Multiple sequence alignment - TraesCS6D01G178200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G178200 chr6D 100.000 7508 0 0 1 7508 185193679 185186172 0.000000e+00 13865.0
1 TraesCS6D01G178200 chr6D 82.127 912 82 45 4675 5550 28321619 28320753 0.000000e+00 706.0
2 TraesCS6D01G178200 chr6D 88.632 475 37 7 2560 3023 28324364 28323896 5.090000e-156 562.0
3 TraesCS6D01G178200 chr6D 81.523 709 51 25 5643 6328 28320738 28320087 1.870000e-140 510.0
4 TraesCS6D01G178200 chr6D 88.406 414 33 7 3978 4376 28322285 28321872 1.130000e-132 484.0
5 TraesCS6D01G178200 chr6D 85.682 440 37 13 3161 3592 28323765 28323344 2.490000e-119 440.0
6 TraesCS6D01G178200 chr6D 97.701 87 2 0 3591 3677 309072504 309072590 4.690000e-32 150.0
7 TraesCS6D01G178200 chr6D 93.617 94 6 0 3584 3677 340997481 340997388 2.820000e-29 141.0
8 TraesCS6D01G178200 chr6D 89.899 99 9 1 3058 3156 28323896 28323799 7.910000e-25 126.0
9 TraesCS6D01G178200 chr6D 95.556 45 2 0 6904 6948 291382708 291382752 1.040000e-08 73.1
10 TraesCS6D01G178200 chr6A 96.319 2988 64 11 3922 6904 249160195 249157249 0.000000e+00 4867.0
11 TraesCS6D01G178200 chr6A 97.218 1977 41 4 1620 3592 249162497 249160531 0.000000e+00 3334.0
12 TraesCS6D01G178200 chr6A 96.071 1247 46 2 2348 3592 249324200 249322955 0.000000e+00 2028.0
13 TraesCS6D01G178200 chr6A 96.828 725 17 3 818 1539 249163308 249162587 0.000000e+00 1206.0
14 TraesCS6D01G178200 chr6A 90.574 732 57 5 1 732 249164036 249163317 0.000000e+00 959.0
15 TraesCS6D01G178200 chr6A 82.585 913 77 42 4675 5550 29566485 29567352 0.000000e+00 730.0
16 TraesCS6D01G178200 chr6A 82.807 791 76 29 5643 6426 29567367 29568104 0.000000e+00 652.0
17 TraesCS6D01G178200 chr6A 89.487 409 41 2 1 408 249358033 249357626 4.020000e-142 516.0
18 TraesCS6D01G178200 chr6A 85.000 440 42 19 3161 3592 29565165 29565588 6.960000e-115 425.0
19 TraesCS6D01G178200 chr6A 93.385 257 12 3 3673 3924 249160533 249160277 7.110000e-100 375.0
20 TraesCS6D01G178200 chr6A 95.671 231 9 1 6987 7216 249157124 249156894 3.310000e-98 370.0
21 TraesCS6D01G178200 chr6A 88.325 197 18 5 1578 1770 273584245 273584440 1.630000e-56 231.0
22 TraesCS6D01G178200 chr6A 79.412 170 15 12 4475 4644 29566335 29566484 1.330000e-17 102.0
23 TraesCS6D01G178200 chr6A 88.525 61 2 2 7269 7326 249156538 249156480 1.350000e-07 69.4
24 TraesCS6D01G178200 chr6A 93.333 45 3 0 6904 6948 141847980 141848024 4.860000e-07 67.6
25 TraesCS6D01G178200 chr6A 93.333 45 3 0 6904 6948 249157234 249157190 4.860000e-07 67.6
26 TraesCS6D01G178200 chr6B 92.445 3256 163 40 3673 6864 297303045 297299809 0.000000e+00 4573.0
27 TraesCS6D01G178200 chr6B 90.841 1856 99 32 1797 3592 297304887 297303043 0.000000e+00 2420.0
28 TraesCS6D01G178200 chr6B 96.392 693 25 0 846 1538 297305675 297304983 0.000000e+00 1142.0
29 TraesCS6D01G178200 chr6B 84.684 790 70 19 5643 6426 52364516 52363772 0.000000e+00 741.0
30 TraesCS6D01G178200 chr6B 80.197 1116 95 62 4475 5550 52365560 52364531 0.000000e+00 721.0
31 TraesCS6D01G178200 chr6B 88.632 475 35 8 2562 3023 52367291 52366823 1.830000e-155 560.0
32 TraesCS6D01G178200 chr6B 88.462 416 36 6 3973 4376 52366059 52365644 6.770000e-135 492.0
33 TraesCS6D01G178200 chr6B 88.889 99 10 1 3058 3156 52366823 52366726 3.680000e-23 121.0
34 TraesCS6D01G178200 chr1A 87.404 1040 90 21 2010 3022 538672285 538673310 0.000000e+00 1157.0
35 TraesCS6D01G178200 chr1A 88.028 142 14 1 1789 1927 538672121 538672262 1.680000e-36 165.0
36 TraesCS6D01G178200 chr1A 96.629 89 3 0 7022 7110 477048736 477048824 1.690000e-31 148.0
37 TraesCS6D01G178200 chr5D 86.447 1033 93 29 2010 3024 441584147 441583144 0.000000e+00 1088.0
38 TraesCS6D01G178200 chr5D 86.429 1039 82 25 2010 3023 490449695 490448691 0.000000e+00 1083.0
39 TraesCS6D01G178200 chr5D 87.013 847 83 12 5620 6456 441580791 441579962 0.000000e+00 929.0
40 TraesCS6D01G178200 chr5D 80.521 1268 141 60 3981 5202 490447866 490446659 0.000000e+00 876.0
41 TraesCS6D01G178200 chr5D 81.622 1110 94 53 4475 5550 441581830 441580797 0.000000e+00 819.0
42 TraesCS6D01G178200 chr5D 88.264 409 35 7 3981 4376 441582324 441581916 1.900000e-130 477.0
43 TraesCS6D01G178200 chr5D 86.395 441 35 11 3161 3592 441583013 441582589 6.870000e-125 459.0
44 TraesCS6D01G178200 chr5D 85.973 442 36 12 3161 3592 490448560 490448135 4.130000e-122 449.0
45 TraesCS6D01G178200 chr5D 96.154 182 4 1 1583 1761 443898133 443898314 2.050000e-75 294.0
46 TraesCS6D01G178200 chr5D 85.448 268 24 14 3673 3927 490448137 490447872 1.610000e-66 265.0
47 TraesCS6D01G178200 chr5D 96.591 88 3 0 3591 3678 431293823 431293736 6.070000e-31 147.0
48 TraesCS6D01G178200 chr5D 90.789 76 7 0 739 814 55535347 55535272 1.330000e-17 102.0
49 TraesCS6D01G178200 chr2B 86.547 892 85 19 5610 6490 733153320 733154187 0.000000e+00 950.0
50 TraesCS6D01G178200 chr2B 87.622 614 48 15 2030 2621 733149830 733150437 0.000000e+00 688.0
51 TraesCS6D01G178200 chr2B 88.780 410 35 5 3973 4371 733151690 733152099 6.770000e-135 492.0
52 TraesCS6D01G178200 chr2B 85.950 363 34 7 2672 3023 733150432 733150788 9.200000e-99 372.0
53 TraesCS6D01G178200 chr2B 90.278 288 21 4 5105 5390 733152921 733153203 3.310000e-98 370.0
54 TraesCS6D01G178200 chr2B 91.810 232 17 1 3361 3592 733151200 733151429 9.400000e-84 322.0
55 TraesCS6D01G178200 chr2B 94.118 102 4 2 3592 3692 245689854 245689954 3.630000e-33 154.0
56 TraesCS6D01G178200 chr2B 90.588 85 8 0 730 814 493642847 493642931 6.160000e-21 113.0
57 TraesCS6D01G178200 chr2B 89.286 84 9 0 730 813 775395984 775396067 1.030000e-18 106.0
58 TraesCS6D01G178200 chr7D 83.429 1044 110 19 5620 6655 44728013 44727025 0.000000e+00 911.0
59 TraesCS6D01G178200 chr7D 80.957 1108 106 50 4475 5550 44729053 44728019 0.000000e+00 780.0
60 TraesCS6D01G178200 chr7D 85.929 732 52 23 2315 3023 44731158 44730455 0.000000e+00 734.0
61 TraesCS6D01G178200 chr7D 91.810 232 17 1 3361 3592 44730048 44729819 9.400000e-84 322.0
62 TraesCS6D01G178200 chr7D 95.580 181 6 1 1581 1761 75800671 75800849 9.530000e-74 289.0
63 TraesCS6D01G178200 chr7D 85.448 268 25 13 3673 3927 44729821 44729555 4.470000e-67 267.0
64 TraesCS6D01G178200 chr7D 88.276 145 14 1 1779 1920 44735018 44734874 3.600000e-38 171.0
65 TraesCS6D01G178200 chrUn 85.097 879 80 19 2014 2873 991311 990465 0.000000e+00 850.0
66 TraesCS6D01G178200 chrUn 93.333 45 3 0 6904 6948 236704440 236704396 4.860000e-07 67.6
67 TraesCS6D01G178200 chrUn 100.000 28 0 0 4287 4314 35791357 35791384 1.400000e-02 52.8
68 TraesCS6D01G178200 chrUn 100.000 28 0 0 4287 4314 38466491 38466518 1.400000e-02 52.8
69 TraesCS6D01G178200 chrUn 100.000 28 0 0 4287 4314 39689913 39689940 1.400000e-02 52.8
70 TraesCS6D01G178200 chrUn 100.000 28 0 0 4287 4314 88791306 88791279 1.400000e-02 52.8
71 TraesCS6D01G178200 chr4A 88.429 700 51 13 2116 2792 679683135 679682443 0.000000e+00 817.0
72 TraesCS6D01G178200 chr4A 86.853 715 66 18 3683 4376 15933532 15932825 0.000000e+00 774.0
73 TraesCS6D01G178200 chr4A 85.216 717 73 23 3683 4376 682744327 682745033 0.000000e+00 706.0
74 TraesCS6D01G178200 chr4A 88.732 426 35 7 2010 2432 682743909 682744324 6.720000e-140 508.0
75 TraesCS6D01G178200 chr4A 81.860 215 24 5 174 387 162161829 162162029 4.660000e-37 167.0
76 TraesCS6D01G178200 chr4A 92.941 85 6 0 1843 1927 679683386 679683302 2.840000e-24 124.0
77 TraesCS6D01G178200 chr3D 86.648 719 63 25 3683 4376 562546989 562547699 0.000000e+00 765.0
78 TraesCS6D01G178200 chr3D 94.054 185 8 3 1581 1762 615079827 615080011 2.060000e-70 278.0
79 TraesCS6D01G178200 chr3D 96.591 88 3 0 3591 3678 384726625 384726712 6.070000e-31 147.0
80 TraesCS6D01G178200 chr3D 89.024 82 9 0 733 814 296034496 296034415 1.330000e-17 102.0
81 TraesCS6D01G178200 chr4D 86.453 716 66 22 3683 4376 451030073 451030779 0.000000e+00 756.0
82 TraesCS6D01G178200 chr4D 92.381 105 6 2 3582 3684 492239321 492239217 1.690000e-31 148.0
83 TraesCS6D01G178200 chr4D 95.294 85 3 1 1843 1927 472691200 472691117 4.730000e-27 134.0
84 TraesCS6D01G178200 chr4D 100.000 29 0 0 4286 4314 196905245 196905273 4.000000e-03 54.7
85 TraesCS6D01G178200 chr4B 86.460 709 62 25 3687 4376 564143786 564144479 0.000000e+00 747.0
86 TraesCS6D01G178200 chr4B 86.420 81 11 0 733 813 119340232 119340152 1.040000e-13 89.8
87 TraesCS6D01G178200 chr4B 93.333 45 3 0 6904 6948 658175607 658175563 4.860000e-07 67.6
88 TraesCS6D01G178200 chr4B 100.000 29 0 0 4287 4315 644595894 644595922 4.000000e-03 54.7
89 TraesCS6D01G178200 chr5B 88.268 537 44 10 2030 2553 604878267 604877737 6.400000e-175 625.0
90 TraesCS6D01G178200 chr5B 88.591 447 31 13 5610 6048 604860946 604861380 6.670000e-145 525.0
91 TraesCS6D01G178200 chr5B 81.611 571 51 25 3058 3592 604877317 604876765 2.500000e-114 424.0
92 TraesCS6D01G178200 chr5B 93.333 45 3 0 6904 6948 522874736 522874780 4.860000e-07 67.6
93 TraesCS6D01G178200 chr2A 85.563 568 58 13 5610 6167 743331203 743331756 2.350000e-159 573.0
94 TraesCS6D01G178200 chr2A 86.971 307 28 8 5085 5390 743330791 743331086 1.210000e-87 335.0
95 TraesCS6D01G178200 chr2A 88.776 196 17 3 1577 1768 196517961 196518155 1.260000e-57 235.0
96 TraesCS6D01G178200 chr2A 88.718 195 16 4 1580 1769 278996256 278996449 4.530000e-57 233.0
97 TraesCS6D01G178200 chr2A 85.294 170 23 2 4475 4644 743330374 743330541 2.780000e-39 174.0
98 TraesCS6D01G178200 chr2A 89.286 140 11 2 1762 1898 743329950 743330088 1.000000e-38 172.0
99 TraesCS6D01G178200 chr2A 96.552 87 3 0 3590 3676 498099528 498099442 2.180000e-30 145.0
100 TraesCS6D01G178200 chr2A 88.095 84 10 0 730 813 710755064 710755147 4.790000e-17 100.0
101 TraesCS6D01G178200 chr7A 84.496 387 48 5 6025 6406 47305972 47305593 9.200000e-99 372.0
102 TraesCS6D01G178200 chr1D 93.567 171 11 0 1587 1757 466122252 466122422 9.670000e-64 255.0
103 TraesCS6D01G178200 chr1D 89.172 157 14 1 1777 1930 439799706 439799550 7.690000e-45 193.0
104 TraesCS6D01G178200 chr1D 81.308 214 21 9 7022 7218 436971142 436970931 1.010000e-33 156.0
105 TraesCS6D01G178200 chr1D 97.674 86 2 0 3591 3676 252473146 252473231 1.690000e-31 148.0
106 TraesCS6D01G178200 chr1D 96.629 89 2 1 3591 3678 295954216 295954304 6.070000e-31 147.0
107 TraesCS6D01G178200 chr1D 84.892 139 16 5 7371 7508 376867119 376867253 1.310000e-27 135.0
108 TraesCS6D01G178200 chr1D 85.263 95 13 1 723 817 275947616 275947709 6.200000e-16 97.1
109 TraesCS6D01G178200 chr1D 100.000 29 0 0 4286 4314 348146955 348146927 4.000000e-03 54.7
110 TraesCS6D01G178200 chr5A 87.255 204 18 8 1578 1775 291594555 291594756 7.580000e-55 226.0
111 TraesCS6D01G178200 chr3A 86.905 84 11 0 730 813 692469279 692469362 2.230000e-15 95.3
112 TraesCS6D01G178200 chr3A 87.342 79 10 0 735 813 692055436 692055358 2.880000e-14 91.6
113 TraesCS6D01G178200 chr7B 95.556 45 2 0 6904 6948 707827081 707827037 1.040000e-08 73.1
114 TraesCS6D01G178200 chr3B 95.556 45 2 0 6904 6948 822815609 822815653 1.040000e-08 73.1
115 TraesCS6D01G178200 chr3B 93.333 45 3 0 6904 6948 29858234 29858278 4.860000e-07 67.6
116 TraesCS6D01G178200 chr3B 100.000 30 0 0 4376 4405 109965280 109965309 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G178200 chr6D 185186172 185193679 7507 True 13865.000000 13865 100.000000 1 7508 1 chr6D.!!$R1 7507
1 TraesCS6D01G178200 chr6D 28320087 28324364 4277 True 471.333333 706 86.044833 2560 6328 6 chr6D.!!$R3 3768
2 TraesCS6D01G178200 chr6A 249322955 249324200 1245 True 2028.000000 2028 96.071000 2348 3592 1 chr6A.!!$R1 1244
3 TraesCS6D01G178200 chr6A 249156480 249164036 7556 True 1406.000000 4867 93.981625 1 7326 8 chr6A.!!$R3 7325
4 TraesCS6D01G178200 chr6A 29565165 29568104 2939 False 477.250000 730 82.451000 3161 6426 4 chr6A.!!$F3 3265
5 TraesCS6D01G178200 chr6B 297299809 297305675 5866 True 2711.666667 4573 93.226000 846 6864 3 chr6B.!!$R2 6018
6 TraesCS6D01G178200 chr6B 52363772 52367291 3519 True 527.000000 741 86.172800 2562 6426 5 chr6B.!!$R1 3864
7 TraesCS6D01G178200 chr1A 538672121 538673310 1189 False 661.000000 1157 87.716000 1789 3022 2 chr1A.!!$F2 1233
8 TraesCS6D01G178200 chr5D 441579962 441584147 4185 True 754.400000 1088 85.948200 2010 6456 5 chr5D.!!$R3 4446
9 TraesCS6D01G178200 chr5D 490446659 490449695 3036 True 668.250000 1083 84.592750 2010 5202 4 chr5D.!!$R4 3192
10 TraesCS6D01G178200 chr2B 733149830 733154187 4357 False 532.333333 950 88.497833 2030 6490 6 chr2B.!!$F4 4460
11 TraesCS6D01G178200 chr7D 44727025 44735018 7993 True 530.833333 911 85.974833 1779 6655 6 chr7D.!!$R1 4876
12 TraesCS6D01G178200 chrUn 990465 991311 846 True 850.000000 850 85.097000 2014 2873 1 chrUn.!!$R1 859
13 TraesCS6D01G178200 chr4A 15932825 15933532 707 True 774.000000 774 86.853000 3683 4376 1 chr4A.!!$R1 693
14 TraesCS6D01G178200 chr4A 682743909 682745033 1124 False 607.000000 706 86.974000 2010 4376 2 chr4A.!!$F2 2366
15 TraesCS6D01G178200 chr4A 679682443 679683386 943 True 470.500000 817 90.685000 1843 2792 2 chr4A.!!$R2 949
16 TraesCS6D01G178200 chr3D 562546989 562547699 710 False 765.000000 765 86.648000 3683 4376 1 chr3D.!!$F2 693
17 TraesCS6D01G178200 chr4D 451030073 451030779 706 False 756.000000 756 86.453000 3683 4376 1 chr4D.!!$F2 693
18 TraesCS6D01G178200 chr4B 564143786 564144479 693 False 747.000000 747 86.460000 3687 4376 1 chr4B.!!$F1 689
19 TraesCS6D01G178200 chr5B 604876765 604878267 1502 True 524.500000 625 84.939500 2030 3592 2 chr5B.!!$R1 1562
20 TraesCS6D01G178200 chr2A 743329950 743331756 1806 False 313.500000 573 86.778500 1762 6167 4 chr2A.!!$F4 4405

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.255318 AGAAATGCAGCAGAGGAGGG 59.745 55.0 0.00 0.00 0.00 4.30 F
1589 1662 0.323629 TCTCCGAATTGGGTGTGTCC 59.676 55.0 6.37 0.00 38.76 4.02 F
1601 1674 0.613260 GTGTGTCCAGGGCACATCTA 59.387 55.0 29.60 3.72 46.66 1.98 F
1602 1675 0.904649 TGTGTCCAGGGCACATCTAG 59.095 55.0 23.73 0.00 41.32 2.43 F
2063 2148 1.186200 TTGTCTATCGGCACAGAGCT 58.814 50.0 0.00 0.00 44.79 4.09 F
3606 7338 0.042131 TGTTACTCCCTCCGTCCCAT 59.958 55.0 0.00 0.00 0.00 4.00 F
4256 8957 1.030457 CAATCAATCCTGGAGCCAGC 58.970 55.0 11.07 0.00 42.35 4.85 F
5421 10613 0.687757 ATTCTCAGCAGGGCTACCGA 60.688 55.0 0.00 0.00 43.47 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1940 2019 2.416836 CGGACATGGCTCTTACGAAAGA 60.417 50.000 0.00 0.00 39.47 2.52 R
3307 6941 1.079503 GCAGGTGTGAACGGAGAATC 58.920 55.000 0.00 0.00 0.00 2.52 R
3315 6949 1.808945 CAAGGAGATGCAGGTGTGAAC 59.191 52.381 0.00 0.00 0.00 3.18 R
3597 7329 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69 R
3869 7617 0.321919 TGCTGCTCCATGACCAACTC 60.322 55.000 0.00 0.00 0.00 3.01 R
5298 10485 1.270571 TGTACCATGCAGCAGAACGAA 60.271 47.619 0.00 0.00 0.00 3.85 R
6224 11469 0.184451 CCCATAACCAGCCTGAGCAT 59.816 55.000 0.00 0.00 43.56 3.79 R
7353 12997 0.108424 GAACCGCATCTCAGCTGAGT 60.108 55.000 36.32 23.73 42.60 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.379642 GCCCTCGGGAAGAAATGCAG 61.380 60.000 6.08 0.00 37.50 4.41
32 33 1.101331 GGGAAGAAATGCAGCAGAGG 58.899 55.000 0.00 0.00 0.00 3.69
36 37 0.255318 AGAAATGCAGCAGAGGAGGG 59.745 55.000 0.00 0.00 0.00 4.30
97 98 2.705154 GAAAAATCGGCGGAGAAATCG 58.295 47.619 7.21 0.00 0.00 3.34
105 106 1.878522 CGGAGAAATCGACGGGCTG 60.879 63.158 0.00 0.00 0.00 4.85
122 123 3.112709 GAAGCTGTCGACGTGCCC 61.113 66.667 23.55 15.07 0.00 5.36
320 321 4.436998 GGCCACTGGAGGTCGTCG 62.437 72.222 0.00 0.00 0.00 5.12
373 374 2.813908 GTCGCCGATTTGGACGCT 60.814 61.111 0.00 0.00 42.00 5.07
394 395 2.093106 GACGGAGAAGAGAACCTAGCA 58.907 52.381 0.00 0.00 0.00 3.49
472 473 3.402681 CCCTGCACGTCCCCATCT 61.403 66.667 0.00 0.00 0.00 2.90
475 476 2.994995 TGCACGTCCCCATCTCGT 60.995 61.111 0.00 0.00 38.34 4.18
477 478 2.711922 GCACGTCCCCATCTCGTCT 61.712 63.158 0.00 0.00 35.62 4.18
481 482 2.038813 TCCCCATCTCGTCTGCCA 59.961 61.111 0.00 0.00 0.00 4.92
520 521 2.003301 GATCGCACCTCCTCTGTTTTC 58.997 52.381 0.00 0.00 0.00 2.29
522 523 1.000955 TCGCACCTCCTCTGTTTTCTC 59.999 52.381 0.00 0.00 0.00 2.87
524 525 2.694213 GCACCTCCTCTGTTTTCTCTC 58.306 52.381 0.00 0.00 0.00 3.20
556 557 3.068732 TGTGTGTTGAGAAGAGAGTGGAG 59.931 47.826 0.00 0.00 0.00 3.86
559 560 2.554462 TGTTGAGAAGAGAGTGGAGACG 59.446 50.000 0.00 0.00 0.00 4.18
575 576 2.282180 CGAAGTGGGGGTGGGTTG 60.282 66.667 0.00 0.00 0.00 3.77
576 577 2.117423 GAAGTGGGGGTGGGTTGG 59.883 66.667 0.00 0.00 0.00 3.77
577 578 2.702253 AAGTGGGGGTGGGTTGGT 60.702 61.111 0.00 0.00 0.00 3.67
578 579 2.994643 GAAGTGGGGGTGGGTTGGTG 62.995 65.000 0.00 0.00 0.00 4.17
579 580 4.614036 GTGGGGGTGGGTTGGTGG 62.614 72.222 0.00 0.00 0.00 4.61
618 619 4.814294 GGCGGCAGTGGACCTACG 62.814 72.222 3.07 0.00 0.00 3.51
627 628 2.280552 TGGACCTACGTGGCACCTC 61.281 63.158 12.86 0.00 40.22 3.85
628 629 2.577593 GACCTACGTGGCACCTCC 59.422 66.667 12.86 0.00 40.22 4.30
662 663 0.817654 ACTCCATGAAGATCGACGCA 59.182 50.000 0.00 0.00 0.00 5.24
696 697 7.063898 CGTTCAGCTTGAGAAGAGAAAATATGA 59.936 37.037 0.00 0.00 0.00 2.15
756 757 8.890410 TTCCCTCCGTAAGCTAATATAATAGT 57.110 34.615 0.00 0.00 0.00 2.12
757 758 8.289939 TCCCTCCGTAAGCTAATATAATAGTG 57.710 38.462 0.00 0.00 0.00 2.74
758 759 7.892241 TCCCTCCGTAAGCTAATATAATAGTGT 59.108 37.037 0.00 0.00 0.00 3.55
759 760 8.529476 CCCTCCGTAAGCTAATATAATAGTGTT 58.471 37.037 0.00 0.00 0.00 3.32
760 761 9.924650 CCTCCGTAAGCTAATATAATAGTGTTT 57.075 33.333 0.00 0.00 0.00 2.83
799 800 9.601217 AGTGATCTAAACGCTTCTATATTTGTT 57.399 29.630 0.00 0.00 0.00 2.83
808 809 9.490379 AACGCTTCTATATTTGTTTATAGAGGG 57.510 33.333 10.66 10.37 40.50 4.30
809 810 8.867097 ACGCTTCTATATTTGTTTATAGAGGGA 58.133 33.333 10.66 0.00 40.50 4.20
810 811 9.360093 CGCTTCTATATTTGTTTATAGAGGGAG 57.640 37.037 10.66 4.57 40.50 4.30
820 821 7.215719 TGTTTATAGAGGGAGTATCATCACG 57.784 40.000 0.00 0.00 36.25 4.35
829 830 3.492829 GGAGTATCATCACGGGAAGAACC 60.493 52.174 0.00 0.00 36.25 3.62
834 835 1.276421 CATCACGGGAAGAACCAGAGT 59.724 52.381 0.00 0.00 41.20 3.24
835 836 0.679505 TCACGGGAAGAACCAGAGTG 59.320 55.000 0.00 0.00 41.20 3.51
837 838 0.680061 ACGGGAAGAACCAGAGTGAC 59.320 55.000 0.00 0.00 41.20 3.67
838 839 0.388649 CGGGAAGAACCAGAGTGACG 60.389 60.000 0.00 0.00 41.20 4.35
1140 1141 1.137282 TCTTCGTACAACACTGTGCCA 59.863 47.619 7.90 0.00 34.91 4.92
1359 1363 5.012046 TGGTGGTGAGTATCTTGGCTATATG 59.988 44.000 0.00 0.00 34.92 1.78
1387 1391 1.697432 ACACTTGTTGGATCGGGAGAA 59.303 47.619 0.00 0.00 45.37 2.87
1476 1480 0.664761 GTACAGCTATGCGGTCCGTA 59.335 55.000 13.94 9.25 38.09 4.02
1581 1654 5.675538 AGGAAGTTTAGATCTCCGAATTGG 58.324 41.667 0.00 0.00 40.09 3.16
1586 1659 2.698855 AGATCTCCGAATTGGGTGTG 57.301 50.000 6.37 0.00 38.76 3.82
1589 1662 0.323629 TCTCCGAATTGGGTGTGTCC 59.676 55.000 6.37 0.00 38.76 4.02
1596 1669 2.713531 ATTGGGTGTGTCCAGGGCAC 62.714 60.000 18.14 18.14 38.17 5.01
1597 1670 3.884774 GGGTGTGTCCAGGGCACA 61.885 66.667 23.73 23.73 43.60 4.57
1599 1672 1.675641 GGTGTGTCCAGGGCACATC 60.676 63.158 29.60 25.78 46.66 3.06
1600 1673 1.376466 GTGTGTCCAGGGCACATCT 59.624 57.895 29.60 0.00 46.66 2.90
1601 1674 0.613260 GTGTGTCCAGGGCACATCTA 59.387 55.000 29.60 3.72 46.66 1.98
1602 1675 0.904649 TGTGTCCAGGGCACATCTAG 59.095 55.000 23.73 0.00 41.32 2.43
1603 1676 1.195115 GTGTCCAGGGCACATCTAGA 58.805 55.000 20.05 0.00 36.88 2.43
1604 1677 1.765314 GTGTCCAGGGCACATCTAGAT 59.235 52.381 20.05 0.00 36.88 1.98
1605 1678 1.764723 TGTCCAGGGCACATCTAGATG 59.235 52.381 27.63 27.63 44.15 2.90
1620 1693 7.069852 CATCTAGATGTGCCATAGTTATTGC 57.930 40.000 22.42 0.00 34.23 3.56
1621 1694 6.173427 TCTAGATGTGCCATAGTTATTGCA 57.827 37.500 0.00 0.00 32.69 4.08
1681 1757 4.663334 AGAGGAAAGAAAATACCCACACC 58.337 43.478 0.00 0.00 0.00 4.16
1688 1764 6.590234 AAGAAAATACCCACACCAATCTTC 57.410 37.500 0.00 0.00 0.00 2.87
1717 1793 9.685828 GTAAGATCAATGATACAGGACTTAGAC 57.314 37.037 0.00 0.00 0.00 2.59
2063 2148 1.186200 TTGTCTATCGGCACAGAGCT 58.814 50.000 0.00 0.00 44.79 4.09
2246 2395 6.573434 TCCGCAGCTATCAGTAATATAATGG 58.427 40.000 0.00 0.00 0.00 3.16
2259 2411 9.301153 CAGTAATATAATGGGTTGTTCTTTTGC 57.699 33.333 0.00 0.00 0.00 3.68
2398 5936 1.211949 TGGAAGGGTATGCTACTTGGC 59.788 52.381 0.00 0.00 0.00 4.52
2806 6365 7.681304 GCACTATCTCTAATCGGAAGTACAACA 60.681 40.741 0.00 0.00 0.00 3.33
2853 6419 5.921004 TCCAAATGCAAATTGCTAACAAC 57.079 34.783 19.34 0.00 45.31 3.32
3315 6949 8.759641 CATAACTTTCTGTTCTATGATTCTCCG 58.240 37.037 0.00 0.00 39.89 4.63
3341 6975 4.012374 ACACCTGCATCTCCTTGTTAATG 58.988 43.478 0.00 0.00 0.00 1.90
3592 7324 6.094881 TCCTAATTGGTGCAGCTATTTGTTAC 59.905 38.462 26.05 0.00 37.07 2.50
3594 7326 5.567138 ATTGGTGCAGCTATTTGTTACTC 57.433 39.130 18.08 0.00 0.00 2.59
3595 7327 3.343617 TGGTGCAGCTATTTGTTACTCC 58.656 45.455 18.08 0.00 0.00 3.85
3597 7329 3.610911 GTGCAGCTATTTGTTACTCCCT 58.389 45.455 0.00 0.00 0.00 4.20
3598 7330 3.623510 GTGCAGCTATTTGTTACTCCCTC 59.376 47.826 0.00 0.00 0.00 4.30
3599 7331 3.206964 GCAGCTATTTGTTACTCCCTCC 58.793 50.000 0.00 0.00 0.00 4.30
3600 7332 3.458189 CAGCTATTTGTTACTCCCTCCG 58.542 50.000 0.00 0.00 0.00 4.63
3601 7333 3.105283 AGCTATTTGTTACTCCCTCCGT 58.895 45.455 0.00 0.00 0.00 4.69
3602 7334 3.132467 AGCTATTTGTTACTCCCTCCGTC 59.868 47.826 0.00 0.00 0.00 4.79
3603 7335 3.740452 GCTATTTGTTACTCCCTCCGTCC 60.740 52.174 0.00 0.00 0.00 4.79
3604 7336 0.978907 TTTGTTACTCCCTCCGTCCC 59.021 55.000 0.00 0.00 0.00 4.46
3605 7337 0.178926 TTGTTACTCCCTCCGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
3606 7338 0.042131 TGTTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
3607 7339 1.288633 TGTTACTCCCTCCGTCCCATA 59.711 52.381 0.00 0.00 0.00 2.74
3608 7340 2.292389 TGTTACTCCCTCCGTCCCATAA 60.292 50.000 0.00 0.00 0.00 1.90
3609 7341 2.970640 GTTACTCCCTCCGTCCCATAAT 59.029 50.000 0.00 0.00 0.00 1.28
3610 7342 4.154942 GTTACTCCCTCCGTCCCATAATA 58.845 47.826 0.00 0.00 0.00 0.98
3611 7343 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3612 7344 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3613 7345 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3614 7346 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3615 7347 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3616 7348 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3617 7349 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3618 7350 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3619 7351 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
3620 7352 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3621 7353 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
3622 7354 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
3623 7355 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
3650 7382 5.568296 CACTAGTGTAGTGTAAGAAACGCTC 59.432 44.000 15.06 0.00 46.05 5.03
3651 7383 4.850347 AGTGTAGTGTAAGAAACGCTCT 57.150 40.909 0.00 0.00 46.05 4.09
3652 7384 5.197682 AGTGTAGTGTAAGAAACGCTCTT 57.802 39.130 5.74 5.74 46.05 2.85
3653 7385 6.323203 AGTGTAGTGTAAGAAACGCTCTTA 57.677 37.500 3.98 3.98 46.05 2.10
3654 7386 6.921914 AGTGTAGTGTAAGAAACGCTCTTAT 58.078 36.000 9.95 0.00 46.05 1.73
3655 7387 8.048534 AGTGTAGTGTAAGAAACGCTCTTATA 57.951 34.615 9.95 5.77 46.05 0.98
3656 7388 8.684520 AGTGTAGTGTAAGAAACGCTCTTATAT 58.315 33.333 9.95 3.94 46.05 0.86
3657 7389 9.298774 GTGTAGTGTAAGAAACGCTCTTATATT 57.701 33.333 9.95 7.51 46.05 1.28
3661 7393 9.477484 AGTGTAAGAAACGCTCTTATATTATGG 57.523 33.333 9.95 0.00 46.05 2.74
3662 7394 8.709646 GTGTAAGAAACGCTCTTATATTATGGG 58.290 37.037 9.95 0.00 46.09 4.00
3663 7395 8.644216 TGTAAGAAACGCTCTTATATTATGGGA 58.356 33.333 9.95 0.00 46.09 4.37
3664 7396 7.964604 AAGAAACGCTCTTATATTATGGGAC 57.035 36.000 0.00 0.00 42.90 4.46
3665 7397 6.157211 AGAAACGCTCTTATATTATGGGACG 58.843 40.000 0.00 0.00 0.00 4.79
3666 7398 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
3667 7399 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
3668 7400 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
3669 7401 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
3670 7402 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
3671 7403 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
3672 7404 5.850278 TCTTATATTATGGGACGGAGGGAT 58.150 41.667 0.00 0.00 0.00 3.85
3673 7405 6.269194 TCTTATATTATGGGACGGAGGGATT 58.731 40.000 0.00 0.00 0.00 3.01
3674 7406 7.424172 TCTTATATTATGGGACGGAGGGATTA 58.576 38.462 0.00 0.00 0.00 1.75
3675 7407 8.071854 TCTTATATTATGGGACGGAGGGATTAT 58.928 37.037 0.00 0.00 0.00 1.28
3676 7408 8.632731 TTATATTATGGGACGGAGGGATTATT 57.367 34.615 0.00 0.00 0.00 1.40
3677 7409 9.732453 TTATATTATGGGACGGAGGGATTATTA 57.268 33.333 0.00 0.00 0.00 0.98
3678 7410 8.814448 ATATTATGGGACGGAGGGATTATTAT 57.186 34.615 0.00 0.00 0.00 1.28
3679 7411 6.555463 TTATGGGACGGAGGGATTATTATC 57.445 41.667 0.00 0.00 0.00 1.75
3680 7412 3.864328 TGGGACGGAGGGATTATTATCA 58.136 45.455 0.00 0.00 32.09 2.15
3681 7413 3.838317 TGGGACGGAGGGATTATTATCAG 59.162 47.826 0.00 0.00 32.09 2.90
3710 7442 9.868277 TTTAAATCATGTGGGTTTGATTACATC 57.132 29.630 0.00 0.00 40.70 3.06
3784 7525 7.153985 CCTATCTTTTCCATTGTTTGCTTTGA 58.846 34.615 0.00 0.00 0.00 2.69
3787 7528 7.862512 TCTTTTCCATTGTTTGCTTTGAAAT 57.137 28.000 0.00 0.00 0.00 2.17
3790 7531 7.862512 TTTCCATTGTTTGCTTTGAAATCTT 57.137 28.000 0.00 0.00 0.00 2.40
3796 7540 7.760131 TTGTTTGCTTTGAAATCTTCTCTTG 57.240 32.000 0.00 0.00 0.00 3.02
3869 7617 7.979444 TCTCAATGGGTTGTCTAGTAAAAAG 57.021 36.000 0.00 0.00 36.69 2.27
4130 8824 6.902771 ATCCTATCACAGCGTCTTTACTAT 57.097 37.500 0.00 0.00 0.00 2.12
4256 8957 1.030457 CAATCAATCCTGGAGCCAGC 58.970 55.000 11.07 0.00 42.35 4.85
4673 9552 9.597681 AGATATCATTCTTGCATTATTCCCTTT 57.402 29.630 5.32 0.00 0.00 3.11
4674 9553 9.635520 GATATCATTCTTGCATTATTCCCTTTG 57.364 33.333 0.00 0.00 0.00 2.77
4702 9582 7.602753 ACTTTTGATGCTTAATGTTTAGTCCC 58.397 34.615 0.00 0.00 0.00 4.46
4720 9600 2.882137 TCCCTTTTTCCTGTTGCTAACG 59.118 45.455 0.00 0.00 0.00 3.18
4806 9686 7.891183 AGTTCATATGTGTTCTGTGTAGTTC 57.109 36.000 1.90 0.00 0.00 3.01
5032 10184 7.711846 TGTTGTGTCATTAAGCAATACAAGTT 58.288 30.769 0.00 0.00 0.00 2.66
5228 10415 3.307480 CGGTGAGTTGACCCCTCTATTTT 60.307 47.826 0.00 0.00 31.57 1.82
5258 10445 8.096621 TGGTGGTTCTGGAATTTCTGTATATA 57.903 34.615 0.00 0.00 0.00 0.86
5298 10485 5.245751 TGGATATGTTTTGTCTGGTTTGCAT 59.754 36.000 0.00 0.00 0.00 3.96
5308 10495 1.267806 CTGGTTTGCATTCGTTCTGCT 59.732 47.619 0.00 0.00 40.34 4.24
5309 10496 1.001487 TGGTTTGCATTCGTTCTGCTG 60.001 47.619 0.00 0.00 40.34 4.41
5310 10497 1.055338 GTTTGCATTCGTTCTGCTGC 58.945 50.000 0.00 0.00 40.34 5.25
5421 10613 0.687757 ATTCTCAGCAGGGCTACCGA 60.688 55.000 0.00 0.00 43.47 4.69
5490 10682 4.016444 CACAACAGCCTGGTTATGGTTAT 58.984 43.478 0.00 0.00 0.00 1.89
6090 11324 1.152917 TCTGCCCCTCCATCTGGATAT 59.847 52.381 0.00 0.00 44.46 1.63
6158 11402 2.202878 CGCATACGGTCAGGGTGG 60.203 66.667 0.00 0.00 34.97 4.61
6300 11552 2.907179 GCCTTACCCTGGTGCACCT 61.907 63.158 34.75 18.47 36.82 4.00
6429 11681 0.467384 CGTCCCAGGATCAATCTGCT 59.533 55.000 0.00 0.00 0.00 4.24
6432 11684 0.183014 CCCAGGATCAATCTGCTGCT 59.817 55.000 0.00 0.00 0.00 4.24
6534 11792 1.077644 CTCCTGCCTCAGCTGCATT 60.078 57.895 9.47 0.00 40.80 3.56
6575 11833 5.163311 TGGCTCTGCTGCTTGAAGTATAATA 60.163 40.000 0.00 0.00 0.00 0.98
6620 11883 5.280945 TGTTATTGCTTGCTTGTGAACTTC 58.719 37.500 0.00 0.00 0.00 3.01
6706 11969 1.462616 GCTGGTGCATAATGTGACCA 58.537 50.000 0.00 0.00 36.39 4.02
6728 11991 7.645058 CCAATACTTGGTTTGGATACTGAAT 57.355 36.000 0.00 0.00 44.23 2.57
6757 12020 5.261209 TGTGTTCAGTTTTGCAGCTTAAT 57.739 34.783 0.00 0.00 0.00 1.40
6834 12108 4.022849 GCACTTGAGCCTCATACTTTGTTT 60.023 41.667 0.00 0.00 0.00 2.83
6885 12159 1.133513 TGGGGAGCACTGTTTCATTGT 60.134 47.619 0.00 0.00 0.00 2.71
6888 12163 2.350772 GGGAGCACTGTTTCATTGTTCG 60.351 50.000 0.00 0.00 28.39 3.95
6935 12225 6.741992 TGTAGACATGTTTTAGAATGCAGG 57.258 37.500 0.00 0.00 0.00 4.85
6936 12226 6.237901 TGTAGACATGTTTTAGAATGCAGGT 58.762 36.000 0.00 0.00 0.00 4.00
6937 12227 6.714810 TGTAGACATGTTTTAGAATGCAGGTT 59.285 34.615 0.00 0.00 0.00 3.50
6938 12228 6.259550 AGACATGTTTTAGAATGCAGGTTC 57.740 37.500 0.00 0.00 0.00 3.62
6939 12229 5.769662 AGACATGTTTTAGAATGCAGGTTCA 59.230 36.000 0.00 0.00 0.00 3.18
6940 12230 5.772521 ACATGTTTTAGAATGCAGGTTCAC 58.227 37.500 0.00 0.00 0.00 3.18
6941 12231 5.536161 ACATGTTTTAGAATGCAGGTTCACT 59.464 36.000 0.00 0.00 0.00 3.41
6942 12232 5.689383 TGTTTTAGAATGCAGGTTCACTC 57.311 39.130 3.04 0.00 0.00 3.51
6943 12233 5.129634 TGTTTTAGAATGCAGGTTCACTCA 58.870 37.500 3.04 0.00 0.00 3.41
6944 12234 5.769662 TGTTTTAGAATGCAGGTTCACTCAT 59.230 36.000 3.04 0.00 0.00 2.90
6945 12235 6.265196 TGTTTTAGAATGCAGGTTCACTCATT 59.735 34.615 3.04 0.00 32.97 2.57
6946 12236 6.899393 TTTAGAATGCAGGTTCACTCATTT 57.101 33.333 3.04 0.00 31.53 2.32
6947 12237 6.899393 TTAGAATGCAGGTTCACTCATTTT 57.101 33.333 3.04 0.00 31.53 1.82
6948 12238 7.994425 TTAGAATGCAGGTTCACTCATTTTA 57.006 32.000 3.04 0.00 31.53 1.52
6949 12239 6.506500 AGAATGCAGGTTCACTCATTTTAG 57.493 37.500 3.04 0.00 31.53 1.85
6950 12240 4.708726 ATGCAGGTTCACTCATTTTAGC 57.291 40.909 0.00 0.00 0.00 3.09
6951 12241 3.485394 TGCAGGTTCACTCATTTTAGCA 58.515 40.909 0.00 0.00 0.00 3.49
6952 12242 4.081406 TGCAGGTTCACTCATTTTAGCAT 58.919 39.130 0.00 0.00 0.00 3.79
6953 12243 4.082625 TGCAGGTTCACTCATTTTAGCATG 60.083 41.667 0.00 0.00 0.00 4.06
6954 12244 4.418392 CAGGTTCACTCATTTTAGCATGC 58.582 43.478 10.51 10.51 0.00 4.06
6955 12245 4.081406 AGGTTCACTCATTTTAGCATGCA 58.919 39.130 21.98 2.77 0.00 3.96
6956 12246 4.157289 AGGTTCACTCATTTTAGCATGCAG 59.843 41.667 21.98 8.98 0.00 4.41
6957 12247 4.418392 GTTCACTCATTTTAGCATGCAGG 58.582 43.478 21.98 0.00 0.00 4.85
6958 12248 3.689347 TCACTCATTTTAGCATGCAGGT 58.311 40.909 21.98 1.04 0.00 4.00
6962 12252 4.082571 ACTCATTTTAGCATGCAGGTTCAC 60.083 41.667 21.98 0.00 0.00 3.18
7097 12436 2.034812 AGATCGATCTTGGGTTACGCTC 59.965 50.000 22.32 0.00 31.97 5.03
7100 12439 1.152383 GATCTTGGGTTACGCTCGCC 61.152 60.000 0.36 0.00 0.00 5.54
7106 12445 2.124860 GTTACGCTCGCCCCCAAT 60.125 61.111 0.00 0.00 0.00 3.16
7168 12508 7.453126 TGGTGTGGTGATTATAAAACATTCCTT 59.547 33.333 0.00 0.00 0.00 3.36
7169 12509 7.973944 GGTGTGGTGATTATAAAACATTCCTTC 59.026 37.037 0.00 0.00 0.00 3.46
7207 12547 5.475909 TCCCTGTTACCGACATCTATACATC 59.524 44.000 0.00 0.00 37.69 3.06
7217 12557 9.647918 ACCGACATCTATACATCCATATAATCT 57.352 33.333 0.00 0.00 0.00 2.40
7322 12966 4.392940 CTGTTTCCCTTGTGAATGACTCT 58.607 43.478 0.00 0.00 0.00 3.24
7326 12970 4.212143 TCCCTTGTGAATGACTCTCATG 57.788 45.455 0.00 0.00 37.15 3.07
7327 12971 3.584406 TCCCTTGTGAATGACTCTCATGT 59.416 43.478 0.00 0.00 37.15 3.21
7328 12972 4.042062 TCCCTTGTGAATGACTCTCATGTT 59.958 41.667 0.00 0.00 37.15 2.71
7329 12973 4.394300 CCCTTGTGAATGACTCTCATGTTC 59.606 45.833 0.00 0.00 37.15 3.18
7330 12974 5.243981 CCTTGTGAATGACTCTCATGTTCT 58.756 41.667 0.00 0.00 37.15 3.01
7331 12975 5.704515 CCTTGTGAATGACTCTCATGTTCTT 59.295 40.000 0.00 0.00 37.15 2.52
7332 12976 6.206243 CCTTGTGAATGACTCTCATGTTCTTT 59.794 38.462 0.00 0.00 37.15 2.52
7333 12977 7.255381 CCTTGTGAATGACTCTCATGTTCTTTT 60.255 37.037 0.00 0.00 37.15 2.27
7334 12978 6.962686 TGTGAATGACTCTCATGTTCTTTTG 58.037 36.000 0.00 0.00 37.15 2.44
7335 12979 6.543465 TGTGAATGACTCTCATGTTCTTTTGT 59.457 34.615 0.00 0.00 37.15 2.83
7336 12980 7.067372 TGTGAATGACTCTCATGTTCTTTTGTT 59.933 33.333 0.00 0.00 37.15 2.83
7337 12981 7.589221 GTGAATGACTCTCATGTTCTTTTGTTC 59.411 37.037 0.00 0.00 37.15 3.18
7338 12982 7.282901 TGAATGACTCTCATGTTCTTTTGTTCA 59.717 33.333 0.00 0.00 37.15 3.18
7339 12983 6.609237 TGACTCTCATGTTCTTTTGTTCAG 57.391 37.500 0.00 0.00 0.00 3.02
7340 12984 6.348498 TGACTCTCATGTTCTTTTGTTCAGA 58.652 36.000 0.00 0.00 0.00 3.27
7341 12985 6.823182 TGACTCTCATGTTCTTTTGTTCAGAA 59.177 34.615 0.00 0.00 0.00 3.02
7342 12986 7.500227 TGACTCTCATGTTCTTTTGTTCAGAAT 59.500 33.333 0.00 0.00 32.86 2.40
7343 12987 7.646314 ACTCTCATGTTCTTTTGTTCAGAATG 58.354 34.615 0.00 0.00 32.86 2.67
7344 12988 7.284034 ACTCTCATGTTCTTTTGTTCAGAATGT 59.716 33.333 0.00 0.00 37.40 2.71
7345 12989 7.999679 TCTCATGTTCTTTTGTTCAGAATGTT 58.000 30.769 0.00 0.00 37.40 2.71
7346 12990 8.131100 TCTCATGTTCTTTTGTTCAGAATGTTC 58.869 33.333 0.00 0.00 37.40 3.18
7347 12991 7.770201 TCATGTTCTTTTGTTCAGAATGTTCA 58.230 30.769 0.00 0.00 37.40 3.18
7348 12992 7.916977 TCATGTTCTTTTGTTCAGAATGTTCAG 59.083 33.333 0.00 0.00 37.40 3.02
7349 12993 7.156876 TGTTCTTTTGTTCAGAATGTTCAGT 57.843 32.000 0.00 0.00 37.40 3.41
7350 12994 7.601856 TGTTCTTTTGTTCAGAATGTTCAGTT 58.398 30.769 0.00 0.00 37.40 3.16
7351 12995 8.735315 TGTTCTTTTGTTCAGAATGTTCAGTTA 58.265 29.630 0.00 0.00 37.40 2.24
7352 12996 9.567848 GTTCTTTTGTTCAGAATGTTCAGTTAA 57.432 29.630 0.00 0.00 37.40 2.01
7354 12998 9.567848 TCTTTTGTTCAGAATGTTCAGTTAAAC 57.432 29.630 0.00 0.00 37.40 2.01
7355 12999 9.573133 CTTTTGTTCAGAATGTTCAGTTAAACT 57.427 29.630 0.00 0.00 37.40 2.66
7356 13000 9.567848 TTTTGTTCAGAATGTTCAGTTAAACTC 57.432 29.630 0.00 0.00 37.40 3.01
7357 13001 7.857734 TGTTCAGAATGTTCAGTTAAACTCA 57.142 32.000 0.00 0.00 37.40 3.41
7358 13002 7.919690 TGTTCAGAATGTTCAGTTAAACTCAG 58.080 34.615 0.00 0.00 37.40 3.35
7359 13003 6.545504 TCAGAATGTTCAGTTAAACTCAGC 57.454 37.500 0.00 0.00 37.40 4.26
7360 13004 6.291377 TCAGAATGTTCAGTTAAACTCAGCT 58.709 36.000 0.00 0.00 37.40 4.24
7361 13005 6.203530 TCAGAATGTTCAGTTAAACTCAGCTG 59.796 38.462 7.63 7.63 37.40 4.24
7362 13006 6.203530 CAGAATGTTCAGTTAAACTCAGCTGA 59.796 38.462 17.19 17.19 34.42 4.26
7364 13008 5.276461 TGTTCAGTTAAACTCAGCTGAGA 57.724 39.130 42.76 23.16 44.74 3.27
7365 13009 5.858381 TGTTCAGTTAAACTCAGCTGAGAT 58.142 37.500 42.76 32.15 44.74 2.75
7366 13010 5.698089 TGTTCAGTTAAACTCAGCTGAGATG 59.302 40.000 42.76 28.52 44.74 2.90
7367 13011 4.248859 TCAGTTAAACTCAGCTGAGATGC 58.751 43.478 42.76 27.10 44.74 3.91
7368 13012 3.061831 CAGTTAAACTCAGCTGAGATGCG 59.938 47.826 42.76 22.47 44.74 4.73
7369 13013 2.299993 TAAACTCAGCTGAGATGCGG 57.700 50.000 42.76 21.77 44.74 5.69
7370 13014 0.322975 AAACTCAGCTGAGATGCGGT 59.677 50.000 42.76 22.43 44.74 5.68
7371 13015 0.322975 AACTCAGCTGAGATGCGGTT 59.677 50.000 42.76 26.37 44.74 4.44
7372 13016 0.108424 ACTCAGCTGAGATGCGGTTC 60.108 55.000 42.76 0.00 44.74 3.62
7373 13017 0.108472 CTCAGCTGAGATGCGGTTCA 60.108 55.000 35.69 0.06 44.74 3.18
7374 13018 0.538584 TCAGCTGAGATGCGGTTCAT 59.461 50.000 13.74 0.00 38.32 2.57
7375 13019 0.656259 CAGCTGAGATGCGGTTCATG 59.344 55.000 8.42 0.00 35.05 3.07
7376 13020 0.251354 AGCTGAGATGCGGTTCATGT 59.749 50.000 0.00 0.00 35.05 3.21
7377 13021 1.482182 AGCTGAGATGCGGTTCATGTA 59.518 47.619 0.00 0.00 35.05 2.29
7378 13022 1.863454 GCTGAGATGCGGTTCATGTAG 59.137 52.381 0.00 0.00 35.05 2.74
7379 13023 2.481969 GCTGAGATGCGGTTCATGTAGA 60.482 50.000 0.00 0.00 35.05 2.59
7380 13024 3.785486 CTGAGATGCGGTTCATGTAGAA 58.215 45.455 0.00 0.00 35.05 2.10
7381 13025 4.183865 CTGAGATGCGGTTCATGTAGAAA 58.816 43.478 0.00 0.00 38.13 2.52
7382 13026 4.574892 TGAGATGCGGTTCATGTAGAAAA 58.425 39.130 0.00 0.00 38.13 2.29
7383 13027 4.391830 TGAGATGCGGTTCATGTAGAAAAC 59.608 41.667 0.00 0.00 38.13 2.43
7384 13028 3.689649 AGATGCGGTTCATGTAGAAAACC 59.310 43.478 3.67 3.67 38.13 3.27
7388 13032 3.824414 GGTTCATGTAGAAAACCGTGG 57.176 47.619 0.00 0.00 38.13 4.94
7389 13033 3.404899 GGTTCATGTAGAAAACCGTGGA 58.595 45.455 0.00 0.00 38.13 4.02
7390 13034 3.435671 GGTTCATGTAGAAAACCGTGGAG 59.564 47.826 0.00 0.00 38.13 3.86
7391 13035 2.695359 TCATGTAGAAAACCGTGGAGC 58.305 47.619 0.00 0.00 0.00 4.70
7392 13036 2.037902 TCATGTAGAAAACCGTGGAGCA 59.962 45.455 0.00 0.00 0.00 4.26
7393 13037 1.873698 TGTAGAAAACCGTGGAGCAC 58.126 50.000 0.00 0.00 0.00 4.40
7394 13038 1.414919 TGTAGAAAACCGTGGAGCACT 59.585 47.619 0.00 0.00 31.34 4.40
7395 13039 2.158871 TGTAGAAAACCGTGGAGCACTT 60.159 45.455 0.00 0.00 31.34 3.16
7396 13040 2.052782 AGAAAACCGTGGAGCACTTT 57.947 45.000 0.00 0.00 31.34 2.66
7397 13041 2.375146 AGAAAACCGTGGAGCACTTTT 58.625 42.857 0.00 0.00 31.34 2.27
7398 13042 2.357952 AGAAAACCGTGGAGCACTTTTC 59.642 45.455 0.00 0.00 38.07 2.29
7399 13043 1.757682 AAACCGTGGAGCACTTTTCA 58.242 45.000 0.00 0.00 31.34 2.69
7400 13044 1.308998 AACCGTGGAGCACTTTTCAG 58.691 50.000 0.00 0.00 31.34 3.02
7401 13045 0.180406 ACCGTGGAGCACTTTTCAGT 59.820 50.000 0.00 0.00 31.34 3.41
7402 13046 1.308998 CCGTGGAGCACTTTTCAGTT 58.691 50.000 0.00 0.00 31.34 3.16
7403 13047 1.676006 CCGTGGAGCACTTTTCAGTTT 59.324 47.619 0.00 0.00 31.34 2.66
7404 13048 2.099098 CCGTGGAGCACTTTTCAGTTTT 59.901 45.455 0.00 0.00 31.34 2.43
7405 13049 3.314080 CCGTGGAGCACTTTTCAGTTTTA 59.686 43.478 0.00 0.00 31.34 1.52
7406 13050 4.023193 CCGTGGAGCACTTTTCAGTTTTAT 60.023 41.667 0.00 0.00 31.34 1.40
7407 13051 4.911610 CGTGGAGCACTTTTCAGTTTTATG 59.088 41.667 0.00 0.00 31.34 1.90
7408 13052 5.222631 GTGGAGCACTTTTCAGTTTTATGG 58.777 41.667 0.00 0.00 0.00 2.74
7409 13053 5.009610 GTGGAGCACTTTTCAGTTTTATGGA 59.990 40.000 0.00 0.00 0.00 3.41
7410 13054 5.009610 TGGAGCACTTTTCAGTTTTATGGAC 59.990 40.000 0.00 0.00 0.00 4.02
7411 13055 5.241728 GGAGCACTTTTCAGTTTTATGGACT 59.758 40.000 0.00 0.00 0.00 3.85
7412 13056 6.076981 AGCACTTTTCAGTTTTATGGACTG 57.923 37.500 0.00 0.00 44.54 3.51
7413 13057 5.594317 AGCACTTTTCAGTTTTATGGACTGT 59.406 36.000 4.40 0.00 43.80 3.55
7414 13058 6.770785 AGCACTTTTCAGTTTTATGGACTGTA 59.229 34.615 4.40 0.00 43.80 2.74
7415 13059 7.448469 AGCACTTTTCAGTTTTATGGACTGTAT 59.552 33.333 4.40 0.00 43.80 2.29
7416 13060 7.750903 GCACTTTTCAGTTTTATGGACTGTATC 59.249 37.037 4.40 0.00 43.80 2.24
7417 13061 8.783093 CACTTTTCAGTTTTATGGACTGTATCA 58.217 33.333 4.40 0.00 43.80 2.15
7418 13062 8.784043 ACTTTTCAGTTTTATGGACTGTATCAC 58.216 33.333 4.40 0.00 43.80 3.06
7419 13063 6.961359 TTCAGTTTTATGGACTGTATCACG 57.039 37.500 4.40 0.00 43.80 4.35
7420 13064 6.275494 TCAGTTTTATGGACTGTATCACGA 57.725 37.500 4.40 0.00 43.80 4.35
7421 13065 6.097356 TCAGTTTTATGGACTGTATCACGAC 58.903 40.000 4.40 0.00 43.80 4.34
7422 13066 5.291128 CAGTTTTATGGACTGTATCACGACC 59.709 44.000 0.00 0.00 39.66 4.79
7423 13067 5.187186 AGTTTTATGGACTGTATCACGACCT 59.813 40.000 0.00 0.00 0.00 3.85
7424 13068 4.649088 TTATGGACTGTATCACGACCTG 57.351 45.455 0.00 0.00 0.00 4.00
7425 13069 2.209690 TGGACTGTATCACGACCTGA 57.790 50.000 0.00 0.00 0.00 3.86
7426 13070 2.092323 TGGACTGTATCACGACCTGAG 58.908 52.381 0.00 0.00 30.20 3.35
7427 13071 2.290705 TGGACTGTATCACGACCTGAGA 60.291 50.000 0.00 0.00 30.20 3.27
7428 13072 2.097791 GGACTGTATCACGACCTGAGAC 59.902 54.545 0.00 0.00 40.93 3.36
7429 13073 2.747989 GACTGTATCACGACCTGAGACA 59.252 50.000 2.54 2.54 46.64 3.41
7431 13075 2.791655 TGTATCACGACCTGAGACAGT 58.208 47.619 0.00 0.00 44.49 3.55
7432 13076 3.946606 TGTATCACGACCTGAGACAGTA 58.053 45.455 0.00 0.00 44.49 2.74
7433 13077 3.688185 TGTATCACGACCTGAGACAGTAC 59.312 47.826 0.00 0.00 44.49 2.73
7434 13078 2.265589 TCACGACCTGAGACAGTACA 57.734 50.000 0.00 0.00 0.00 2.90
7435 13079 2.578786 TCACGACCTGAGACAGTACAA 58.421 47.619 0.00 0.00 0.00 2.41
7436 13080 2.292569 TCACGACCTGAGACAGTACAAC 59.707 50.000 0.00 0.00 0.00 3.32
7437 13081 2.293677 CACGACCTGAGACAGTACAACT 59.706 50.000 0.00 0.00 0.00 3.16
7438 13082 7.280896 ATCACGACCTGAGACAGTACAACTG 62.281 48.000 5.53 5.53 41.34 3.16
7451 13095 5.491070 CAGTACAACTGGAGAATCATTCCA 58.509 41.667 0.00 0.00 42.35 3.53
7452 13096 5.939883 CAGTACAACTGGAGAATCATTCCAA 59.060 40.000 0.00 0.00 43.79 3.53
7453 13097 6.430925 CAGTACAACTGGAGAATCATTCCAAA 59.569 38.462 0.00 0.00 43.79 3.28
7454 13098 5.712152 ACAACTGGAGAATCATTCCAAAC 57.288 39.130 0.00 0.00 43.79 2.93
7455 13099 5.388654 ACAACTGGAGAATCATTCCAAACT 58.611 37.500 0.00 0.00 43.79 2.66
7456 13100 5.474876 ACAACTGGAGAATCATTCCAAACTC 59.525 40.000 0.00 0.00 43.79 3.01
7457 13101 4.593956 ACTGGAGAATCATTCCAAACTCC 58.406 43.478 0.00 0.00 43.79 3.85
7459 13103 4.335416 TGGAGAATCATTCCAAACTCCAC 58.665 43.478 0.00 0.00 45.53 4.02
7460 13104 4.043310 TGGAGAATCATTCCAAACTCCACT 59.957 41.667 0.00 0.00 45.53 4.00
7461 13105 5.250543 TGGAGAATCATTCCAAACTCCACTA 59.749 40.000 0.00 0.00 45.53 2.74
7462 13106 6.069440 TGGAGAATCATTCCAAACTCCACTAT 60.069 38.462 0.00 0.00 45.53 2.12
7463 13107 7.127186 TGGAGAATCATTCCAAACTCCACTATA 59.873 37.037 0.00 0.00 45.53 1.31
7464 13108 7.442666 GGAGAATCATTCCAAACTCCACTATAC 59.557 40.741 0.00 0.00 42.11 1.47
7465 13109 8.095452 AGAATCATTCCAAACTCCACTATACT 57.905 34.615 0.00 0.00 0.00 2.12
7466 13110 7.989741 AGAATCATTCCAAACTCCACTATACTG 59.010 37.037 0.00 0.00 0.00 2.74
7467 13111 5.428253 TCATTCCAAACTCCACTATACTGC 58.572 41.667 0.00 0.00 0.00 4.40
7468 13112 5.189736 TCATTCCAAACTCCACTATACTGCT 59.810 40.000 0.00 0.00 0.00 4.24
7469 13113 4.737855 TCCAAACTCCACTATACTGCTC 57.262 45.455 0.00 0.00 0.00 4.26
7470 13114 3.451178 TCCAAACTCCACTATACTGCTCC 59.549 47.826 0.00 0.00 0.00 4.70
7471 13115 3.452627 CCAAACTCCACTATACTGCTCCT 59.547 47.826 0.00 0.00 0.00 3.69
7472 13116 4.080863 CCAAACTCCACTATACTGCTCCTT 60.081 45.833 0.00 0.00 0.00 3.36
7473 13117 5.491982 CAAACTCCACTATACTGCTCCTTT 58.508 41.667 0.00 0.00 0.00 3.11
7474 13118 5.763876 AACTCCACTATACTGCTCCTTTT 57.236 39.130 0.00 0.00 0.00 2.27
7475 13119 5.763876 ACTCCACTATACTGCTCCTTTTT 57.236 39.130 0.00 0.00 0.00 1.94
7476 13120 5.735766 ACTCCACTATACTGCTCCTTTTTC 58.264 41.667 0.00 0.00 0.00 2.29
7477 13121 5.099042 TCCACTATACTGCTCCTTTTTCC 57.901 43.478 0.00 0.00 0.00 3.13
7478 13122 3.871594 CCACTATACTGCTCCTTTTTCCG 59.128 47.826 0.00 0.00 0.00 4.30
7479 13123 4.504858 CACTATACTGCTCCTTTTTCCGT 58.495 43.478 0.00 0.00 0.00 4.69
7480 13124 4.330074 CACTATACTGCTCCTTTTTCCGTG 59.670 45.833 0.00 0.00 0.00 4.94
7481 13125 3.695830 ATACTGCTCCTTTTTCCGTGA 57.304 42.857 0.00 0.00 0.00 4.35
7482 13126 1.884235 ACTGCTCCTTTTTCCGTGAG 58.116 50.000 0.00 0.00 0.00 3.51
7494 13138 2.270205 CGTGAGGGGCATTGCTCT 59.730 61.111 8.71 6.62 0.00 4.09
7495 13139 2.110967 CGTGAGGGGCATTGCTCTG 61.111 63.158 8.71 0.00 0.00 3.35
7496 13140 1.001641 GTGAGGGGCATTGCTCTGT 60.002 57.895 8.71 0.00 0.00 3.41
7497 13141 0.610232 GTGAGGGGCATTGCTCTGTT 60.610 55.000 8.71 0.00 0.00 3.16
7498 13142 0.112995 TGAGGGGCATTGCTCTGTTT 59.887 50.000 8.71 0.00 0.00 2.83
7499 13143 1.260544 GAGGGGCATTGCTCTGTTTT 58.739 50.000 8.71 0.00 0.00 2.43
7500 13144 0.971386 AGGGGCATTGCTCTGTTTTG 59.029 50.000 8.71 0.00 0.00 2.44
7501 13145 0.968405 GGGGCATTGCTCTGTTTTGA 59.032 50.000 8.71 0.00 0.00 2.69
7502 13146 1.344114 GGGGCATTGCTCTGTTTTGAA 59.656 47.619 8.71 0.00 0.00 2.69
7503 13147 2.611224 GGGGCATTGCTCTGTTTTGAAG 60.611 50.000 8.71 0.00 0.00 3.02
7504 13148 2.064014 GGCATTGCTCTGTTTTGAAGC 58.936 47.619 8.82 0.00 0.00 3.86
7505 13149 2.546373 GGCATTGCTCTGTTTTGAAGCA 60.546 45.455 8.82 0.00 0.00 3.91
7506 13150 3.323243 GCATTGCTCTGTTTTGAAGCAT 58.677 40.909 0.16 0.00 35.33 3.79
7507 13151 3.744426 GCATTGCTCTGTTTTGAAGCATT 59.256 39.130 0.16 0.00 35.33 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.377994 CATATGCCCCCTCCTCTGC 59.622 63.158 0.00 0.00 0.00 4.26
32 33 2.750350 CGTCCCATATGCCCCCTC 59.250 66.667 0.00 0.00 0.00 4.30
69 70 2.789249 CCGATTTTTCGTCCCCGC 59.211 61.111 0.00 0.00 0.00 6.13
77 78 2.350498 TCGATTTCTCCGCCGATTTTTC 59.650 45.455 0.00 0.00 0.00 2.29
97 98 2.811317 CGACAGCTTCAGCCCGTC 60.811 66.667 8.33 8.33 43.38 4.79
105 106 3.112709 GGGCACGTCGACAGCTTC 61.113 66.667 23.79 15.20 0.00 3.86
141 142 3.050275 GCCTTGAGCGTGGGTCAC 61.050 66.667 0.00 0.00 39.84 3.67
296 297 4.504916 CTCCAGTGGCCTCGAGCG 62.505 72.222 6.99 1.35 45.17 5.03
301 302 2.997897 ACGACCTCCAGTGGCCTC 60.998 66.667 3.51 0.00 0.00 4.70
361 362 1.413767 CTCCGTCAGCGTCCAAATCG 61.414 60.000 0.00 0.00 36.15 3.34
373 374 2.093106 GCTAGGTTCTCTTCTCCGTCA 58.907 52.381 0.00 0.00 0.00 4.35
456 457 2.187946 GAGATGGGGACGTGCAGG 59.812 66.667 9.96 4.53 0.00 4.85
458 459 2.994995 ACGAGATGGGGACGTGCA 60.995 61.111 9.96 0.00 0.00 4.57
501 502 1.625818 AGAAAACAGAGGAGGTGCGAT 59.374 47.619 0.00 0.00 0.00 4.58
502 503 1.000955 GAGAAAACAGAGGAGGTGCGA 59.999 52.381 0.00 0.00 0.00 5.10
520 521 0.829333 CACACAGATGGAGGGGAGAG 59.171 60.000 0.00 0.00 0.00 3.20
522 523 0.987294 AACACACAGATGGAGGGGAG 59.013 55.000 0.00 0.00 0.00 4.30
524 525 0.692476 TCAACACACAGATGGAGGGG 59.308 55.000 0.00 0.00 0.00 4.79
556 557 2.826003 AACCCACCCCCACTTCGTC 61.826 63.158 0.00 0.00 0.00 4.20
559 560 2.117423 CCAACCCACCCCCACTTC 59.883 66.667 0.00 0.00 0.00 3.01
575 576 2.973180 GATAACCCTCGCTCGCCACC 62.973 65.000 0.00 0.00 0.00 4.61
576 577 1.591863 GATAACCCTCGCTCGCCAC 60.592 63.158 0.00 0.00 0.00 5.01
577 578 2.792947 GGATAACCCTCGCTCGCCA 61.793 63.158 0.00 0.00 0.00 5.69
578 579 2.029221 GGATAACCCTCGCTCGCC 59.971 66.667 0.00 0.00 0.00 5.54
609 610 2.203728 AGGTGCCACGTAGGTCCA 60.204 61.111 15.87 3.33 40.61 4.02
610 611 2.577593 GAGGTGCCACGTAGGTCC 59.422 66.667 0.00 0.42 40.61 4.46
627 628 1.278238 GAGTGAATCTTGGCGTACGG 58.722 55.000 18.39 0.00 0.00 4.02
628 629 1.278238 GGAGTGAATCTTGGCGTACG 58.722 55.000 11.84 11.84 0.00 3.67
635 636 5.233902 GTCGATCTTCATGGAGTGAATCTTG 59.766 44.000 0.00 0.00 45.36 3.02
654 655 0.376152 AACGTCGTCTATGCGTCGAT 59.624 50.000 11.26 0.00 43.57 3.59
659 660 0.523546 AGCTGAACGTCGTCTATGCG 60.524 55.000 0.00 0.00 0.00 4.73
662 663 2.747989 TCTCAAGCTGAACGTCGTCTAT 59.252 45.455 0.00 0.00 0.00 1.98
669 670 3.735237 TTCTCTTCTCAAGCTGAACGT 57.265 42.857 0.00 0.00 0.00 3.99
696 697 1.167851 TCGATAACTCCCGAACGTGT 58.832 50.000 0.00 0.00 0.00 4.49
732 733 7.892241 ACACTATTATATTAGCTTACGGAGGGA 59.108 37.037 0.00 0.00 0.00 4.20
733 734 8.064336 ACACTATTATATTAGCTTACGGAGGG 57.936 38.462 0.00 0.00 0.00 4.30
734 735 9.924650 AAACACTATTATATTAGCTTACGGAGG 57.075 33.333 0.00 0.00 0.00 4.30
773 774 9.601217 AACAAATATAGAAGCGTTTAGATCACT 57.399 29.630 0.00 0.00 0.00 3.41
782 783 9.490379 CCCTCTATAAACAAATATAGAAGCGTT 57.510 33.333 5.76 0.00 41.81 4.84
783 784 8.867097 TCCCTCTATAAACAAATATAGAAGCGT 58.133 33.333 5.76 0.00 41.81 5.07
784 785 9.360093 CTCCCTCTATAAACAAATATAGAAGCG 57.640 37.037 5.76 0.00 41.81 4.68
794 795 8.141909 CGTGATGATACTCCCTCTATAAACAAA 58.858 37.037 0.00 0.00 0.00 2.83
795 796 7.255836 CCGTGATGATACTCCCTCTATAAACAA 60.256 40.741 0.00 0.00 0.00 2.83
796 797 6.208797 CCGTGATGATACTCCCTCTATAAACA 59.791 42.308 0.00 0.00 0.00 2.83
797 798 6.350277 CCCGTGATGATACTCCCTCTATAAAC 60.350 46.154 0.00 0.00 0.00 2.01
798 799 5.715279 CCCGTGATGATACTCCCTCTATAAA 59.285 44.000 0.00 0.00 0.00 1.40
799 800 5.014860 TCCCGTGATGATACTCCCTCTATAA 59.985 44.000 0.00 0.00 0.00 0.98
800 801 4.538891 TCCCGTGATGATACTCCCTCTATA 59.461 45.833 0.00 0.00 0.00 1.31
801 802 3.333980 TCCCGTGATGATACTCCCTCTAT 59.666 47.826 0.00 0.00 0.00 1.98
802 803 2.714793 TCCCGTGATGATACTCCCTCTA 59.285 50.000 0.00 0.00 0.00 2.43
803 804 1.499438 TCCCGTGATGATACTCCCTCT 59.501 52.381 0.00 0.00 0.00 3.69
804 805 1.996798 TCCCGTGATGATACTCCCTC 58.003 55.000 0.00 0.00 0.00 4.30
805 806 2.091278 TCTTCCCGTGATGATACTCCCT 60.091 50.000 0.00 0.00 0.00 4.20
806 807 2.317040 TCTTCCCGTGATGATACTCCC 58.683 52.381 0.00 0.00 0.00 4.30
807 808 3.492829 GGTTCTTCCCGTGATGATACTCC 60.493 52.174 0.00 0.00 0.00 3.85
808 809 3.132289 TGGTTCTTCCCGTGATGATACTC 59.868 47.826 0.00 0.00 34.77 2.59
809 810 3.104512 TGGTTCTTCCCGTGATGATACT 58.895 45.455 0.00 0.00 34.77 2.12
810 811 3.132289 TCTGGTTCTTCCCGTGATGATAC 59.868 47.826 0.00 0.00 34.77 2.24
811 812 3.371034 TCTGGTTCTTCCCGTGATGATA 58.629 45.455 0.00 0.00 34.77 2.15
812 813 2.169352 CTCTGGTTCTTCCCGTGATGAT 59.831 50.000 0.00 0.00 34.77 2.45
813 814 1.550524 CTCTGGTTCTTCCCGTGATGA 59.449 52.381 0.00 0.00 34.77 2.92
814 815 1.276421 ACTCTGGTTCTTCCCGTGATG 59.724 52.381 0.00 0.00 34.77 3.07
815 816 1.276421 CACTCTGGTTCTTCCCGTGAT 59.724 52.381 0.00 0.00 33.04 3.06
816 817 0.679505 CACTCTGGTTCTTCCCGTGA 59.320 55.000 0.00 0.00 33.04 4.35
820 821 0.966920 TCGTCACTCTGGTTCTTCCC 59.033 55.000 0.00 0.00 34.77 3.97
829 830 2.057316 CTGCTCAGTTTCGTCACTCTG 58.943 52.381 0.00 0.00 0.00 3.35
834 835 1.681264 TCTGTCTGCTCAGTTTCGTCA 59.319 47.619 0.00 0.00 36.85 4.35
835 836 2.030717 TCTCTGTCTGCTCAGTTTCGTC 60.031 50.000 0.00 0.00 36.85 4.20
837 838 2.713895 TCTCTGTCTGCTCAGTTTCG 57.286 50.000 0.00 0.00 36.85 3.46
838 839 3.988819 AGTTCTCTGTCTGCTCAGTTTC 58.011 45.455 0.00 0.00 36.85 2.78
1359 1363 4.084013 CCGATCCAACAAGTGTTTCACTAC 60.084 45.833 2.80 0.00 44.62 2.73
1476 1480 2.930040 CCTGAACATGTCGCTAAATCGT 59.070 45.455 0.00 0.00 0.00 3.73
1586 1659 2.540265 CATCTAGATGTGCCCTGGAC 57.460 55.000 22.42 0.00 34.23 4.02
1606 1679 6.356556 ACTTAGATGTGCAATAACTATGGCA 58.643 36.000 0.00 0.00 40.19 4.92
1607 1680 6.867662 ACTTAGATGTGCAATAACTATGGC 57.132 37.500 0.00 0.00 33.16 4.40
1608 1681 9.547753 AGTTACTTAGATGTGCAATAACTATGG 57.452 33.333 0.00 0.00 31.39 2.74
1617 1690 8.450964 GCTTGATTAAGTTACTTAGATGTGCAA 58.549 33.333 4.94 4.76 36.27 4.08
1618 1691 7.606073 TGCTTGATTAAGTTACTTAGATGTGCA 59.394 33.333 14.73 14.73 36.27 4.57
1619 1692 7.974675 TGCTTGATTAAGTTACTTAGATGTGC 58.025 34.615 4.94 8.97 36.27 4.57
1688 1764 6.507900 AGTCCTGTATCATTGATCTTACACG 58.492 40.000 1.55 0.00 0.00 4.49
1940 2019 2.416836 CGGACATGGCTCTTACGAAAGA 60.417 50.000 0.00 0.00 39.47 2.52
1958 2037 6.092122 CACAGAAACTATTGTCATTTAGCGGA 59.908 38.462 0.00 0.00 0.00 5.54
2246 2395 2.803133 GCCTGGAAGCAAAAGAACAACC 60.803 50.000 0.00 0.00 0.00 3.77
2259 2411 1.101331 GAAGAAGCATGGCCTGGAAG 58.899 55.000 3.32 0.00 0.00 3.46
2398 5936 8.716646 AATCCAAAAACCAAAAGAGTAAACTG 57.283 30.769 0.00 0.00 0.00 3.16
2853 6419 2.887152 AGAAAGCAGCCAGTTTACCTTG 59.113 45.455 0.00 0.00 0.00 3.61
3023 6616 3.256704 ACCAGACCCACCTGAAATAAGA 58.743 45.455 0.00 0.00 36.29 2.10
3252 6886 9.757227 GAGCATGAGTTCTACTTATAATTGAGT 57.243 33.333 0.00 0.00 0.00 3.41
3307 6941 1.079503 GCAGGTGTGAACGGAGAATC 58.920 55.000 0.00 0.00 0.00 2.52
3315 6949 1.808945 CAAGGAGATGCAGGTGTGAAC 59.191 52.381 0.00 0.00 0.00 3.18
3592 7324 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3594 7326 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
3595 7327 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
3597 7329 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
3598 7330 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
3599 7331 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
3626 7358 6.568081 AGAGCGTTTCTTACACTACACTAGTG 60.568 42.308 21.44 21.44 46.76 2.74
3627 7359 5.472820 AGAGCGTTTCTTACACTACACTAGT 59.527 40.000 0.00 0.00 33.62 2.57
3628 7360 5.940595 AGAGCGTTTCTTACACTACACTAG 58.059 41.667 0.00 0.00 29.61 2.57
3629 7361 5.954296 AGAGCGTTTCTTACACTACACTA 57.046 39.130 0.00 0.00 29.61 2.74
3630 7362 4.850347 AGAGCGTTTCTTACACTACACT 57.150 40.909 0.00 0.00 29.61 3.55
3641 7373 6.157211 CGTCCCATAATATAAGAGCGTTTCT 58.843 40.000 0.00 0.00 37.93 2.52
3642 7374 5.347907 CCGTCCCATAATATAAGAGCGTTTC 59.652 44.000 0.00 0.00 0.00 2.78
3643 7375 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
3644 7376 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3645 7377 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
3646 7378 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3647 7379 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3648 7380 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3649 7381 5.279562 TCCCTCCGTCCCATAATATAAGA 57.720 43.478 0.00 0.00 0.00 2.10
3650 7382 6.561519 AATCCCTCCGTCCCATAATATAAG 57.438 41.667 0.00 0.00 0.00 1.73
3651 7383 8.632731 AATAATCCCTCCGTCCCATAATATAA 57.367 34.615 0.00 0.00 0.00 0.98
3652 7384 9.907819 ATAATAATCCCTCCGTCCCATAATATA 57.092 33.333 0.00 0.00 0.00 0.86
3653 7385 8.814448 ATAATAATCCCTCCGTCCCATAATAT 57.186 34.615 0.00 0.00 0.00 1.28
3654 7386 7.847335 TGATAATAATCCCTCCGTCCCATAATA 59.153 37.037 0.00 0.00 0.00 0.98
3655 7387 6.676632 TGATAATAATCCCTCCGTCCCATAAT 59.323 38.462 0.00 0.00 0.00 1.28
3656 7388 6.026834 TGATAATAATCCCTCCGTCCCATAA 58.973 40.000 0.00 0.00 0.00 1.90
3657 7389 5.595770 TGATAATAATCCCTCCGTCCCATA 58.404 41.667 0.00 0.00 0.00 2.74
3658 7390 4.435137 TGATAATAATCCCTCCGTCCCAT 58.565 43.478 0.00 0.00 0.00 4.00
3659 7391 3.838317 CTGATAATAATCCCTCCGTCCCA 59.162 47.826 0.00 0.00 0.00 4.37
3660 7392 3.838903 ACTGATAATAATCCCTCCGTCCC 59.161 47.826 0.00 0.00 0.00 4.46
3661 7393 4.283722 ACACTGATAATAATCCCTCCGTCC 59.716 45.833 0.00 0.00 0.00 4.79
3662 7394 5.470047 ACACTGATAATAATCCCTCCGTC 57.530 43.478 0.00 0.00 0.00 4.79
3663 7395 5.888982 AACACTGATAATAATCCCTCCGT 57.111 39.130 0.00 0.00 0.00 4.69
3664 7396 8.671384 TTTAAACACTGATAATAATCCCTCCG 57.329 34.615 0.00 0.00 0.00 4.63
3673 7405 9.693739 ACCCACATGATTTAAACACTGATAATA 57.306 29.630 0.00 0.00 0.00 0.98
3674 7406 8.593945 ACCCACATGATTTAAACACTGATAAT 57.406 30.769 0.00 0.00 0.00 1.28
3675 7407 8.415950 AACCCACATGATTTAAACACTGATAA 57.584 30.769 0.00 0.00 0.00 1.75
3676 7408 8.303156 CAAACCCACATGATTTAAACACTGATA 58.697 33.333 0.00 0.00 0.00 2.15
3677 7409 6.916360 AACCCACATGATTTAAACACTGAT 57.084 33.333 0.00 0.00 0.00 2.90
3678 7410 6.322456 TCAAACCCACATGATTTAAACACTGA 59.678 34.615 0.00 0.00 0.00 3.41
3679 7411 6.511416 TCAAACCCACATGATTTAAACACTG 58.489 36.000 0.00 0.00 0.00 3.66
3680 7412 6.723298 TCAAACCCACATGATTTAAACACT 57.277 33.333 0.00 0.00 0.00 3.55
3681 7413 7.961325 AATCAAACCCACATGATTTAAACAC 57.039 32.000 0.00 0.00 42.12 3.32
3784 7525 7.449704 GGGCATATCATAACCAAGAGAAGATTT 59.550 37.037 0.00 0.00 0.00 2.17
3787 7528 5.608437 AGGGCATATCATAACCAAGAGAAGA 59.392 40.000 0.00 0.00 0.00 2.87
3790 7531 8.860517 ATATAGGGCATATCATAACCAAGAGA 57.139 34.615 0.00 0.00 0.00 3.10
3796 7540 9.331282 GACAAGAATATAGGGCATATCATAACC 57.669 37.037 0.00 0.00 0.00 2.85
3869 7617 0.321919 TGCTGCTCCATGACCAACTC 60.322 55.000 0.00 0.00 0.00 3.01
3891 8441 9.448438 AGTATACAATCATGTCAAAGCTAAACA 57.552 29.630 5.50 0.00 41.05 2.83
4130 8824 2.419436 CCACAAGCACCGGTATGATACA 60.419 50.000 6.87 0.00 0.00 2.29
4525 9404 4.219115 TGCACAAACTATCCCCAAAAGAA 58.781 39.130 0.00 0.00 0.00 2.52
4702 9582 4.095257 GTGGCGTTAGCAACAGGAAAAAG 61.095 47.826 0.00 0.00 46.47 2.27
4720 9600 2.048603 GTTGCTCCCAGATGGTGGC 61.049 63.158 0.00 2.59 46.45 5.01
4806 9686 4.899502 AGGTATCCTGCATAATCTTTCCG 58.100 43.478 0.00 0.00 29.57 4.30
5228 10415 5.068987 CAGAAATTCCAGAACCACCAAGAAA 59.931 40.000 0.00 0.00 0.00 2.52
5258 10445 8.449251 AACATATCCAAAAACAAAGCAACATT 57.551 26.923 0.00 0.00 0.00 2.71
5298 10485 1.270571 TGTACCATGCAGCAGAACGAA 60.271 47.619 0.00 0.00 0.00 3.85
5421 10613 2.363147 GCCTGAGGACGAGGAGGT 60.363 66.667 0.65 0.00 31.48 3.85
5490 10682 1.699634 GGATAAGGTCCAGGCTGCATA 59.300 52.381 9.56 0.00 46.96 3.14
6090 11324 1.522668 GCTGTGTATGTGGAGCAACA 58.477 50.000 0.00 0.00 0.00 3.33
6158 11402 2.902343 GCGGAGGCTGCCCATAAC 60.902 66.667 16.57 2.06 35.83 1.89
6224 11469 0.184451 CCCATAACCAGCCTGAGCAT 59.816 55.000 0.00 0.00 43.56 3.79
6432 11684 4.697756 GTGGTAGGCGCAGGTGCA 62.698 66.667 10.83 0.00 42.21 4.57
6534 11792 1.344114 GCCAAGGAAACCAGATTGCAA 59.656 47.619 0.00 0.00 0.00 4.08
6706 11969 7.178274 TGCAATTCAGTATCCAAACCAAGTATT 59.822 33.333 0.00 0.00 0.00 1.89
6834 12108 9.381033 ACAATGTGAAAACATCAAATGAAAGAA 57.619 25.926 0.00 0.00 40.50 2.52
6871 12145 1.001378 AGCCGAACAATGAAACAGTGC 60.001 47.619 0.00 0.00 32.35 4.40
6885 12159 1.525765 TGCAAGAACAGCAGCCGAA 60.526 52.632 0.00 0.00 37.02 4.30
6888 12163 2.253452 CGTGCAAGAACAGCAGCC 59.747 61.111 0.00 0.00 43.63 4.85
6935 12225 4.082571 ACCTGCATGCTAAAATGAGTGAAC 60.083 41.667 20.33 0.00 0.00 3.18
6936 12226 4.081406 ACCTGCATGCTAAAATGAGTGAA 58.919 39.130 20.33 0.00 0.00 3.18
6937 12227 3.689347 ACCTGCATGCTAAAATGAGTGA 58.311 40.909 20.33 0.00 0.00 3.41
6938 12228 4.082625 TGAACCTGCATGCTAAAATGAGTG 60.083 41.667 20.33 3.03 0.00 3.51
6939 12229 4.081406 TGAACCTGCATGCTAAAATGAGT 58.919 39.130 20.33 1.74 0.00 3.41
6940 12230 4.157289 AGTGAACCTGCATGCTAAAATGAG 59.843 41.667 20.33 5.57 0.00 2.90
6941 12231 4.081406 AGTGAACCTGCATGCTAAAATGA 58.919 39.130 20.33 0.00 0.00 2.57
6942 12232 4.082625 TGAGTGAACCTGCATGCTAAAATG 60.083 41.667 20.33 3.39 0.00 2.32
6943 12233 4.081406 TGAGTGAACCTGCATGCTAAAAT 58.919 39.130 20.33 1.01 0.00 1.82
6944 12234 3.485394 TGAGTGAACCTGCATGCTAAAA 58.515 40.909 20.33 0.00 0.00 1.52
6945 12235 3.138884 TGAGTGAACCTGCATGCTAAA 57.861 42.857 20.33 0.00 0.00 1.85
6946 12236 2.857186 TGAGTGAACCTGCATGCTAA 57.143 45.000 20.33 0.00 0.00 3.09
6947 12237 3.354948 AATGAGTGAACCTGCATGCTA 57.645 42.857 20.33 4.40 0.00 3.49
6948 12238 2.211250 AATGAGTGAACCTGCATGCT 57.789 45.000 20.33 0.00 0.00 3.79
6949 12239 2.991190 CAAAATGAGTGAACCTGCATGC 59.009 45.455 11.82 11.82 0.00 4.06
6950 12240 2.991190 GCAAAATGAGTGAACCTGCATG 59.009 45.455 0.00 0.00 0.00 4.06
6951 12241 2.895404 AGCAAAATGAGTGAACCTGCAT 59.105 40.909 0.00 0.00 0.00 3.96
6952 12242 2.309613 AGCAAAATGAGTGAACCTGCA 58.690 42.857 0.00 0.00 0.00 4.41
6953 12243 4.503741 TTAGCAAAATGAGTGAACCTGC 57.496 40.909 0.00 0.00 0.00 4.85
6954 12244 7.168135 GTCTTTTTAGCAAAATGAGTGAACCTG 59.832 37.037 8.91 0.00 35.87 4.00
6955 12245 7.068716 AGTCTTTTTAGCAAAATGAGTGAACCT 59.931 33.333 12.48 4.77 37.04 3.50
6956 12246 7.203218 AGTCTTTTTAGCAAAATGAGTGAACC 58.797 34.615 12.48 3.36 37.04 3.62
6957 12247 8.634475 AAGTCTTTTTAGCAAAATGAGTGAAC 57.366 30.769 13.30 4.61 37.89 3.18
6985 12275 7.095183 TCCTATATACTCCCTCCGTAAAGAA 57.905 40.000 0.00 0.00 0.00 2.52
7066 12405 3.055591 CAAGATCGATCTGGACGGATTG 58.944 50.000 27.93 15.65 37.19 2.67
7186 12526 6.327279 TGGATGTATAGATGTCGGTAACAG 57.673 41.667 0.00 0.00 42.37 3.16
7223 12563 6.529829 GGAAACAGCATAATGATACGCAAAAA 59.470 34.615 0.00 0.00 0.00 1.94
7228 12568 4.752101 AGAGGAAACAGCATAATGATACGC 59.248 41.667 0.00 0.00 0.00 4.42
7231 12851 8.579850 AACAAAGAGGAAACAGCATAATGATA 57.420 30.769 0.00 0.00 0.00 2.15
7322 12966 7.770201 TGAACATTCTGAACAAAAGAACATGA 58.230 30.769 0.00 0.00 36.52 3.07
7326 12970 9.567848 TTAACTGAACATTCTGAACAAAAGAAC 57.432 29.630 5.61 0.00 36.52 3.01
7328 12972 9.567848 GTTTAACTGAACATTCTGAACAAAAGA 57.432 29.630 5.61 0.00 0.00 2.52
7329 12973 9.573133 AGTTTAACTGAACATTCTGAACAAAAG 57.427 29.630 0.00 0.00 31.94 2.27
7330 12974 9.567848 GAGTTTAACTGAACATTCTGAACAAAA 57.432 29.630 0.93 0.00 31.94 2.44
7331 12975 8.735315 TGAGTTTAACTGAACATTCTGAACAAA 58.265 29.630 0.93 1.13 31.94 2.83
7332 12976 8.275015 TGAGTTTAACTGAACATTCTGAACAA 57.725 30.769 0.93 0.00 31.94 2.83
7333 12977 7.467267 GCTGAGTTTAACTGAACATTCTGAACA 60.467 37.037 0.93 0.00 31.94 3.18
7334 12978 6.853362 GCTGAGTTTAACTGAACATTCTGAAC 59.147 38.462 0.93 0.97 31.94 3.18
7335 12979 6.767902 AGCTGAGTTTAACTGAACATTCTGAA 59.232 34.615 0.93 0.00 31.94 3.02
7336 12980 6.203530 CAGCTGAGTTTAACTGAACATTCTGA 59.796 38.462 8.42 0.00 31.67 3.27
7337 12981 6.203530 TCAGCTGAGTTTAACTGAACATTCTG 59.796 38.462 13.74 5.59 36.27 3.02
7338 12982 6.291377 TCAGCTGAGTTTAACTGAACATTCT 58.709 36.000 13.74 0.00 36.27 2.40
7339 12983 6.425114 TCTCAGCTGAGTTTAACTGAACATTC 59.575 38.462 36.32 0.00 42.60 2.67
7340 12984 6.291377 TCTCAGCTGAGTTTAACTGAACATT 58.709 36.000 36.32 0.00 42.60 2.71
7341 12985 5.858381 TCTCAGCTGAGTTTAACTGAACAT 58.142 37.500 36.32 0.00 42.60 2.71
7342 12986 5.276461 TCTCAGCTGAGTTTAACTGAACA 57.724 39.130 36.32 15.16 42.60 3.18
7343 12987 5.390356 GCATCTCAGCTGAGTTTAACTGAAC 60.390 44.000 36.32 15.45 42.60 3.18
7344 12988 4.692625 GCATCTCAGCTGAGTTTAACTGAA 59.307 41.667 36.32 18.86 42.60 3.02
7345 12989 4.248859 GCATCTCAGCTGAGTTTAACTGA 58.751 43.478 36.32 19.71 42.60 3.41
7346 12990 3.061831 CGCATCTCAGCTGAGTTTAACTG 59.938 47.826 36.32 24.95 42.60 3.16
7347 12991 3.257393 CGCATCTCAGCTGAGTTTAACT 58.743 45.455 36.32 16.57 42.60 2.24
7348 12992 2.349886 CCGCATCTCAGCTGAGTTTAAC 59.650 50.000 36.32 22.90 42.60 2.01
7349 12993 2.028112 ACCGCATCTCAGCTGAGTTTAA 60.028 45.455 36.32 21.94 42.60 1.52
7350 12994 1.550524 ACCGCATCTCAGCTGAGTTTA 59.449 47.619 36.32 22.29 42.60 2.01
7351 12995 0.322975 ACCGCATCTCAGCTGAGTTT 59.677 50.000 36.32 24.74 42.60 2.66
7352 12996 0.322975 AACCGCATCTCAGCTGAGTT 59.677 50.000 36.32 28.24 42.60 3.01
7353 12997 0.108424 GAACCGCATCTCAGCTGAGT 60.108 55.000 36.32 23.73 42.60 3.41
7354 12998 0.108472 TGAACCGCATCTCAGCTGAG 60.108 55.000 33.73 33.73 43.36 3.35
7355 12999 0.538584 ATGAACCGCATCTCAGCTGA 59.461 50.000 17.19 17.19 28.85 4.26
7356 13000 0.656259 CATGAACCGCATCTCAGCTG 59.344 55.000 7.63 7.63 34.15 4.24
7357 13001 0.251354 ACATGAACCGCATCTCAGCT 59.749 50.000 0.00 0.00 34.15 4.24
7358 13002 1.863454 CTACATGAACCGCATCTCAGC 59.137 52.381 0.00 0.00 34.15 4.26
7359 13003 3.443099 TCTACATGAACCGCATCTCAG 57.557 47.619 0.00 0.00 34.15 3.35
7360 13004 3.885724 TTCTACATGAACCGCATCTCA 57.114 42.857 0.00 0.00 34.15 3.27
7361 13005 4.201822 GGTTTTCTACATGAACCGCATCTC 60.202 45.833 0.00 0.00 34.15 2.75
7362 13006 3.689649 GGTTTTCTACATGAACCGCATCT 59.310 43.478 0.00 0.00 34.15 2.90
7363 13007 4.016113 GGTTTTCTACATGAACCGCATC 57.984 45.455 0.00 0.00 34.15 3.91
7368 13012 3.404899 TCCACGGTTTTCTACATGAACC 58.595 45.455 0.00 0.90 39.50 3.62
7369 13013 3.120304 GCTCCACGGTTTTCTACATGAAC 60.120 47.826 0.00 0.00 33.88 3.18
7370 13014 3.071479 GCTCCACGGTTTTCTACATGAA 58.929 45.455 0.00 0.00 0.00 2.57
7371 13015 2.037902 TGCTCCACGGTTTTCTACATGA 59.962 45.455 0.00 0.00 0.00 3.07
7372 13016 2.159627 GTGCTCCACGGTTTTCTACATG 59.840 50.000 0.00 0.00 0.00 3.21
7373 13017 2.038557 AGTGCTCCACGGTTTTCTACAT 59.961 45.455 0.00 0.00 39.64 2.29
7374 13018 1.414919 AGTGCTCCACGGTTTTCTACA 59.585 47.619 0.00 0.00 39.64 2.74
7375 13019 2.165319 AGTGCTCCACGGTTTTCTAC 57.835 50.000 0.00 0.00 39.64 2.59
7376 13020 2.922740 AAGTGCTCCACGGTTTTCTA 57.077 45.000 0.00 0.00 39.64 2.10
7377 13021 2.052782 AAAGTGCTCCACGGTTTTCT 57.947 45.000 0.00 0.00 39.64 2.52
7378 13022 2.098443 TGAAAAGTGCTCCACGGTTTTC 59.902 45.455 12.25 12.25 38.17 2.29
7379 13023 2.096248 TGAAAAGTGCTCCACGGTTTT 58.904 42.857 0.00 0.00 39.64 2.43
7380 13024 1.676006 CTGAAAAGTGCTCCACGGTTT 59.324 47.619 0.00 0.00 39.64 3.27
7381 13025 1.308998 CTGAAAAGTGCTCCACGGTT 58.691 50.000 0.00 0.00 39.64 4.44
7382 13026 0.180406 ACTGAAAAGTGCTCCACGGT 59.820 50.000 0.00 0.00 39.64 4.83
7383 13027 1.308998 AACTGAAAAGTGCTCCACGG 58.691 50.000 0.00 0.00 39.64 4.94
7384 13028 3.420839 AAAACTGAAAAGTGCTCCACG 57.579 42.857 0.00 0.00 39.64 4.94
7385 13029 5.009610 TCCATAAAACTGAAAAGTGCTCCAC 59.990 40.000 0.00 0.00 34.10 4.02
7386 13030 5.009610 GTCCATAAAACTGAAAAGTGCTCCA 59.990 40.000 0.00 0.00 0.00 3.86
7387 13031 5.241728 AGTCCATAAAACTGAAAAGTGCTCC 59.758 40.000 0.00 0.00 0.00 4.70
7388 13032 6.145535 CAGTCCATAAAACTGAAAAGTGCTC 58.854 40.000 0.00 0.00 45.64 4.26
7389 13033 5.594317 ACAGTCCATAAAACTGAAAAGTGCT 59.406 36.000 10.04 0.00 45.64 4.40
7390 13034 5.831997 ACAGTCCATAAAACTGAAAAGTGC 58.168 37.500 10.04 0.00 45.64 4.40
7391 13035 8.783093 TGATACAGTCCATAAAACTGAAAAGTG 58.217 33.333 10.04 0.00 45.64 3.16
7392 13036 8.784043 GTGATACAGTCCATAAAACTGAAAAGT 58.216 33.333 10.04 0.00 45.64 2.66
7393 13037 7.957484 CGTGATACAGTCCATAAAACTGAAAAG 59.043 37.037 10.04 0.00 45.64 2.27
7394 13038 7.658167 TCGTGATACAGTCCATAAAACTGAAAA 59.342 33.333 10.04 0.00 45.64 2.29
7395 13039 7.117236 GTCGTGATACAGTCCATAAAACTGAAA 59.883 37.037 10.04 0.00 45.64 2.69
7396 13040 6.588756 GTCGTGATACAGTCCATAAAACTGAA 59.411 38.462 10.04 0.00 45.64 3.02
7397 13041 6.097356 GTCGTGATACAGTCCATAAAACTGA 58.903 40.000 10.04 0.00 45.64 3.41
7399 13043 5.187186 AGGTCGTGATACAGTCCATAAAACT 59.813 40.000 0.00 0.00 0.00 2.66
7400 13044 5.291128 CAGGTCGTGATACAGTCCATAAAAC 59.709 44.000 0.00 0.00 0.00 2.43
7401 13045 5.186215 TCAGGTCGTGATACAGTCCATAAAA 59.814 40.000 0.00 0.00 0.00 1.52
7402 13046 4.707934 TCAGGTCGTGATACAGTCCATAAA 59.292 41.667 0.00 0.00 0.00 1.40
7403 13047 4.274978 TCAGGTCGTGATACAGTCCATAA 58.725 43.478 0.00 0.00 0.00 1.90
7404 13048 3.883489 CTCAGGTCGTGATACAGTCCATA 59.117 47.826 0.00 0.00 33.51 2.74
7405 13049 2.690497 CTCAGGTCGTGATACAGTCCAT 59.310 50.000 0.00 0.00 33.51 3.41
7406 13050 2.092323 CTCAGGTCGTGATACAGTCCA 58.908 52.381 0.00 0.00 33.51 4.02
7407 13051 2.097791 GTCTCAGGTCGTGATACAGTCC 59.902 54.545 6.27 0.00 33.43 3.85
7408 13052 2.747989 TGTCTCAGGTCGTGATACAGTC 59.252 50.000 9.05 0.00 37.35 3.51
7409 13053 2.791655 TGTCTCAGGTCGTGATACAGT 58.208 47.619 9.05 0.00 37.35 3.55
7411 13055 2.791655 ACTGTCTCAGGTCGTGATACA 58.208 47.619 11.75 11.75 39.34 2.29
7412 13056 3.688185 TGTACTGTCTCAGGTCGTGATAC 59.312 47.826 4.57 4.57 35.51 2.24
7413 13057 3.946606 TGTACTGTCTCAGGTCGTGATA 58.053 45.455 0.00 0.00 35.51 2.15
7414 13058 2.791655 TGTACTGTCTCAGGTCGTGAT 58.208 47.619 0.00 0.00 35.51 3.06
7415 13059 2.265589 TGTACTGTCTCAGGTCGTGA 57.734 50.000 0.00 0.00 35.51 4.35
7416 13060 2.293677 AGTTGTACTGTCTCAGGTCGTG 59.706 50.000 0.00 0.00 35.51 4.35
7417 13061 2.293677 CAGTTGTACTGTCTCAGGTCGT 59.706 50.000 0.00 0.00 41.19 4.34
7418 13062 2.351835 CCAGTTGTACTGTCTCAGGTCG 60.352 54.545 6.13 0.00 44.50 4.79
7419 13063 2.891580 TCCAGTTGTACTGTCTCAGGTC 59.108 50.000 6.13 0.00 44.50 3.85
7420 13064 2.894126 CTCCAGTTGTACTGTCTCAGGT 59.106 50.000 6.13 0.00 44.50 4.00
7421 13065 3.157881 TCTCCAGTTGTACTGTCTCAGG 58.842 50.000 6.13 0.00 44.50 3.86
7422 13066 4.855715 TTCTCCAGTTGTACTGTCTCAG 57.144 45.455 6.13 0.00 44.50 3.35
7423 13067 4.832823 TGATTCTCCAGTTGTACTGTCTCA 59.167 41.667 6.13 0.02 44.50 3.27
7424 13068 5.392767 TGATTCTCCAGTTGTACTGTCTC 57.607 43.478 6.13 0.00 44.50 3.36
7425 13069 6.365970 AATGATTCTCCAGTTGTACTGTCT 57.634 37.500 6.13 0.00 44.50 3.41
7426 13070 5.582665 GGAATGATTCTCCAGTTGTACTGTC 59.417 44.000 5.03 0.00 44.50 3.51
7427 13071 5.013079 TGGAATGATTCTCCAGTTGTACTGT 59.987 40.000 5.03 0.00 44.50 3.55
7428 13072 5.491070 TGGAATGATTCTCCAGTTGTACTG 58.509 41.667 5.03 0.00 45.53 2.74
7429 13073 5.762179 TGGAATGATTCTCCAGTTGTACT 57.238 39.130 5.03 0.00 38.07 2.73
7430 13074 6.431234 AGTTTGGAATGATTCTCCAGTTGTAC 59.569 38.462 5.03 0.00 43.79 2.90
7431 13075 6.542821 AGTTTGGAATGATTCTCCAGTTGTA 58.457 36.000 5.03 0.00 43.79 2.41
7432 13076 5.388654 AGTTTGGAATGATTCTCCAGTTGT 58.611 37.500 5.03 0.00 43.79 3.32
7433 13077 5.105997 GGAGTTTGGAATGATTCTCCAGTTG 60.106 44.000 5.03 0.00 43.79 3.16
7434 13078 5.012893 GGAGTTTGGAATGATTCTCCAGTT 58.987 41.667 5.03 0.00 43.79 3.16
7435 13079 4.043310 TGGAGTTTGGAATGATTCTCCAGT 59.957 41.667 8.51 0.00 43.79 4.00
7436 13080 4.592942 TGGAGTTTGGAATGATTCTCCAG 58.407 43.478 8.51 0.00 43.79 3.86
7437 13081 4.043310 AGTGGAGTTTGGAATGATTCTCCA 59.957 41.667 8.51 8.51 45.76 3.86
7438 13082 4.593956 AGTGGAGTTTGGAATGATTCTCC 58.406 43.478 5.03 4.48 41.00 3.71
7439 13083 8.207545 AGTATAGTGGAGTTTGGAATGATTCTC 58.792 37.037 5.03 0.00 0.00 2.87
7440 13084 7.989741 CAGTATAGTGGAGTTTGGAATGATTCT 59.010 37.037 5.03 0.00 0.00 2.40
7441 13085 7.254932 GCAGTATAGTGGAGTTTGGAATGATTC 60.255 40.741 9.60 0.00 0.00 2.52
7442 13086 6.543831 GCAGTATAGTGGAGTTTGGAATGATT 59.456 38.462 9.60 0.00 0.00 2.57
7443 13087 6.058183 GCAGTATAGTGGAGTTTGGAATGAT 58.942 40.000 9.60 0.00 0.00 2.45
7444 13088 5.189736 AGCAGTATAGTGGAGTTTGGAATGA 59.810 40.000 9.60 0.00 0.00 2.57
7445 13089 5.431765 AGCAGTATAGTGGAGTTTGGAATG 58.568 41.667 9.60 0.00 0.00 2.67
7446 13090 5.396884 GGAGCAGTATAGTGGAGTTTGGAAT 60.397 44.000 9.60 0.00 0.00 3.01
7447 13091 4.081087 GGAGCAGTATAGTGGAGTTTGGAA 60.081 45.833 9.60 0.00 0.00 3.53
7448 13092 3.451178 GGAGCAGTATAGTGGAGTTTGGA 59.549 47.826 9.60 0.00 0.00 3.53
7449 13093 3.452627 AGGAGCAGTATAGTGGAGTTTGG 59.547 47.826 9.60 0.00 0.00 3.28
7450 13094 4.744795 AGGAGCAGTATAGTGGAGTTTG 57.255 45.455 9.60 0.00 0.00 2.93
7451 13095 5.763876 AAAGGAGCAGTATAGTGGAGTTT 57.236 39.130 9.60 0.00 0.00 2.66
7452 13096 5.763876 AAAAGGAGCAGTATAGTGGAGTT 57.236 39.130 9.60 0.00 0.00 3.01
7453 13097 5.338463 GGAAAAAGGAGCAGTATAGTGGAGT 60.338 44.000 9.60 0.00 0.00 3.85
7454 13098 5.119694 GGAAAAAGGAGCAGTATAGTGGAG 58.880 45.833 9.60 0.00 0.00 3.86
7455 13099 4.382685 CGGAAAAAGGAGCAGTATAGTGGA 60.383 45.833 9.60 0.00 0.00 4.02
7456 13100 3.871594 CGGAAAAAGGAGCAGTATAGTGG 59.128 47.826 9.60 0.00 0.00 4.00
7457 13101 4.330074 CACGGAAAAAGGAGCAGTATAGTG 59.670 45.833 2.97 2.97 0.00 2.74
7458 13102 4.222145 TCACGGAAAAAGGAGCAGTATAGT 59.778 41.667 0.00 0.00 0.00 2.12
7459 13103 4.755411 TCACGGAAAAAGGAGCAGTATAG 58.245 43.478 0.00 0.00 0.00 1.31
7460 13104 4.382685 CCTCACGGAAAAAGGAGCAGTATA 60.383 45.833 0.00 0.00 31.44 1.47
7461 13105 3.600388 CTCACGGAAAAAGGAGCAGTAT 58.400 45.455 0.00 0.00 0.00 2.12
7462 13106 2.289444 CCTCACGGAAAAAGGAGCAGTA 60.289 50.000 0.00 0.00 31.44 2.74
7463 13107 1.543429 CCTCACGGAAAAAGGAGCAGT 60.543 52.381 0.00 0.00 31.44 4.40
7464 13108 1.160137 CCTCACGGAAAAAGGAGCAG 58.840 55.000 0.00 0.00 31.44 4.24
7465 13109 0.250727 CCCTCACGGAAAAAGGAGCA 60.251 55.000 0.00 0.00 31.44 4.26
7466 13110 0.960861 CCCCTCACGGAAAAAGGAGC 60.961 60.000 0.00 0.00 31.44 4.70
7467 13111 0.960861 GCCCCTCACGGAAAAAGGAG 60.961 60.000 0.00 0.00 31.44 3.69
7468 13112 1.074248 GCCCCTCACGGAAAAAGGA 59.926 57.895 0.00 0.00 31.44 3.36
7469 13113 0.611896 ATGCCCCTCACGGAAAAAGG 60.612 55.000 0.00 0.00 0.00 3.11
7470 13114 1.067635 CAATGCCCCTCACGGAAAAAG 60.068 52.381 0.00 0.00 0.00 2.27
7471 13115 0.965439 CAATGCCCCTCACGGAAAAA 59.035 50.000 0.00 0.00 0.00 1.94
7472 13116 1.531739 GCAATGCCCCTCACGGAAAA 61.532 55.000 0.00 0.00 0.00 2.29
7473 13117 1.976474 GCAATGCCCCTCACGGAAA 60.976 57.895 0.00 0.00 0.00 3.13
7474 13118 2.361104 GCAATGCCCCTCACGGAA 60.361 61.111 0.00 0.00 0.00 4.30
7475 13119 3.329542 GAGCAATGCCCCTCACGGA 62.330 63.158 0.00 0.00 0.00 4.69
7476 13120 2.825836 GAGCAATGCCCCTCACGG 60.826 66.667 0.00 0.00 0.00 4.94
7477 13121 2.110967 CAGAGCAATGCCCCTCACG 61.111 63.158 0.00 0.00 0.00 4.35
7478 13122 0.610232 AACAGAGCAATGCCCCTCAC 60.610 55.000 0.00 0.00 0.00 3.51
7479 13123 0.112995 AAACAGAGCAATGCCCCTCA 59.887 50.000 0.00 0.00 0.00 3.86
7480 13124 1.067354 CAAAACAGAGCAATGCCCCTC 60.067 52.381 0.00 0.00 0.00 4.30
7481 13125 0.971386 CAAAACAGAGCAATGCCCCT 59.029 50.000 0.00 0.00 0.00 4.79
7482 13126 0.968405 TCAAAACAGAGCAATGCCCC 59.032 50.000 0.00 0.00 0.00 5.80
7483 13127 2.680577 CTTCAAAACAGAGCAATGCCC 58.319 47.619 0.00 0.00 0.00 5.36
7484 13128 2.064014 GCTTCAAAACAGAGCAATGCC 58.936 47.619 0.00 0.00 0.00 4.40
7485 13129 2.746269 TGCTTCAAAACAGAGCAATGC 58.254 42.857 0.00 0.00 32.17 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.