGCAGTGTACATCT 57.830 36.000 0.00 0.00 46.03 2.90
2659 4821 8.288689 TGTAAATCACTAGCAGTGTACATCTA 57.711 34.615 0.00 0.81 46.03 1.98
2660 4822 8.406297 TGTAAATCACTAGCAGTGTACATCTAG 58.594 37.037 19.51 19.51 46.03 2.43
2661 4823 4.902443 TCACTAGCAGTGTACATCTAGC 57.098 45.455 20.37 13.44 46.03 3.42
2662 4824 4.527944 TCACTAGCAGTGTACATCTAGCT 58.472 43.478 20.37 18.00 46.03 3.32
2663 4825 4.950475 TCACTAGCAGTGTACATCTAGCTT 59.050 41.667 20.37 7.72 46.03 3.74
2664 4826 5.066634 TCACTAGCAGTGTACATCTAGCTTC 59.933 44.000 20.37 2.16 46.03 3.86
2665 4827 4.950475 ACTAGCAGTGTACATCTAGCTTCA 59.050 41.667 20.37 6.79 33.62 3.02
2666 4828 4.808414 AGCAGTGTACATCTAGCTTCAA 57.192 40.909 0.00 0.00 0.00 2.69
2667 4829 5.152623 AGCAGTGTACATCTAGCTTCAAA 57.847 39.130 0.00 0.00 0.00 2.69
2668 4830 5.738909 AGCAGTGTACATCTAGCTTCAAAT 58.261 37.500 0.00 0.00 0.00 2.32
2669 4831 6.176183 AGCAGTGTACATCTAGCTTCAAATT 58.824 36.000 0.00 0.00 0.00 1.82
2670 4832 6.656693 AGCAGTGTACATCTAGCTTCAAATTT 59.343 34.615 0.00 0.00 0.00 1.82
2671 4833 7.175641 AGCAGTGTACATCTAGCTTCAAATTTT 59.824 33.333 0.00 0.00 0.00 1.82
2672 4834 7.272084 GCAGTGTACATCTAGCTTCAAATTTTG 59.728 37.037 0.00 2.59 0.00 2.44
2673 4835 8.292448 CAGTGTACATCTAGCTTCAAATTTTGT 58.708 33.333 8.89 0.00 0.00 2.83
2674 4836 8.507249 AGTGTACATCTAGCTTCAAATTTTGTC 58.493 33.333 8.89 1.02 0.00 3.18
2675 4837 7.750903 GTGTACATCTAGCTTCAAATTTTGTCC 59.249 37.037 8.89 0.00 0.00 4.02
2676 4838 6.899393 ACATCTAGCTTCAAATTTTGTCCA 57.101 33.333 8.89 0.00 0.00 4.02
2677 4839 7.472334 ACATCTAGCTTCAAATTTTGTCCAT 57.528 32.000 8.89 0.00 0.00 3.41
2678 4840 8.579850 ACATCTAGCTTCAAATTTTGTCCATA 57.420 30.769 8.89 0.00 0.00 2.74
2679 4841 9.023962 ACATCTAGCTTCAAATTTTGTCCATAA 57.976 29.630 8.89 0.00 0.00 1.90
2680 4842 9.859427 CATCTAGCTTCAAATTTTGTCCATAAA 57.141 29.630 8.89 0.00 0.00 1.40
2682 4844 9.912634 TCTAGCTTCAAATTTTGTCCATAAAAG 57.087 29.630 8.89 4.95 33.49 2.27
2683 4845 9.912634 CTAGCTTCAAATTTTGTCCATAAAAGA 57.087 29.630 8.89 0.00 33.49 2.52
2684 4846 8.822652 AGCTTCAAATTTTGTCCATAAAAGAG 57.177 30.769 8.89 0.00 33.49 2.85
2685 4847 8.424133 AGCTTCAAATTTTGTCCATAAAAGAGT 58.576 29.630 8.89 0.00 33.49 3.24
2686 4848 8.490355 GCTTCAAATTTTGTCCATAAAAGAGTG 58.510 33.333 8.89 0.00 33.49 3.51
2687 4849 9.533253 CTTCAAATTTTGTCCATAAAAGAGTGT 57.467 29.630 8.89 0.00 33.49 3.55
2689 4851 9.959749 TCAAATTTTGTCCATAAAAGAGTGTAC 57.040 29.630 8.89 0.00 33.49 2.90
2690 4852 9.965824 CAAATTTTGTCCATAAAAGAGTGTACT 57.034 29.630 0.78 0.00 33.49 2.73
2693 4855 8.974060 TTTTGTCCATAAAAGAGTGTACTTCT 57.026 30.769 0.00 0.00 0.00 2.85
2696 4858 9.871238 TTGTCCATAAAAGAGTGTACTTCTATC 57.129 33.333 0.00 0.00 0.00 2.08
2697 4859 9.256228 TGTCCATAAAAGAGTGTACTTCTATCT 57.744 33.333 0.00 0.00 0.00 1.98
2705 4867 9.442047 AAAGAGTGTACTTCTATCTTTCCAATG 57.558 33.333 0.00 0.00 35.82 2.82
2706 4868 7.044798 AGAGTGTACTTCTATCTTTCCAATGC 58.955 38.462 0.00 0.00 0.00 3.56
2707 4869 6.711277 AGTGTACTTCTATCTTTCCAATGCA 58.289 36.000 0.00 0.00 0.00 3.96
2708 4870 7.341805 AGTGTACTTCTATCTTTCCAATGCAT 58.658 34.615 0.00 0.00 0.00 3.96
2709 4871 7.831193 AGTGTACTTCTATCTTTCCAATGCATT 59.169 33.333 5.99 5.99 0.00 3.56
2710 4872 8.462016 GTGTACTTCTATCTTTCCAATGCATTT 58.538 33.333 9.83 0.00 0.00 2.32
2711 4873 9.023962 TGTACTTCTATCTTTCCAATGCATTTT 57.976 29.630 9.83 0.00 0.00 1.82
2717 4879 9.859427 TCTATCTTTCCAATGCATTTTAAAGTG 57.141 29.630 26.96 21.20 0.00 3.16
2718 4880 7.910441 ATCTTTCCAATGCATTTTAAAGTGG 57.090 32.000 26.96 18.61 0.00 4.00
2719 4881 6.229733 TCTTTCCAATGCATTTTAAAGTGGG 58.770 36.000 26.96 17.30 0.00 4.61
2720 4882 5.815233 TTCCAATGCATTTTAAAGTGGGA 57.185 34.783 9.83 7.97 0.00 4.37
2721 4883 5.815233 TCCAATGCATTTTAAAGTGGGAA 57.185 34.783 9.83 0.00 0.00 3.97
2722 4884 6.179906 TCCAATGCATTTTAAAGTGGGAAA 57.820 33.333 9.83 0.00 0.00 3.13
2723 4885 6.595682 TCCAATGCATTTTAAAGTGGGAAAA 58.404 32.000 9.83 0.00 0.00 2.29
2724 4886 7.056635 TCCAATGCATTTTAAAGTGGGAAAAA 58.943 30.769 9.83 0.00 0.00 1.94
2745 4907 4.392921 AATACTTCTCTCCCATCACACG 57.607 45.455 0.00 0.00 0.00 4.49
2746 4908 0.898320 ACTTCTCTCCCATCACACGG 59.102 55.000 0.00 0.00 0.00 4.94
2747 4909 0.898320 CTTCTCTCCCATCACACGGT 59.102 55.000 0.00 0.00 0.00 4.83
2748 4910 2.100197 CTTCTCTCCCATCACACGGTA 58.900 52.381 0.00 0.00 0.00 4.02
2749 4911 2.225382 TCTCTCCCATCACACGGTAA 57.775 50.000 0.00 0.00 0.00 2.85
2750 4912 1.822990 TCTCTCCCATCACACGGTAAC 59.177 52.381 0.00 0.00 0.00 2.50
2751 4913 0.899720 TCTCCCATCACACGGTAACC 59.100 55.000 0.00 0.00 0.00 2.85
2752 4914 0.611200 CTCCCATCACACGGTAACCA 59.389 55.000 0.00 0.00 0.00 3.67
2753 4915 1.002659 CTCCCATCACACGGTAACCAA 59.997 52.381 0.00 0.00 0.00 3.67
2754 4916 1.002659 TCCCATCACACGGTAACCAAG 59.997 52.381 0.00 0.00 0.00 3.61
2755 4917 1.002659 CCCATCACACGGTAACCAAGA 59.997 52.381 0.00 0.00 0.00 3.02
2756 4918 2.346803 CCATCACACGGTAACCAAGAG 58.653 52.381 0.00 0.00 0.00 2.85
2757 4919 2.289444 CCATCACACGGTAACCAAGAGT 60.289 50.000 0.00 0.00 0.00 3.24
2758 4920 2.806608 TCACACGGTAACCAAGAGTC 57.193 50.000 0.00 0.00 0.00 3.36
2759 4921 1.342174 TCACACGGTAACCAAGAGTCC 59.658 52.381 0.00 0.00 0.00 3.85
2760 4922 1.069513 CACACGGTAACCAAGAGTCCA 59.930 52.381 0.00 0.00 0.00 4.02
2761 4923 1.764134 ACACGGTAACCAAGAGTCCAA 59.236 47.619 0.00 0.00 0.00 3.53
2762 4924 2.224209 ACACGGTAACCAAGAGTCCAAG 60.224 50.000 0.00 0.00 0.00 3.61
2763 4925 2.036733 CACGGTAACCAAGAGTCCAAGA 59.963 50.000 0.00 0.00 0.00 3.02
2764 4926 2.036862 ACGGTAACCAAGAGTCCAAGAC 59.963 50.000 0.00 0.00 0.00 3.01
2765 4927 2.612221 CGGTAACCAAGAGTCCAAGACC 60.612 54.545 0.00 0.00 32.18 3.85
2766 4928 2.370849 GGTAACCAAGAGTCCAAGACCA 59.629 50.000 0.00 0.00 32.18 4.02
2767 4929 3.181448 GGTAACCAAGAGTCCAAGACCAA 60.181 47.826 0.00 0.00 32.18 3.67
2768 4930 3.884037 AACCAAGAGTCCAAGACCAAT 57.116 42.857 0.00 0.00 32.18 3.16
2769 4931 4.993705 AACCAAGAGTCCAAGACCAATA 57.006 40.909 0.00 0.00 32.18 1.90
2770 4932 4.559862 ACCAAGAGTCCAAGACCAATAG 57.440 45.455 0.00 0.00 32.18 1.73
2771 4933 3.274288 CCAAGAGTCCAAGACCAATAGC 58.726 50.000 0.00 0.00 32.18 2.97
2772 4934 3.307691 CCAAGAGTCCAAGACCAATAGCA 60.308 47.826 0.00 0.00 32.18 3.49
2773 4935 4.326826 CAAGAGTCCAAGACCAATAGCAA 58.673 43.478 0.00 0.00 32.18 3.91
2774 4936 4.851639 AGAGTCCAAGACCAATAGCAAT 57.148 40.909 0.00 0.00 32.18 3.56
2775 4937 4.775236 AGAGTCCAAGACCAATAGCAATC 58.225 43.478 0.00 0.00 32.18 2.67
2776 4938 4.472833 AGAGTCCAAGACCAATAGCAATCT 59.527 41.667 0.00 0.00 32.18 2.40
2777 4939 5.663106 AGAGTCCAAGACCAATAGCAATCTA 59.337 40.000 0.00 0.00 32.18 1.98
2778 4940 5.675538 AGTCCAAGACCAATAGCAATCTAC 58.324 41.667 0.00 0.00 32.18 2.59
2779 4941 5.426833 AGTCCAAGACCAATAGCAATCTACT 59.573 40.000 0.00 0.00 32.18 2.57
2780 4942 6.611642 AGTCCAAGACCAATAGCAATCTACTA 59.388 38.462 0.00 0.00 32.18 1.82
2781 4943 6.926272 GTCCAAGACCAATAGCAATCTACTAG 59.074 42.308 0.00 0.00 0.00 2.57
2782 4944 6.611642 TCCAAGACCAATAGCAATCTACTAGT 59.388 38.462 0.00 0.00 0.00 2.57
2783 4945 7.783119 TCCAAGACCAATAGCAATCTACTAGTA 59.217 37.037 1.89 1.89 0.00 1.82
2784 4946 7.868415 CCAAGACCAATAGCAATCTACTAGTAC 59.132 40.741 0.00 0.00 0.00 2.73
2785 4947 8.414003 CAAGACCAATAGCAATCTACTAGTACA 58.586 37.037 0.00 0.00 0.00 2.90
2786 4948 8.534954 AGACCAATAGCAATCTACTAGTACAA 57.465 34.615 0.00 0.00 0.00 2.41
2787 4949 8.978472 AGACCAATAGCAATCTACTAGTACAAA 58.022 33.333 0.00 0.00 0.00 2.83
2788 4950 9.765795 GACCAATAGCAATCTACTAGTACAAAT 57.234 33.333 0.00 0.00 0.00 2.32
2789 4951 9.547753 ACCAATAGCAATCTACTAGTACAAATG 57.452 33.333 0.00 0.00 0.00 2.32
2790 4952 8.993121 CCAATAGCAATCTACTAGTACAAATGG 58.007 37.037 0.00 0.00 0.00 3.16
2791 4953 9.547753 CAATAGCAATCTACTAGTACAAATGGT 57.452 33.333 0.00 4.67 0.00 3.55
2792 4954 9.765795 AATAGCAATCTACTAGTACAAATGGTC 57.234 33.333 0.00 0.00 0.00 4.02
2793 4955 7.425224 AGCAATCTACTAGTACAAATGGTCT 57.575 36.000 0.00 0.00 0.00 3.85
2794 4956 7.852263 AGCAATCTACTAGTACAAATGGTCTT 58.148 34.615 0.00 0.00 0.00 3.01
2795 4957 7.982354 AGCAATCTACTAGTACAAATGGTCTTC 59.018 37.037 0.00 0.00 0.00 2.87
2796 4958 7.982354 GCAATCTACTAGTACAAATGGTCTTCT 59.018 37.037 0.00 0.00 0.00 2.85
2797 4959 9.877178 CAATCTACTAGTACAAATGGTCTTCTT 57.123 33.333 0.00 0.00 0.00 2.52
2813 4975 8.934023 TGGTCTTCTTAATTTTTACATCCACT 57.066 30.769 0.00 0.00 0.00 4.00
2814 4976 9.362151 TGGTCTTCTTAATTTTTACATCCACTT 57.638 29.630 0.00 0.00 0.00 3.16
2825 4987 9.654663 ATTTTTACATCCACTTAGACTACTCAC 57.345 33.333 0.00 0.00 0.00 3.51
2826 4988 7.770366 TTTACATCCACTTAGACTACTCACA 57.230 36.000 0.00 0.00 0.00 3.58
2827 4989 7.770366 TTACATCCACTTAGACTACTCACAA 57.230 36.000 0.00 0.00 0.00 3.33
2828 4990 6.859112 ACATCCACTTAGACTACTCACAAT 57.141 37.500 0.00 0.00 0.00 2.71
2829 4991 6.634805 ACATCCACTTAGACTACTCACAATG 58.365 40.000 0.00 0.00 0.00 2.82
2830 4992 5.661056 TCCACTTAGACTACTCACAATGG 57.339 43.478 0.00 0.00 0.00 3.16
2831 4993 4.466370 TCCACTTAGACTACTCACAATGGG 59.534 45.833 0.00 0.00 0.00 4.00
2832 4994 4.466370 CCACTTAGACTACTCACAATGGGA 59.534 45.833 0.00 0.00 0.00 4.37
2833 4995 5.394663 CCACTTAGACTACTCACAATGGGAG 60.395 48.000 11.53 11.53 38.36 4.30
2834 4996 5.186021 CACTTAGACTACTCACAATGGGAGT 59.814 44.000 22.65 22.65 46.71 3.85
2835 4997 6.377429 CACTTAGACTACTCACAATGGGAGTA 59.623 42.308 22.46 22.46 43.50 2.59
2836 4998 6.952358 ACTTAGACTACTCACAATGGGAGTAA 59.048 38.462 23.71 11.40 44.69 2.24
2837 4999 5.662674 AGACTACTCACAATGGGAGTAAC 57.337 43.478 23.71 19.52 44.69 2.50
2838 5000 5.084519 AGACTACTCACAATGGGAGTAACA 58.915 41.667 23.71 6.62 44.69 2.41
2839 5001 5.721960 AGACTACTCACAATGGGAGTAACAT 59.278 40.000 23.71 13.59 44.69 2.71
2840 5002 6.895756 AGACTACTCACAATGGGAGTAACATA 59.104 38.462 23.71 5.90 44.69 2.29
2841 5003 7.068839 AGACTACTCACAATGGGAGTAACATAG 59.931 40.741 23.71 16.69 44.69 2.23
2842 5004 5.359194 ACTCACAATGGGAGTAACATAGG 57.641 43.478 17.66 0.00 43.50 2.57
2843 5005 4.783227 ACTCACAATGGGAGTAACATAGGT 59.217 41.667 17.66 0.00 43.50 3.08
2844 5006 5.962031 ACTCACAATGGGAGTAACATAGGTA 59.038 40.000 17.66 0.00 43.50 3.08
2845 5007 6.098409 ACTCACAATGGGAGTAACATAGGTAG 59.902 42.308 17.66 0.00 43.50 3.18
2846 5008 5.962031 TCACAATGGGAGTAACATAGGTAGT 59.038 40.000 0.00 0.00 0.00 2.73
2847 5009 7.127405 TCACAATGGGAGTAACATAGGTAGTA 58.873 38.462 0.00 0.00 0.00 1.82
2848 5010 7.620491 TCACAATGGGAGTAACATAGGTAGTAA 59.380 37.037 0.00 0.00 0.00 2.24
2849 5011 7.709613 CACAATGGGAGTAACATAGGTAGTAAC 59.290 40.741 0.00 0.00 0.00 2.50
2850 5012 7.400915 ACAATGGGAGTAACATAGGTAGTAACA 59.599 37.037 0.00 0.00 0.00 2.41
2851 5013 8.429641 CAATGGGAGTAACATAGGTAGTAACAT 58.570 37.037 0.00 0.00 0.00 2.71
2852 5014 7.592885 TGGGAGTAACATAGGTAGTAACATC 57.407 40.000 0.00 0.00 0.00 3.06
2853 5015 7.127405 TGGGAGTAACATAGGTAGTAACATCA 58.873 38.462 0.00 0.00 0.00 3.07
2854 5016 7.069085 TGGGAGTAACATAGGTAGTAACATCAC 59.931 40.741 0.00 0.00 0.00 3.06
2855 5017 7.069085 GGGAGTAACATAGGTAGTAACATCACA 59.931 40.741 0.00 0.00 0.00 3.58
2856 5018 7.919621 GGAGTAACATAGGTAGTAACATCACAC 59.080 40.741 0.00 0.00 0.00 3.82
2857 5019 8.357290 AGTAACATAGGTAGTAACATCACACA 57.643 34.615 0.00 0.00 0.00 3.72
2858 5020 8.978472 AGTAACATAGGTAGTAACATCACACAT 58.022 33.333 0.00 0.00 0.00 3.21
2861 5023 9.982651 AACATAGGTAGTAACATCACACATATC 57.017 33.333 0.00 0.00 0.00 1.63
2862 5024 9.143155 ACATAGGTAGTAACATCACACATATCA 57.857 33.333 0.00 0.00 0.00 2.15
2863 5025 9.981114 CATAGGTAGTAACATCACACATATCAA 57.019 33.333 0.00 0.00 0.00 2.57
2865 5027 8.306313 AGGTAGTAACATCACACATATCAAGA 57.694 34.615 0.00 0.00 0.00 3.02
2866 5028 8.928448 AGGTAGTAACATCACACATATCAAGAT 58.072 33.333 0.00 0.00 0.00 2.40
2886 5048 9.716531 TCAAGATAAAGTAGATGATATGGCAAG 57.283 33.333 0.00 0.00 0.00 4.01
2887 5049 8.449397 CAAGATAAAGTAGATGATATGGCAAGC 58.551 37.037 0.00 0.00 0.00 4.01
2888 5050 7.683578 AGATAAAGTAGATGATATGGCAAGCA 58.316 34.615 0.00 0.00 0.00 3.91
2889 5051 8.159447 AGATAAAGTAGATGATATGGCAAGCAA 58.841 33.333 0.00 0.00 0.00 3.91
2890 5052 8.874744 ATAAAGTAGATGATATGGCAAGCAAT 57.125 30.769 0.00 0.00 0.00 3.56
2891 5053 9.964354 ATAAAGTAGATGATATGGCAAGCAATA 57.036 29.630 0.00 0.00 0.00 1.90
2892 5054 8.696043 AAAGTAGATGATATGGCAAGCAATAA 57.304 30.769 0.00 0.00 0.00 1.40
2893 5055 8.696043 AAGTAGATGATATGGCAAGCAATAAA 57.304 30.769 0.00 0.00 0.00 1.40
2894 5056 8.874744 AGTAGATGATATGGCAAGCAATAAAT 57.125 30.769 0.00 0.00 0.00 1.40
2895 5057 8.737175 AGTAGATGATATGGCAAGCAATAAATG 58.263 33.333 0.00 0.00 0.00 2.32
2896 5058 7.770366 AGATGATATGGCAAGCAATAAATGA 57.230 32.000 0.00 0.00 0.00 2.57
2897 5059 8.185506 AGATGATATGGCAAGCAATAAATGAA 57.814 30.769 0.00 0.00 0.00 2.57
2898 5060 8.304596 AGATGATATGGCAAGCAATAAATGAAG 58.695 33.333 0.00 0.00 0.00 3.02
2899 5061 7.585579 TGATATGGCAAGCAATAAATGAAGA 57.414 32.000 0.00 0.00 0.00 2.87
2900 5062 8.009622 TGATATGGCAAGCAATAAATGAAGAA 57.990 30.769 0.00 0.00 0.00 2.52
2901 5063 8.476447 TGATATGGCAAGCAATAAATGAAGAAA 58.524 29.630 0.00 0.00 0.00 2.52
2902 5064 8.882415 ATATGGCAAGCAATAAATGAAGAAAG 57.118 30.769 0.00 0.00 0.00 2.62
2903 5065 6.343716 TGGCAAGCAATAAATGAAGAAAGA 57.656 33.333 0.00 0.00 0.00 2.52
2904 5066 6.392354 TGGCAAGCAATAAATGAAGAAAGAG 58.608 36.000 0.00 0.00 0.00 2.85
2905 5067 6.209192 TGGCAAGCAATAAATGAAGAAAGAGA 59.791 34.615 0.00 0.00 0.00 3.10
2906 5068 6.750963 GGCAAGCAATAAATGAAGAAAGAGAG 59.249 38.462 0.00 0.00 0.00 3.20
2907 5069 6.750963 GCAAGCAATAAATGAAGAAAGAGAGG 59.249 38.462 0.00 0.00 0.00 3.69
2908 5070 7.362401 GCAAGCAATAAATGAAGAAAGAGAGGA 60.362 37.037 0.00 0.00 0.00 3.71
2909 5071 8.517878 CAAGCAATAAATGAAGAAAGAGAGGAA 58.482 33.333 0.00 0.00 0.00 3.36
2910 5072 8.641498 AGCAATAAATGAAGAAAGAGAGGAAA 57.359 30.769 0.00 0.00 0.00 3.13
2911 5073 8.738106 AGCAATAAATGAAGAAAGAGAGGAAAG 58.262 33.333 0.00 0.00 0.00 2.62
2912 5074 8.518702 GCAATAAATGAAGAAAGAGAGGAAAGT 58.481 33.333 0.00 0.00 0.00 2.66
2913 5075 9.837525 CAATAAATGAAGAAAGAGAGGAAAGTG 57.162 33.333 0.00 0.00 0.00 3.16
2914 5076 6.890979 AAATGAAGAAAGAGAGGAAAGTGG 57.109 37.500 0.00 0.00 0.00 4.00
2915 5077 5.574970 ATGAAGAAAGAGAGGAAAGTGGT 57.425 39.130 0.00 0.00 0.00 4.16
2916 5078 6.688073 ATGAAGAAAGAGAGGAAAGTGGTA 57.312 37.500 0.00 0.00 0.00 3.25
2917 5079 6.494666 TGAAGAAAGAGAGGAAAGTGGTAA 57.505 37.500 0.00 0.00 0.00 2.85
2918 5080 6.289064 TGAAGAAAGAGAGGAAAGTGGTAAC 58.711 40.000 0.00 0.00 0.00 2.50
2954 5116 8.803397 ACTAGTAGTATGAGTAACATCACACA 57.197 34.615 0.00 0.00 40.07 3.72
2955 5117 9.409918 ACTAGTAGTATGAGTAACATCACACAT 57.590 33.333 0.00 0.00 40.07 3.21
2961 5123 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
2962 5124 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
2963 5125 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
2964 5126 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
2965 5127 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
2966 5128 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
2967 5129 4.592942 ACATCACACATATCAAGGCAAGT 58.407 39.130 0.00 0.00 0.00 3.16
2968 5130 5.012239 ACATCACACATATCAAGGCAAGTT 58.988 37.500 0.00 0.00 0.00 2.66
2969 5131 5.477984 ACATCACACATATCAAGGCAAGTTT 59.522 36.000 0.00 0.00 0.00 2.66
2970 5132 5.375417 TCACACATATCAAGGCAAGTTTG 57.625 39.130 0.00 0.00 0.00 2.93
2971 5133 4.826733 TCACACATATCAAGGCAAGTTTGT 59.173 37.500 0.00 0.00 0.00 2.83
2972 5134 5.048782 TCACACATATCAAGGCAAGTTTGTC 60.049 40.000 0.00 0.00 0.00 3.18
2973 5135 5.048504 CACACATATCAAGGCAAGTTTGTCT 60.049 40.000 0.00 0.00 46.79 3.41
2974 5136 6.149308 CACACATATCAAGGCAAGTTTGTCTA 59.851 38.462 0.00 0.00 43.42 2.59
2975 5137 6.886459 ACACATATCAAGGCAAGTTTGTCTAT 59.114 34.615 0.00 0.00 43.42 1.98
2976 5138 8.046708 ACACATATCAAGGCAAGTTTGTCTATA 58.953 33.333 0.00 0.00 43.42 1.31
2977 5139 8.554528 CACATATCAAGGCAAGTTTGTCTATAG 58.445 37.037 0.00 0.00 43.42 1.31
2978 5140 7.227512 ACATATCAAGGCAAGTTTGTCTATAGC 59.772 37.037 0.00 0.00 43.42 2.97
2979 5141 4.261801 TCAAGGCAAGTTTGTCTATAGCC 58.738 43.478 0.00 0.00 43.42 3.93
2980 5142 4.019321 TCAAGGCAAGTTTGTCTATAGCCT 60.019 41.667 0.00 0.00 43.42 4.58
2981 5143 5.188948 TCAAGGCAAGTTTGTCTATAGCCTA 59.811 40.000 3.22 0.00 43.42 3.93
2982 5144 5.693769 AGGCAAGTTTGTCTATAGCCTAA 57.306 39.130 0.00 0.00 42.19 2.69
2983 5145 6.253946 AGGCAAGTTTGTCTATAGCCTAAT 57.746 37.500 0.00 0.00 42.19 1.73
2984 5146 7.374975 AGGCAAGTTTGTCTATAGCCTAATA 57.625 36.000 0.00 0.00 42.19 0.98
2985 5147 7.802117 AGGCAAGTTTGTCTATAGCCTAATAA 58.198 34.615 0.00 0.00 42.19 1.40
2986 5148 8.272173 AGGCAAGTTTGTCTATAGCCTAATAAA 58.728 33.333 0.00 0.00 42.19 1.40
2987 5149 9.067986 GGCAAGTTTGTCTATAGCCTAATAAAT 57.932 33.333 0.00 0.00 36.47 1.40
2988 5150 9.884465 GCAAGTTTGTCTATAGCCTAATAAATG 57.116 33.333 0.00 0.00 0.00 2.32
2997 5159 9.273016 TCTATAGCCTAATAAATGAAGTGTTGC 57.727 33.333 0.00 0.00 0.00 4.17
2998 5160 7.880160 ATAGCCTAATAAATGAAGTGTTGCA 57.120 32.000 0.00 0.00 0.00 4.08
2999 5161 6.780457 AGCCTAATAAATGAAGTGTTGCAT 57.220 33.333 0.00 0.00 0.00 3.96
3000 5162 6.567050 AGCCTAATAAATGAAGTGTTGCATG 58.433 36.000 0.00 0.00 0.00 4.06
3001 5163 6.153340 AGCCTAATAAATGAAGTGTTGCATGT 59.847 34.615 0.00 0.00 0.00 3.21
3002 5164 6.813152 GCCTAATAAATGAAGTGTTGCATGTT 59.187 34.615 0.00 0.00 0.00 2.71
3003 5165 7.973388 GCCTAATAAATGAAGTGTTGCATGTTA 59.027 33.333 0.00 0.00 0.00 2.41
3004 5166 9.289303 CCTAATAAATGAAGTGTTGCATGTTAC 57.711 33.333 0.00 0.00 0.00 2.50
3005 5167 9.289303 CTAATAAATGAAGTGTTGCATGTTACC 57.711 33.333 0.00 0.00 0.00 2.85
3006 5168 5.528043 AAATGAAGTGTTGCATGTTACCA 57.472 34.783 0.00 0.00 0.00 3.25
3007 5169 3.980646 TGAAGTGTTGCATGTTACCAC 57.019 42.857 0.00 0.00 0.00 4.16
3008 5170 3.282885 TGAAGTGTTGCATGTTACCACA 58.717 40.909 0.00 0.00 37.31 4.17
3009 5171 3.066064 TGAAGTGTTGCATGTTACCACAC 59.934 43.478 7.36 7.36 35.03 3.82
3010 5172 2.649190 AGTGTTGCATGTTACCACACA 58.351 42.857 15.74 0.00 35.03 3.72
3011 5173 3.221771 AGTGTTGCATGTTACCACACAT 58.778 40.909 15.74 1.51 37.93 3.21
3012 5174 4.393834 AGTGTTGCATGTTACCACACATA 58.606 39.130 15.74 0.00 35.51 2.29
3013 5175 5.009631 AGTGTTGCATGTTACCACACATAT 58.990 37.500 15.74 0.00 35.51 1.78
3014 5176 6.176896 AGTGTTGCATGTTACCACACATATA 58.823 36.000 15.74 0.00 35.51 0.86
3015 5177 6.828273 AGTGTTGCATGTTACCACACATATAT 59.172 34.615 15.74 0.00 35.51 0.86
3016 5178 7.990314 AGTGTTGCATGTTACCACACATATATA 59.010 33.333 15.74 0.00 35.51 0.86
3017 5179 8.282592 GTGTTGCATGTTACCACACATATATAG 58.717 37.037 10.02 0.00 35.51 1.31
3018 5180 8.207545 TGTTGCATGTTACCACACATATATAGA 58.792 33.333 0.00 0.00 35.51 1.98
3019 5181 8.495949 GTTGCATGTTACCACACATATATAGAC 58.504 37.037 0.00 0.00 35.51 2.59
3020 5182 7.731054 TGCATGTTACCACACATATATAGACA 58.269 34.615 0.00 0.00 35.51 3.41
3021 5183 8.207545 TGCATGTTACCACACATATATAGACAA 58.792 33.333 0.00 0.00 35.51 3.18
3022 5184 9.051679 GCATGTTACCACACATATATAGACAAA 57.948 33.333 0.00 0.00 35.51 2.83
3027 5189 7.553881 ACCACACATATATAGACAAACTTGC 57.446 36.000 0.00 0.00 0.00 4.01
3028 5190 6.542370 ACCACACATATATAGACAAACTTGCC 59.458 38.462 0.00 0.00 0.00 4.52
3029 5191 6.767902 CCACACATATATAGACAAACTTGCCT 59.232 38.462 0.00 0.00 0.00 4.75
3030 5192 7.283127 CCACACATATATAGACAAACTTGCCTT 59.717 37.037 0.00 0.00 0.00 4.35
3031 5193 8.124823 CACACATATATAGACAAACTTGCCTTG 58.875 37.037 0.00 0.00 0.00 3.61
3032 5194 8.046708 ACACATATATAGACAAACTTGCCTTGA 58.953 33.333 0.00 0.00 0.00 3.02
3033 5195 9.060347 CACATATATAGACAAACTTGCCTTGAT 57.940 33.333 0.00 0.00 0.00 2.57
3038 5200 5.633830 AGACAAACTTGCCTTGATATGTG 57.366 39.130 0.00 0.00 0.00 3.21
3039 5201 5.072741 AGACAAACTTGCCTTGATATGTGT 58.927 37.500 0.00 0.00 0.00 3.72
3040 5202 5.048504 AGACAAACTTGCCTTGATATGTGTG 60.049 40.000 0.00 0.00 0.00 3.82
3041 5203 4.826733 ACAAACTTGCCTTGATATGTGTGA 59.173 37.500 0.00 0.00 0.00 3.58
3042 5204 5.477984 ACAAACTTGCCTTGATATGTGTGAT 59.522 36.000 0.00 0.00 0.00 3.06
3043 5205 5.571784 AACTTGCCTTGATATGTGTGATG 57.428 39.130 0.00 0.00 0.00 3.07
3044 5206 4.592942 ACTTGCCTTGATATGTGTGATGT 58.407 39.130 0.00 0.00 0.00 3.06
3045 5207 5.012239 ACTTGCCTTGATATGTGTGATGTT 58.988 37.500 0.00 0.00 0.00 2.71
3046 5208 6.179756 ACTTGCCTTGATATGTGTGATGTTA 58.820 36.000 0.00 0.00 0.00 2.41
3047 5209 6.094048 ACTTGCCTTGATATGTGTGATGTTAC 59.906 38.462 0.00 0.00 0.00 2.50
3048 5210 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
3049 5211 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
3050 5212 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
3051 5213 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
3052 5214 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
3053 5215 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
3054 5216 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
3060 5222 8.803397 TGTGTGATGTTACTCATACTACTAGT 57.197 34.615 0.00 0.00 37.92 2.57
3061 5223 9.895138 TGTGTGATGTTACTCATACTACTAGTA 57.105 33.333 1.89 1.89 37.92 1.82
3072 5234 9.439500 ACTCATACTACTAGTAACTAGCTATGC 57.561 37.037 3.76 0.00 37.57 3.14
3073 5235 9.661563 CTCATACTACTAGTAACTAGCTATGCT 57.338 37.037 3.76 0.00 37.57 3.79
3076 5238 9.889128 ATACTACTAGTAACTAGCTATGCTACC 57.111 37.037 3.76 0.00 37.57 3.18
3077 5239 7.743749 ACTACTAGTAACTAGCTATGCTACCA 58.256 38.462 3.76 0.00 40.44 3.25
3078 5240 6.880942 ACTAGTAACTAGCTATGCTACCAC 57.119 41.667 0.00 0.00 40.44 4.16
3079 5241 6.603224 ACTAGTAACTAGCTATGCTACCACT 58.397 40.000 0.00 2.74 40.44 4.00
3080 5242 7.061688 ACTAGTAACTAGCTATGCTACCACTT 58.938 38.462 0.00 0.00 40.44 3.16
3081 5243 6.793505 AGTAACTAGCTATGCTACCACTTT 57.206 37.500 0.00 0.00 40.44 2.66
3082 5244 7.184067 AGTAACTAGCTATGCTACCACTTTT 57.816 36.000 0.00 0.00 40.44 2.27
3083 5245 7.266400 AGTAACTAGCTATGCTACCACTTTTC 58.734 38.462 0.00 0.00 40.44 2.29
3084 5246 5.941555 ACTAGCTATGCTACCACTTTTCT 57.058 39.130 0.00 0.00 40.44 2.52
3085 5247 6.301169 ACTAGCTATGCTACCACTTTTCTT 57.699 37.500 0.00 0.00 40.44 2.52
3086 5248 6.712276 ACTAGCTATGCTACCACTTTTCTTT 58.288 36.000 0.00 0.00 40.44 2.52
3087 5249 6.819146 ACTAGCTATGCTACCACTTTTCTTTC 59.181 38.462 0.00 0.00 40.44 2.62
3088 5250 5.810095 AGCTATGCTACCACTTTTCTTTCT 58.190 37.500 0.00 0.00 36.99 2.52
3089 5251 6.241645 AGCTATGCTACCACTTTTCTTTCTT 58.758 36.000 0.00 0.00 36.99 2.52
3090 5252 6.717084 AGCTATGCTACCACTTTTCTTTCTTT 59.283 34.615 0.00 0.00 36.99 2.52
3091 5253 7.024171 GCTATGCTACCACTTTTCTTTCTTTC 58.976 38.462 0.00 0.00 0.00 2.62
3092 5254 7.094592 GCTATGCTACCACTTTTCTTTCTTTCT 60.095 37.037 0.00 0.00 0.00 2.52
3093 5255 7.588497 ATGCTACCACTTTTCTTTCTTTCTT 57.412 32.000 0.00 0.00 0.00 2.52
3094 5256 7.027778 TGCTACCACTTTTCTTTCTTTCTTC 57.972 36.000 0.00 0.00 0.00 2.87
3095 5257 6.601613 TGCTACCACTTTTCTTTCTTTCTTCA 59.398 34.615 0.00 0.00 0.00 3.02
3096 5258 7.285401 TGCTACCACTTTTCTTTCTTTCTTCAT 59.715 33.333 0.00 0.00 0.00 2.57
3097 5259 8.138074 GCTACCACTTTTCTTTCTTTCTTCATT 58.862 33.333 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.471041 TCCATATAACTCTAGCTACTGGACAT 58.529 38.462 0.00 0.00 0.00 3.06
178 179 7.719633 TGCTAAACCAAAAGTGTAGAATCTCTT 59.280 33.333 0.00 0.00 38.43 2.85
205 206 1.146930 ACATAGCCCAGCACATCGG 59.853 57.895 0.00 0.00 0.00 4.18
365 369 2.401766 GGCGTTGGTCCTCAGCATG 61.402 63.158 0.00 0.00 37.54 4.06
478 482 4.107473 ACAGGGGGTAGATATGTAGCACTA 59.893 45.833 10.76 0.00 0.00 2.74
479 483 3.116707 ACAGGGGGTAGATATGTAGCACT 60.117 47.826 10.76 5.70 0.00 4.40
526 532 0.738389 AGACCAACACAGTTTTGCGG 59.262 50.000 0.00 0.00 0.00 5.69
554 560 0.593128 GCCAAAACACATCTCACGCT 59.407 50.000 0.00 0.00 0.00 5.07
607 615 6.756299 ACTACTTAAGGACTCTAGGAAACG 57.244 41.667 7.53 0.00 0.00 3.60
664 672 1.000396 GAGCAGCTTTCCATGGGGT 60.000 57.895 13.02 0.00 34.93 4.95
776 784 7.898014 ACCCCTTTCCATTACTTTCATAATC 57.102 36.000 0.00 0.00 0.00 1.75
777 785 9.951866 ATAACCCCTTTCCATTACTTTCATAAT 57.048 29.630 0.00 0.00 0.00 1.28
820 834 0.471211 CCCCAGCGGACTCCCTAATA 60.471 60.000 0.00 0.00 0.00 0.98
821 835 1.766461 CCCCAGCGGACTCCCTAAT 60.766 63.158 0.00 0.00 0.00 1.73
832 846 4.787280 AGACCTCCTCCCCCAGCG 62.787 72.222 0.00 0.00 0.00 5.18
840 854 2.815298 CGCGACTCGAGACCTCCTC 61.815 68.421 21.68 3.71 41.67 3.71
893 907 2.563086 ATGCAGCTAAAACGCGCGAC 62.563 55.000 39.36 17.27 34.04 5.19
928 942 1.609072 GAATTGGCGCTCCTATTTCCC 59.391 52.381 7.64 0.00 37.81 3.97
977 996 3.895025 GCAATCTCGCTGCCAAGA 58.105 55.556 2.34 2.34 33.51 3.02
1036 1055 0.316204 TCCGGACGAGGTTCTTGTTC 59.684 55.000 0.00 0.00 0.00 3.18
1495 1514 1.342819 CGGAGCATAAGAAGAGGGAGG 59.657 57.143 0.00 0.00 0.00 4.30
1496 1515 2.035321 GTCGGAGCATAAGAAGAGGGAG 59.965 54.545 0.00 0.00 0.00 4.30
1497 1516 2.032620 GTCGGAGCATAAGAAGAGGGA 58.967 52.381 0.00 0.00 0.00 4.20
1498 1517 1.269309 CGTCGGAGCATAAGAAGAGGG 60.269 57.143 0.00 0.00 0.00 4.30
1499 1518 1.405821 ACGTCGGAGCATAAGAAGAGG 59.594 52.381 0.00 0.00 0.00 3.69
1500 1519 2.541999 GGACGTCGGAGCATAAGAAGAG 60.542 54.545 9.92 0.00 0.00 2.85
1501 1520 1.404391 GGACGTCGGAGCATAAGAAGA 59.596 52.381 9.92 0.00 0.00 2.87
1502 1521 1.536284 GGGACGTCGGAGCATAAGAAG 60.536 57.143 9.92 0.00 0.00 2.85
1503 1522 0.458669 GGGACGTCGGAGCATAAGAA 59.541 55.000 9.92 0.00 0.00 2.52
1504 1523 1.389609 GGGGACGTCGGAGCATAAGA 61.390 60.000 9.92 0.00 0.00 2.10
1505 1524 1.067582 GGGGACGTCGGAGCATAAG 59.932 63.158 9.92 0.00 0.00 1.73
1506 1525 0.974010 AAGGGGACGTCGGAGCATAA 60.974 55.000 9.92 0.00 0.00 1.90
1507 1526 0.974010 AAAGGGGACGTCGGAGCATA 60.974 55.000 9.92 0.00 0.00 3.14
1508 1527 2.240162 GAAAGGGGACGTCGGAGCAT 62.240 60.000 9.92 0.00 0.00 3.79
1509 1528 2.920912 AAAGGGGACGTCGGAGCA 60.921 61.111 9.92 0.00 0.00 4.26
1510 1529 2.125633 GAAAGGGGACGTCGGAGC 60.126 66.667 9.92 0.00 0.00 4.70
1511 1530 2.577593 GGAAAGGGGACGTCGGAG 59.422 66.667 9.92 0.00 0.00 4.63
1512 1531 2.999063 GGGAAAGGGGACGTCGGA 60.999 66.667 9.92 0.00 0.00 4.55
1513 1532 4.091939 GGGGAAAGGGGACGTCGG 62.092 72.222 9.92 0.00 0.00 4.79
1514 1533 3.001406 AGGGGAAAGGGGACGTCG 61.001 66.667 9.92 0.00 0.00 5.12
1515 1534 2.667108 GGAGGGGAAAGGGGACGTC 61.667 68.421 7.13 7.13 0.00 4.34
1516 1535 2.609921 GGAGGGGAAAGGGGACGT 60.610 66.667 0.00 0.00 0.00 4.34
1517 1536 3.782443 CGGAGGGGAAAGGGGACG 61.782 72.222 0.00 0.00 0.00 4.79
1518 1537 4.111053 GCGGAGGGGAAAGGGGAC 62.111 72.222 0.00 0.00 0.00 4.46
1850 3829 2.758089 CCCCTCCACTACGTCGACG 61.758 68.421 34.58 34.58 46.33 5.12
2124 4103 2.808543 GTTCTCTCGTGGCAAAAGATGT 59.191 45.455 0.00 0.00 0.00 3.06
2261 4240 6.656693 CGCATCCCCAAAAAGATCTATAAGAT 59.343 38.462 0.00 0.00 37.73 2.40
2315 4295 7.707035 CGCCTTGAGATTTCATAACTAACTACT 59.293 37.037 0.00 0.00 32.27 2.57
2334 4314 4.367450 CAAGAAATTTTTGTCCGCCTTGA 58.633 39.130 6.26 0.00 33.60 3.02
2471 4454 6.693315 TGCAAAGTATTTAGGGCAATAGAC 57.307 37.500 0.00 0.00 35.03 2.59
2481 4464 8.692110 TTGATTCAGCAATGCAAAGTATTTAG 57.308 30.769 8.35 0.00 35.03 1.85
2507 4490 5.998363 ACAGGAGTATTGAAGTTGAAGGTTC 59.002 40.000 0.00 0.00 0.00 3.62
2518 4501 3.788227 AGGTTGCACAGGAGTATTGAA 57.212 42.857 0.00 0.00 0.00 2.69
2646 4808 6.428385 AATTTGAAGCTAGATGTACACTGC 57.572 37.500 0.00 0.14 0.00 4.40
2647 4809 8.292448 ACAAAATTTGAAGCTAGATGTACACTG 58.708 33.333 13.19 0.00 0.00 3.66
2648 4810 8.396272 ACAAAATTTGAAGCTAGATGTACACT 57.604 30.769 13.19 0.13 0.00 3.55
2649 4811 7.750903 GGACAAAATTTGAAGCTAGATGTACAC 59.249 37.037 13.19 0.00 0.00 2.90
2650 4812 7.446931 TGGACAAAATTTGAAGCTAGATGTACA 59.553 33.333 13.19 0.00 0.00 2.90
2651 4813 7.816640 TGGACAAAATTTGAAGCTAGATGTAC 58.183 34.615 13.19 0.00 0.00 2.90
2652 4814 7.994425 TGGACAAAATTTGAAGCTAGATGTA 57.006 32.000 13.19 0.00 0.00 2.29
2653 4815 6.899393 TGGACAAAATTTGAAGCTAGATGT 57.101 33.333 13.19 0.00 0.00 3.06
2654 4816 9.859427 TTTATGGACAAAATTTGAAGCTAGATG 57.141 29.630 13.19 0.00 0.00 2.90
2656 4818 9.912634 CTTTTATGGACAAAATTTGAAGCTAGA 57.087 29.630 13.19 0.00 0.00 2.43
2657 4819 9.912634 TCTTTTATGGACAAAATTTGAAGCTAG 57.087 29.630 13.19 0.00 0.00 3.42
2658 4820 9.912634 CTCTTTTATGGACAAAATTTGAAGCTA 57.087 29.630 13.19 0.19 0.00 3.32
2659 4821 8.424133 ACTCTTTTATGGACAAAATTTGAAGCT 58.576 29.630 13.19 0.00 0.00 3.74
2660 4822 8.490355 CACTCTTTTATGGACAAAATTTGAAGC 58.510 33.333 13.19 1.53 0.00 3.86
2661 4823 9.533253 ACACTCTTTTATGGACAAAATTTGAAG 57.467 29.630 13.19 3.99 0.00 3.02
2663 4825 9.959749 GTACACTCTTTTATGGACAAAATTTGA 57.040 29.630 13.19 0.00 29.34 2.69
2664 4826 9.965824 AGTACACTCTTTTATGGACAAAATTTG 57.034 29.630 3.89 3.89 31.50 2.32
2667 4829 9.574516 AGAAGTACACTCTTTTATGGACAAAAT 57.425 29.630 0.00 0.00 31.50 1.82
2668 4830 8.974060 AGAAGTACACTCTTTTATGGACAAAA 57.026 30.769 0.00 0.00 31.50 2.44
2670 4832 9.871238 GATAGAAGTACACTCTTTTATGGACAA 57.129 33.333 3.13 0.00 31.50 3.18
2671 4833 9.256228 AGATAGAAGTACACTCTTTTATGGACA 57.744 33.333 3.13 0.00 31.50 4.02
2679 4841 9.442047 CATTGGAAAGATAGAAGTACACTCTTT 57.558 33.333 3.13 5.62 38.50 2.52
2680 4842 7.550906 GCATTGGAAAGATAGAAGTACACTCTT 59.449 37.037 3.13 0.00 0.00 2.85
2681 4843 7.044798 GCATTGGAAAGATAGAAGTACACTCT 58.955 38.462 0.00 0.00 0.00 3.24
2682 4844 6.818644 TGCATTGGAAAGATAGAAGTACACTC 59.181 38.462 0.00 0.00 0.00 3.51
2683 4845 6.711277 TGCATTGGAAAGATAGAAGTACACT 58.289 36.000 0.00 0.00 0.00 3.55
2684 4846 6.985188 TGCATTGGAAAGATAGAAGTACAC 57.015 37.500 0.00 0.00 0.00 2.90
2685 4847 8.579850 AAATGCATTGGAAAGATAGAAGTACA 57.420 30.769 13.82 0.00 0.00 2.90
2691 4853 9.859427 CACTTTAAAATGCATTGGAAAGATAGA 57.141 29.630 32.62 10.94 31.70 1.98
2692 4854 9.090692 CCACTTTAAAATGCATTGGAAAGATAG 57.909 33.333 32.62 24.79 31.70 2.08
2693 4855 8.040132 CCCACTTTAAAATGCATTGGAAAGATA 58.960 33.333 32.62 11.70 31.70 1.98
2694 4856 6.880529 CCCACTTTAAAATGCATTGGAAAGAT 59.119 34.615 32.62 21.82 31.70 2.40
2695 4857 6.042552 TCCCACTTTAAAATGCATTGGAAAGA 59.957 34.615 32.62 18.96 31.70 2.52
2696 4858 6.229733 TCCCACTTTAAAATGCATTGGAAAG 58.770 36.000 28.26 28.26 32.66 2.62
2697 4859 6.179906 TCCCACTTTAAAATGCATTGGAAA 57.820 33.333 13.82 14.47 0.00 3.13
2698 4860 5.815233 TCCCACTTTAAAATGCATTGGAA 57.185 34.783 13.82 7.42 0.00 3.53
2699 4861 5.815233 TTCCCACTTTAAAATGCATTGGA 57.185 34.783 13.82 9.64 0.00 3.53
2700 4862 6.874288 TTTTCCCACTTTAAAATGCATTGG 57.126 33.333 13.82 8.55 0.00 3.16
2721 4883 5.643777 CGTGTGATGGGAGAGAAGTATTTTT 59.356 40.000 0.00 0.00 0.00 1.94
2722 4884 5.178797 CGTGTGATGGGAGAGAAGTATTTT 58.821 41.667 0.00 0.00 0.00 1.82
2723 4885 4.383118 CCGTGTGATGGGAGAGAAGTATTT 60.383 45.833 0.00 0.00 0.00 1.40
2724 4886 3.133003 CCGTGTGATGGGAGAGAAGTATT 59.867 47.826 0.00 0.00 0.00 1.89
2725 4887 2.695666 CCGTGTGATGGGAGAGAAGTAT 59.304 50.000 0.00 0.00 0.00 2.12
2726 4888 2.100197 CCGTGTGATGGGAGAGAAGTA 58.900 52.381 0.00 0.00 0.00 2.24
2727 4889 0.898320 CCGTGTGATGGGAGAGAAGT 59.102 55.000 0.00 0.00 0.00 3.01
2728 4890 0.898320 ACCGTGTGATGGGAGAGAAG 59.102 55.000 0.00 0.00 0.00 2.85
2729 4891 2.225382 TACCGTGTGATGGGAGAGAA 57.775 50.000 0.00 0.00 0.00 2.87
2730 4892 1.822990 GTTACCGTGTGATGGGAGAGA 59.177 52.381 0.00 0.00 0.00 3.10
2731 4893 1.134788 GGTTACCGTGTGATGGGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
2732 4894 0.899720 GGTTACCGTGTGATGGGAGA 59.100 55.000 0.00 0.00 0.00 3.71
2733 4895 0.611200 TGGTTACCGTGTGATGGGAG 59.389 55.000 0.00 0.00 0.00 4.30
2734 4896 1.002659 CTTGGTTACCGTGTGATGGGA 59.997 52.381 0.00 0.00 0.00 4.37
2735 4897 1.002659 TCTTGGTTACCGTGTGATGGG 59.997 52.381 0.00 0.00 0.00 4.00
2736 4898 2.289444 ACTCTTGGTTACCGTGTGATGG 60.289 50.000 0.00 0.00 0.00 3.51
2737 4899 2.993899 GACTCTTGGTTACCGTGTGATG 59.006 50.000 0.00 0.00 0.00 3.07
2738 4900 2.028385 GGACTCTTGGTTACCGTGTGAT 60.028 50.000 0.00 0.00 0.00 3.06
2739 4901 1.342174 GGACTCTTGGTTACCGTGTGA 59.658 52.381 0.00 0.00 0.00 3.58
2740 4902 1.069513 TGGACTCTTGGTTACCGTGTG 59.930 52.381 0.00 0.00 0.00 3.82
2741 4903 1.416243 TGGACTCTTGGTTACCGTGT 58.584 50.000 0.00 0.00 0.00 4.49
2742 4904 2.036733 TCTTGGACTCTTGGTTACCGTG 59.963 50.000 0.00 0.00 0.00 4.94
2743 4905 2.036862 GTCTTGGACTCTTGGTTACCGT 59.963 50.000 0.00 0.00 0.00 4.83
2744 4906 2.612221 GGTCTTGGACTCTTGGTTACCG 60.612 54.545 0.00 0.00 32.47 4.02
2745 4907 2.370849 TGGTCTTGGACTCTTGGTTACC 59.629 50.000 0.00 0.00 32.47 2.85
2746 4908 3.764237 TGGTCTTGGACTCTTGGTTAC 57.236 47.619 0.00 0.00 32.47 2.50
2747 4909 4.993705 ATTGGTCTTGGACTCTTGGTTA 57.006 40.909 0.00 0.00 32.47 2.85
2748 4910 3.884037 ATTGGTCTTGGACTCTTGGTT 57.116 42.857 0.00 0.00 32.47 3.67
2749 4911 3.307762 GCTATTGGTCTTGGACTCTTGGT 60.308 47.826 0.00 0.00 32.47 3.67
2750 4912 3.274288 GCTATTGGTCTTGGACTCTTGG 58.726 50.000 0.00 0.00 32.47 3.61
2751 4913 3.942829 TGCTATTGGTCTTGGACTCTTG 58.057 45.455 0.00 0.00 32.47 3.02
2752 4914 4.640771 TTGCTATTGGTCTTGGACTCTT 57.359 40.909 0.00 0.00 32.47 2.85
2753 4915 4.472833 AGATTGCTATTGGTCTTGGACTCT 59.527 41.667 0.00 0.00 32.47 3.24
2754 4916 4.775236 AGATTGCTATTGGTCTTGGACTC 58.225 43.478 0.00 0.00 32.47 3.36
2755 4917 4.851639 AGATTGCTATTGGTCTTGGACT 57.148 40.909 0.00 0.00 32.47 3.85
2756 4918 5.675538 AGTAGATTGCTATTGGTCTTGGAC 58.324 41.667 0.00 0.00 0.00 4.02
2757 4919 5.957771 AGTAGATTGCTATTGGTCTTGGA 57.042 39.130 0.00 0.00 0.00 3.53
2758 4920 6.821388 ACTAGTAGATTGCTATTGGTCTTGG 58.179 40.000 3.59 0.00 0.00 3.61
2759 4921 8.414003 TGTACTAGTAGATTGCTATTGGTCTTG 58.586 37.037 1.87 0.00 31.97 3.02
2760 4922 8.534954 TGTACTAGTAGATTGCTATTGGTCTT 57.465 34.615 1.87 0.00 31.97 3.01
2761 4923 8.534954 TTGTACTAGTAGATTGCTATTGGTCT 57.465 34.615 1.87 0.00 31.97 3.85
2762 4924 9.765795 ATTTGTACTAGTAGATTGCTATTGGTC 57.234 33.333 1.87 0.00 31.97 4.02
2763 4925 9.547753 CATTTGTACTAGTAGATTGCTATTGGT 57.452 33.333 1.87 0.00 33.66 3.67
2764 4926 8.993121 CCATTTGTACTAGTAGATTGCTATTGG 58.007 37.037 1.87 0.00 0.00 3.16
2765 4927 9.547753 ACCATTTGTACTAGTAGATTGCTATTG 57.452 33.333 1.87 0.00 0.00 1.90
2766 4928 9.765795 GACCATTTGTACTAGTAGATTGCTATT 57.234 33.333 1.87 0.00 0.00 1.73
2767 4929 9.148879 AGACCATTTGTACTAGTAGATTGCTAT 57.851 33.333 1.87 0.00 0.00 2.97
2768 4930 8.534954 AGACCATTTGTACTAGTAGATTGCTA 57.465 34.615 1.87 0.00 0.00 3.49
2769 4931 7.425224 AGACCATTTGTACTAGTAGATTGCT 57.575 36.000 1.87 0.00 0.00 3.91
2770 4932 7.982354 AGAAGACCATTTGTACTAGTAGATTGC 59.018 37.037 1.87 0.00 0.00 3.56
2771 4933 9.877178 AAGAAGACCATTTGTACTAGTAGATTG 57.123 33.333 1.87 3.50 0.00 2.67
2787 4949 9.533831 AGTGGATGTAAAAATTAAGAAGACCAT 57.466 29.630 0.00 0.00 0.00 3.55
2788 4950 8.934023 AGTGGATGTAAAAATTAAGAAGACCA 57.066 30.769 0.00 0.00 0.00 4.02
2799 4961 9.654663 GTGAGTAGTCTAAGTGGATGTAAAAAT 57.345 33.333 0.00 0.00 0.00 1.82
2800 4962 8.644216 TGTGAGTAGTCTAAGTGGATGTAAAAA 58.356 33.333 0.00 0.00 0.00 1.94
2801 4963 8.185506 TGTGAGTAGTCTAAGTGGATGTAAAA 57.814 34.615 0.00 0.00 0.00 1.52
2802 4964 7.770366 TGTGAGTAGTCTAAGTGGATGTAAA 57.230 36.000 0.00 0.00 0.00 2.01
2803 4965 7.770366 TTGTGAGTAGTCTAAGTGGATGTAA 57.230 36.000 0.00 0.00 0.00 2.41
2804 4966 7.147897 CCATTGTGAGTAGTCTAAGTGGATGTA 60.148 40.741 8.14 0.00 0.00 2.29
2805 4967 6.351371 CCATTGTGAGTAGTCTAAGTGGATGT 60.351 42.308 8.14 0.00 0.00 3.06
2806 4968 6.045318 CCATTGTGAGTAGTCTAAGTGGATG 58.955 44.000 8.14 0.00 0.00 3.51
2807 4969 5.129485 CCCATTGTGAGTAGTCTAAGTGGAT 59.871 44.000 12.95 0.00 0.00 3.41
2808 4970 4.466370 CCCATTGTGAGTAGTCTAAGTGGA 59.534 45.833 12.95 0.00 0.00 4.02
2809 4971 4.466370 TCCCATTGTGAGTAGTCTAAGTGG 59.534 45.833 0.00 3.85 0.00 4.00
2810 4972 5.186021 ACTCCCATTGTGAGTAGTCTAAGTG 59.814 44.000 0.00 0.00 41.17 3.16
2811 4973 5.334421 ACTCCCATTGTGAGTAGTCTAAGT 58.666 41.667 0.00 0.00 41.17 2.24
2812 4974 5.923733 ACTCCCATTGTGAGTAGTCTAAG 57.076 43.478 0.00 0.00 41.17 2.18
2813 4975 6.722590 TGTTACTCCCATTGTGAGTAGTCTAA 59.277 38.462 8.66 0.00 43.94 2.10
2814 4976 6.250711 TGTTACTCCCATTGTGAGTAGTCTA 58.749 40.000 8.66 0.00 43.94 2.59
2815 4977 5.084519 TGTTACTCCCATTGTGAGTAGTCT 58.915 41.667 8.66 0.00 43.94 3.24
2816 4978 5.401531 TGTTACTCCCATTGTGAGTAGTC 57.598 43.478 8.66 7.49 43.94 2.59
2817 4979 6.098409 CCTATGTTACTCCCATTGTGAGTAGT 59.902 42.308 8.66 3.73 43.94 2.73
2818 4980 6.098409 ACCTATGTTACTCCCATTGTGAGTAG 59.902 42.308 8.66 0.47 43.94 2.57
2819 4981 5.962031 ACCTATGTTACTCCCATTGTGAGTA 59.038 40.000 5.06 5.06 42.78 2.59
2820 4982 4.783227 ACCTATGTTACTCCCATTGTGAGT 59.217 41.667 6.99 6.99 44.85 3.41
2821 4983 5.359194 ACCTATGTTACTCCCATTGTGAG 57.641 43.478 0.00 0.00 35.92 3.51
2822 4984 5.962031 ACTACCTATGTTACTCCCATTGTGA 59.038 40.000 0.00 0.00 0.00 3.58
2823 4985 6.235231 ACTACCTATGTTACTCCCATTGTG 57.765 41.667 0.00 0.00 0.00 3.33
2824 4986 7.400915 TGTTACTACCTATGTTACTCCCATTGT 59.599 37.037 0.00 0.00 0.00 2.71
2825 4987 7.788026 TGTTACTACCTATGTTACTCCCATTG 58.212 38.462 0.00 0.00 0.00 2.82
2826 4988 7.983166 TGTTACTACCTATGTTACTCCCATT 57.017 36.000 0.00 0.00 0.00 3.16
2827 4989 7.787904 TGATGTTACTACCTATGTTACTCCCAT 59.212 37.037 0.00 0.00 0.00 4.00
2828 4990 7.069085 GTGATGTTACTACCTATGTTACTCCCA 59.931 40.741 0.00 0.00 0.00 4.37
2829 4991 7.069085 TGTGATGTTACTACCTATGTTACTCCC 59.931 40.741 0.00 0.00 0.00 4.30
2830 4992 7.919621 GTGTGATGTTACTACCTATGTTACTCC 59.080 40.741 0.00 0.00 0.00 3.85
2831 4993 8.464404 TGTGTGATGTTACTACCTATGTTACTC 58.536 37.037 0.00 0.00 0.00 2.59
2832 4994 8.357290 TGTGTGATGTTACTACCTATGTTACT 57.643 34.615 0.00 0.00 0.00 2.24
2835 4997 9.982651 GATATGTGTGATGTTACTACCTATGTT 57.017 33.333 0.00 0.00 0.00 2.71
2836 4998 9.143155 TGATATGTGTGATGTTACTACCTATGT 57.857 33.333 0.00 0.00 0.00 2.29
2837 4999 9.981114 TTGATATGTGTGATGTTACTACCTATG 57.019 33.333 0.00 0.00 0.00 2.23
2839 5001 9.416284 TCTTGATATGTGTGATGTTACTACCTA 57.584 33.333 0.00 0.00 0.00 3.08
2840 5002 8.306313 TCTTGATATGTGTGATGTTACTACCT 57.694 34.615 0.00 0.00 0.00 3.08
2860 5022 9.716531 CTTGCCATATCATCTACTTTATCTTGA 57.283 33.333 0.00 0.00 0.00 3.02
2861 5023 8.449397 GCTTGCCATATCATCTACTTTATCTTG 58.551 37.037 0.00 0.00 0.00 3.02
2862 5024 8.159447 TGCTTGCCATATCATCTACTTTATCTT 58.841 33.333 0.00 0.00 0.00 2.40
2863 5025 7.683578 TGCTTGCCATATCATCTACTTTATCT 58.316 34.615 0.00 0.00 0.00 1.98
2864 5026 7.912056 TGCTTGCCATATCATCTACTTTATC 57.088 36.000 0.00 0.00 0.00 1.75
2865 5027 8.874744 ATTGCTTGCCATATCATCTACTTTAT 57.125 30.769 0.00 0.00 0.00 1.40
2866 5028 9.791801 TTATTGCTTGCCATATCATCTACTTTA 57.208 29.630 0.00 0.00 0.00 1.85
2867 5029 8.696043 TTATTGCTTGCCATATCATCTACTTT 57.304 30.769 0.00 0.00 0.00 2.66
2868 5030 8.696043 TTTATTGCTTGCCATATCATCTACTT 57.304 30.769 0.00 0.00 0.00 2.24
2869 5031 8.737175 CATTTATTGCTTGCCATATCATCTACT 58.263 33.333 0.00 0.00 0.00 2.57
2870 5032 8.733458 TCATTTATTGCTTGCCATATCATCTAC 58.267 33.333 0.00 0.00 0.00 2.59
2871 5033 8.866970 TCATTTATTGCTTGCCATATCATCTA 57.133 30.769 0.00 0.00 0.00 1.98
2872 5034 7.770366 TCATTTATTGCTTGCCATATCATCT 57.230 32.000 0.00 0.00 0.00 2.90
2873 5035 8.301720 TCTTCATTTATTGCTTGCCATATCATC 58.698 33.333 0.00 0.00 0.00 2.92
2874 5036 8.185506 TCTTCATTTATTGCTTGCCATATCAT 57.814 30.769 0.00 0.00 0.00 2.45
2875 5037 7.585579 TCTTCATTTATTGCTTGCCATATCA 57.414 32.000 0.00 0.00 0.00 2.15
2876 5038 8.876275 TTTCTTCATTTATTGCTTGCCATATC 57.124 30.769 0.00 0.00 0.00 1.63
2877 5039 8.698210 TCTTTCTTCATTTATTGCTTGCCATAT 58.302 29.630 0.00 0.00 0.00 1.78
2878 5040 8.065473 TCTTTCTTCATTTATTGCTTGCCATA 57.935 30.769 0.00 0.00 0.00 2.74
2879 5041 6.938507 TCTTTCTTCATTTATTGCTTGCCAT 58.061 32.000 0.00 0.00 0.00 4.40
2880 5042 6.209192 TCTCTTTCTTCATTTATTGCTTGCCA 59.791 34.615 0.00 0.00 0.00 4.92
2881 5043 6.624423 TCTCTTTCTTCATTTATTGCTTGCC 58.376 36.000 0.00 0.00 0.00 4.52
2882 5044 6.750963 CCTCTCTTTCTTCATTTATTGCTTGC 59.249 38.462 0.00 0.00 0.00 4.01
2883 5045 8.048534 TCCTCTCTTTCTTCATTTATTGCTTG 57.951 34.615 0.00 0.00 0.00 4.01
2884 5046 8.641498 TTCCTCTCTTTCTTCATTTATTGCTT 57.359 30.769 0.00 0.00 0.00 3.91
2885 5047 8.641498 TTTCCTCTCTTTCTTCATTTATTGCT 57.359 30.769 0.00 0.00 0.00 3.91
2886 5048 8.518702 ACTTTCCTCTCTTTCTTCATTTATTGC 58.481 33.333 0.00 0.00 0.00 3.56
2887 5049 9.837525 CACTTTCCTCTCTTTCTTCATTTATTG 57.162 33.333 0.00 0.00 0.00 1.90
2888 5050 9.018582 CCACTTTCCTCTCTTTCTTCATTTATT 57.981 33.333 0.00 0.00 0.00 1.40
2889 5051 8.166726 ACCACTTTCCTCTCTTTCTTCATTTAT 58.833 33.333 0.00 0.00 0.00 1.40
2890 5052 7.518188 ACCACTTTCCTCTCTTTCTTCATTTA 58.482 34.615 0.00 0.00 0.00 1.40
2891 5053 6.368805 ACCACTTTCCTCTCTTTCTTCATTT 58.631 36.000 0.00 0.00 0.00 2.32
2892 5054 5.946486 ACCACTTTCCTCTCTTTCTTCATT 58.054 37.500 0.00 0.00 0.00 2.57
2893 5055 5.574970 ACCACTTTCCTCTCTTTCTTCAT 57.425 39.130 0.00 0.00 0.00 2.57
2894 5056 6.126883 TGTTACCACTTTCCTCTCTTTCTTCA 60.127 38.462 0.00 0.00 0.00 3.02
2895 5057 6.289064 TGTTACCACTTTCCTCTCTTTCTTC 58.711 40.000 0.00 0.00 0.00 2.87
2896 5058 6.248569 TGTTACCACTTTCCTCTCTTTCTT 57.751 37.500 0.00 0.00 0.00 2.52
2897 5059 5.888982 TGTTACCACTTTCCTCTCTTTCT 57.111 39.130 0.00 0.00 0.00 2.52
2898 5060 6.314152 GCTATGTTACCACTTTCCTCTCTTTC 59.686 42.308 0.00 0.00 0.00 2.62
2899 5061 6.013293 AGCTATGTTACCACTTTCCTCTCTTT 60.013 38.462 0.00 0.00 0.00 2.52
2900 5062 5.485708 AGCTATGTTACCACTTTCCTCTCTT 59.514 40.000 0.00 0.00 0.00 2.85
2901 5063 5.026790 AGCTATGTTACCACTTTCCTCTCT 58.973 41.667 0.00 0.00 0.00 3.10
2902 5064 5.346181 AGCTATGTTACCACTTTCCTCTC 57.654 43.478 0.00 0.00 0.00 3.20
2903 5065 5.958987 ACTAGCTATGTTACCACTTTCCTCT 59.041 40.000 0.00 0.00 0.00 3.69
2904 5066 6.223351 ACTAGCTATGTTACCACTTTCCTC 57.777 41.667 0.00 0.00 0.00 3.71
2905 5067 6.622427 AACTAGCTATGTTACCACTTTCCT 57.378 37.500 0.00 0.00 0.00 3.36
2906 5068 7.554211 AGTAACTAGCTATGTTACCACTTTCC 58.446 38.462 25.92 11.54 46.31 3.13
2907 5069 9.733219 CTAGTAACTAGCTATGTTACCACTTTC 57.267 37.037 25.92 11.98 46.31 2.62
2908 5070 9.252635 ACTAGTAACTAGCTATGTTACCACTTT 57.747 33.333 25.92 17.22 46.31 2.66
2909 5071 8.820153 ACTAGTAACTAGCTATGTTACCACTT 57.180 34.615 25.92 17.43 46.31 3.16
2910 5072 9.558396 CTACTAGTAACTAGCTATGTTACCACT 57.442 37.037 25.92 18.79 46.31 4.00
2911 5073 9.336171 ACTACTAGTAACTAGCTATGTTACCAC 57.664 37.037 25.92 14.94 46.31 4.16
2928 5090 9.895138 TGTGTGATGTTACTCATACTACTAGTA 57.105 33.333 1.89 1.89 37.92 1.82
2929 5091 8.803397 TGTGTGATGTTACTCATACTACTAGT 57.197 34.615 0.00 0.00 37.92 2.57
2935 5097 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
2936 5098 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
2937 5099 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
2938 5100 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
2939 5101 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
2940 5102 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
2941 5103 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
2942 5104 6.094048 ACTTGCCTTGATATGTGTGATGTTAC 59.906 38.462 0.00 0.00 0.00 2.50
2943 5105 6.179756 ACTTGCCTTGATATGTGTGATGTTA 58.820 36.000 0.00 0.00 0.00 2.41
2944 5106 5.012239 ACTTGCCTTGATATGTGTGATGTT 58.988 37.500 0.00 0.00 0.00 2.71
2945 5107 4.592942 ACTTGCCTTGATATGTGTGATGT 58.407 39.130 0.00 0.00 0.00 3.06
2946 5108 5.571784 AACTTGCCTTGATATGTGTGATG 57.428 39.130 0.00 0.00 0.00 3.07
2947 5109 5.477984 ACAAACTTGCCTTGATATGTGTGAT 59.522 36.000 0.00 0.00 0.00 3.06
2948 5110 4.826733 ACAAACTTGCCTTGATATGTGTGA 59.173 37.500 0.00 0.00 0.00 3.58
2949 5111 5.048504 AGACAAACTTGCCTTGATATGTGTG 60.049 40.000 0.00 0.00 0.00 3.82
2950 5112 5.072741 AGACAAACTTGCCTTGATATGTGT 58.927 37.500 0.00 0.00 0.00 3.72
2951 5113 5.633830 AGACAAACTTGCCTTGATATGTG 57.366 39.130 0.00 0.00 0.00 3.21
2952 5114 7.227512 GCTATAGACAAACTTGCCTTGATATGT 59.772 37.037 3.21 0.00 0.00 2.29
2953 5115 7.308229 GGCTATAGACAAACTTGCCTTGATATG 60.308 40.741 3.21 0.00 36.30 1.78
2954 5116 6.712547 GGCTATAGACAAACTTGCCTTGATAT 59.287 38.462 3.21 0.00 36.30 1.63
2955 5117 6.055588 GGCTATAGACAAACTTGCCTTGATA 58.944 40.000 3.21 0.00 36.30 2.15
2956 5118 4.884164 GGCTATAGACAAACTTGCCTTGAT 59.116 41.667 3.21 0.00 36.30 2.57
2957 5119 4.019321 AGGCTATAGACAAACTTGCCTTGA 60.019 41.667 8.68 0.00 41.76 3.02
2958 5120 4.265073 AGGCTATAGACAAACTTGCCTTG 58.735 43.478 8.68 0.00 41.76 3.61
2959 5121 4.576330 AGGCTATAGACAAACTTGCCTT 57.424 40.909 8.68 0.00 41.76 4.35
2960 5122 5.693769 TTAGGCTATAGACAAACTTGCCT 57.306 39.130 8.68 5.02 44.26 4.75
2961 5123 8.446599 TTTATTAGGCTATAGACAAACTTGCC 57.553 34.615 8.68 0.00 37.99 4.52
2962 5124 9.884465 CATTTATTAGGCTATAGACAAACTTGC 57.116 33.333 8.68 0.00 0.00 4.01
2971 5133 9.273016 GCAACACTTCATTTATTAGGCTATAGA 57.727 33.333 3.21 0.00 0.00 1.98
2972 5134 9.056005 TGCAACACTTCATTTATTAGGCTATAG 57.944 33.333 0.00 0.00 0.00 1.31
2973 5135 8.972458 TGCAACACTTCATTTATTAGGCTATA 57.028 30.769 0.00 0.00 0.00 1.31
2974 5136 7.880160 TGCAACACTTCATTTATTAGGCTAT 57.120 32.000 0.00 0.00 0.00 2.97
2975 5137 7.339212 ACATGCAACACTTCATTTATTAGGCTA 59.661 33.333 0.00 0.00 0.00 3.93
2976 5138 6.153340 ACATGCAACACTTCATTTATTAGGCT 59.847 34.615 0.00 0.00 0.00 4.58
2977 5139 6.332630 ACATGCAACACTTCATTTATTAGGC 58.667 36.000 0.00 0.00 0.00 3.93
2978 5140 9.289303 GTAACATGCAACACTTCATTTATTAGG 57.711 33.333 0.00 0.00 0.00 2.69
2979 5141 9.289303 GGTAACATGCAACACTTCATTTATTAG 57.711 33.333 0.00 0.00 0.00 1.73
2980 5142 8.797438 TGGTAACATGCAACACTTCATTTATTA 58.203 29.630 0.00 0.00 46.17 0.98
2981 5143 7.665690 TGGTAACATGCAACACTTCATTTATT 58.334 30.769 0.00 0.00 46.17 1.40
2982 5144 7.225784 TGGTAACATGCAACACTTCATTTAT 57.774 32.000 0.00 0.00 46.17 1.40
2983 5145 6.641169 TGGTAACATGCAACACTTCATTTA 57.359 33.333 0.00 0.00 46.17 1.40
2984 5146 5.528043 TGGTAACATGCAACACTTCATTT 57.472 34.783 0.00 0.00 46.17 2.32
3001 5163 9.104965 GCAAGTTTGTCTATATATGTGTGGTAA 57.895 33.333 0.00 0.00 0.00 2.85
3002 5164 7.713507 GGCAAGTTTGTCTATATATGTGTGGTA 59.286 37.037 0.00 0.00 0.00 3.25
3003 5165 6.542370 GGCAAGTTTGTCTATATATGTGTGGT 59.458 38.462 0.00 0.00 0.00 4.16
3004 5166 6.767902 AGGCAAGTTTGTCTATATATGTGTGG 59.232 38.462 0.00 0.00 42.19 4.17
3005 5167 7.792374 AGGCAAGTTTGTCTATATATGTGTG 57.208 36.000 0.00 0.00 42.19 3.82
3006 5168 8.046708 TCAAGGCAAGTTTGTCTATATATGTGT 58.953 33.333 0.00 0.00 43.42 3.72
3007 5169 8.437360 TCAAGGCAAGTTTGTCTATATATGTG 57.563 34.615 0.00 0.00 43.42 3.21
3012 5174 9.060347 CACATATCAAGGCAAGTTTGTCTATAT 57.940 33.333 0.00 0.00 43.42 0.86
3013 5175 8.046708 ACACATATCAAGGCAAGTTTGTCTATA 58.953 33.333 0.00 0.00 43.42 1.31
3014 5176 6.886459 ACACATATCAAGGCAAGTTTGTCTAT 59.114 34.615 0.00 0.00 43.42 1.98
3015 5177 6.149308 CACACATATCAAGGCAAGTTTGTCTA 59.851 38.462 0.00 0.00 43.42 2.59
3016 5178 5.048504 CACACATATCAAGGCAAGTTTGTCT 60.049 40.000 0.00 0.00 46.79 3.41
3017 5179 5.048782 TCACACATATCAAGGCAAGTTTGTC 60.049 40.000 0.00 0.00 0.00 3.18
3018 5180 4.826733 TCACACATATCAAGGCAAGTTTGT 59.173 37.500 0.00 0.00 0.00 2.83
3019 5181 5.375417 TCACACATATCAAGGCAAGTTTG 57.625 39.130 0.00 0.00 0.00 2.93
3020 5182 5.477984 ACATCACACATATCAAGGCAAGTTT 59.522 36.000 0.00 0.00 0.00 2.66
3021 5183 5.012239 ACATCACACATATCAAGGCAAGTT 58.988 37.500 0.00 0.00 0.00 2.66
3022 5184 4.592942 ACATCACACATATCAAGGCAAGT 58.407 39.130 0.00 0.00 0.00 3.16
3023 5185 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
3024 5186 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
3025 5187 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
3026 5188 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
3027 5189 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
3028 5190 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
3034 5196 9.409918 ACTAGTAGTATGAGTAACATCACACAT 57.590 33.333 0.00 0.00 40.07 3.21
3035 5197 8.803397 ACTAGTAGTATGAGTAACATCACACA 57.197 34.615 0.00 0.00 40.07 3.72
3046 5208 9.439500 GCATAGCTAGTTACTAGTAGTATGAGT 57.561 37.037 25.33 3.18 36.53 3.41
3047 5209 9.661563 AGCATAGCTAGTTACTAGTAGTATGAG 57.338 37.037 25.33 9.33 36.99 2.90
3050 5212 9.889128 GGTAGCATAGCTAGTTACTAGTAGTAT 57.111 37.037 19.12 11.54 42.11 2.12
3051 5213 8.874156 TGGTAGCATAGCTAGTTACTAGTAGTA 58.126 37.037 19.12 5.90 42.11 1.82
3052 5214 7.661027 GTGGTAGCATAGCTAGTTACTAGTAGT 59.339 40.741 19.12 8.14 42.11 2.73
3053 5215 7.879160 AGTGGTAGCATAGCTAGTTACTAGTAG 59.121 40.741 19.12 9.00 42.11 2.57
3054 5216 7.743749 AGTGGTAGCATAGCTAGTTACTAGTA 58.256 38.462 19.12 11.29 42.11 1.82
3055 5217 6.603224 AGTGGTAGCATAGCTAGTTACTAGT 58.397 40.000 19.12 0.00 42.11 2.57
3056 5218 7.513371 AAGTGGTAGCATAGCTAGTTACTAG 57.487 40.000 14.56 14.56 42.11 2.57
3057 5219 7.893124 AAAGTGGTAGCATAGCTAGTTACTA 57.107 36.000 0.00 0.12 42.11 1.82
3058 5220 6.793505 AAAGTGGTAGCATAGCTAGTTACT 57.206 37.500 0.00 2.19 42.11 2.24
3059 5221 7.266400 AGAAAAGTGGTAGCATAGCTAGTTAC 58.734 38.462 0.00 4.44 42.11 2.50
3060 5222 7.419711 AGAAAAGTGGTAGCATAGCTAGTTA 57.580 36.000 0.00 0.00 42.11 2.24
3061 5223 6.301169 AGAAAAGTGGTAGCATAGCTAGTT 57.699 37.500 0.00 0.00 42.11 2.24
3062 5224 5.941555 AGAAAAGTGGTAGCATAGCTAGT 57.058 39.130 0.00 0.00 42.11 2.57
3063 5225 7.044798 AGAAAGAAAAGTGGTAGCATAGCTAG 58.955 38.462 0.00 0.00 42.11 3.42
3064 5226 6.947464 AGAAAGAAAAGTGGTAGCATAGCTA 58.053 36.000 0.00 0.00 40.38 3.32
3065 5227 5.810095 AGAAAGAAAAGTGGTAGCATAGCT 58.190 37.500 0.00 0.00 40.38 3.32
3066 5228 6.502136 AAGAAAGAAAAGTGGTAGCATAGC 57.498 37.500 0.00 0.00 40.09 2.97
3067 5229 8.329203 AGAAAGAAAGAAAAGTGGTAGCATAG 57.671 34.615 0.00 0.00 0.00 2.23
3068 5230 8.691661 AAGAAAGAAAGAAAAGTGGTAGCATA 57.308 30.769 0.00 0.00 0.00 3.14
3069 5231 7.285401 TGAAGAAAGAAAGAAAAGTGGTAGCAT 59.715 33.333 0.00 0.00 0.00 3.79
3070 5232 6.601613 TGAAGAAAGAAAGAAAAGTGGTAGCA 59.398 34.615 0.00 0.00 0.00 3.49
3071 5233 7.027778 TGAAGAAAGAAAGAAAAGTGGTAGC 57.972 36.000 0.00 0.00 0.00 3.58



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.