Multiple sequence alignment - TraesCS6D01G180400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G180400 chr6D 100.000 4178 0 0 1 4178 199213930 199209753 0.000000e+00 7716.0
1 TraesCS6D01G180400 chr6A 97.426 3691 56 13 484 4157 255179212 255182880 0.000000e+00 6253.0
2 TraesCS6D01G180400 chr6A 97.297 37 0 1 454 490 255178859 255178894 1.250000e-05 62.1
3 TraesCS6D01G180400 chr6B 97.338 2554 46 7 1018 3556 320735149 320732603 0.000000e+00 4320.0
4 TraesCS6D01G180400 chr6B 94.943 613 23 4 3569 4178 320730036 320729429 0.000000e+00 953.0
5 TraesCS6D01G180400 chr6B 94.466 253 6 2 607 858 320735806 320735561 2.360000e-102 383.0
6 TraesCS6D01G180400 chr6B 94.521 146 7 1 470 615 320756681 320756537 1.510000e-54 224.0
7 TraesCS6D01G180400 chr6B 95.146 103 2 3 3512 3611 122970915 122970813 4.320000e-35 159.0
8 TraesCS6D01G180400 chr3D 96.173 392 13 2 1 390 81850523 81850914 1.270000e-179 640.0
9 TraesCS6D01G180400 chr3D 96.173 392 13 2 1 390 81855262 81855653 1.270000e-179 640.0
10 TraesCS6D01G180400 chr3D 95.918 392 14 2 1 390 81853682 81854073 5.890000e-178 634.0
11 TraesCS6D01G180400 chr3D 95.918 392 14 2 1 390 81856842 81857233 5.890000e-178 634.0
12 TraesCS6D01G180400 chr3D 95.408 392 16 2 1 390 81848944 81849335 1.280000e-174 623.0
13 TraesCS6D01G180400 chr3D 95.408 392 16 2 1 390 81852102 81852493 1.280000e-174 623.0
14 TraesCS6D01G180400 chr3D 94.898 392 18 2 1 390 81847365 81847756 2.760000e-171 612.0
15 TraesCS6D01G180400 chr7D 95.103 388 17 2 1 386 120310130 120310517 9.930000e-171 610.0
16 TraesCS6D01G180400 chr7D 94.118 102 5 1 3519 3619 498229838 498229939 2.010000e-33 154.0
17 TraesCS6D01G180400 chr1D 94.615 390 18 2 1 387 348114022 348113633 5.980000e-168 601.0
18 TraesCS6D01G180400 chr4B 100.000 89 0 0 3515 3603 192792743 192792831 9.290000e-37 165.0
19 TraesCS6D01G180400 chr3B 96.907 97 3 0 3511 3607 455140628 455140532 3.340000e-36 163.0
20 TraesCS6D01G180400 chr2D 96.875 96 3 0 3519 3614 302248013 302248108 1.200000e-35 161.0
21 TraesCS6D01G180400 chr1B 98.889 90 1 0 3517 3606 548535456 548535545 1.200000e-35 161.0
22 TraesCS6D01G180400 chr4A 96.842 95 3 0 3512 3606 603447580 603447674 4.320000e-35 159.0
23 TraesCS6D01G180400 chr5D 94.175 103 5 1 3510 3611 526559658 526559556 5.590000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G180400 chr6D 199209753 199213930 4177 True 7716.000000 7716 100.000000 1 4178 1 chr6D.!!$R1 4177
1 TraesCS6D01G180400 chr6A 255178859 255182880 4021 False 3157.550000 6253 97.361500 454 4157 2 chr6A.!!$F1 3703
2 TraesCS6D01G180400 chr6B 320729429 320735806 6377 True 1885.333333 4320 95.582333 607 4178 3 chr6B.!!$R3 3571
3 TraesCS6D01G180400 chr3D 81847365 81857233 9868 False 629.428571 640 95.699429 1 390 7 chr3D.!!$F1 389

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
280 282 0.032952 GAGTTGTCCTACGTGGCACA 59.967 55.0 19.09 0.0 35.26 4.57 F
315 317 0.040514 CGTGCCAAGATTCGTGCAAA 60.041 50.0 0.00 0.0 35.16 3.68 F
381 383 0.042535 CACACGTGTTGGCGTTAGTG 60.043 55.0 20.79 0.0 43.83 2.74 F
382 384 0.460635 ACACGTGTTGGCGTTAGTGT 60.461 50.0 17.22 0.0 43.83 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2940 8428 6.070653 TGTTCTGTATTACCGTATTCAACCCT 60.071 38.462 0.00 0.0 0.00 4.34 R
3012 8500 2.294233 GCTTCTTTGGCACATCTTGACA 59.706 45.455 0.00 0.0 43.86 3.58 R
3150 9984 2.666022 CACGTGCACTGATATCGAAACA 59.334 45.455 16.19 0.0 0.00 2.83 R
3451 10291 8.603242 ATTATTATCCGGCTAGTTTACAACAG 57.397 34.615 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 28 0.110823 GCGCTACAAAACAGACGTGG 60.111 55.000 0.00 0.00 0.00 4.94
66 68 4.783227 AGGGTAAAAGAGAGTTGCCATCTA 59.217 41.667 0.00 0.00 32.79 1.98
77 79 6.893583 AGAGTTGCCATCTACTTACAATCAT 58.106 36.000 0.00 0.00 0.00 2.45
88 90 4.012374 ACTTACAATCATGAACAGGGCAG 58.988 43.478 0.00 0.00 0.00 4.85
89 91 2.592102 ACAATCATGAACAGGGCAGT 57.408 45.000 0.00 0.00 0.00 4.40
90 92 2.880443 ACAATCATGAACAGGGCAGTT 58.120 42.857 0.00 0.00 0.00 3.16
91 93 2.559668 ACAATCATGAACAGGGCAGTTG 59.440 45.455 0.00 0.00 0.00 3.16
92 94 2.559668 CAATCATGAACAGGGCAGTTGT 59.440 45.455 0.00 0.00 0.00 3.32
93 95 1.896220 TCATGAACAGGGCAGTTGTC 58.104 50.000 0.00 0.00 0.00 3.18
94 96 1.142667 TCATGAACAGGGCAGTTGTCA 59.857 47.619 0.00 0.00 0.00 3.58
95 97 2.165167 CATGAACAGGGCAGTTGTCAT 58.835 47.619 0.00 0.00 0.00 3.06
96 98 1.608055 TGAACAGGGCAGTTGTCATG 58.392 50.000 0.00 0.00 37.47 3.07
98 100 2.105649 TGAACAGGGCAGTTGTCATGTA 59.894 45.455 4.35 0.00 44.34 2.29
99 101 2.949177 ACAGGGCAGTTGTCATGTAA 57.051 45.000 1.80 0.00 43.23 2.41
100 102 2.504367 ACAGGGCAGTTGTCATGTAAC 58.496 47.619 1.80 7.28 43.23 2.50
101 103 1.812571 CAGGGCAGTTGTCATGTAACC 59.187 52.381 10.53 0.00 0.00 2.85
102 104 1.705186 AGGGCAGTTGTCATGTAACCT 59.295 47.619 10.53 0.00 0.00 3.50
103 105 1.812571 GGGCAGTTGTCATGTAACCTG 59.187 52.381 10.53 6.46 0.00 4.00
104 106 1.200020 GGCAGTTGTCATGTAACCTGC 59.800 52.381 16.41 16.41 34.46 4.85
105 107 1.879380 GCAGTTGTCATGTAACCTGCA 59.121 47.619 18.44 0.00 34.89 4.41
106 108 2.293122 GCAGTTGTCATGTAACCTGCAA 59.707 45.455 18.44 3.06 34.89 4.08
107 109 3.243367 GCAGTTGTCATGTAACCTGCAAA 60.243 43.478 18.44 0.00 34.89 3.68
108 110 4.736168 GCAGTTGTCATGTAACCTGCAAAA 60.736 41.667 18.44 0.00 34.89 2.44
109 111 5.347342 CAGTTGTCATGTAACCTGCAAAAA 58.653 37.500 10.53 0.00 0.00 1.94
124 126 3.704100 AAAAACATGGCAACTGGGC 57.296 47.368 0.00 0.00 43.73 5.36
131 133 3.357079 GGCAACTGGGCAGTCGTG 61.357 66.667 0.00 0.00 41.58 4.35
132 134 3.357079 GCAACTGGGCAGTCGTGG 61.357 66.667 0.00 0.00 41.58 4.94
133 135 2.669569 CAACTGGGCAGTCGTGGG 60.670 66.667 0.00 0.00 41.58 4.61
134 136 2.847234 AACTGGGCAGTCGTGGGA 60.847 61.111 0.00 0.00 41.58 4.37
135 137 2.883828 AACTGGGCAGTCGTGGGAG 61.884 63.158 0.00 0.00 41.58 4.30
136 138 2.997315 CTGGGCAGTCGTGGGAGA 60.997 66.667 0.00 0.00 0.00 3.71
137 139 2.284625 TGGGCAGTCGTGGGAGAT 60.285 61.111 0.00 0.00 0.00 2.75
138 140 2.187946 GGGCAGTCGTGGGAGATG 59.812 66.667 0.00 0.00 0.00 2.90
139 141 2.187946 GGCAGTCGTGGGAGATGG 59.812 66.667 0.00 0.00 0.00 3.51
140 142 2.187946 GCAGTCGTGGGAGATGGG 59.812 66.667 0.00 0.00 0.00 4.00
141 143 2.903357 CAGTCGTGGGAGATGGGG 59.097 66.667 0.00 0.00 0.00 4.96
142 144 1.685765 CAGTCGTGGGAGATGGGGA 60.686 63.158 0.00 0.00 0.00 4.81
143 145 1.080354 AGTCGTGGGAGATGGGGAA 59.920 57.895 0.00 0.00 0.00 3.97
144 146 1.221021 GTCGTGGGAGATGGGGAAC 59.779 63.158 0.00 0.00 0.00 3.62
145 147 1.229368 TCGTGGGAGATGGGGAACA 60.229 57.895 0.00 0.00 0.00 3.18
146 148 1.221840 CGTGGGAGATGGGGAACAG 59.778 63.158 0.00 0.00 0.00 3.16
147 149 1.264749 CGTGGGAGATGGGGAACAGA 61.265 60.000 0.00 0.00 0.00 3.41
148 150 0.991920 GTGGGAGATGGGGAACAGAA 59.008 55.000 0.00 0.00 0.00 3.02
149 151 1.065126 GTGGGAGATGGGGAACAGAAG 60.065 57.143 0.00 0.00 0.00 2.85
150 152 1.290134 GGGAGATGGGGAACAGAAGT 58.710 55.000 0.00 0.00 0.00 3.01
151 153 1.210722 GGGAGATGGGGAACAGAAGTC 59.789 57.143 0.00 0.00 0.00 3.01
152 154 1.134670 GGAGATGGGGAACAGAAGTCG 60.135 57.143 0.00 0.00 0.00 4.18
153 155 1.550976 GAGATGGGGAACAGAAGTCGT 59.449 52.381 0.00 0.00 0.00 4.34
154 156 1.276421 AGATGGGGAACAGAAGTCGTG 59.724 52.381 0.00 0.00 0.00 4.35
155 157 0.321653 ATGGGGAACAGAAGTCGTGC 60.322 55.000 0.00 0.00 0.00 5.34
156 158 2.027625 GGGGAACAGAAGTCGTGCG 61.028 63.158 0.00 0.00 0.00 5.34
157 159 2.027625 GGGAACAGAAGTCGTGCGG 61.028 63.158 0.00 0.00 0.00 5.69
158 160 2.027625 GGAACAGAAGTCGTGCGGG 61.028 63.158 0.00 0.00 0.00 6.13
159 161 1.006571 GAACAGAAGTCGTGCGGGA 60.007 57.895 0.00 0.00 0.00 5.14
160 162 1.282930 GAACAGAAGTCGTGCGGGAC 61.283 60.000 0.00 0.00 37.19 4.46
204 206 4.025401 CACGCCCCAGTCGCAAAC 62.025 66.667 0.00 0.00 0.00 2.93
208 210 3.726517 CCCCAGTCGCAAACGCTG 61.727 66.667 0.00 0.00 40.66 5.18
209 211 2.664851 CCCAGTCGCAAACGCTGA 60.665 61.111 10.11 0.00 42.32 4.26
210 212 2.551270 CCAGTCGCAAACGCTGAC 59.449 61.111 10.11 0.00 42.32 3.51
211 213 2.243957 CCAGTCGCAAACGCTGACA 61.244 57.895 10.11 0.00 42.32 3.58
212 214 1.568612 CCAGTCGCAAACGCTGACAT 61.569 55.000 10.11 0.00 42.32 3.06
213 215 0.179240 CAGTCGCAAACGCTGACATC 60.179 55.000 10.42 0.00 42.32 3.06
214 216 1.225475 GTCGCAAACGCTGACATCG 60.225 57.895 0.00 0.00 39.84 3.84
215 217 2.096406 CGCAAACGCTGACATCGG 59.904 61.111 3.49 0.00 0.00 4.18
216 218 2.379634 CGCAAACGCTGACATCGGA 61.380 57.895 3.49 0.00 0.00 4.55
217 219 1.866237 GCAAACGCTGACATCGGAA 59.134 52.632 3.49 0.00 0.00 4.30
218 220 0.179215 GCAAACGCTGACATCGGAAG 60.179 55.000 3.49 0.00 0.00 3.46
219 221 0.443869 CAAACGCTGACATCGGAAGG 59.556 55.000 3.49 0.00 0.00 3.46
220 222 0.320374 AAACGCTGACATCGGAAGGA 59.680 50.000 3.49 0.00 0.00 3.36
221 223 0.320374 AACGCTGACATCGGAAGGAA 59.680 50.000 3.49 0.00 0.00 3.36
222 224 0.320374 ACGCTGACATCGGAAGGAAA 59.680 50.000 3.49 0.00 0.00 3.13
223 225 1.270625 ACGCTGACATCGGAAGGAAAA 60.271 47.619 3.49 0.00 0.00 2.29
224 226 1.128692 CGCTGACATCGGAAGGAAAAC 59.871 52.381 0.00 0.00 0.00 2.43
225 227 2.151202 GCTGACATCGGAAGGAAAACA 58.849 47.619 0.00 0.00 0.00 2.83
226 228 2.160417 GCTGACATCGGAAGGAAAACAG 59.840 50.000 0.00 0.00 0.00 3.16
227 229 2.151202 TGACATCGGAAGGAAAACAGC 58.849 47.619 0.00 0.00 0.00 4.40
228 230 1.128692 GACATCGGAAGGAAAACAGCG 59.871 52.381 0.00 0.00 0.00 5.18
229 231 1.156736 CATCGGAAGGAAAACAGCGT 58.843 50.000 0.00 0.00 0.00 5.07
230 232 1.135972 CATCGGAAGGAAAACAGCGTG 60.136 52.381 0.00 0.00 0.00 5.34
231 233 1.082104 CGGAAGGAAAACAGCGTGC 60.082 57.895 0.00 0.00 0.00 5.34
232 234 1.082104 GGAAGGAAAACAGCGTGCG 60.082 57.895 0.00 0.00 0.00 5.34
233 235 1.082104 GAAGGAAAACAGCGTGCGG 60.082 57.895 0.00 0.00 0.00 5.69
234 236 2.458006 GAAGGAAAACAGCGTGCGGG 62.458 60.000 0.00 0.00 0.00 6.13
235 237 4.700365 GGAAAACAGCGTGCGGGC 62.700 66.667 0.00 0.00 0.00 6.13
248 250 3.691342 CGGGCGAACTCCCTCACA 61.691 66.667 0.00 0.00 44.30 3.58
249 251 2.990479 GGGCGAACTCCCTCACAT 59.010 61.111 0.00 0.00 43.13 3.21
250 252 1.450312 GGGCGAACTCCCTCACATG 60.450 63.158 0.00 0.00 43.13 3.21
251 253 2.109126 GGCGAACTCCCTCACATGC 61.109 63.158 0.00 0.00 0.00 4.06
252 254 2.109126 GCGAACTCCCTCACATGCC 61.109 63.158 0.00 0.00 0.00 4.40
253 255 1.296392 CGAACTCCCTCACATGCCA 59.704 57.895 0.00 0.00 0.00 4.92
254 256 1.021390 CGAACTCCCTCACATGCCAC 61.021 60.000 0.00 0.00 0.00 5.01
255 257 0.036732 GAACTCCCTCACATGCCACA 59.963 55.000 0.00 0.00 0.00 4.17
256 258 0.250901 AACTCCCTCACATGCCACAC 60.251 55.000 0.00 0.00 0.00 3.82
257 259 1.376086 CTCCCTCACATGCCACACA 59.624 57.895 0.00 0.00 0.00 3.72
258 260 0.957395 CTCCCTCACATGCCACACAC 60.957 60.000 0.00 0.00 0.00 3.82
259 261 2.327343 CCCTCACATGCCACACACG 61.327 63.158 0.00 0.00 0.00 4.49
260 262 2.557805 CTCACATGCCACACACGC 59.442 61.111 0.00 0.00 0.00 5.34
261 263 3.299304 CTCACATGCCACACACGCG 62.299 63.158 3.53 3.53 0.00 6.01
262 264 3.345011 CACATGCCACACACGCGA 61.345 61.111 15.93 0.00 0.00 5.87
263 265 3.043713 ACATGCCACACACGCGAG 61.044 61.111 15.93 7.88 0.00 5.03
265 267 2.280797 ATGCCACACACGCGAGTT 60.281 55.556 15.93 0.00 46.40 3.01
266 268 2.606961 ATGCCACACACGCGAGTTG 61.607 57.895 15.93 12.10 46.40 3.16
267 269 3.269347 GCCACACACGCGAGTTGT 61.269 61.111 15.93 9.84 46.40 3.32
268 270 2.928361 CCACACACGCGAGTTGTC 59.072 61.111 15.93 0.00 46.40 3.18
269 271 2.594962 CCACACACGCGAGTTGTCC 61.595 63.158 15.93 0.00 46.40 4.02
270 272 1.591594 CACACACGCGAGTTGTCCT 60.592 57.895 15.93 0.00 46.40 3.85
271 273 0.318360 CACACACGCGAGTTGTCCTA 60.318 55.000 15.93 0.00 46.40 2.94
272 274 0.318445 ACACACGCGAGTTGTCCTAC 60.318 55.000 15.93 0.00 46.40 3.18
273 275 1.081641 ACACGCGAGTTGTCCTACG 60.082 57.895 15.93 0.00 46.40 3.51
274 276 1.081641 CACGCGAGTTGTCCTACGT 60.082 57.895 15.93 0.00 46.40 3.57
275 277 1.081641 ACGCGAGTTGTCCTACGTG 60.082 57.895 15.93 0.00 46.40 4.49
276 278 1.800315 CGCGAGTTGTCCTACGTGG 60.800 63.158 0.00 0.00 33.59 4.94
277 279 2.092882 GCGAGTTGTCCTACGTGGC 61.093 63.158 0.00 0.00 35.26 5.01
278 280 1.287815 CGAGTTGTCCTACGTGGCA 59.712 57.895 0.00 0.00 35.26 4.92
279 281 1.007336 CGAGTTGTCCTACGTGGCAC 61.007 60.000 7.79 7.79 35.26 5.01
280 282 0.032952 GAGTTGTCCTACGTGGCACA 59.967 55.000 19.09 0.00 35.26 4.57
292 294 2.048601 TGGCACACAAAATCAGCCC 58.951 52.632 0.00 0.00 44.60 5.19
293 295 0.469705 TGGCACACAAAATCAGCCCT 60.470 50.000 0.00 0.00 44.60 5.19
294 296 0.244721 GGCACACAAAATCAGCCCTC 59.755 55.000 0.00 0.00 39.42 4.30
295 297 1.251251 GCACACAAAATCAGCCCTCT 58.749 50.000 0.00 0.00 0.00 3.69
296 298 1.200948 GCACACAAAATCAGCCCTCTC 59.799 52.381 0.00 0.00 0.00 3.20
297 299 1.466167 CACACAAAATCAGCCCTCTCG 59.534 52.381 0.00 0.00 0.00 4.04
298 300 1.072331 ACACAAAATCAGCCCTCTCGT 59.928 47.619 0.00 0.00 0.00 4.18
299 301 1.466167 CACAAAATCAGCCCTCTCGTG 59.534 52.381 0.00 0.00 0.00 4.35
300 302 0.449388 CAAAATCAGCCCTCTCGTGC 59.551 55.000 0.00 0.00 0.00 5.34
301 303 0.678048 AAAATCAGCCCTCTCGTGCC 60.678 55.000 0.00 0.00 0.00 5.01
302 304 1.841302 AAATCAGCCCTCTCGTGCCA 61.841 55.000 0.00 0.00 0.00 4.92
303 305 1.841302 AATCAGCCCTCTCGTGCCAA 61.841 55.000 0.00 0.00 0.00 4.52
304 306 2.249413 ATCAGCCCTCTCGTGCCAAG 62.249 60.000 0.00 0.00 0.00 3.61
305 307 2.604686 AGCCCTCTCGTGCCAAGA 60.605 61.111 0.00 0.00 0.00 3.02
306 308 1.992277 AGCCCTCTCGTGCCAAGAT 60.992 57.895 0.00 0.00 0.00 2.40
307 309 1.078143 GCCCTCTCGTGCCAAGATT 60.078 57.895 0.00 0.00 0.00 2.40
308 310 1.092345 GCCCTCTCGTGCCAAGATTC 61.092 60.000 0.00 0.00 0.00 2.52
309 311 0.807667 CCCTCTCGTGCCAAGATTCG 60.808 60.000 0.00 0.00 0.00 3.34
310 312 0.108615 CCTCTCGTGCCAAGATTCGT 60.109 55.000 0.00 0.00 0.00 3.85
311 313 0.994995 CTCTCGTGCCAAGATTCGTG 59.005 55.000 0.00 0.00 0.00 4.35
312 314 1.014044 TCTCGTGCCAAGATTCGTGC 61.014 55.000 0.00 0.00 0.00 5.34
313 315 1.291184 CTCGTGCCAAGATTCGTGCA 61.291 55.000 0.00 0.00 0.00 4.57
314 316 0.882484 TCGTGCCAAGATTCGTGCAA 60.882 50.000 0.00 0.00 35.16 4.08
315 317 0.040514 CGTGCCAAGATTCGTGCAAA 60.041 50.000 0.00 0.00 35.16 3.68
316 318 1.599171 CGTGCCAAGATTCGTGCAAAA 60.599 47.619 0.00 0.00 35.16 2.44
317 319 2.053627 GTGCCAAGATTCGTGCAAAAG 58.946 47.619 0.00 0.00 35.16 2.27
318 320 1.000385 TGCCAAGATTCGTGCAAAAGG 60.000 47.619 0.00 0.00 0.00 3.11
319 321 1.000274 GCCAAGATTCGTGCAAAAGGT 60.000 47.619 0.00 0.00 0.00 3.50
320 322 2.227865 GCCAAGATTCGTGCAAAAGGTA 59.772 45.455 0.00 0.00 0.00 3.08
321 323 3.821841 CCAAGATTCGTGCAAAAGGTAC 58.178 45.455 0.00 0.00 0.00 3.34
323 325 4.466828 CAAGATTCGTGCAAAAGGTACTG 58.533 43.478 0.00 0.00 40.86 2.74
324 326 3.074412 AGATTCGTGCAAAAGGTACTGG 58.926 45.455 0.00 0.00 40.86 4.00
325 327 2.623878 TTCGTGCAAAAGGTACTGGA 57.376 45.000 0.00 0.00 40.86 3.86
326 328 2.851263 TCGTGCAAAAGGTACTGGAT 57.149 45.000 0.00 0.00 40.86 3.41
327 329 2.422597 TCGTGCAAAAGGTACTGGATG 58.577 47.619 0.00 0.00 40.86 3.51
328 330 1.468520 CGTGCAAAAGGTACTGGATGG 59.531 52.381 0.00 0.00 40.86 3.51
329 331 2.514803 GTGCAAAAGGTACTGGATGGT 58.485 47.619 0.00 0.00 40.86 3.55
330 332 2.228822 GTGCAAAAGGTACTGGATGGTG 59.771 50.000 0.00 0.00 40.86 4.17
331 333 2.107378 TGCAAAAGGTACTGGATGGTGA 59.893 45.455 0.00 0.00 40.86 4.02
332 334 3.245229 TGCAAAAGGTACTGGATGGTGAT 60.245 43.478 0.00 0.00 40.86 3.06
333 335 3.378427 GCAAAAGGTACTGGATGGTGATC 59.622 47.826 0.00 0.00 40.86 2.92
334 336 3.543680 AAAGGTACTGGATGGTGATCG 57.456 47.619 0.00 0.00 40.86 3.69
335 337 2.454336 AGGTACTGGATGGTGATCGA 57.546 50.000 0.00 0.00 37.18 3.59
336 338 2.311463 AGGTACTGGATGGTGATCGAG 58.689 52.381 0.00 0.00 39.65 4.04
337 339 1.341531 GGTACTGGATGGTGATCGAGG 59.658 57.143 0.00 0.00 38.43 4.63
338 340 1.040646 TACTGGATGGTGATCGAGGC 58.959 55.000 0.00 0.00 38.43 4.70
339 341 1.300465 CTGGATGGTGATCGAGGCG 60.300 63.158 0.00 0.00 32.25 5.52
340 342 2.021068 CTGGATGGTGATCGAGGCGT 62.021 60.000 0.00 0.00 32.25 5.68
341 343 1.592669 GGATGGTGATCGAGGCGTG 60.593 63.158 0.00 0.00 0.00 5.34
342 344 1.141881 GATGGTGATCGAGGCGTGT 59.858 57.895 0.00 0.00 0.00 4.49
343 345 1.148157 GATGGTGATCGAGGCGTGTG 61.148 60.000 0.00 0.00 0.00 3.82
344 346 2.509336 GGTGATCGAGGCGTGTGG 60.509 66.667 0.00 0.00 0.00 4.17
345 347 2.509336 GTGATCGAGGCGTGTGGG 60.509 66.667 0.00 0.00 0.00 4.61
346 348 4.451150 TGATCGAGGCGTGTGGGC 62.451 66.667 0.00 0.00 42.69 5.36
355 357 4.988598 CGTGTGGGCGAGTTGGCT 62.989 66.667 3.60 0.00 44.11 4.75
356 358 2.345991 GTGTGGGCGAGTTGGCTA 59.654 61.111 3.60 0.00 44.11 3.93
357 359 1.302192 GTGTGGGCGAGTTGGCTAA 60.302 57.895 3.60 0.00 44.11 3.09
358 360 1.302192 TGTGGGCGAGTTGGCTAAC 60.302 57.895 4.51 4.51 44.11 2.34
359 361 2.047655 TGGGCGAGTTGGCTAACG 60.048 61.111 7.35 0.00 44.11 3.18
360 362 2.047560 GGGCGAGTTGGCTAACGT 60.048 61.111 7.35 0.00 44.11 3.99
361 363 2.098831 GGGCGAGTTGGCTAACGTC 61.099 63.158 7.35 5.04 44.11 4.34
362 364 2.098831 GGCGAGTTGGCTAACGTCC 61.099 63.158 7.35 6.38 41.71 4.79
363 365 1.373748 GCGAGTTGGCTAACGTCCA 60.374 57.895 7.35 0.00 41.71 4.02
364 366 1.623973 GCGAGTTGGCTAACGTCCAC 61.624 60.000 7.35 0.00 41.71 4.02
365 367 0.319211 CGAGTTGGCTAACGTCCACA 60.319 55.000 7.35 0.00 41.71 4.17
366 368 1.145803 GAGTTGGCTAACGTCCACAC 58.854 55.000 7.35 0.00 41.71 3.82
375 377 3.995669 CGTCCACACGTGTTGGCG 61.996 66.667 28.45 28.45 41.42 5.69
376 378 2.893404 GTCCACACGTGTTGGCGT 60.893 61.111 20.79 0.00 46.88 5.68
377 379 2.125065 TCCACACGTGTTGGCGTT 60.125 55.556 20.79 0.00 43.83 4.84
378 380 1.143401 TCCACACGTGTTGGCGTTA 59.857 52.632 20.79 5.43 43.83 3.18
379 381 0.876777 TCCACACGTGTTGGCGTTAG 60.877 55.000 20.79 4.83 43.83 2.34
380 382 1.155424 CCACACGTGTTGGCGTTAGT 61.155 55.000 20.79 0.00 43.83 2.24
381 383 0.042535 CACACGTGTTGGCGTTAGTG 60.043 55.000 20.79 0.00 43.83 2.74
382 384 0.460635 ACACGTGTTGGCGTTAGTGT 60.461 50.000 17.22 0.00 43.83 3.55
383 385 0.653636 CACGTGTTGGCGTTAGTGTT 59.346 50.000 7.58 0.00 43.83 3.32
384 386 1.062880 CACGTGTTGGCGTTAGTGTTT 59.937 47.619 7.58 0.00 43.83 2.83
385 387 1.738908 ACGTGTTGGCGTTAGTGTTTT 59.261 42.857 0.00 0.00 43.04 2.43
386 388 2.223089 ACGTGTTGGCGTTAGTGTTTTC 60.223 45.455 0.00 0.00 43.04 2.29
387 389 2.368685 GTGTTGGCGTTAGTGTTTTCG 58.631 47.619 0.00 0.00 0.00 3.46
388 390 2.008329 TGTTGGCGTTAGTGTTTTCGT 58.992 42.857 0.00 0.00 0.00 3.85
389 391 3.001127 GTGTTGGCGTTAGTGTTTTCGTA 59.999 43.478 0.00 0.00 0.00 3.43
390 392 3.620374 TGTTGGCGTTAGTGTTTTCGTAA 59.380 39.130 0.00 0.00 0.00 3.18
391 393 4.272991 TGTTGGCGTTAGTGTTTTCGTAAT 59.727 37.500 0.00 0.00 0.00 1.89
392 394 5.464722 TGTTGGCGTTAGTGTTTTCGTAATA 59.535 36.000 0.00 0.00 0.00 0.98
393 395 6.147492 TGTTGGCGTTAGTGTTTTCGTAATAT 59.853 34.615 0.00 0.00 0.00 1.28
394 396 6.724694 TGGCGTTAGTGTTTTCGTAATATT 57.275 33.333 0.00 0.00 0.00 1.28
395 397 7.824704 TGGCGTTAGTGTTTTCGTAATATTA 57.175 32.000 0.00 0.00 0.00 0.98
396 398 7.897920 TGGCGTTAGTGTTTTCGTAATATTAG 58.102 34.615 0.00 0.00 0.00 1.73
397 399 7.010367 TGGCGTTAGTGTTTTCGTAATATTAGG 59.990 37.037 8.57 8.57 0.00 2.69
398 400 7.339953 GCGTTAGTGTTTTCGTAATATTAGGG 58.660 38.462 13.69 2.04 0.00 3.53
399 401 7.339953 CGTTAGTGTTTTCGTAATATTAGGGC 58.660 38.462 13.69 4.87 0.00 5.19
400 402 7.517259 CGTTAGTGTTTTCGTAATATTAGGGCC 60.517 40.741 13.69 0.00 0.00 5.80
401 403 5.997843 AGTGTTTTCGTAATATTAGGGCCT 58.002 37.500 12.58 12.58 0.00 5.19
402 404 5.820947 AGTGTTTTCGTAATATTAGGGCCTG 59.179 40.000 18.53 0.00 0.00 4.85
403 405 5.818857 GTGTTTTCGTAATATTAGGGCCTGA 59.181 40.000 18.53 8.90 0.00 3.86
404 406 5.818857 TGTTTTCGTAATATTAGGGCCTGAC 59.181 40.000 18.53 3.51 0.00 3.51
405 407 4.612264 TTCGTAATATTAGGGCCTGACC 57.388 45.455 18.53 0.00 37.93 4.02
406 408 3.578978 TCGTAATATTAGGGCCTGACCA 58.421 45.455 18.53 0.00 42.05 4.02
407 409 4.164981 TCGTAATATTAGGGCCTGACCAT 58.835 43.478 18.53 2.03 42.05 3.55
408 410 4.222145 TCGTAATATTAGGGCCTGACCATC 59.778 45.833 18.53 0.33 42.05 3.51
409 411 4.020573 CGTAATATTAGGGCCTGACCATCA 60.021 45.833 18.53 0.00 42.05 3.07
410 412 5.512404 CGTAATATTAGGGCCTGACCATCAA 60.512 44.000 18.53 0.00 42.05 2.57
411 413 5.402054 AATATTAGGGCCTGACCATCAAA 57.598 39.130 18.53 0.00 42.05 2.69
412 414 3.979501 ATTAGGGCCTGACCATCAAAT 57.020 42.857 18.53 1.69 42.05 2.32
413 415 3.756082 TTAGGGCCTGACCATCAAATT 57.244 42.857 18.53 0.00 42.05 1.82
414 416 2.629017 AGGGCCTGACCATCAAATTT 57.371 45.000 4.50 0.00 42.05 1.82
415 417 2.906568 AGGGCCTGACCATCAAATTTT 58.093 42.857 4.50 0.00 42.05 1.82
416 418 2.833943 AGGGCCTGACCATCAAATTTTC 59.166 45.455 4.50 0.00 42.05 2.29
417 419 2.833943 GGGCCTGACCATCAAATTTTCT 59.166 45.455 0.84 0.00 42.05 2.52
418 420 3.261643 GGGCCTGACCATCAAATTTTCTT 59.738 43.478 0.84 0.00 42.05 2.52
419 421 4.263025 GGGCCTGACCATCAAATTTTCTTT 60.263 41.667 0.84 0.00 42.05 2.52
420 422 4.931601 GGCCTGACCATCAAATTTTCTTTC 59.068 41.667 0.00 0.00 38.86 2.62
421 423 4.622740 GCCTGACCATCAAATTTTCTTTCG 59.377 41.667 0.00 0.00 0.00 3.46
422 424 5.772521 CCTGACCATCAAATTTTCTTTCGT 58.227 37.500 0.00 0.00 0.00 3.85
423 425 5.858581 CCTGACCATCAAATTTTCTTTCGTC 59.141 40.000 0.00 0.00 0.00 4.20
424 426 6.294176 CCTGACCATCAAATTTTCTTTCGTCT 60.294 38.462 0.00 0.00 0.00 4.18
425 427 7.038154 TGACCATCAAATTTTCTTTCGTCTT 57.962 32.000 0.00 0.00 0.00 3.01
426 428 7.488322 TGACCATCAAATTTTCTTTCGTCTTT 58.512 30.769 0.00 0.00 0.00 2.52
427 429 7.978975 TGACCATCAAATTTTCTTTCGTCTTTT 59.021 29.630 0.00 0.00 0.00 2.27
428 430 8.716646 ACCATCAAATTTTCTTTCGTCTTTTT 57.283 26.923 0.00 0.00 0.00 1.94
451 453 6.576551 TTTTTGACGGGAAATTTTCTTTCG 57.423 33.333 8.93 11.91 0.00 3.46
452 454 4.904253 TTGACGGGAAATTTTCTTTCGT 57.096 36.364 17.99 17.99 35.15 3.85
638 963 3.044059 GCGCAGAGGGTTGACATGC 62.044 63.158 0.30 0.00 0.00 4.06
874 1200 4.890306 GCCTCCCTCCCTCCCTCC 62.890 77.778 0.00 0.00 0.00 4.30
875 1201 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
876 1202 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
877 1203 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
878 1204 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
892 1218 1.077663 TCCCTCCACCTAACCTAACGT 59.922 52.381 0.00 0.00 0.00 3.99
933 1259 3.222603 ACGCAAGGATCCAAGAAAAAGT 58.777 40.909 15.82 0.00 46.39 2.66
952 1279 2.355115 GGGGTGGACCGATTTGCT 59.645 61.111 0.00 0.00 41.60 3.91
956 1283 1.313091 GGTGGACCGATTTGCTTCCC 61.313 60.000 0.00 0.00 0.00 3.97
972 1299 4.252878 GCTTCCCTTTTCTTCTCTCTCTG 58.747 47.826 0.00 0.00 0.00 3.35
973 1300 3.971245 TCCCTTTTCTTCTCTCTCTGC 57.029 47.619 0.00 0.00 0.00 4.26
974 1301 3.242867 TCCCTTTTCTTCTCTCTCTGCA 58.757 45.455 0.00 0.00 0.00 4.41
975 1302 3.260380 TCCCTTTTCTTCTCTCTCTGCAG 59.740 47.826 7.63 7.63 0.00 4.41
1575 2153 4.514577 CTACGCCACCGCCTCCTG 62.515 72.222 0.00 0.00 38.22 3.86
2055 2642 2.096406 CTTGTGCCGAATCGTGCG 59.904 61.111 0.82 0.00 0.00 5.34
2940 8428 3.096852 TCGGAGAGTAGCAAAGATTCCA 58.903 45.455 0.00 0.00 0.00 3.53
3012 8500 4.798593 GCCAAGAAGAAAGCAAGCTTGATT 60.799 41.667 30.39 26.99 38.62 2.57
3150 9984 2.232452 CAGTGGAGAGTTGTCGAATCCT 59.768 50.000 0.00 0.00 0.00 3.24
3271 10106 7.701539 TGCTCAAAATGAAGGTATACAACAT 57.298 32.000 5.01 4.31 0.00 2.71
3451 10291 7.375053 TCCATTTTTCAAAACACTATGCTACC 58.625 34.615 0.00 0.00 0.00 3.18
3526 10366 5.454897 GGAAGGGATTGTAATGTACTCCCTC 60.455 48.000 15.05 9.69 46.89 4.30
3805 13206 1.945394 GCTCATTGTATGGAGGTGCTG 59.055 52.381 0.00 0.00 0.00 4.41
3806 13207 2.420547 GCTCATTGTATGGAGGTGCTGA 60.421 50.000 0.00 0.00 0.00 4.26
3807 13208 3.201290 CTCATTGTATGGAGGTGCTGAC 58.799 50.000 0.00 0.00 0.00 3.51
3828 13229 7.113658 TGACCTAGAAGACCAACAAGATATC 57.886 40.000 0.00 0.00 0.00 1.63
4054 14227 6.403636 GGTCAAATATACTTCTGTTGCAGTGG 60.404 42.308 0.00 0.00 32.61 4.00
4127 14300 5.051106 CGTTTCAAAATGTTCGGCTTGATTT 60.051 36.000 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.058293 ACATGTTATTGTTGCCACGTCTG 60.058 43.478 0.00 0.00 0.00 3.51
26 28 4.519540 ACCCTGAACATGTTATTGTTGC 57.480 40.909 11.95 0.00 39.85 4.17
66 68 4.012374 CTGCCCTGTTCATGATTGTAAGT 58.988 43.478 0.00 0.00 0.00 2.24
77 79 1.133823 ACATGACAACTGCCCTGTTCA 60.134 47.619 0.00 0.00 0.00 3.18
106 108 0.835941 TGCCCAGTTGCCATGTTTTT 59.164 45.000 0.00 0.00 0.00 1.94
107 109 0.393820 CTGCCCAGTTGCCATGTTTT 59.606 50.000 0.00 0.00 0.00 2.43
108 110 0.760189 ACTGCCCAGTTGCCATGTTT 60.760 50.000 0.00 0.00 38.83 2.83
109 111 1.152483 ACTGCCCAGTTGCCATGTT 60.152 52.632 0.00 0.00 38.83 2.71
110 112 1.604593 GACTGCCCAGTTGCCATGT 60.605 57.895 2.02 0.00 42.66 3.21
111 113 2.693762 CGACTGCCCAGTTGCCATG 61.694 63.158 2.02 0.00 42.66 3.66
112 114 2.360350 CGACTGCCCAGTTGCCAT 60.360 61.111 2.02 0.00 42.66 4.40
113 115 3.872603 ACGACTGCCCAGTTGCCA 61.873 61.111 14.14 0.00 44.78 4.92
114 116 3.357079 CACGACTGCCCAGTTGCC 61.357 66.667 14.14 0.00 44.78 4.52
115 117 3.357079 CCACGACTGCCCAGTTGC 61.357 66.667 14.14 0.00 44.78 4.17
116 118 2.669569 CCCACGACTGCCCAGTTG 60.670 66.667 12.92 12.92 46.03 3.16
117 119 2.847234 TCCCACGACTGCCCAGTT 60.847 61.111 2.02 0.00 42.66 3.16
118 120 3.314331 CTCCCACGACTGCCCAGT 61.314 66.667 0.00 0.00 45.84 4.00
119 121 2.362369 ATCTCCCACGACTGCCCAG 61.362 63.158 0.00 0.00 0.00 4.45
120 122 2.284625 ATCTCCCACGACTGCCCA 60.285 61.111 0.00 0.00 0.00 5.36
121 123 2.187946 CATCTCCCACGACTGCCC 59.812 66.667 0.00 0.00 0.00 5.36
122 124 2.187946 CCATCTCCCACGACTGCC 59.812 66.667 0.00 0.00 0.00 4.85
123 125 2.187946 CCCATCTCCCACGACTGC 59.812 66.667 0.00 0.00 0.00 4.40
124 126 1.264749 TTCCCCATCTCCCACGACTG 61.265 60.000 0.00 0.00 0.00 3.51
125 127 1.080354 TTCCCCATCTCCCACGACT 59.920 57.895 0.00 0.00 0.00 4.18
126 128 1.221021 GTTCCCCATCTCCCACGAC 59.779 63.158 0.00 0.00 0.00 4.34
127 129 1.229368 TGTTCCCCATCTCCCACGA 60.229 57.895 0.00 0.00 0.00 4.35
128 130 1.221840 CTGTTCCCCATCTCCCACG 59.778 63.158 0.00 0.00 0.00 4.94
129 131 0.991920 TTCTGTTCCCCATCTCCCAC 59.008 55.000 0.00 0.00 0.00 4.61
130 132 1.289160 CTTCTGTTCCCCATCTCCCA 58.711 55.000 0.00 0.00 0.00 4.37
131 133 1.210722 GACTTCTGTTCCCCATCTCCC 59.789 57.143 0.00 0.00 0.00 4.30
132 134 1.134670 CGACTTCTGTTCCCCATCTCC 60.135 57.143 0.00 0.00 0.00 3.71
133 135 1.550976 ACGACTTCTGTTCCCCATCTC 59.449 52.381 0.00 0.00 0.00 2.75
134 136 1.276421 CACGACTTCTGTTCCCCATCT 59.724 52.381 0.00 0.00 0.00 2.90
135 137 1.726853 CACGACTTCTGTTCCCCATC 58.273 55.000 0.00 0.00 0.00 3.51
136 138 0.321653 GCACGACTTCTGTTCCCCAT 60.322 55.000 0.00 0.00 0.00 4.00
137 139 1.070786 GCACGACTTCTGTTCCCCA 59.929 57.895 0.00 0.00 0.00 4.96
138 140 2.027625 CGCACGACTTCTGTTCCCC 61.028 63.158 0.00 0.00 0.00 4.81
139 141 2.027625 CCGCACGACTTCTGTTCCC 61.028 63.158 0.00 0.00 0.00 3.97
140 142 2.027625 CCCGCACGACTTCTGTTCC 61.028 63.158 0.00 0.00 0.00 3.62
141 143 1.006571 TCCCGCACGACTTCTGTTC 60.007 57.895 0.00 0.00 0.00 3.18
142 144 1.300697 GTCCCGCACGACTTCTGTT 60.301 57.895 0.00 0.00 0.00 3.16
143 145 2.338984 GTCCCGCACGACTTCTGT 59.661 61.111 0.00 0.00 0.00 3.41
187 189 4.025401 GTTTGCGACTGGGGCGTG 62.025 66.667 0.00 0.00 0.00 5.34
199 201 0.179215 CTTCCGATGTCAGCGTTTGC 60.179 55.000 9.95 0.00 43.24 3.68
200 202 0.443869 CCTTCCGATGTCAGCGTTTG 59.556 55.000 9.95 0.00 0.00 2.93
201 203 0.320374 TCCTTCCGATGTCAGCGTTT 59.680 50.000 9.95 0.00 0.00 3.60
202 204 0.320374 TTCCTTCCGATGTCAGCGTT 59.680 50.000 9.95 0.00 0.00 4.84
203 205 0.320374 TTTCCTTCCGATGTCAGCGT 59.680 50.000 9.95 0.00 0.00 5.07
204 206 1.128692 GTTTTCCTTCCGATGTCAGCG 59.871 52.381 2.86 2.86 0.00 5.18
205 207 2.151202 TGTTTTCCTTCCGATGTCAGC 58.849 47.619 0.00 0.00 0.00 4.26
206 208 2.160417 GCTGTTTTCCTTCCGATGTCAG 59.840 50.000 0.00 0.00 0.00 3.51
207 209 2.151202 GCTGTTTTCCTTCCGATGTCA 58.849 47.619 0.00 0.00 0.00 3.58
208 210 1.128692 CGCTGTTTTCCTTCCGATGTC 59.871 52.381 0.00 0.00 0.00 3.06
209 211 1.156736 CGCTGTTTTCCTTCCGATGT 58.843 50.000 0.00 0.00 0.00 3.06
210 212 1.135972 CACGCTGTTTTCCTTCCGATG 60.136 52.381 0.00 0.00 0.00 3.84
211 213 1.156736 CACGCTGTTTTCCTTCCGAT 58.843 50.000 0.00 0.00 0.00 4.18
212 214 1.503818 GCACGCTGTTTTCCTTCCGA 61.504 55.000 0.00 0.00 0.00 4.55
213 215 1.082104 GCACGCTGTTTTCCTTCCG 60.082 57.895 0.00 0.00 0.00 4.30
214 216 1.082104 CGCACGCTGTTTTCCTTCC 60.082 57.895 0.00 0.00 0.00 3.46
215 217 1.082104 CCGCACGCTGTTTTCCTTC 60.082 57.895 0.00 0.00 0.00 3.46
216 218 2.551912 CCCGCACGCTGTTTTCCTT 61.552 57.895 0.00 0.00 0.00 3.36
217 219 2.978010 CCCGCACGCTGTTTTCCT 60.978 61.111 0.00 0.00 0.00 3.36
218 220 4.700365 GCCCGCACGCTGTTTTCC 62.700 66.667 0.00 0.00 0.00 3.13
233 235 2.109126 GCATGTGAGGGAGTTCGCC 61.109 63.158 0.00 0.00 0.00 5.54
234 236 2.109126 GGCATGTGAGGGAGTTCGC 61.109 63.158 0.00 0.00 0.00 4.70
235 237 1.021390 GTGGCATGTGAGGGAGTTCG 61.021 60.000 0.00 0.00 0.00 3.95
236 238 0.036732 TGTGGCATGTGAGGGAGTTC 59.963 55.000 0.00 0.00 0.00 3.01
237 239 0.250901 GTGTGGCATGTGAGGGAGTT 60.251 55.000 0.00 0.00 0.00 3.01
238 240 1.376466 GTGTGGCATGTGAGGGAGT 59.624 57.895 0.00 0.00 0.00 3.85
239 241 0.957395 GTGTGTGGCATGTGAGGGAG 60.957 60.000 0.00 0.00 0.00 4.30
240 242 1.073025 GTGTGTGGCATGTGAGGGA 59.927 57.895 0.00 0.00 0.00 4.20
241 243 2.327343 CGTGTGTGGCATGTGAGGG 61.327 63.158 0.00 0.00 0.00 4.30
242 244 2.969806 GCGTGTGTGGCATGTGAGG 61.970 63.158 0.00 0.00 36.50 3.86
243 245 2.557805 GCGTGTGTGGCATGTGAG 59.442 61.111 0.00 0.00 36.50 3.51
244 246 3.345011 CGCGTGTGTGGCATGTGA 61.345 61.111 0.00 0.00 44.96 3.58
245 247 3.299304 CTCGCGTGTGTGGCATGTG 62.299 63.158 5.77 0.00 43.87 3.21
246 248 3.043713 CTCGCGTGTGTGGCATGT 61.044 61.111 5.77 0.00 36.50 3.21
247 249 2.606961 AACTCGCGTGTGTGGCATG 61.607 57.895 15.31 0.00 37.17 4.06
248 250 2.280797 AACTCGCGTGTGTGGCAT 60.281 55.556 15.31 0.00 0.00 4.40
249 251 3.268603 CAACTCGCGTGTGTGGCA 61.269 61.111 15.31 0.00 0.00 4.92
250 252 3.223435 GACAACTCGCGTGTGTGGC 62.223 63.158 15.31 13.02 0.00 5.01
251 253 2.594962 GGACAACTCGCGTGTGTGG 61.595 63.158 15.31 10.05 0.00 4.17
252 254 0.318360 TAGGACAACTCGCGTGTGTG 60.318 55.000 15.31 15.98 0.00 3.82
253 255 0.318445 GTAGGACAACTCGCGTGTGT 60.318 55.000 15.31 14.20 0.00 3.72
254 256 1.334992 CGTAGGACAACTCGCGTGTG 61.335 60.000 15.31 11.22 0.00 3.82
255 257 1.081641 CGTAGGACAACTCGCGTGT 60.082 57.895 8.21 8.21 0.00 4.49
256 258 1.081641 ACGTAGGACAACTCGCGTG 60.082 57.895 5.77 6.24 38.75 5.34
257 259 1.081641 CACGTAGGACAACTCGCGT 60.082 57.895 5.77 0.00 40.11 6.01
258 260 1.800315 CCACGTAGGACAACTCGCG 60.800 63.158 0.00 0.00 41.22 5.87
259 261 2.092882 GCCACGTAGGACAACTCGC 61.093 63.158 8.04 0.00 41.22 5.03
260 262 1.007336 GTGCCACGTAGGACAACTCG 61.007 60.000 0.00 0.00 41.22 4.18
261 263 0.032952 TGTGCCACGTAGGACAACTC 59.967 55.000 5.76 0.00 41.22 3.01
262 264 0.249741 GTGTGCCACGTAGGACAACT 60.250 55.000 10.20 0.00 41.22 3.16
263 265 0.531090 TGTGTGCCACGTAGGACAAC 60.531 55.000 10.20 5.70 41.22 3.32
264 266 0.178301 TTGTGTGCCACGTAGGACAA 59.822 50.000 10.20 7.57 41.22 3.18
265 267 0.178301 TTTGTGTGCCACGTAGGACA 59.822 50.000 3.90 3.90 41.22 4.02
266 268 1.301423 TTTTGTGTGCCACGTAGGAC 58.699 50.000 0.00 0.00 41.22 3.85
267 269 2.147958 GATTTTGTGTGCCACGTAGGA 58.852 47.619 8.04 0.00 41.22 2.94
268 270 1.876799 TGATTTTGTGTGCCACGTAGG 59.123 47.619 0.00 0.00 37.14 3.18
269 271 2.665519 GCTGATTTTGTGTGCCACGTAG 60.666 50.000 0.00 0.00 37.14 3.51
270 272 1.265635 GCTGATTTTGTGTGCCACGTA 59.734 47.619 0.00 0.00 37.14 3.57
271 273 0.030638 GCTGATTTTGTGTGCCACGT 59.969 50.000 0.00 0.00 37.14 4.49
272 274 0.664166 GGCTGATTTTGTGTGCCACG 60.664 55.000 0.00 0.00 42.79 4.94
273 275 0.319813 GGGCTGATTTTGTGTGCCAC 60.320 55.000 0.00 0.00 44.85 5.01
274 276 0.469705 AGGGCTGATTTTGTGTGCCA 60.470 50.000 0.00 0.00 44.85 4.92
275 277 0.244721 GAGGGCTGATTTTGTGTGCC 59.755 55.000 0.00 0.00 42.56 5.01
276 278 1.200948 GAGAGGGCTGATTTTGTGTGC 59.799 52.381 0.00 0.00 0.00 4.57
277 279 1.466167 CGAGAGGGCTGATTTTGTGTG 59.534 52.381 0.00 0.00 0.00 3.82
278 280 1.072331 ACGAGAGGGCTGATTTTGTGT 59.928 47.619 0.00 0.00 0.00 3.72
279 281 1.466167 CACGAGAGGGCTGATTTTGTG 59.534 52.381 0.00 0.00 0.00 3.33
280 282 1.813513 CACGAGAGGGCTGATTTTGT 58.186 50.000 0.00 0.00 0.00 2.83
290 292 0.807667 CGAATCTTGGCACGAGAGGG 60.808 60.000 0.00 0.00 37.78 4.30
291 293 0.108615 ACGAATCTTGGCACGAGAGG 60.109 55.000 0.00 0.00 0.00 3.69
292 294 0.994995 CACGAATCTTGGCACGAGAG 59.005 55.000 0.00 0.00 0.00 3.20
293 295 1.014044 GCACGAATCTTGGCACGAGA 61.014 55.000 0.00 0.00 0.00 4.04
294 296 1.291184 TGCACGAATCTTGGCACGAG 61.291 55.000 0.00 0.00 0.00 4.18
295 297 0.882484 TTGCACGAATCTTGGCACGA 60.882 50.000 0.00 0.00 35.74 4.35
296 298 0.040514 TTTGCACGAATCTTGGCACG 60.041 50.000 0.00 0.00 35.74 5.34
297 299 2.053627 CTTTTGCACGAATCTTGGCAC 58.946 47.619 0.00 0.00 35.74 5.01
298 300 1.000385 CCTTTTGCACGAATCTTGGCA 60.000 47.619 0.00 0.00 0.00 4.92
299 301 1.000274 ACCTTTTGCACGAATCTTGGC 60.000 47.619 0.00 0.00 0.00 4.52
300 302 3.502211 AGTACCTTTTGCACGAATCTTGG 59.498 43.478 0.00 0.00 0.00 3.61
301 303 4.466828 CAGTACCTTTTGCACGAATCTTG 58.533 43.478 0.00 0.00 0.00 3.02
302 304 3.502211 CCAGTACCTTTTGCACGAATCTT 59.498 43.478 0.00 0.00 0.00 2.40
303 305 3.074412 CCAGTACCTTTTGCACGAATCT 58.926 45.455 0.00 0.00 0.00 2.40
304 306 3.071479 TCCAGTACCTTTTGCACGAATC 58.929 45.455 0.00 0.00 0.00 2.52
305 307 3.134574 TCCAGTACCTTTTGCACGAAT 57.865 42.857 0.00 0.00 0.00 3.34
306 308 2.623878 TCCAGTACCTTTTGCACGAA 57.376 45.000 0.00 0.00 0.00 3.85
307 309 2.422597 CATCCAGTACCTTTTGCACGA 58.577 47.619 0.00 0.00 0.00 4.35
308 310 1.468520 CCATCCAGTACCTTTTGCACG 59.531 52.381 0.00 0.00 0.00 5.34
309 311 2.228822 CACCATCCAGTACCTTTTGCAC 59.771 50.000 0.00 0.00 0.00 4.57
310 312 2.107378 TCACCATCCAGTACCTTTTGCA 59.893 45.455 0.00 0.00 0.00 4.08
311 313 2.790433 TCACCATCCAGTACCTTTTGC 58.210 47.619 0.00 0.00 0.00 3.68
312 314 3.623060 CGATCACCATCCAGTACCTTTTG 59.377 47.826 0.00 0.00 0.00 2.44
313 315 3.517901 TCGATCACCATCCAGTACCTTTT 59.482 43.478 0.00 0.00 0.00 2.27
314 316 3.104512 TCGATCACCATCCAGTACCTTT 58.895 45.455 0.00 0.00 0.00 3.11
315 317 2.695666 CTCGATCACCATCCAGTACCTT 59.304 50.000 0.00 0.00 0.00 3.50
316 318 2.311463 CTCGATCACCATCCAGTACCT 58.689 52.381 0.00 0.00 0.00 3.08
317 319 1.341531 CCTCGATCACCATCCAGTACC 59.658 57.143 0.00 0.00 0.00 3.34
318 320 1.269831 GCCTCGATCACCATCCAGTAC 60.270 57.143 0.00 0.00 0.00 2.73
319 321 1.040646 GCCTCGATCACCATCCAGTA 58.959 55.000 0.00 0.00 0.00 2.74
320 322 1.826024 GCCTCGATCACCATCCAGT 59.174 57.895 0.00 0.00 0.00 4.00
321 323 1.300465 CGCCTCGATCACCATCCAG 60.300 63.158 0.00 0.00 0.00 3.86
322 324 2.058001 ACGCCTCGATCACCATCCA 61.058 57.895 0.00 0.00 0.00 3.41
323 325 1.592669 CACGCCTCGATCACCATCC 60.593 63.158 0.00 0.00 0.00 3.51
324 326 1.141881 ACACGCCTCGATCACCATC 59.858 57.895 0.00 0.00 0.00 3.51
325 327 1.153568 CACACGCCTCGATCACCAT 60.154 57.895 0.00 0.00 0.00 3.55
326 328 2.261361 CACACGCCTCGATCACCA 59.739 61.111 0.00 0.00 0.00 4.17
327 329 2.509336 CCACACGCCTCGATCACC 60.509 66.667 0.00 0.00 0.00 4.02
328 330 2.509336 CCCACACGCCTCGATCAC 60.509 66.667 0.00 0.00 0.00 3.06
329 331 4.451150 GCCCACACGCCTCGATCA 62.451 66.667 0.00 0.00 0.00 2.92
334 336 4.681978 AACTCGCCCACACGCCTC 62.682 66.667 0.00 0.00 0.00 4.70
335 337 4.988598 CAACTCGCCCACACGCCT 62.989 66.667 0.00 0.00 0.00 5.52
338 340 3.583276 TAGCCAACTCGCCCACACG 62.583 63.158 0.00 0.00 0.00 4.49
339 341 1.302192 TTAGCCAACTCGCCCACAC 60.302 57.895 0.00 0.00 0.00 3.82
340 342 1.302192 GTTAGCCAACTCGCCCACA 60.302 57.895 0.00 0.00 0.00 4.17
341 343 2.388232 CGTTAGCCAACTCGCCCAC 61.388 63.158 0.00 0.00 32.09 4.61
342 344 2.047655 CGTTAGCCAACTCGCCCA 60.048 61.111 0.00 0.00 32.09 5.36
343 345 2.047560 ACGTTAGCCAACTCGCCC 60.048 61.111 0.00 0.00 32.09 6.13
344 346 2.098831 GGACGTTAGCCAACTCGCC 61.099 63.158 0.00 0.00 32.09 5.54
345 347 1.373748 TGGACGTTAGCCAACTCGC 60.374 57.895 0.00 0.00 31.13 5.03
346 348 0.319211 TGTGGACGTTAGCCAACTCG 60.319 55.000 0.00 0.00 37.12 4.18
347 349 1.145803 GTGTGGACGTTAGCCAACTC 58.854 55.000 0.00 0.00 37.12 3.01
348 350 0.599204 CGTGTGGACGTTAGCCAACT 60.599 55.000 0.00 0.00 40.91 3.16
349 351 1.857364 CGTGTGGACGTTAGCCAAC 59.143 57.895 0.00 0.00 40.91 3.77
350 352 4.347096 CGTGTGGACGTTAGCCAA 57.653 55.556 0.00 0.00 40.91 4.52
359 361 2.893404 ACGCCAACACGTGTGGAC 60.893 61.111 29.50 18.13 46.28 4.02
366 368 2.368685 GAAAACACTAACGCCAACACG 58.631 47.619 0.00 0.00 39.50 4.49
367 369 2.223089 ACGAAAACACTAACGCCAACAC 60.223 45.455 0.00 0.00 0.00 3.32
368 370 2.008329 ACGAAAACACTAACGCCAACA 58.992 42.857 0.00 0.00 0.00 3.33
369 371 2.742954 ACGAAAACACTAACGCCAAC 57.257 45.000 0.00 0.00 0.00 3.77
370 372 6.724694 ATATTACGAAAACACTAACGCCAA 57.275 33.333 0.00 0.00 0.00 4.52
371 373 6.724694 AATATTACGAAAACACTAACGCCA 57.275 33.333 0.00 0.00 0.00 5.69
372 374 7.339953 CCTAATATTACGAAAACACTAACGCC 58.660 38.462 0.00 0.00 0.00 5.68
373 375 7.339953 CCCTAATATTACGAAAACACTAACGC 58.660 38.462 0.00 0.00 0.00 4.84
374 376 7.339953 GCCCTAATATTACGAAAACACTAACG 58.660 38.462 0.00 0.00 0.00 3.18
375 377 7.496920 AGGCCCTAATATTACGAAAACACTAAC 59.503 37.037 0.00 0.00 0.00 2.34
376 378 7.496591 CAGGCCCTAATATTACGAAAACACTAA 59.503 37.037 0.00 0.00 0.00 2.24
377 379 6.987992 CAGGCCCTAATATTACGAAAACACTA 59.012 38.462 0.00 0.00 0.00 2.74
378 380 5.820947 CAGGCCCTAATATTACGAAAACACT 59.179 40.000 0.00 0.00 0.00 3.55
379 381 5.818857 TCAGGCCCTAATATTACGAAAACAC 59.181 40.000 0.00 0.00 0.00 3.32
380 382 5.818857 GTCAGGCCCTAATATTACGAAAACA 59.181 40.000 0.00 0.00 0.00 2.83
381 383 5.237996 GGTCAGGCCCTAATATTACGAAAAC 59.762 44.000 0.00 0.00 0.00 2.43
382 384 5.104444 TGGTCAGGCCCTAATATTACGAAAA 60.104 40.000 0.00 0.00 36.04 2.29
383 385 4.409574 TGGTCAGGCCCTAATATTACGAAA 59.590 41.667 0.00 0.00 36.04 3.46
384 386 3.968649 TGGTCAGGCCCTAATATTACGAA 59.031 43.478 0.00 0.00 36.04 3.85
385 387 3.578978 TGGTCAGGCCCTAATATTACGA 58.421 45.455 0.00 0.00 36.04 3.43
386 388 4.020573 TGATGGTCAGGCCCTAATATTACG 60.021 45.833 0.00 0.00 36.04 3.18
387 389 5.499004 TGATGGTCAGGCCCTAATATTAC 57.501 43.478 0.00 0.00 36.04 1.89
388 390 6.523035 TTTGATGGTCAGGCCCTAATATTA 57.477 37.500 0.00 0.00 36.04 0.98
389 391 5.402054 TTTGATGGTCAGGCCCTAATATT 57.598 39.130 0.00 0.00 36.04 1.28
390 392 5.605540 ATTTGATGGTCAGGCCCTAATAT 57.394 39.130 0.00 0.00 36.04 1.28
391 393 5.402054 AATTTGATGGTCAGGCCCTAATA 57.598 39.130 0.00 0.00 36.04 0.98
392 394 3.979501 ATTTGATGGTCAGGCCCTAAT 57.020 42.857 0.00 0.00 36.04 1.73
393 395 3.756082 AATTTGATGGTCAGGCCCTAA 57.244 42.857 0.00 0.00 36.04 2.69
394 396 3.756082 AAATTTGATGGTCAGGCCCTA 57.244 42.857 0.00 0.00 36.04 3.53
395 397 2.629017 AAATTTGATGGTCAGGCCCT 57.371 45.000 0.00 0.00 36.04 5.19
396 398 2.833943 AGAAAATTTGATGGTCAGGCCC 59.166 45.455 0.00 0.00 36.04 5.80
397 399 4.541973 AAGAAAATTTGATGGTCAGGCC 57.458 40.909 0.00 0.00 37.90 5.19
398 400 4.622740 CGAAAGAAAATTTGATGGTCAGGC 59.377 41.667 0.00 0.00 0.00 4.85
399 401 5.772521 ACGAAAGAAAATTTGATGGTCAGG 58.227 37.500 0.00 0.00 0.00 3.86
400 402 6.672147 AGACGAAAGAAAATTTGATGGTCAG 58.328 36.000 0.00 0.00 0.00 3.51
401 403 6.633500 AGACGAAAGAAAATTTGATGGTCA 57.367 33.333 0.00 0.00 0.00 4.02
402 404 7.930513 AAAGACGAAAGAAAATTTGATGGTC 57.069 32.000 0.00 0.00 0.00 4.02
403 405 8.716646 AAAAAGACGAAAGAAAATTTGATGGT 57.283 26.923 0.00 0.00 0.00 3.55
428 430 6.100668 ACGAAAGAAAATTTCCCGTCAAAAA 58.899 32.000 10.86 0.00 0.00 1.94
429 431 5.652518 ACGAAAGAAAATTTCCCGTCAAAA 58.347 33.333 10.86 0.00 0.00 2.44
430 432 5.066764 AGACGAAAGAAAATTTCCCGTCAAA 59.933 36.000 28.93 0.00 43.46 2.69
431 433 4.577283 AGACGAAAGAAAATTTCCCGTCAA 59.423 37.500 28.93 0.00 43.46 3.18
432 434 4.131596 AGACGAAAGAAAATTTCCCGTCA 58.868 39.130 28.93 0.00 43.46 4.35
433 435 4.744136 AGACGAAAGAAAATTTCCCGTC 57.256 40.909 24.48 24.48 42.44 4.79
434 436 5.163591 ACAAAGACGAAAGAAAATTTCCCGT 60.164 36.000 14.71 14.71 34.86 5.28
435 437 5.173131 CACAAAGACGAAAGAAAATTTCCCG 59.827 40.000 1.57 6.66 0.00 5.14
436 438 6.270064 TCACAAAGACGAAAGAAAATTTCCC 58.730 36.000 1.57 0.00 0.00 3.97
437 439 7.749539 TTCACAAAGACGAAAGAAAATTTCC 57.250 32.000 1.57 0.00 0.00 3.13
438 440 7.834591 CGTTTCACAAAGACGAAAGAAAATTTC 59.165 33.333 0.00 0.00 38.99 2.17
439 441 7.327518 ACGTTTCACAAAGACGAAAGAAAATTT 59.672 29.630 1.90 0.00 39.85 1.82
440 442 6.804783 ACGTTTCACAAAGACGAAAGAAAATT 59.195 30.769 1.90 0.00 39.85 1.82
441 443 6.319399 ACGTTTCACAAAGACGAAAGAAAAT 58.681 32.000 1.90 0.00 39.85 1.82
442 444 5.691815 ACGTTTCACAAAGACGAAAGAAAA 58.308 33.333 1.90 0.00 39.85 2.29
443 445 5.285798 ACGTTTCACAAAGACGAAAGAAA 57.714 34.783 1.90 0.00 39.85 2.52
444 446 4.932268 ACGTTTCACAAAGACGAAAGAA 57.068 36.364 1.90 0.00 39.85 2.52
445 447 4.152759 ACAACGTTTCACAAAGACGAAAGA 59.847 37.500 0.00 0.00 39.85 2.52
446 448 4.259734 CACAACGTTTCACAAAGACGAAAG 59.740 41.667 0.00 0.00 39.85 2.62
447 449 4.083961 TCACAACGTTTCACAAAGACGAAA 60.084 37.500 0.00 0.00 39.85 3.46
448 450 3.432592 TCACAACGTTTCACAAAGACGAA 59.567 39.130 0.00 0.00 39.85 3.85
449 451 2.994578 TCACAACGTTTCACAAAGACGA 59.005 40.909 0.00 0.00 39.85 4.20
450 452 3.088552 GTCACAACGTTTCACAAAGACG 58.911 45.455 0.00 0.00 42.13 4.18
451 453 3.088552 CGTCACAACGTTTCACAAAGAC 58.911 45.455 0.00 0.00 43.94 3.01
452 454 3.377434 CGTCACAACGTTTCACAAAGA 57.623 42.857 0.00 0.00 43.94 2.52
500 825 4.778143 GGCGTTCGGGAGGTGCAT 62.778 66.667 0.00 0.00 0.00 3.96
867 1193 0.691413 GGTTAGGTGGAGGGAGGGAG 60.691 65.000 0.00 0.00 0.00 4.30
868 1194 1.160289 AGGTTAGGTGGAGGGAGGGA 61.160 60.000 0.00 0.00 0.00 4.20
869 1195 0.640495 TAGGTTAGGTGGAGGGAGGG 59.360 60.000 0.00 0.00 0.00 4.30
870 1196 2.117051 GTTAGGTTAGGTGGAGGGAGG 58.883 57.143 0.00 0.00 0.00 4.30
871 1197 1.755380 CGTTAGGTTAGGTGGAGGGAG 59.245 57.143 0.00 0.00 0.00 4.30
872 1198 1.077663 ACGTTAGGTTAGGTGGAGGGA 59.922 52.381 0.00 0.00 0.00 4.20
873 1199 1.479730 GACGTTAGGTTAGGTGGAGGG 59.520 57.143 0.00 0.00 0.00 4.30
874 1200 1.479730 GGACGTTAGGTTAGGTGGAGG 59.520 57.143 0.00 0.00 0.00 4.30
875 1201 2.094338 GTGGACGTTAGGTTAGGTGGAG 60.094 54.545 0.00 0.00 0.00 3.86
876 1202 1.895131 GTGGACGTTAGGTTAGGTGGA 59.105 52.381 0.00 0.00 0.00 4.02
877 1203 1.066645 GGTGGACGTTAGGTTAGGTGG 60.067 57.143 0.00 0.00 0.00 4.61
878 1204 1.897802 AGGTGGACGTTAGGTTAGGTG 59.102 52.381 0.00 0.00 0.00 4.00
892 1218 1.179152 TTGACGAGCGATTAGGTGGA 58.821 50.000 0.00 0.00 0.00 4.02
933 1259 2.760477 CAAATCGGTCCACCCCCA 59.240 61.111 0.00 0.00 0.00 4.96
952 1279 3.648067 TGCAGAGAGAGAAGAAAAGGGAA 59.352 43.478 0.00 0.00 0.00 3.97
956 1283 4.497300 CTCCTGCAGAGAGAGAAGAAAAG 58.503 47.826 17.39 0.00 46.50 2.27
972 1299 2.812619 CGATTCCCTCCCCTCCTGC 61.813 68.421 0.00 0.00 0.00 4.85
973 1300 1.075226 TCGATTCCCTCCCCTCCTG 60.075 63.158 0.00 0.00 0.00 3.86
974 1301 1.234529 CTCGATTCCCTCCCCTCCT 59.765 63.158 0.00 0.00 0.00 3.69
975 1302 1.839296 CCTCGATTCCCTCCCCTCC 60.839 68.421 0.00 0.00 0.00 4.30
2940 8428 6.070653 TGTTCTGTATTACCGTATTCAACCCT 60.071 38.462 0.00 0.00 0.00 4.34
3012 8500 2.294233 GCTTCTTTGGCACATCTTGACA 59.706 45.455 0.00 0.00 43.86 3.58
3150 9984 2.666022 CACGTGCACTGATATCGAAACA 59.334 45.455 16.19 0.00 0.00 2.83
3451 10291 8.603242 ATTATTATCCGGCTAGTTTACAACAG 57.397 34.615 0.00 0.00 0.00 3.16
3526 10366 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
3805 13206 6.098409 TGGATATCTTGTTGGTCTTCTAGGTC 59.902 42.308 2.05 0.00 0.00 3.85
3806 13207 5.964477 TGGATATCTTGTTGGTCTTCTAGGT 59.036 40.000 2.05 0.00 0.00 3.08
3807 13208 6.485830 TGGATATCTTGTTGGTCTTCTAGG 57.514 41.667 2.05 0.00 0.00 3.02
3828 13229 4.082125 AGTTGTTAGCATCTTCCCTTTGG 58.918 43.478 0.00 0.00 0.00 3.28
4039 14212 4.984194 TGCCACTGCAACAGAAGT 57.016 50.000 0.78 0.00 46.66 3.01
4054 14227 4.317671 TCGGTCTAACTAATTAGGCTGC 57.682 45.455 16.73 0.00 45.47 5.25
4127 14300 2.634600 AGTCAAACGCCTGTTGTAACA 58.365 42.857 0.00 0.00 38.62 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.