Multiple sequence alignment - TraesCS6D01G174400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G174400 chr6D 100.000 5002 0 0 1 5002 163829613 163834614 0.000000e+00 9238.0
1 TraesCS6D01G174400 chr6D 100.000 2979 0 0 5294 8272 163834906 163837884 0.000000e+00 5502.0
2 TraesCS6D01G174400 chr6D 76.774 310 47 11 6862 7160 57784192 57784487 5.170000e-32 150.0
3 TraesCS6D01G174400 chr6D 88.889 108 9 1 1676 1780 230786420 230786313 6.740000e-26 130.0
4 TraesCS6D01G174400 chr6A 97.269 2966 35 8 5328 8272 258140081 258143021 0.000000e+00 4987.0
5 TraesCS6D01G174400 chr6A 97.419 2247 40 4 655 2900 258132407 258134636 0.000000e+00 3812.0
6 TraesCS6D01G174400 chr6A 97.374 1980 28 5 3019 4995 258137864 258139822 0.000000e+00 3347.0
7 TraesCS6D01G174400 chr6A 88.824 170 12 2 487 656 257974725 257974887 1.410000e-47 202.0
8 TraesCS6D01G174400 chr6A 96.629 89 3 0 1330 1418 190660350 190660438 1.860000e-31 148.0
9 TraesCS6D01G174400 chr6A 96.629 89 3 0 1330 1418 190738273 190738361 1.860000e-31 148.0
10 TraesCS6D01G174400 chr6A 88.393 112 12 1 1673 1784 155803752 155803862 5.210000e-27 134.0
11 TraesCS6D01G174400 chr6B 97.962 2846 49 6 5342 8185 309751492 309748654 0.000000e+00 4926.0
12 TraesCS6D01G174400 chr6B 97.065 2351 38 7 552 2901 309756117 309753797 0.000000e+00 3930.0
13 TraesCS6D01G174400 chr6B 97.113 1940 33 5 3019 4953 309753769 309751848 0.000000e+00 3251.0
14 TraesCS6D01G174400 chr6B 96.296 81 3 0 8190 8270 309746121 309746041 5.210000e-27 134.0
15 TraesCS6D01G174400 chr6B 78.082 219 36 6 6952 7160 129681095 129681311 2.420000e-25 128.0
16 TraesCS6D01G174400 chr6B 100.000 30 0 0 461 490 413914614 413914585 1.000000e-03 56.5
17 TraesCS6D01G174400 chr6B 100.000 29 0 0 459 487 2265529 2265557 4.000000e-03 54.7
18 TraesCS6D01G174400 chr1B 94.065 337 13 5 4 334 628782826 628782491 9.580000e-139 505.0
19 TraesCS6D01G174400 chr1B 98.305 118 2 0 2895 3012 33923057 33923174 3.030000e-49 207.0
20 TraesCS6D01G174400 chr1B 96.471 85 3 0 1330 1414 151363741 151363657 3.110000e-29 141.0
21 TraesCS6D01G174400 chr1B 85.075 67 4 2 3361 3421 68072713 68072779 6.930000e-06 63.9
22 TraesCS6D01G174400 chr2D 92.647 340 19 3 1 334 422511740 422512079 1.250000e-132 484.0
23 TraesCS6D01G174400 chr2D 99.138 116 1 0 2897 3012 150627604 150627489 8.410000e-50 209.0
24 TraesCS6D01G174400 chr2D 91.000 100 8 1 1321 1420 128890630 128890728 5.210000e-27 134.0
25 TraesCS6D01G174400 chr3D 92.035 339 20 5 1 333 582177370 582177707 3.500000e-128 470.0
26 TraesCS6D01G174400 chr3D 96.739 92 3 0 1329 1420 450878871 450878780 4.000000e-33 154.0
27 TraesCS6D01G174400 chr3D 93.407 91 6 0 1330 1420 250919268 250919178 1.450000e-27 135.0
28 TraesCS6D01G174400 chr3D 88.393 112 12 1 1673 1784 503778025 503778135 5.210000e-27 134.0
29 TraesCS6D01G174400 chr5A 91.445 339 22 4 2 334 426309172 426309509 7.570000e-125 459.0
30 TraesCS6D01G174400 chr5A 88.000 150 17 1 335 483 146923120 146923269 8.530000e-40 176.0
31 TraesCS6D01G174400 chr5A 78.906 256 30 13 3225 3475 39733661 39733897 1.440000e-32 152.0
32 TraesCS6D01G174400 chr5A 75.490 408 45 36 3407 3797 578111178 578110809 1.860000e-31 148.0
33 TraesCS6D01G174400 chr5A 88.073 109 12 1 1676 1784 84159393 84159286 2.420000e-25 128.0
34 TraesCS6D01G174400 chr7D 91.150 339 22 5 4 334 549292205 549291867 3.520000e-123 453.0
35 TraesCS6D01G174400 chr7D 77.074 663 94 33 3178 3797 243335272 243334625 6.190000e-86 329.0
36 TraesCS6D01G174400 chr3B 90.909 341 23 6 3 337 798619925 798620263 1.270000e-122 451.0
37 TraesCS6D01G174400 chr3B 97.959 49 1 0 551 599 373626182 373626134 1.480000e-12 86.1
38 TraesCS6D01G174400 chr4B 90.149 335 25 7 2 330 648834357 648834689 5.930000e-116 429.0
39 TraesCS6D01G174400 chr4B 89.286 168 15 3 3019 3184 21940966 21940800 3.030000e-49 207.0
40 TraesCS6D01G174400 chr7B 89.706 340 28 4 2 335 672520619 672520281 2.130000e-115 427.0
41 TraesCS6D01G174400 chr7B 78.501 507 58 23 3178 3642 218820268 218819771 1.360000e-72 285.0
42 TraesCS6D01G174400 chr7B 99.138 116 1 0 2897 3012 716963112 716962997 8.410000e-50 209.0
43 TraesCS6D01G174400 chr5B 89.851 335 26 6 5 333 17549480 17549812 2.760000e-114 424.0
44 TraesCS6D01G174400 chr5B 99.153 118 1 0 2895 3012 635092805 635092922 6.500000e-51 213.0
45 TraesCS6D01G174400 chr5B 90.769 130 12 0 3055 3184 53020299 53020428 3.070000e-39 174.0
46 TraesCS6D01G174400 chr7A 77.228 606 90 27 3225 3797 258415160 258414570 2.240000e-80 311.0
47 TraesCS6D01G174400 chr7A 88.073 109 12 1 1676 1784 26874110 26874003 2.420000e-25 128.0
48 TraesCS6D01G174400 chr7A 76.389 144 32 2 343 485 663426936 663427078 8.900000e-10 76.8
49 TraesCS6D01G174400 chr4A 98.374 123 1 1 2891 3012 317089815 317089693 1.810000e-51 215.0
50 TraesCS6D01G174400 chr4A 98.305 118 2 0 2895 3012 477497654 477497771 3.030000e-49 207.0
51 TraesCS6D01G174400 chr4A 90.000 150 14 1 3035 3184 590664545 590664397 8.470000e-45 193.0
52 TraesCS6D01G174400 chr2A 99.145 117 0 1 2896 3012 680543473 680543358 8.410000e-50 209.0
53 TraesCS6D01G174400 chr2A 98.319 119 1 1 2894 3012 447139441 447139324 3.030000e-49 207.0
54 TraesCS6D01G174400 chr2A 93.000 100 4 3 1676 1774 79162534 79162437 8.650000e-30 143.0
55 TraesCS6D01G174400 chr2A 88.073 109 12 1 1676 1784 690920983 690920876 2.420000e-25 128.0
56 TraesCS6D01G174400 chr5D 100.000 111 0 0 2902 3012 548323023 548322913 1.090000e-48 206.0
57 TraesCS6D01G174400 chr5D 89.231 130 13 1 3055 3184 50319543 50319671 2.390000e-35 161.0
58 TraesCS6D01G174400 chr3A 90.728 151 14 0 335 485 546619669 546619519 1.410000e-47 202.0
59 TraesCS6D01G174400 chr3A 91.176 102 8 1 1313 1414 42130170 42130270 4.030000e-28 137.0
60 TraesCS6D01G174400 chr4D 88.667 150 16 1 3035 3184 11858605 11858753 1.830000e-41 182.0
61 TraesCS6D01G174400 chr1D 95.556 90 3 1 1325 1414 64145527 64145439 8.650000e-30 143.0
62 TraesCS6D01G174400 chr1D 82.927 123 17 4 371 492 16355387 16355506 3.160000e-19 108.0
63 TraesCS6D01G174400 chr1D 97.143 35 1 0 3361 3395 48390741 48390775 8.970000e-05 60.2
64 TraesCS6D01G174400 chr2B 100.000 29 0 0 459 487 798202522 798202494 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G174400 chr6D 163829613 163837884 8271 False 7370.000000 9238 100.000 1 8272 2 chr6D.!!$F2 8271
1 TraesCS6D01G174400 chr6A 258132407 258143021 10614 False 4048.666667 4987 97.354 655 8272 3 chr6A.!!$F5 7617
2 TraesCS6D01G174400 chr6B 309746041 309756117 10076 True 3060.250000 4926 97.109 552 8270 4 chr6B.!!$R2 7718
3 TraesCS6D01G174400 chr7D 243334625 243335272 647 True 329.000000 329 77.074 3178 3797 1 chr7D.!!$R1 619
4 TraesCS6D01G174400 chr7A 258414570 258415160 590 True 311.000000 311 77.228 3225 3797 1 chr7A.!!$R2 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 200 0.032952 TGTTCTTCGGTAGCGCAGTT 59.967 50.000 11.47 0.00 0.00 3.16 F
524 525 0.036164 TGGGCTAAACGTGCTGATGT 59.964 50.000 0.00 0.00 0.00 3.06 F
528 529 0.095245 CTAAACGTGCTGATGTGCCG 59.905 55.000 0.00 0.00 34.52 5.69 F
551 552 1.003262 CGTTTCCTTGTTGCGCCATG 61.003 55.000 4.18 0.00 0.00 3.66 F
552 553 1.006337 TTTCCTTGTTGCGCCATGC 60.006 52.632 4.18 0.00 46.70 4.06 F
555 556 2.126228 CTTGTTGCGCCATGCCTG 60.126 61.111 4.18 0.00 45.60 4.85 F
1822 1825 2.549992 CCTGCAGTTACTAACCTGTGCA 60.550 50.000 13.81 11.70 37.63 4.57 F
2984 5925 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85 F
3818 6974 0.035152 AGATTGGAACCGATGCTGCA 60.035 50.000 4.13 4.13 0.00 4.41 F
4615 7776 4.320608 ACCACCAGTAAGTTGCATTTTG 57.679 40.909 0.00 0.00 0.00 2.44 F
5326 8501 0.258774 AAGGGTCTGTGCTTTGTGGT 59.741 50.000 0.00 0.00 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1226 1229 1.308998 CCGCTTCAACCAAGAACTGT 58.691 50.000 0.00 0.0 33.29 3.55 R
2518 2521 3.434167 GCACCCTACTCATCCAATCACAT 60.434 47.826 0.00 0.0 0.00 3.21 R
2571 2574 5.525378 CCTATTTCTCCCTCTTGATTGAACG 59.475 44.000 0.00 0.0 0.00 3.95 R
2619 2622 3.815401 GCTTACATCACACAGAACAGGTT 59.185 43.478 0.00 0.0 0.00 3.50 R
2647 2650 4.764823 TGACCACATCTTTATTGGTTGTCC 59.235 41.667 0.00 0.0 43.94 4.02 R
2824 2827 0.107643 TCGCCATGTCTGTGTTTCCA 59.892 50.000 0.00 0.0 0.00 3.53 R
3339 6474 0.245539 GCCATGTCATTGCTGCTTGT 59.754 50.000 0.00 0.0 0.00 3.16 R
4679 7840 1.065102 CAGGTGCATTGCATACTCAGC 59.935 52.381 15.49 0.0 41.91 4.26 R
5307 8482 0.258774 ACCACAAAGCACAGACCCTT 59.741 50.000 0.00 0.0 0.00 3.95 R
6575 9771 2.566746 AGGTCCATTCCAGACTTCCAT 58.433 47.619 0.00 0.0 34.56 3.41 R
7584 10780 1.675720 AACAGGCACCAAACAGCACC 61.676 55.000 0.00 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.065993 CGCCGTTCTCTTCTTGAAGA 57.934 50.000 11.90 11.90 0.00 2.87
20 21 1.721926 CGCCGTTCTCTTCTTGAAGAC 59.278 52.381 8.80 0.81 0.00 3.01
21 22 1.721926 GCCGTTCTCTTCTTGAAGACG 59.278 52.381 8.80 11.19 34.74 4.18
22 23 2.862921 GCCGTTCTCTTCTTGAAGACGT 60.863 50.000 16.29 0.00 33.80 4.34
23 24 2.981140 CCGTTCTCTTCTTGAAGACGTC 59.019 50.000 7.70 7.70 33.80 4.34
24 25 2.652642 CGTTCTCTTCTTGAAGACGTCG 59.347 50.000 10.46 9.40 32.18 5.12
25 26 2.333389 TCTCTTCTTGAAGACGTCGC 57.667 50.000 10.46 7.22 0.00 5.19
26 27 1.068472 TCTCTTCTTGAAGACGTCGCC 60.068 52.381 10.46 6.60 0.00 5.54
27 28 0.386858 TCTTCTTGAAGACGTCGCCG 60.387 55.000 10.46 0.00 40.83 6.46
38 39 3.692406 GTCGCCGTGGACCTCCTT 61.692 66.667 0.00 0.00 36.82 3.36
39 40 3.691342 TCGCCGTGGACCTCCTTG 61.691 66.667 0.00 0.00 36.82 3.61
42 43 4.760047 CCGTGGACCTCCTTGCCG 62.760 72.222 0.00 0.00 36.82 5.69
47 48 4.373116 GACCTCCTTGCCGCGTCA 62.373 66.667 4.92 0.00 0.00 4.35
48 49 4.379243 ACCTCCTTGCCGCGTCAG 62.379 66.667 4.92 0.00 0.00 3.51
49 50 4.069232 CCTCCTTGCCGCGTCAGA 62.069 66.667 4.92 0.00 0.00 3.27
50 51 2.507992 CTCCTTGCCGCGTCAGAG 60.508 66.667 4.92 0.00 0.00 3.35
51 52 3.288308 CTCCTTGCCGCGTCAGAGT 62.288 63.158 4.92 0.00 0.00 3.24
52 53 2.357517 CCTTGCCGCGTCAGAGTT 60.358 61.111 4.92 0.00 0.00 3.01
53 54 2.383527 CCTTGCCGCGTCAGAGTTC 61.384 63.158 4.92 0.00 0.00 3.01
54 55 2.357034 TTGCCGCGTCAGAGTTCC 60.357 61.111 4.92 0.00 0.00 3.62
55 56 4.717629 TGCCGCGTCAGAGTTCCG 62.718 66.667 4.92 0.00 0.00 4.30
57 58 4.796231 CCGCGTCAGAGTTCCGGG 62.796 72.222 4.92 0.00 35.54 5.73
58 59 4.052229 CGCGTCAGAGTTCCGGGT 62.052 66.667 0.00 0.00 0.00 5.28
59 60 2.432628 GCGTCAGAGTTCCGGGTG 60.433 66.667 0.00 0.00 0.00 4.61
60 61 2.927580 GCGTCAGAGTTCCGGGTGA 61.928 63.158 0.00 0.00 0.00 4.02
61 62 1.663739 CGTCAGAGTTCCGGGTGAA 59.336 57.895 0.00 0.00 0.00 3.18
62 63 0.388649 CGTCAGAGTTCCGGGTGAAG 60.389 60.000 0.00 0.00 32.37 3.02
63 64 0.966920 GTCAGAGTTCCGGGTGAAGA 59.033 55.000 0.00 0.00 32.37 2.87
64 65 0.966920 TCAGAGTTCCGGGTGAAGAC 59.033 55.000 0.00 0.00 32.37 3.01
65 66 0.037232 CAGAGTTCCGGGTGAAGACC 60.037 60.000 0.00 0.00 42.27 3.85
73 74 2.359975 GGTGAAGACCCTTGCCCG 60.360 66.667 0.00 0.00 36.03 6.13
74 75 2.359975 GTGAAGACCCTTGCCCGG 60.360 66.667 0.00 0.00 0.00 5.73
75 76 2.852075 TGAAGACCCTTGCCCGGT 60.852 61.111 0.00 0.00 35.88 5.28
76 77 2.359975 GAAGACCCTTGCCCGGTG 60.360 66.667 0.00 0.00 32.27 4.94
77 78 3.920093 GAAGACCCTTGCCCGGTGG 62.920 68.421 0.00 0.00 32.27 4.61
112 113 3.828885 GCTTTGCGCCGTTTTCTC 58.171 55.556 4.18 0.00 0.00 2.87
113 114 1.282875 GCTTTGCGCCGTTTTCTCT 59.717 52.632 4.18 0.00 0.00 3.10
114 115 0.726118 GCTTTGCGCCGTTTTCTCTC 60.726 55.000 4.18 0.00 0.00 3.20
115 116 0.868406 CTTTGCGCCGTTTTCTCTCT 59.132 50.000 4.18 0.00 0.00 3.10
116 117 1.264288 CTTTGCGCCGTTTTCTCTCTT 59.736 47.619 4.18 0.00 0.00 2.85
117 118 0.586319 TTGCGCCGTTTTCTCTCTTG 59.414 50.000 4.18 0.00 0.00 3.02
118 119 1.227999 TGCGCCGTTTTCTCTCTTGG 61.228 55.000 4.18 0.00 0.00 3.61
119 120 1.912371 GCGCCGTTTTCTCTCTTGGG 61.912 60.000 0.00 0.00 0.00 4.12
120 121 1.298859 CGCCGTTTTCTCTCTTGGGG 61.299 60.000 0.00 0.00 0.00 4.96
121 122 0.960861 GCCGTTTTCTCTCTTGGGGG 60.961 60.000 0.00 0.00 0.00 5.40
122 123 0.960861 CCGTTTTCTCTCTTGGGGGC 60.961 60.000 0.00 0.00 0.00 5.80
123 124 1.298859 CGTTTTCTCTCTTGGGGGCG 61.299 60.000 0.00 0.00 0.00 6.13
124 125 0.250770 GTTTTCTCTCTTGGGGGCGT 60.251 55.000 0.00 0.00 0.00 5.68
125 126 0.476771 TTTTCTCTCTTGGGGGCGTT 59.523 50.000 0.00 0.00 0.00 4.84
126 127 0.250727 TTTCTCTCTTGGGGGCGTTG 60.251 55.000 0.00 0.00 0.00 4.10
127 128 1.415672 TTCTCTCTTGGGGGCGTTGT 61.416 55.000 0.00 0.00 0.00 3.32
128 129 1.376037 CTCTCTTGGGGGCGTTGTC 60.376 63.158 0.00 0.00 0.00 3.18
129 130 1.831652 CTCTCTTGGGGGCGTTGTCT 61.832 60.000 0.00 0.00 0.00 3.41
130 131 0.543410 TCTCTTGGGGGCGTTGTCTA 60.543 55.000 0.00 0.00 0.00 2.59
131 132 0.108138 CTCTTGGGGGCGTTGTCTAG 60.108 60.000 0.00 0.00 0.00 2.43
132 133 0.543410 TCTTGGGGGCGTTGTCTAGA 60.543 55.000 0.00 0.00 0.00 2.43
133 134 0.323629 CTTGGGGGCGTTGTCTAGAA 59.676 55.000 0.00 0.00 0.00 2.10
134 135 0.323629 TTGGGGGCGTTGTCTAGAAG 59.676 55.000 0.00 0.00 0.00 2.85
135 136 1.449778 GGGGGCGTTGTCTAGAAGC 60.450 63.158 0.00 0.00 0.00 3.86
136 137 1.597461 GGGGCGTTGTCTAGAAGCT 59.403 57.895 0.00 0.00 0.00 3.74
137 138 0.036294 GGGGCGTTGTCTAGAAGCTT 60.036 55.000 0.00 0.00 0.00 3.74
138 139 1.206371 GGGGCGTTGTCTAGAAGCTTA 59.794 52.381 0.00 0.00 0.00 3.09
139 140 2.541556 GGGCGTTGTCTAGAAGCTTAG 58.458 52.381 0.00 0.00 0.00 2.18
140 141 2.541556 GGCGTTGTCTAGAAGCTTAGG 58.458 52.381 0.00 0.00 0.00 2.69
141 142 2.094130 GGCGTTGTCTAGAAGCTTAGGT 60.094 50.000 0.00 0.00 0.00 3.08
142 143 2.924290 GCGTTGTCTAGAAGCTTAGGTG 59.076 50.000 0.00 0.00 0.00 4.00
143 144 3.614390 GCGTTGTCTAGAAGCTTAGGTGT 60.614 47.826 0.00 0.00 0.00 4.16
144 145 4.167268 CGTTGTCTAGAAGCTTAGGTGTC 58.833 47.826 0.00 0.00 0.00 3.67
145 146 4.496360 GTTGTCTAGAAGCTTAGGTGTCC 58.504 47.826 0.00 0.00 0.00 4.02
146 147 4.048970 TGTCTAGAAGCTTAGGTGTCCT 57.951 45.455 0.00 0.00 37.71 3.85
147 148 5.188988 TGTCTAGAAGCTTAGGTGTCCTA 57.811 43.478 0.00 0.00 34.61 2.94
148 149 5.194432 TGTCTAGAAGCTTAGGTGTCCTAG 58.806 45.833 0.00 4.35 37.42 3.02
149 150 4.581409 GTCTAGAAGCTTAGGTGTCCTAGG 59.419 50.000 0.82 0.82 37.42 3.02
150 151 2.753247 AGAAGCTTAGGTGTCCTAGGG 58.247 52.381 9.46 0.00 37.42 3.53
151 152 2.044630 AGAAGCTTAGGTGTCCTAGGGT 59.955 50.000 9.46 4.27 43.93 4.34
152 153 1.867363 AGCTTAGGTGTCCTAGGGTG 58.133 55.000 9.46 0.00 41.27 4.61
153 154 1.078989 AGCTTAGGTGTCCTAGGGTGT 59.921 52.381 9.46 0.00 41.27 4.16
154 155 1.907255 GCTTAGGTGTCCTAGGGTGTT 59.093 52.381 9.46 0.00 37.42 3.32
155 156 2.354805 GCTTAGGTGTCCTAGGGTGTTG 60.355 54.545 9.46 0.00 37.42 3.33
156 157 1.272807 TAGGTGTCCTAGGGTGTTGC 58.727 55.000 9.46 0.00 34.61 4.17
157 158 1.375523 GGTGTCCTAGGGTGTTGCG 60.376 63.158 9.46 0.00 0.00 4.85
158 159 1.370064 GTGTCCTAGGGTGTTGCGT 59.630 57.895 9.46 0.00 0.00 5.24
159 160 0.949105 GTGTCCTAGGGTGTTGCGTG 60.949 60.000 9.46 0.00 0.00 5.34
160 161 1.116536 TGTCCTAGGGTGTTGCGTGA 61.117 55.000 9.46 0.00 0.00 4.35
161 162 0.249398 GTCCTAGGGTGTTGCGTGAT 59.751 55.000 9.46 0.00 0.00 3.06
162 163 0.981183 TCCTAGGGTGTTGCGTGATT 59.019 50.000 9.46 0.00 0.00 2.57
163 164 1.086696 CCTAGGGTGTTGCGTGATTG 58.913 55.000 0.00 0.00 0.00 2.67
164 165 1.610624 CCTAGGGTGTTGCGTGATTGT 60.611 52.381 0.00 0.00 0.00 2.71
165 166 1.464608 CTAGGGTGTTGCGTGATTGTG 59.535 52.381 0.00 0.00 0.00 3.33
166 167 1.371635 GGGTGTTGCGTGATTGTGC 60.372 57.895 0.00 0.00 0.00 4.57
167 168 1.654220 GGTGTTGCGTGATTGTGCT 59.346 52.632 0.00 0.00 0.00 4.40
168 169 0.385974 GGTGTTGCGTGATTGTGCTC 60.386 55.000 0.00 0.00 0.00 4.26
169 170 0.385974 GTGTTGCGTGATTGTGCTCC 60.386 55.000 0.00 0.00 0.00 4.70
170 171 0.817229 TGTTGCGTGATTGTGCTCCA 60.817 50.000 0.00 0.00 0.00 3.86
171 172 0.523072 GTTGCGTGATTGTGCTCCAT 59.477 50.000 0.00 0.00 0.00 3.41
172 173 1.068333 GTTGCGTGATTGTGCTCCATT 60.068 47.619 0.00 0.00 0.00 3.16
173 174 0.804364 TGCGTGATTGTGCTCCATTC 59.196 50.000 0.00 0.00 0.00 2.67
174 175 1.089920 GCGTGATTGTGCTCCATTCT 58.910 50.000 0.00 0.00 0.00 2.40
175 176 1.063174 GCGTGATTGTGCTCCATTCTC 59.937 52.381 0.00 0.00 0.00 2.87
176 177 1.667724 CGTGATTGTGCTCCATTCTCC 59.332 52.381 0.00 0.00 0.00 3.71
177 178 2.019984 GTGATTGTGCTCCATTCTCCC 58.980 52.381 0.00 0.00 0.00 4.30
178 179 1.918262 TGATTGTGCTCCATTCTCCCT 59.082 47.619 0.00 0.00 0.00 4.20
179 180 2.295885 GATTGTGCTCCATTCTCCCTG 58.704 52.381 0.00 0.00 0.00 4.45
180 181 1.067295 TTGTGCTCCATTCTCCCTGT 58.933 50.000 0.00 0.00 0.00 4.00
181 182 0.325933 TGTGCTCCATTCTCCCTGTG 59.674 55.000 0.00 0.00 0.00 3.66
182 183 0.326264 GTGCTCCATTCTCCCTGTGT 59.674 55.000 0.00 0.00 0.00 3.72
183 184 1.067295 TGCTCCATTCTCCCTGTGTT 58.933 50.000 0.00 0.00 0.00 3.32
184 185 1.003580 TGCTCCATTCTCCCTGTGTTC 59.996 52.381 0.00 0.00 0.00 3.18
185 186 1.280421 GCTCCATTCTCCCTGTGTTCT 59.720 52.381 0.00 0.00 0.00 3.01
186 187 2.290577 GCTCCATTCTCCCTGTGTTCTT 60.291 50.000 0.00 0.00 0.00 2.52
187 188 3.604582 CTCCATTCTCCCTGTGTTCTTC 58.395 50.000 0.00 0.00 0.00 2.87
188 189 2.028112 TCCATTCTCCCTGTGTTCTTCG 60.028 50.000 0.00 0.00 0.00 3.79
189 190 2.350522 CATTCTCCCTGTGTTCTTCGG 58.649 52.381 0.00 0.00 0.00 4.30
190 191 1.420430 TTCTCCCTGTGTTCTTCGGT 58.580 50.000 0.00 0.00 0.00 4.69
191 192 2.297698 TCTCCCTGTGTTCTTCGGTA 57.702 50.000 0.00 0.00 0.00 4.02
192 193 2.168496 TCTCCCTGTGTTCTTCGGTAG 58.832 52.381 0.00 0.00 0.00 3.18
193 194 0.606604 TCCCTGTGTTCTTCGGTAGC 59.393 55.000 0.00 0.00 0.00 3.58
194 195 0.736325 CCCTGTGTTCTTCGGTAGCG 60.736 60.000 8.29 8.29 0.00 4.26
195 196 1.352156 CCTGTGTTCTTCGGTAGCGC 61.352 60.000 9.99 0.00 0.00 5.92
196 197 0.666274 CTGTGTTCTTCGGTAGCGCA 60.666 55.000 11.47 0.00 0.00 6.09
197 198 0.666274 TGTGTTCTTCGGTAGCGCAG 60.666 55.000 11.47 8.76 0.00 5.18
198 199 0.666577 GTGTTCTTCGGTAGCGCAGT 60.667 55.000 11.47 0.00 0.00 4.40
199 200 0.032952 TGTTCTTCGGTAGCGCAGTT 59.967 50.000 11.47 0.00 0.00 3.16
200 201 0.438830 GTTCTTCGGTAGCGCAGTTG 59.561 55.000 11.47 0.00 0.00 3.16
201 202 1.289109 TTCTTCGGTAGCGCAGTTGC 61.289 55.000 11.47 0.00 37.78 4.17
203 204 1.291877 CTTCGGTAGCGCAGTTGCTT 61.292 55.000 11.47 0.00 44.46 3.91
204 205 1.565156 TTCGGTAGCGCAGTTGCTTG 61.565 55.000 11.47 0.00 44.46 4.01
205 206 2.317609 CGGTAGCGCAGTTGCTTGT 61.318 57.895 11.47 0.00 44.46 3.16
206 207 1.497722 GGTAGCGCAGTTGCTTGTC 59.502 57.895 11.47 0.00 44.46 3.18
207 208 0.951040 GGTAGCGCAGTTGCTTGTCT 60.951 55.000 11.47 0.00 44.46 3.41
208 209 0.164647 GTAGCGCAGTTGCTTGTCTG 59.835 55.000 11.47 0.00 44.46 3.51
209 210 1.568612 TAGCGCAGTTGCTTGTCTGC 61.569 55.000 11.47 7.03 44.46 4.26
213 214 3.742290 CAGTTGCTTGTCTGCTTCG 57.258 52.632 0.00 0.00 0.00 3.79
214 215 0.385223 CAGTTGCTTGTCTGCTTCGC 60.385 55.000 0.00 0.00 0.00 4.70
215 216 1.439365 GTTGCTTGTCTGCTTCGCG 60.439 57.895 0.00 0.00 0.00 5.87
216 217 1.594021 TTGCTTGTCTGCTTCGCGA 60.594 52.632 3.71 3.71 0.00 5.87
217 218 0.950555 TTGCTTGTCTGCTTCGCGAT 60.951 50.000 10.88 0.00 0.00 4.58
218 219 1.346538 GCTTGTCTGCTTCGCGATC 59.653 57.895 10.88 5.70 0.00 3.69
219 220 1.080995 GCTTGTCTGCTTCGCGATCT 61.081 55.000 10.88 0.00 0.00 2.75
220 221 0.644331 CTTGTCTGCTTCGCGATCTG 59.356 55.000 10.88 9.45 0.00 2.90
221 222 0.737367 TTGTCTGCTTCGCGATCTGG 60.737 55.000 10.88 1.84 0.00 3.86
222 223 1.880340 GTCTGCTTCGCGATCTGGG 60.880 63.158 10.88 0.00 0.00 4.45
223 224 2.185350 CTGCTTCGCGATCTGGGT 59.815 61.111 10.88 0.00 0.00 4.51
224 225 1.035385 TCTGCTTCGCGATCTGGGTA 61.035 55.000 10.88 0.00 0.00 3.69
225 226 0.596083 CTGCTTCGCGATCTGGGTAG 60.596 60.000 10.88 2.98 0.00 3.18
226 227 1.951631 GCTTCGCGATCTGGGTAGC 60.952 63.158 10.88 10.68 44.33 3.58
227 228 1.300233 CTTCGCGATCTGGGTAGCC 60.300 63.158 10.88 3.29 0.00 3.93
228 229 1.739338 CTTCGCGATCTGGGTAGCCT 61.739 60.000 10.88 0.00 0.00 4.58
229 230 0.466739 TTCGCGATCTGGGTAGCCTA 60.467 55.000 10.88 0.40 0.00 3.93
230 231 0.889638 TCGCGATCTGGGTAGCCTAG 60.890 60.000 13.11 8.17 33.15 3.02
231 232 1.867919 CGCGATCTGGGTAGCCTAGG 61.868 65.000 13.11 3.67 32.70 3.02
232 233 0.539901 GCGATCTGGGTAGCCTAGGA 60.540 60.000 14.75 8.26 32.70 2.94
233 234 1.893210 GCGATCTGGGTAGCCTAGGAT 60.893 57.143 14.75 9.51 32.70 3.24
234 235 2.096248 CGATCTGGGTAGCCTAGGATC 58.904 57.143 14.75 21.13 32.70 3.36
235 236 2.291282 CGATCTGGGTAGCCTAGGATCT 60.291 54.545 24.68 3.19 32.70 2.75
236 237 2.685106 TCTGGGTAGCCTAGGATCTG 57.315 55.000 14.75 0.00 32.70 2.90
237 238 0.972883 CTGGGTAGCCTAGGATCTGC 59.027 60.000 14.75 4.33 0.00 4.26
238 239 0.563173 TGGGTAGCCTAGGATCTGCT 59.437 55.000 14.75 4.11 39.10 4.24
239 240 1.062121 TGGGTAGCCTAGGATCTGCTT 60.062 52.381 14.75 0.00 36.57 3.91
240 241 2.050918 GGGTAGCCTAGGATCTGCTTT 58.949 52.381 14.75 0.00 36.57 3.51
241 242 2.224402 GGGTAGCCTAGGATCTGCTTTG 60.224 54.545 14.75 0.00 36.57 2.77
242 243 2.436173 GGTAGCCTAGGATCTGCTTTGT 59.564 50.000 14.75 0.00 36.57 2.83
243 244 3.641906 GGTAGCCTAGGATCTGCTTTGTA 59.358 47.826 14.75 0.00 36.57 2.41
244 245 4.101119 GGTAGCCTAGGATCTGCTTTGTAA 59.899 45.833 14.75 0.00 36.57 2.41
245 246 4.414337 AGCCTAGGATCTGCTTTGTAAG 57.586 45.455 14.75 0.00 29.17 2.34
246 247 4.033709 AGCCTAGGATCTGCTTTGTAAGA 58.966 43.478 14.75 0.00 29.17 2.10
247 248 4.100808 AGCCTAGGATCTGCTTTGTAAGAG 59.899 45.833 14.75 0.00 29.17 2.85
248 249 4.742138 GCCTAGGATCTGCTTTGTAAGAGG 60.742 50.000 14.75 0.00 0.00 3.69
249 250 4.651503 CCTAGGATCTGCTTTGTAAGAGGA 59.348 45.833 1.05 0.00 0.00 3.71
250 251 5.306678 CCTAGGATCTGCTTTGTAAGAGGAT 59.693 44.000 1.05 0.00 0.00 3.24
251 252 5.289083 AGGATCTGCTTTGTAAGAGGATC 57.711 43.478 0.00 0.00 37.34 3.36
252 253 4.718774 AGGATCTGCTTTGTAAGAGGATCA 59.281 41.667 16.24 0.00 38.54 2.92
253 254 4.813697 GGATCTGCTTTGTAAGAGGATCAC 59.186 45.833 16.24 0.00 38.54 3.06
254 255 4.207891 TCTGCTTTGTAAGAGGATCACC 57.792 45.455 0.00 0.00 37.82 4.02
268 269 3.854666 GGATCACCTCCATCATGTATCG 58.145 50.000 0.00 0.00 44.26 2.92
269 270 3.259374 GGATCACCTCCATCATGTATCGT 59.741 47.826 0.00 0.00 44.26 3.73
270 271 4.262635 GGATCACCTCCATCATGTATCGTT 60.263 45.833 0.00 0.00 44.26 3.85
271 272 4.322080 TCACCTCCATCATGTATCGTTC 57.678 45.455 0.00 0.00 0.00 3.95
272 273 3.052745 CACCTCCATCATGTATCGTTCG 58.947 50.000 0.00 0.00 0.00 3.95
273 274 2.035961 ACCTCCATCATGTATCGTTCGG 59.964 50.000 0.00 0.00 0.00 4.30
274 275 2.061773 CTCCATCATGTATCGTTCGGC 58.938 52.381 0.00 0.00 0.00 5.54
275 276 1.148310 CCATCATGTATCGTTCGGCC 58.852 55.000 0.00 0.00 0.00 6.13
276 277 0.784178 CATCATGTATCGTTCGGCCG 59.216 55.000 22.12 22.12 0.00 6.13
277 278 0.387929 ATCATGTATCGTTCGGCCGT 59.612 50.000 27.15 7.91 0.00 5.68
278 279 0.526739 TCATGTATCGTTCGGCCGTG 60.527 55.000 27.15 16.45 0.00 4.94
279 280 0.804544 CATGTATCGTTCGGCCGTGT 60.805 55.000 27.15 10.18 0.00 4.49
280 281 0.740149 ATGTATCGTTCGGCCGTGTA 59.260 50.000 27.15 9.28 0.00 2.90
281 282 0.740149 TGTATCGTTCGGCCGTGTAT 59.260 50.000 27.15 16.41 0.00 2.29
282 283 1.268692 TGTATCGTTCGGCCGTGTATC 60.269 52.381 27.15 11.26 0.00 2.24
283 284 1.002033 GTATCGTTCGGCCGTGTATCT 60.002 52.381 27.15 9.45 0.00 1.98
284 285 0.458669 ATCGTTCGGCCGTGTATCTT 59.541 50.000 27.15 2.35 0.00 2.40
285 286 0.457166 TCGTTCGGCCGTGTATCTTG 60.457 55.000 27.15 7.72 0.00 3.02
286 287 0.734942 CGTTCGGCCGTGTATCTTGT 60.735 55.000 27.15 0.00 0.00 3.16
287 288 1.435577 GTTCGGCCGTGTATCTTGTT 58.564 50.000 27.15 0.00 0.00 2.83
288 289 1.392510 GTTCGGCCGTGTATCTTGTTC 59.607 52.381 27.15 0.00 0.00 3.18
289 290 0.457166 TCGGCCGTGTATCTTGTTCG 60.457 55.000 27.15 0.00 0.00 3.95
290 291 1.418342 CGGCCGTGTATCTTGTTCGG 61.418 60.000 19.50 0.00 43.37 4.30
291 292 0.390735 GGCCGTGTATCTTGTTCGGT 60.391 55.000 0.00 0.00 42.62 4.69
292 293 1.435577 GCCGTGTATCTTGTTCGGTT 58.564 50.000 0.00 0.00 42.62 4.44
293 294 1.802365 GCCGTGTATCTTGTTCGGTTT 59.198 47.619 0.00 0.00 42.62 3.27
294 295 2.412325 GCCGTGTATCTTGTTCGGTTTG 60.412 50.000 0.00 0.00 42.62 2.93
295 296 2.803956 CCGTGTATCTTGTTCGGTTTGT 59.196 45.455 0.00 0.00 36.99 2.83
296 297 3.363575 CCGTGTATCTTGTTCGGTTTGTG 60.364 47.826 0.00 0.00 36.99 3.33
297 298 3.551551 GTGTATCTTGTTCGGTTTGTGC 58.448 45.455 0.00 0.00 0.00 4.57
298 299 2.550606 TGTATCTTGTTCGGTTTGTGCC 59.449 45.455 0.00 0.00 0.00 5.01
299 300 1.981256 ATCTTGTTCGGTTTGTGCCT 58.019 45.000 0.00 0.00 0.00 4.75
300 301 1.757682 TCTTGTTCGGTTTGTGCCTT 58.242 45.000 0.00 0.00 0.00 4.35
301 302 2.096248 TCTTGTTCGGTTTGTGCCTTT 58.904 42.857 0.00 0.00 0.00 3.11
302 303 3.280295 TCTTGTTCGGTTTGTGCCTTTA 58.720 40.909 0.00 0.00 0.00 1.85
303 304 3.886505 TCTTGTTCGGTTTGTGCCTTTAT 59.113 39.130 0.00 0.00 0.00 1.40
304 305 4.339814 TCTTGTTCGGTTTGTGCCTTTATT 59.660 37.500 0.00 0.00 0.00 1.40
305 306 4.657436 TGTTCGGTTTGTGCCTTTATTT 57.343 36.364 0.00 0.00 0.00 1.40
306 307 5.769484 TGTTCGGTTTGTGCCTTTATTTA 57.231 34.783 0.00 0.00 0.00 1.40
307 308 6.334102 TGTTCGGTTTGTGCCTTTATTTAT 57.666 33.333 0.00 0.00 0.00 1.40
308 309 7.450124 TGTTCGGTTTGTGCCTTTATTTATA 57.550 32.000 0.00 0.00 0.00 0.98
309 310 7.883217 TGTTCGGTTTGTGCCTTTATTTATAA 58.117 30.769 0.00 0.00 0.00 0.98
310 311 8.358148 TGTTCGGTTTGTGCCTTTATTTATAAA 58.642 29.630 0.00 0.00 0.00 1.40
311 312 8.856247 GTTCGGTTTGTGCCTTTATTTATAAAG 58.144 33.333 13.03 13.03 45.45 1.85
337 338 3.797348 GAAAGCCTGTTTCGAGAAGTC 57.203 47.619 0.00 0.00 0.00 3.01
339 340 0.674534 AGCCTGTTTCGAGAAGTCGT 59.325 50.000 0.00 0.00 46.85 4.34
340 341 0.784778 GCCTGTTTCGAGAAGTCGTG 59.215 55.000 0.00 0.00 46.85 4.35
341 342 1.602165 GCCTGTTTCGAGAAGTCGTGA 60.602 52.381 0.00 0.00 46.85 4.35
342 343 2.320367 CCTGTTTCGAGAAGTCGTGAG 58.680 52.381 0.00 0.00 46.85 3.51
343 344 2.287668 CCTGTTTCGAGAAGTCGTGAGT 60.288 50.000 0.00 0.00 46.85 3.41
344 345 3.372954 CTGTTTCGAGAAGTCGTGAGTT 58.627 45.455 0.00 0.00 46.85 3.01
345 346 3.369385 TGTTTCGAGAAGTCGTGAGTTC 58.631 45.455 9.00 9.00 46.85 3.01
346 347 2.311450 TTCGAGAAGTCGTGAGTTCG 57.689 50.000 10.83 2.84 46.85 3.95
347 348 1.505425 TCGAGAAGTCGTGAGTTCGA 58.495 50.000 10.83 4.94 46.85 3.71
348 349 1.869132 TCGAGAAGTCGTGAGTTCGAA 59.131 47.619 10.83 0.00 46.85 3.71
349 350 2.483106 TCGAGAAGTCGTGAGTTCGAAT 59.517 45.455 0.00 0.00 46.85 3.34
350 351 2.841329 CGAGAAGTCGTGAGTTCGAATC 59.159 50.000 0.00 0.84 43.63 2.52
351 352 3.172824 GAGAAGTCGTGAGTTCGAATCC 58.827 50.000 0.00 0.00 43.63 3.01
352 353 2.094649 AGAAGTCGTGAGTTCGAATCCC 60.095 50.000 0.00 0.00 43.63 3.85
353 354 1.254026 AGTCGTGAGTTCGAATCCCA 58.746 50.000 0.00 0.00 41.47 4.37
354 355 1.202582 AGTCGTGAGTTCGAATCCCAG 59.797 52.381 0.00 0.00 41.47 4.45
355 356 0.108804 TCGTGAGTTCGAATCCCAGC 60.109 55.000 0.00 0.00 36.89 4.85
356 357 1.084370 CGTGAGTTCGAATCCCAGCC 61.084 60.000 0.00 0.00 0.00 4.85
357 358 0.036388 GTGAGTTCGAATCCCAGCCA 60.036 55.000 0.00 0.00 0.00 4.75
358 359 0.036388 TGAGTTCGAATCCCAGCCAC 60.036 55.000 0.00 0.00 0.00 5.01
359 360 0.744771 GAGTTCGAATCCCAGCCACC 60.745 60.000 0.00 0.00 0.00 4.61
360 361 1.201429 AGTTCGAATCCCAGCCACCT 61.201 55.000 0.00 0.00 0.00 4.00
361 362 0.322546 GTTCGAATCCCAGCCACCTT 60.323 55.000 0.00 0.00 0.00 3.50
362 363 0.322456 TTCGAATCCCAGCCACCTTG 60.322 55.000 0.00 0.00 0.00 3.61
363 364 1.002134 CGAATCCCAGCCACCTTGT 60.002 57.895 0.00 0.00 0.00 3.16
364 365 0.251916 CGAATCCCAGCCACCTTGTA 59.748 55.000 0.00 0.00 0.00 2.41
365 366 1.134098 CGAATCCCAGCCACCTTGTAT 60.134 52.381 0.00 0.00 0.00 2.29
366 367 2.683742 CGAATCCCAGCCACCTTGTATT 60.684 50.000 0.00 0.00 0.00 1.89
367 368 3.433031 CGAATCCCAGCCACCTTGTATTA 60.433 47.826 0.00 0.00 0.00 0.98
368 369 4.532834 GAATCCCAGCCACCTTGTATTAA 58.467 43.478 0.00 0.00 0.00 1.40
369 370 3.359695 TCCCAGCCACCTTGTATTAAC 57.640 47.619 0.00 0.00 0.00 2.01
370 371 2.916934 TCCCAGCCACCTTGTATTAACT 59.083 45.455 0.00 0.00 0.00 2.24
371 372 3.332485 TCCCAGCCACCTTGTATTAACTT 59.668 43.478 0.00 0.00 0.00 2.66
372 373 4.086457 CCCAGCCACCTTGTATTAACTTT 58.914 43.478 0.00 0.00 0.00 2.66
373 374 4.526650 CCCAGCCACCTTGTATTAACTTTT 59.473 41.667 0.00 0.00 0.00 2.27
374 375 5.011635 CCCAGCCACCTTGTATTAACTTTTT 59.988 40.000 0.00 0.00 0.00 1.94
375 376 5.925969 CCAGCCACCTTGTATTAACTTTTTG 59.074 40.000 0.00 0.00 0.00 2.44
376 377 6.462347 CCAGCCACCTTGTATTAACTTTTTGT 60.462 38.462 0.00 0.00 0.00 2.83
377 378 6.420604 CAGCCACCTTGTATTAACTTTTTGTG 59.579 38.462 0.00 0.00 0.00 3.33
378 379 6.322712 AGCCACCTTGTATTAACTTTTTGTGA 59.677 34.615 0.00 0.00 0.00 3.58
379 380 7.015195 AGCCACCTTGTATTAACTTTTTGTGAT 59.985 33.333 0.00 0.00 0.00 3.06
380 381 7.655732 GCCACCTTGTATTAACTTTTTGTGATT 59.344 33.333 0.00 0.00 0.00 2.57
381 382 9.541143 CCACCTTGTATTAACTTTTTGTGATTT 57.459 29.630 0.00 0.00 0.00 2.17
391 392 6.732181 ACTTTTTGTGATTTTTCACGATCG 57.268 33.333 14.88 14.88 43.12 3.69
392 393 5.173131 ACTTTTTGTGATTTTTCACGATCGC 59.827 36.000 16.60 0.00 43.12 4.58
393 394 3.887339 TTGTGATTTTTCACGATCGCA 57.113 38.095 16.60 0.00 43.12 5.10
394 395 4.418013 TTGTGATTTTTCACGATCGCAT 57.582 36.364 16.60 0.00 41.02 4.73
395 396 4.418013 TGTGATTTTTCACGATCGCATT 57.582 36.364 16.60 0.00 43.12 3.56
396 397 4.402583 TGTGATTTTTCACGATCGCATTC 58.597 39.130 16.60 3.64 43.12 2.67
397 398 4.083590 TGTGATTTTTCACGATCGCATTCA 60.084 37.500 16.60 6.23 43.12 2.57
398 399 4.851014 GTGATTTTTCACGATCGCATTCAA 59.149 37.500 16.60 3.48 33.96 2.69
399 400 5.341993 GTGATTTTTCACGATCGCATTCAAA 59.658 36.000 16.60 8.63 33.96 2.69
400 401 5.568677 TGATTTTTCACGATCGCATTCAAAG 59.431 36.000 16.60 0.00 0.00 2.77
401 402 2.525750 TTCACGATCGCATTCAAAGC 57.474 45.000 16.60 0.00 0.00 3.51
444 445 3.732938 GGAGCACCCCTGTGAGAT 58.267 61.111 0.00 0.00 45.76 2.75
445 446 1.222936 GGAGCACCCCTGTGAGATG 59.777 63.158 0.00 0.00 45.76 2.90
446 447 1.222936 GAGCACCCCTGTGAGATGG 59.777 63.158 0.00 0.00 45.76 3.51
447 448 1.229625 AGCACCCCTGTGAGATGGA 60.230 57.895 0.00 0.00 45.76 3.41
448 449 1.222936 GCACCCCTGTGAGATGGAG 59.777 63.158 0.00 0.00 45.76 3.86
449 450 1.222936 CACCCCTGTGAGATGGAGC 59.777 63.158 0.00 0.00 45.76 4.70
450 451 1.229625 ACCCCTGTGAGATGGAGCA 60.230 57.895 0.00 0.00 0.00 4.26
451 452 1.222936 CCCCTGTGAGATGGAGCAC 59.777 63.158 0.00 0.00 35.63 4.40
452 453 1.153489 CCCTGTGAGATGGAGCACG 60.153 63.158 0.00 0.00 37.83 5.34
453 454 1.593787 CCTGTGAGATGGAGCACGT 59.406 57.895 0.00 0.00 37.83 4.49
454 455 0.817654 CCTGTGAGATGGAGCACGTA 59.182 55.000 0.00 0.00 37.83 3.57
455 456 1.410517 CCTGTGAGATGGAGCACGTAT 59.589 52.381 0.00 0.00 37.83 3.06
456 457 2.544694 CCTGTGAGATGGAGCACGTATC 60.545 54.545 0.00 0.00 37.83 2.24
457 458 2.360483 CTGTGAGATGGAGCACGTATCT 59.640 50.000 0.00 0.00 37.83 1.98
458 459 2.099756 TGTGAGATGGAGCACGTATCTG 59.900 50.000 2.55 0.00 37.83 2.90
459 460 1.067669 TGAGATGGAGCACGTATCTGC 59.932 52.381 2.55 2.41 37.44 4.26
460 461 0.390860 AGATGGAGCACGTATCTGCC 59.609 55.000 6.15 3.48 37.96 4.85
461 462 0.941463 GATGGAGCACGTATCTGCCG 60.941 60.000 6.15 0.00 37.96 5.69
462 463 2.962253 GGAGCACGTATCTGCCGC 60.962 66.667 0.00 0.00 37.96 6.53
463 464 2.202743 GAGCACGTATCTGCCGCA 60.203 61.111 0.00 0.00 37.96 5.69
464 465 2.202797 AGCACGTATCTGCCGCAG 60.203 61.111 14.62 14.62 37.96 5.18
465 466 2.202743 GCACGTATCTGCCGCAGA 60.203 61.111 24.90 24.90 44.99 4.26
466 467 1.809619 GCACGTATCTGCCGCAGAA 60.810 57.895 26.30 13.13 44.04 3.02
467 468 1.154205 GCACGTATCTGCCGCAGAAT 61.154 55.000 26.30 16.52 44.04 2.40
468 469 0.578683 CACGTATCTGCCGCAGAATG 59.421 55.000 26.30 20.40 44.04 2.67
480 481 3.384816 CAGAATGCGGCACATAGGA 57.615 52.632 4.03 0.00 38.34 2.94
481 482 0.940126 CAGAATGCGGCACATAGGAC 59.060 55.000 4.03 0.00 38.34 3.85
482 483 0.179045 AGAATGCGGCACATAGGACC 60.179 55.000 4.03 0.00 38.34 4.46
483 484 0.179045 GAATGCGGCACATAGGACCT 60.179 55.000 4.03 0.00 38.34 3.85
484 485 0.179045 AATGCGGCACATAGGACCTC 60.179 55.000 4.03 0.00 38.34 3.85
485 486 1.050988 ATGCGGCACATAGGACCTCT 61.051 55.000 4.03 0.00 37.17 3.69
486 487 1.068250 GCGGCACATAGGACCTCTC 59.932 63.158 0.00 0.00 0.00 3.20
487 488 1.742768 CGGCACATAGGACCTCTCC 59.257 63.158 0.00 0.00 36.71 3.71
488 489 1.043116 CGGCACATAGGACCTCTCCA 61.043 60.000 0.00 0.00 39.39 3.86
489 490 1.204146 GGCACATAGGACCTCTCCAA 58.796 55.000 0.00 0.00 39.39 3.53
490 491 1.559682 GGCACATAGGACCTCTCCAAA 59.440 52.381 0.00 0.00 39.39 3.28
491 492 2.026262 GGCACATAGGACCTCTCCAAAA 60.026 50.000 0.00 0.00 39.39 2.44
492 493 3.372025 GGCACATAGGACCTCTCCAAAAT 60.372 47.826 0.00 0.00 39.39 1.82
493 494 4.273318 GCACATAGGACCTCTCCAAAATT 58.727 43.478 0.00 0.00 39.39 1.82
494 495 5.437060 GCACATAGGACCTCTCCAAAATTA 58.563 41.667 0.00 0.00 39.39 1.40
495 496 5.529060 GCACATAGGACCTCTCCAAAATTAG 59.471 44.000 0.00 0.00 39.39 1.73
496 497 6.632672 GCACATAGGACCTCTCCAAAATTAGA 60.633 42.308 0.00 0.00 39.39 2.10
497 498 6.763610 CACATAGGACCTCTCCAAAATTAGAC 59.236 42.308 0.00 0.00 39.39 2.59
498 499 6.443849 ACATAGGACCTCTCCAAAATTAGACA 59.556 38.462 0.00 0.00 39.39 3.41
499 500 5.428184 AGGACCTCTCCAAAATTAGACAG 57.572 43.478 0.00 0.00 39.39 3.51
500 501 4.226168 AGGACCTCTCCAAAATTAGACAGG 59.774 45.833 0.00 0.00 39.39 4.00
501 502 3.942115 GACCTCTCCAAAATTAGACAGGC 59.058 47.826 0.00 0.00 0.00 4.85
502 503 3.589288 ACCTCTCCAAAATTAGACAGGCT 59.411 43.478 0.00 0.00 0.00 4.58
503 504 3.944015 CCTCTCCAAAATTAGACAGGCTG 59.056 47.826 14.16 14.16 0.00 4.85
504 505 4.323792 CCTCTCCAAAATTAGACAGGCTGA 60.324 45.833 23.66 0.00 0.00 4.26
505 506 5.435291 CTCTCCAAAATTAGACAGGCTGAT 58.565 41.667 23.66 11.81 0.00 2.90
506 507 5.188434 TCTCCAAAATTAGACAGGCTGATG 58.812 41.667 23.66 6.45 0.00 3.07
507 508 4.272489 TCCAAAATTAGACAGGCTGATGG 58.728 43.478 23.66 14.37 0.00 3.51
508 509 3.382546 CCAAAATTAGACAGGCTGATGGG 59.617 47.826 23.66 5.30 0.00 4.00
509 510 2.355010 AATTAGACAGGCTGATGGGC 57.645 50.000 23.66 4.82 41.20 5.36
516 517 4.637771 GGCTGATGGGCTAAACGT 57.362 55.556 0.00 0.00 37.53 3.99
517 518 2.098293 GGCTGATGGGCTAAACGTG 58.902 57.895 0.00 0.00 37.53 4.49
518 519 1.429423 GCTGATGGGCTAAACGTGC 59.571 57.895 0.00 0.00 0.00 5.34
519 520 1.026718 GCTGATGGGCTAAACGTGCT 61.027 55.000 0.00 0.00 0.00 4.40
520 521 0.729116 CTGATGGGCTAAACGTGCTG 59.271 55.000 0.00 0.00 0.00 4.41
521 522 0.323302 TGATGGGCTAAACGTGCTGA 59.677 50.000 0.00 0.00 0.00 4.26
522 523 1.065491 TGATGGGCTAAACGTGCTGAT 60.065 47.619 0.00 0.00 0.00 2.90
523 524 1.331756 GATGGGCTAAACGTGCTGATG 59.668 52.381 0.00 0.00 0.00 3.07
524 525 0.036164 TGGGCTAAACGTGCTGATGT 59.964 50.000 0.00 0.00 0.00 3.06
525 526 0.447801 GGGCTAAACGTGCTGATGTG 59.552 55.000 0.00 0.00 0.00 3.21
526 527 0.179189 GGCTAAACGTGCTGATGTGC 60.179 55.000 0.00 0.00 0.00 4.57
527 528 0.179189 GCTAAACGTGCTGATGTGCC 60.179 55.000 0.00 0.00 0.00 5.01
528 529 0.095245 CTAAACGTGCTGATGTGCCG 59.905 55.000 0.00 0.00 34.52 5.69
529 530 1.295357 TAAACGTGCTGATGTGCCGG 61.295 55.000 0.00 0.00 33.33 6.13
536 537 4.652131 TGATGTGCCGGCCCGTTT 62.652 61.111 26.77 3.75 0.00 3.60
537 538 3.810896 GATGTGCCGGCCCGTTTC 61.811 66.667 26.77 10.07 0.00 2.78
543 544 2.596338 CCGGCCCGTTTCCTTGTT 60.596 61.111 0.85 0.00 0.00 2.83
544 545 2.642700 CGGCCCGTTTCCTTGTTG 59.357 61.111 0.00 0.00 0.00 3.33
545 546 2.338620 GGCCCGTTTCCTTGTTGC 59.661 61.111 0.00 0.00 0.00 4.17
546 547 2.050442 GCCCGTTTCCTTGTTGCG 60.050 61.111 0.00 0.00 0.00 4.85
547 548 2.050442 CCCGTTTCCTTGTTGCGC 60.050 61.111 0.00 0.00 0.00 6.09
548 549 2.050442 CCGTTTCCTTGTTGCGCC 60.050 61.111 4.18 0.00 0.00 6.53
549 550 2.718731 CGTTTCCTTGTTGCGCCA 59.281 55.556 4.18 0.00 0.00 5.69
550 551 1.285641 CGTTTCCTTGTTGCGCCAT 59.714 52.632 4.18 0.00 0.00 4.40
551 552 1.003262 CGTTTCCTTGTTGCGCCATG 61.003 55.000 4.18 0.00 0.00 3.66
552 553 1.006337 TTTCCTTGTTGCGCCATGC 60.006 52.632 4.18 0.00 46.70 4.06
553 554 2.433231 TTTCCTTGTTGCGCCATGCC 62.433 55.000 4.18 0.00 45.60 4.40
554 555 3.376078 CCTTGTTGCGCCATGCCT 61.376 61.111 4.18 0.00 45.60 4.75
555 556 2.126228 CTTGTTGCGCCATGCCTG 60.126 61.111 4.18 0.00 45.60 4.85
556 557 3.636313 CTTGTTGCGCCATGCCTGG 62.636 63.158 4.18 3.22 45.60 4.45
645 646 3.018423 AGGGTCTGTGAAGTGCTTTTT 57.982 42.857 0.00 0.00 0.00 1.94
1750 1753 7.772332 AACAGTTAGTACAAAGTTGAGACAG 57.228 36.000 0.00 0.00 0.00 3.51
1762 1765 7.287696 ACAAAGTTGAGACAGTTATTTTGGGAT 59.712 33.333 0.00 0.00 0.00 3.85
1822 1825 2.549992 CCTGCAGTTACTAACCTGTGCA 60.550 50.000 13.81 11.70 37.63 4.57
2247 2250 6.488006 CAGTATAAATTCCATAACCTGCTGCT 59.512 38.462 0.00 0.00 0.00 4.24
2571 2574 8.557029 GTGGAGTAATTTATGTGCCATTACTAC 58.443 37.037 6.57 6.57 41.65 2.73
2619 2622 5.180492 GTCACCCGATAAACAATCAAAGACA 59.820 40.000 0.00 0.00 33.87 3.41
2647 2650 7.189693 TGTTCTGTGTGATGTAAGCTAAAAG 57.810 36.000 0.00 0.00 0.00 2.27
2824 2827 5.189145 ACTGGAACCTAAGAAACACGGATAT 59.811 40.000 0.00 0.00 0.00 1.63
2828 2831 5.687166 ACCTAAGAAACACGGATATGGAA 57.313 39.130 0.00 0.00 0.00 3.53
2890 2893 4.724279 AAATAGCCATTTCGGGGATACT 57.276 40.909 0.00 0.00 34.06 2.12
2901 2904 7.500227 CCATTTCGGGGATACTACGAGTATATA 59.500 40.741 7.29 0.00 41.21 0.86
2902 2905 8.896744 CATTTCGGGGATACTACGAGTATATAA 58.103 37.037 7.29 0.00 41.21 0.98
2904 2907 8.498054 TTCGGGGATACTACGAGTATATAAAG 57.502 38.462 7.29 1.72 41.21 1.85
2905 2908 7.050377 TCGGGGATACTACGAGTATATAAAGG 58.950 42.308 7.29 0.00 41.21 3.11
2907 2910 6.040278 GGGGATACTACGAGTATATAAAGGGC 59.960 46.154 7.29 0.00 41.21 5.19
2911 5852 3.679824 ACGAGTATATAAAGGGCAGCC 57.320 47.619 1.26 1.26 0.00 4.85
2923 5864 2.045045 GCAGCCCCAGTGCATGTA 60.045 61.111 0.00 0.00 40.86 2.29
2925 5866 2.117156 CAGCCCCAGTGCATGTAGC 61.117 63.158 0.00 0.00 45.96 3.58
2926 5867 2.273449 GCCCCAGTGCATGTAGCT 59.727 61.111 0.00 0.00 45.94 3.32
2928 5869 1.153086 CCCCAGTGCATGTAGCTCC 60.153 63.158 0.00 0.00 45.94 4.70
2929 5870 1.153086 CCCAGTGCATGTAGCTCCC 60.153 63.158 0.00 0.00 45.94 4.30
2930 5871 1.522355 CCAGTGCATGTAGCTCCCG 60.522 63.158 0.00 0.00 45.94 5.14
2931 5872 2.176273 CAGTGCATGTAGCTCCCGC 61.176 63.158 0.00 0.00 45.94 6.13
2933 5874 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
2934 5875 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
2935 5876 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
2936 5877 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
2951 5892 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
2952 5893 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
2954 5895 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
2955 5896 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
2956 5897 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
2958 5899 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
2959 5900 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
2961 5902 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
2962 5903 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
2963 5904 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
2964 5905 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
2966 5907 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
2968 5909 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
2969 5910 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
2979 5920 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
2980 5921 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
2981 5922 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
2983 5924 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
2984 5925 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
2985 5926 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
2986 5927 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
2987 5928 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
2988 5929 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
2989 5930 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
2990 5931 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
2991 5932 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
2992 5933 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
2993 5934 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
2994 5935 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
2996 5937 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
2997 5938 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
2998 5939 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
2999 5940 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
3001 5942 2.424956 CAGCCTTTCCCTACATTTCTGC 59.575 50.000 0.00 0.00 0.00 4.26
3002 5943 2.041620 AGCCTTTCCCTACATTTCTGCA 59.958 45.455 0.00 0.00 0.00 4.41
3004 5945 3.119352 GCCTTTCCCTACATTTCTGCAAG 60.119 47.826 0.00 0.00 0.00 4.01
3005 5946 4.335416 CCTTTCCCTACATTTCTGCAAGA 58.665 43.478 0.00 0.00 44.68 3.02
3339 6474 7.975058 CACAATATCATGTAGCCAATCAAAACA 59.025 33.333 0.00 0.00 30.84 2.83
3475 6618 1.366111 CGTGATTGCCGTTGGTAGGG 61.366 60.000 0.00 0.00 0.00 3.53
3541 6684 1.141019 GCGTTGATCTAGGCGGTGA 59.859 57.895 6.11 0.00 0.00 4.02
3751 6906 2.279918 GCGTGTCACCGTGTCCTT 60.280 61.111 0.00 0.00 0.00 3.36
3818 6974 0.035152 AGATTGGAACCGATGCTGCA 60.035 50.000 4.13 4.13 0.00 4.41
4615 7776 4.320608 ACCACCAGTAAGTTGCATTTTG 57.679 40.909 0.00 0.00 0.00 2.44
4677 7838 8.410912 ACACTTGAGTAGTATTATCGTTATGCA 58.589 33.333 0.00 0.00 34.56 3.96
4678 7839 9.411801 CACTTGAGTAGTATTATCGTTATGCAT 57.588 33.333 3.79 3.79 34.56 3.96
4679 7840 9.411801 ACTTGAGTAGTATTATCGTTATGCATG 57.588 33.333 10.16 0.00 34.56 4.06
4680 7841 7.812309 TGAGTAGTATTATCGTTATGCATGC 57.188 36.000 11.82 11.82 0.00 4.06
4681 7842 7.602753 TGAGTAGTATTATCGTTATGCATGCT 58.397 34.615 20.33 7.07 0.00 3.79
4682 7843 7.542130 TGAGTAGTATTATCGTTATGCATGCTG 59.458 37.037 20.33 3.78 0.00 4.41
4683 7844 7.602753 AGTAGTATTATCGTTATGCATGCTGA 58.397 34.615 20.33 9.20 0.00 4.26
4684 7845 6.957984 AGTATTATCGTTATGCATGCTGAG 57.042 37.500 20.33 6.09 0.00 3.35
4685 7846 6.459066 AGTATTATCGTTATGCATGCTGAGT 58.541 36.000 20.33 5.03 0.00 3.41
4686 7847 7.602753 AGTATTATCGTTATGCATGCTGAGTA 58.397 34.615 20.33 0.00 0.00 2.59
4687 7848 8.253810 AGTATTATCGTTATGCATGCTGAGTAT 58.746 33.333 20.33 5.95 0.00 2.12
4688 7849 6.710692 TTATCGTTATGCATGCTGAGTATG 57.289 37.500 20.33 6.14 0.00 2.39
4840 8015 4.829064 TTGTTATGCCAACTGAACTGTC 57.171 40.909 0.65 0.00 0.00 3.51
4995 8170 4.963276 TGCAGTTACATGCCAATAAGTC 57.037 40.909 0.00 0.00 45.91 3.01
4996 8171 4.588899 TGCAGTTACATGCCAATAAGTCT 58.411 39.130 0.00 0.00 45.91 3.24
4997 8172 4.395854 TGCAGTTACATGCCAATAAGTCTG 59.604 41.667 0.00 0.00 45.91 3.51
4998 8173 4.635765 GCAGTTACATGCCAATAAGTCTGA 59.364 41.667 0.00 0.00 40.43 3.27
4999 8174 5.297776 GCAGTTACATGCCAATAAGTCTGAT 59.702 40.000 0.00 0.00 40.43 2.90
5000 8175 6.722301 CAGTTACATGCCAATAAGTCTGATG 58.278 40.000 0.00 0.00 0.00 3.07
5001 8176 5.297776 AGTTACATGCCAATAAGTCTGATGC 59.702 40.000 0.00 0.00 0.00 3.91
5314 8489 4.982241 TTTCAACATCTCTGAAGGGTCT 57.018 40.909 0.00 0.00 34.41 3.85
5315 8490 3.969287 TCAACATCTCTGAAGGGTCTG 57.031 47.619 0.00 0.00 0.00 3.51
5316 8491 3.242867 TCAACATCTCTGAAGGGTCTGT 58.757 45.455 0.00 0.00 0.00 3.41
5317 8492 3.007290 TCAACATCTCTGAAGGGTCTGTG 59.993 47.826 0.00 0.00 0.00 3.66
5318 8493 1.277557 ACATCTCTGAAGGGTCTGTGC 59.722 52.381 0.00 0.00 0.00 4.57
5319 8494 1.554160 CATCTCTGAAGGGTCTGTGCT 59.446 52.381 0.00 0.00 0.00 4.40
5320 8495 1.722034 TCTCTGAAGGGTCTGTGCTT 58.278 50.000 0.00 0.00 0.00 3.91
5321 8496 2.050144 TCTCTGAAGGGTCTGTGCTTT 58.950 47.619 0.00 0.00 0.00 3.51
5322 8497 2.149578 CTCTGAAGGGTCTGTGCTTTG 58.850 52.381 0.00 0.00 0.00 2.77
5323 8498 1.490490 TCTGAAGGGTCTGTGCTTTGT 59.510 47.619 0.00 0.00 0.00 2.83
5324 8499 1.605710 CTGAAGGGTCTGTGCTTTGTG 59.394 52.381 0.00 0.00 0.00 3.33
5325 8500 0.954452 GAAGGGTCTGTGCTTTGTGG 59.046 55.000 0.00 0.00 0.00 4.17
5326 8501 0.258774 AAGGGTCTGTGCTTTGTGGT 59.741 50.000 0.00 0.00 0.00 4.16
5453 8628 6.463995 TGTTTATGCTTGTTCCACTTTCTT 57.536 33.333 0.00 0.00 0.00 2.52
5520 8695 3.211045 GTGTTTGAAGTACTGGGCAGAA 58.789 45.455 0.00 0.00 0.00 3.02
5733 8929 9.046296 GTCTCAAGATTCTTCAGAGTTTTTACA 57.954 33.333 0.00 0.00 31.75 2.41
6240 9436 3.759618 TCACCAGCCTTAATTTTAACCCG 59.240 43.478 0.00 0.00 0.00 5.28
6316 9512 8.668510 AGAAACATATACATTAGCAGGTCTTG 57.331 34.615 0.00 0.00 0.00 3.02
6358 9554 5.587844 CAGAATACTTTCTTCCCCTGTGATG 59.412 44.000 0.00 0.00 40.28 3.07
6447 9643 7.000472 CCCATGTGACTATTCAAATCCTACAT 59.000 38.462 0.00 0.00 31.90 2.29
6575 9771 6.317391 TGCATGAAATCGGAATGTACACATTA 59.683 34.615 7.55 0.00 45.72 1.90
6829 10025 3.897141 AAGGTCTTCAGTAAGCCTAGC 57.103 47.619 0.00 0.00 37.90 3.42
6833 10029 3.898741 GGTCTTCAGTAAGCCTAGCCTAT 59.101 47.826 0.00 0.00 32.36 2.57
7054 10250 3.130340 GTGGAAACAGTTCACATGGTTGT 59.870 43.478 0.00 0.00 44.46 3.32
7731 10927 4.060205 GGTAAGTTTGTTTGCTCCGAGTA 58.940 43.478 0.00 0.00 0.00 2.59
7732 10928 4.512571 GGTAAGTTTGTTTGCTCCGAGTAA 59.487 41.667 0.00 0.00 0.00 2.24
7853 11049 3.118334 CCAGATGCTTCTCTGACAAGGAT 60.118 47.826 11.53 0.00 44.48 3.24
7989 11187 6.681729 TTACATAGGTTCAGGTCAGAGTTT 57.318 37.500 0.00 0.00 0.00 2.66
8053 11251 9.185680 ACACCCTTTACCTATGATAATTTTCAC 57.814 33.333 0.33 0.00 0.00 3.18
8054 11252 9.184523 CACCCTTTACCTATGATAATTTTCACA 57.815 33.333 0.33 0.00 0.00 3.58
8163 11361 1.207089 CTCTTGAGCCGTGGACCATAA 59.793 52.381 0.00 0.00 0.00 1.90
8164 11362 1.837439 TCTTGAGCCGTGGACCATAAT 59.163 47.619 0.00 0.00 0.00 1.28
8165 11363 1.942657 CTTGAGCCGTGGACCATAATG 59.057 52.381 0.00 0.00 0.00 1.90
8166 11364 0.463654 TGAGCCGTGGACCATAATGC 60.464 55.000 0.00 0.00 0.00 3.56
8167 11365 0.179045 GAGCCGTGGACCATAATGCT 60.179 55.000 0.00 3.48 0.00 3.79
8168 11366 1.070134 GAGCCGTGGACCATAATGCTA 59.930 52.381 0.00 0.00 0.00 3.49
8170 11368 2.106511 AGCCGTGGACCATAATGCTATT 59.893 45.455 0.00 0.00 0.00 1.73
8171 11369 3.326588 AGCCGTGGACCATAATGCTATTA 59.673 43.478 0.00 0.00 0.00 0.98
8172 11370 4.019321 AGCCGTGGACCATAATGCTATTAT 60.019 41.667 0.00 0.00 0.00 1.28
8173 11371 4.094887 GCCGTGGACCATAATGCTATTATG 59.905 45.833 15.98 15.98 33.39 1.90
8174 11372 4.094887 CCGTGGACCATAATGCTATTATGC 59.905 45.833 16.87 9.04 32.51 3.14
8178 11376 4.096984 GGACCATAATGCTATTATGCTGCC 59.903 45.833 16.87 14.10 32.51 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.721926 GTCTTCAAGAAGAGAACGGCG 59.278 52.381 12.50 4.80 46.93 6.46
1 2 1.721926 CGTCTTCAAGAAGAGAACGGC 59.278 52.381 12.50 0.15 46.93 5.68
3 4 2.652642 CGACGTCTTCAAGAAGAGAACG 59.347 50.000 14.70 14.68 46.93 3.95
5 6 2.607282 GGCGACGTCTTCAAGAAGAGAA 60.607 50.000 14.70 0.00 46.93 2.87
6 7 1.068472 GGCGACGTCTTCAAGAAGAGA 60.068 52.381 14.70 0.00 46.93 3.10
7 8 1.341606 GGCGACGTCTTCAAGAAGAG 58.658 55.000 14.70 9.44 46.93 2.85
8 9 3.491581 GGCGACGTCTTCAAGAAGA 57.508 52.632 14.70 8.37 44.47 2.87
21 22 3.692406 AAGGAGGTCCACGGCGAC 61.692 66.667 16.62 0.00 38.89 5.19
22 23 3.691342 CAAGGAGGTCCACGGCGA 61.691 66.667 16.62 0.00 38.89 5.54
25 26 4.760047 CGGCAAGGAGGTCCACGG 62.760 72.222 0.00 0.00 38.89 4.94
30 31 4.373116 TGACGCGGCAAGGAGGTC 62.373 66.667 15.11 0.00 0.00 3.85
31 32 4.379243 CTGACGCGGCAAGGAGGT 62.379 66.667 19.01 0.00 0.00 3.85
32 33 3.997064 CTCTGACGCGGCAAGGAGG 62.997 68.421 19.01 3.29 0.00 4.30
33 34 2.507992 CTCTGACGCGGCAAGGAG 60.508 66.667 19.01 17.13 0.00 3.69
34 35 2.765250 GAACTCTGACGCGGCAAGGA 62.765 60.000 19.01 10.41 0.00 3.36
35 36 2.357517 AACTCTGACGCGGCAAGG 60.358 61.111 19.01 14.54 0.00 3.61
36 37 2.383527 GGAACTCTGACGCGGCAAG 61.384 63.158 19.01 18.73 0.00 4.01
37 38 2.357034 GGAACTCTGACGCGGCAA 60.357 61.111 19.01 6.36 0.00 4.52
38 39 4.717629 CGGAACTCTGACGCGGCA 62.718 66.667 17.01 17.01 0.00 5.69
40 41 4.796231 CCCGGAACTCTGACGCGG 62.796 72.222 12.47 0.00 0.00 6.46
41 42 4.052229 ACCCGGAACTCTGACGCG 62.052 66.667 0.73 3.53 0.00 6.01
42 43 2.430382 TTCACCCGGAACTCTGACGC 62.430 60.000 0.73 0.00 0.00 5.19
43 44 0.388649 CTTCACCCGGAACTCTGACG 60.389 60.000 0.73 0.00 0.00 4.35
44 45 0.966920 TCTTCACCCGGAACTCTGAC 59.033 55.000 0.73 0.00 0.00 3.51
45 46 0.966920 GTCTTCACCCGGAACTCTGA 59.033 55.000 0.73 0.00 0.00 3.27
46 47 0.037232 GGTCTTCACCCGGAACTCTG 60.037 60.000 0.73 0.00 36.54 3.35
47 48 2.363297 GGTCTTCACCCGGAACTCT 58.637 57.895 0.73 0.00 36.54 3.24
56 57 2.359975 CGGGCAAGGGTCTTCACC 60.360 66.667 0.00 0.00 42.90 4.02
57 58 2.359975 CCGGGCAAGGGTCTTCAC 60.360 66.667 0.00 0.00 0.00 3.18
58 59 2.852075 ACCGGGCAAGGGTCTTCA 60.852 61.111 6.32 0.00 29.94 3.02
59 60 2.359975 CACCGGGCAAGGGTCTTC 60.360 66.667 6.32 0.00 34.97 2.87
60 61 3.966543 CCACCGGGCAAGGGTCTT 61.967 66.667 6.32 0.00 34.97 3.01
96 97 0.868406 AGAGAGAAAACGGCGCAAAG 59.132 50.000 10.83 1.82 0.00 2.77
97 98 1.002900 CAAGAGAGAAAACGGCGCAAA 60.003 47.619 10.83 0.00 0.00 3.68
98 99 0.586319 CAAGAGAGAAAACGGCGCAA 59.414 50.000 10.83 0.00 0.00 4.85
99 100 1.227999 CCAAGAGAGAAAACGGCGCA 61.228 55.000 10.83 0.00 0.00 6.09
100 101 1.497722 CCAAGAGAGAAAACGGCGC 59.502 57.895 6.90 0.00 0.00 6.53
101 102 1.298859 CCCCAAGAGAGAAAACGGCG 61.299 60.000 4.80 4.80 0.00 6.46
102 103 0.960861 CCCCCAAGAGAGAAAACGGC 60.961 60.000 0.00 0.00 0.00 5.68
103 104 0.960861 GCCCCCAAGAGAGAAAACGG 60.961 60.000 0.00 0.00 0.00 4.44
104 105 1.298859 CGCCCCCAAGAGAGAAAACG 61.299 60.000 0.00 0.00 0.00 3.60
105 106 0.250770 ACGCCCCCAAGAGAGAAAAC 60.251 55.000 0.00 0.00 0.00 2.43
106 107 0.476771 AACGCCCCCAAGAGAGAAAA 59.523 50.000 0.00 0.00 0.00 2.29
107 108 0.250727 CAACGCCCCCAAGAGAGAAA 60.251 55.000 0.00 0.00 0.00 2.52
108 109 1.374947 CAACGCCCCCAAGAGAGAA 59.625 57.895 0.00 0.00 0.00 2.87
109 110 1.827399 GACAACGCCCCCAAGAGAGA 61.827 60.000 0.00 0.00 0.00 3.10
110 111 1.376037 GACAACGCCCCCAAGAGAG 60.376 63.158 0.00 0.00 0.00 3.20
111 112 0.543410 TAGACAACGCCCCCAAGAGA 60.543 55.000 0.00 0.00 0.00 3.10
112 113 0.108138 CTAGACAACGCCCCCAAGAG 60.108 60.000 0.00 0.00 0.00 2.85
113 114 0.543410 TCTAGACAACGCCCCCAAGA 60.543 55.000 0.00 0.00 0.00 3.02
114 115 0.323629 TTCTAGACAACGCCCCCAAG 59.676 55.000 0.00 0.00 0.00 3.61
115 116 0.323629 CTTCTAGACAACGCCCCCAA 59.676 55.000 0.00 0.00 0.00 4.12
116 117 1.980052 CTTCTAGACAACGCCCCCA 59.020 57.895 0.00 0.00 0.00 4.96
117 118 1.449778 GCTTCTAGACAACGCCCCC 60.450 63.158 0.00 0.00 0.00 5.40
118 119 0.036294 AAGCTTCTAGACAACGCCCC 60.036 55.000 0.00 0.00 0.00 5.80
119 120 2.541556 CTAAGCTTCTAGACAACGCCC 58.458 52.381 0.00 0.00 0.00 6.13
120 121 2.094130 ACCTAAGCTTCTAGACAACGCC 60.094 50.000 0.00 0.00 0.00 5.68
121 122 2.924290 CACCTAAGCTTCTAGACAACGC 59.076 50.000 0.00 0.00 0.00 4.84
122 123 4.167268 GACACCTAAGCTTCTAGACAACG 58.833 47.826 0.00 0.00 0.00 4.10
123 124 4.221041 AGGACACCTAAGCTTCTAGACAAC 59.779 45.833 0.00 0.00 28.47 3.32
124 125 4.417437 AGGACACCTAAGCTTCTAGACAA 58.583 43.478 0.00 0.00 28.47 3.18
125 126 4.048970 AGGACACCTAAGCTTCTAGACA 57.951 45.455 0.00 0.00 28.47 3.41
126 127 4.581409 CCTAGGACACCTAAGCTTCTAGAC 59.419 50.000 1.05 0.00 35.49 2.59
127 128 4.386536 CCCTAGGACACCTAAGCTTCTAGA 60.387 50.000 11.48 0.00 35.49 2.43
128 129 3.892588 CCCTAGGACACCTAAGCTTCTAG 59.107 52.174 11.48 5.69 35.49 2.43
129 130 3.271490 ACCCTAGGACACCTAAGCTTCTA 59.729 47.826 11.48 0.00 35.49 2.10
130 131 2.044630 ACCCTAGGACACCTAAGCTTCT 59.955 50.000 11.48 0.00 35.49 2.85
131 132 2.168728 CACCCTAGGACACCTAAGCTTC 59.831 54.545 11.48 0.00 35.49 3.86
132 133 2.188817 CACCCTAGGACACCTAAGCTT 58.811 52.381 11.48 3.48 35.49 3.74
133 134 1.078989 ACACCCTAGGACACCTAAGCT 59.921 52.381 11.48 0.00 35.49 3.74
134 135 1.569653 ACACCCTAGGACACCTAAGC 58.430 55.000 11.48 0.00 35.49 3.09
135 136 2.354805 GCAACACCCTAGGACACCTAAG 60.355 54.545 11.48 0.00 35.49 2.18
136 137 1.626825 GCAACACCCTAGGACACCTAA 59.373 52.381 11.48 0.00 35.49 2.69
137 138 1.272807 GCAACACCCTAGGACACCTA 58.727 55.000 11.48 0.00 34.61 3.08
138 139 1.827399 CGCAACACCCTAGGACACCT 61.827 60.000 11.48 0.00 37.71 4.00
139 140 1.375523 CGCAACACCCTAGGACACC 60.376 63.158 11.48 0.00 0.00 4.16
140 141 0.949105 CACGCAACACCCTAGGACAC 60.949 60.000 11.48 0.00 0.00 3.67
141 142 1.116536 TCACGCAACACCCTAGGACA 61.117 55.000 11.48 0.00 0.00 4.02
142 143 0.249398 ATCACGCAACACCCTAGGAC 59.751 55.000 11.48 0.00 0.00 3.85
143 144 0.981183 AATCACGCAACACCCTAGGA 59.019 50.000 11.48 0.00 0.00 2.94
144 145 1.086696 CAATCACGCAACACCCTAGG 58.913 55.000 0.06 0.06 0.00 3.02
145 146 1.464608 CACAATCACGCAACACCCTAG 59.535 52.381 0.00 0.00 0.00 3.02
146 147 1.518325 CACAATCACGCAACACCCTA 58.482 50.000 0.00 0.00 0.00 3.53
147 148 1.795170 GCACAATCACGCAACACCCT 61.795 55.000 0.00 0.00 0.00 4.34
148 149 1.371635 GCACAATCACGCAACACCC 60.372 57.895 0.00 0.00 0.00 4.61
149 150 0.385974 GAGCACAATCACGCAACACC 60.386 55.000 0.00 0.00 0.00 4.16
150 151 0.385974 GGAGCACAATCACGCAACAC 60.386 55.000 0.00 0.00 0.00 3.32
151 152 0.817229 TGGAGCACAATCACGCAACA 60.817 50.000 0.00 0.00 0.00 3.33
152 153 0.523072 ATGGAGCACAATCACGCAAC 59.477 50.000 0.00 0.00 0.00 4.17
153 154 1.199789 GAATGGAGCACAATCACGCAA 59.800 47.619 0.00 0.00 0.00 4.85
154 155 0.804364 GAATGGAGCACAATCACGCA 59.196 50.000 0.00 0.00 0.00 5.24
155 156 1.063174 GAGAATGGAGCACAATCACGC 59.937 52.381 0.00 0.00 31.16 5.34
156 157 1.667724 GGAGAATGGAGCACAATCACG 59.332 52.381 0.00 0.00 31.16 4.35
157 158 2.019984 GGGAGAATGGAGCACAATCAC 58.980 52.381 0.00 0.00 31.16 3.06
158 159 1.918262 AGGGAGAATGGAGCACAATCA 59.082 47.619 0.00 0.00 31.16 2.57
159 160 2.295885 CAGGGAGAATGGAGCACAATC 58.704 52.381 0.00 0.00 0.00 2.67
160 161 1.637553 ACAGGGAGAATGGAGCACAAT 59.362 47.619 0.00 0.00 0.00 2.71
161 162 1.067295 ACAGGGAGAATGGAGCACAA 58.933 50.000 0.00 0.00 0.00 3.33
162 163 0.325933 CACAGGGAGAATGGAGCACA 59.674 55.000 0.00 0.00 0.00 4.57
163 164 0.326264 ACACAGGGAGAATGGAGCAC 59.674 55.000 0.00 0.00 0.00 4.40
164 165 1.003580 GAACACAGGGAGAATGGAGCA 59.996 52.381 0.00 0.00 0.00 4.26
165 166 1.280421 AGAACACAGGGAGAATGGAGC 59.720 52.381 0.00 0.00 0.00 4.70
166 167 3.604582 GAAGAACACAGGGAGAATGGAG 58.395 50.000 0.00 0.00 0.00 3.86
167 168 2.028112 CGAAGAACACAGGGAGAATGGA 60.028 50.000 0.00 0.00 0.00 3.41
168 169 2.350522 CGAAGAACACAGGGAGAATGG 58.649 52.381 0.00 0.00 0.00 3.16
169 170 2.289694 ACCGAAGAACACAGGGAGAATG 60.290 50.000 0.00 0.00 0.00 2.67
170 171 1.978580 ACCGAAGAACACAGGGAGAAT 59.021 47.619 0.00 0.00 0.00 2.40
171 172 1.420430 ACCGAAGAACACAGGGAGAA 58.580 50.000 0.00 0.00 0.00 2.87
172 173 2.168496 CTACCGAAGAACACAGGGAGA 58.832 52.381 0.00 0.00 36.85 3.71
173 174 1.404315 GCTACCGAAGAACACAGGGAG 60.404 57.143 0.00 0.00 37.76 4.30
174 175 0.606604 GCTACCGAAGAACACAGGGA 59.393 55.000 0.00 0.00 0.00 4.20
175 176 0.736325 CGCTACCGAAGAACACAGGG 60.736 60.000 0.00 0.00 36.29 4.45
176 177 1.352156 GCGCTACCGAAGAACACAGG 61.352 60.000 0.00 0.00 36.29 4.00
177 178 0.666274 TGCGCTACCGAAGAACACAG 60.666 55.000 9.73 0.00 36.29 3.66
178 179 0.666274 CTGCGCTACCGAAGAACACA 60.666 55.000 9.73 0.00 43.05 3.72
179 180 0.666577 ACTGCGCTACCGAAGAACAC 60.667 55.000 9.73 0.00 43.05 3.32
180 181 0.032952 AACTGCGCTACCGAAGAACA 59.967 50.000 9.73 0.00 43.05 3.18
181 182 0.438830 CAACTGCGCTACCGAAGAAC 59.561 55.000 9.73 0.00 43.05 3.01
182 183 1.289109 GCAACTGCGCTACCGAAGAA 61.289 55.000 9.73 0.00 43.05 2.52
183 184 1.736645 GCAACTGCGCTACCGAAGA 60.737 57.895 9.73 0.00 43.05 2.87
184 185 1.291877 AAGCAACTGCGCTACCGAAG 61.292 55.000 9.73 0.00 45.93 3.79
195 196 3.742290 CGAAGCAGACAAGCAACTG 57.258 52.632 0.00 0.00 36.85 3.16
209 210 1.300233 GGCTACCCAGATCGCGAAG 60.300 63.158 15.24 4.90 0.00 3.79
210 211 0.466739 TAGGCTACCCAGATCGCGAA 60.467 55.000 15.24 0.00 0.00 4.70
211 212 0.889638 CTAGGCTACCCAGATCGCGA 60.890 60.000 13.09 13.09 0.00 5.87
212 213 1.581954 CTAGGCTACCCAGATCGCG 59.418 63.158 0.00 0.00 0.00 5.87
213 214 0.539901 TCCTAGGCTACCCAGATCGC 60.540 60.000 2.96 0.00 0.00 4.58
214 215 2.096248 GATCCTAGGCTACCCAGATCG 58.904 57.143 2.96 0.00 30.11 3.69
215 216 3.096092 CAGATCCTAGGCTACCCAGATC 58.904 54.545 2.96 0.00 35.93 2.75
216 217 2.825072 GCAGATCCTAGGCTACCCAGAT 60.825 54.545 2.96 0.00 0.00 2.90
217 218 1.481428 GCAGATCCTAGGCTACCCAGA 60.481 57.143 2.96 0.00 0.00 3.86
218 219 0.972883 GCAGATCCTAGGCTACCCAG 59.027 60.000 2.96 0.00 0.00 4.45
219 220 0.563173 AGCAGATCCTAGGCTACCCA 59.437 55.000 2.96 0.00 35.82 4.51
220 221 1.723288 AAGCAGATCCTAGGCTACCC 58.277 55.000 2.96 0.00 36.76 3.69
221 222 2.436173 ACAAAGCAGATCCTAGGCTACC 59.564 50.000 2.96 0.00 36.76 3.18
222 223 3.828875 ACAAAGCAGATCCTAGGCTAC 57.171 47.619 2.96 0.00 36.76 3.58
223 224 5.208890 TCTTACAAAGCAGATCCTAGGCTA 58.791 41.667 2.96 0.00 36.76 3.93
224 225 4.033709 TCTTACAAAGCAGATCCTAGGCT 58.966 43.478 2.96 0.00 40.14 4.58
225 226 4.376146 CTCTTACAAAGCAGATCCTAGGC 58.624 47.826 2.96 0.00 0.00 3.93
226 227 4.651503 TCCTCTTACAAAGCAGATCCTAGG 59.348 45.833 0.82 0.82 0.00 3.02
227 228 5.860941 TCCTCTTACAAAGCAGATCCTAG 57.139 43.478 0.00 0.00 0.00 3.02
228 229 5.899547 TGATCCTCTTACAAAGCAGATCCTA 59.100 40.000 12.35 0.00 36.63 2.94
229 230 4.718774 TGATCCTCTTACAAAGCAGATCCT 59.281 41.667 12.35 0.00 36.63 3.24
230 231 4.813697 GTGATCCTCTTACAAAGCAGATCC 59.186 45.833 12.35 5.04 36.63 3.36
231 232 4.813697 GGTGATCCTCTTACAAAGCAGATC 59.186 45.833 9.81 9.81 37.32 2.75
232 233 4.472833 AGGTGATCCTCTTACAAAGCAGAT 59.527 41.667 0.00 0.00 40.58 2.90
233 234 3.840666 AGGTGATCCTCTTACAAAGCAGA 59.159 43.478 0.00 0.00 40.58 4.26
234 235 4.213564 AGGTGATCCTCTTACAAAGCAG 57.786 45.455 0.00 0.00 40.58 4.24
248 249 4.527509 ACGATACATGATGGAGGTGATC 57.472 45.455 0.00 0.00 0.00 2.92
249 250 4.559502 CGAACGATACATGATGGAGGTGAT 60.560 45.833 0.00 0.00 0.00 3.06
250 251 3.243401 CGAACGATACATGATGGAGGTGA 60.243 47.826 0.00 0.00 0.00 4.02
251 252 3.052745 CGAACGATACATGATGGAGGTG 58.947 50.000 0.00 0.00 0.00 4.00
252 253 2.035961 CCGAACGATACATGATGGAGGT 59.964 50.000 0.00 0.00 0.00 3.85
253 254 2.677199 CCGAACGATACATGATGGAGG 58.323 52.381 0.00 0.00 0.00 4.30
254 255 2.061773 GCCGAACGATACATGATGGAG 58.938 52.381 0.00 0.00 0.00 3.86
255 256 1.270094 GGCCGAACGATACATGATGGA 60.270 52.381 0.00 0.00 0.00 3.41
256 257 1.148310 GGCCGAACGATACATGATGG 58.852 55.000 0.00 0.00 0.00 3.51
257 258 0.784178 CGGCCGAACGATACATGATG 59.216 55.000 24.07 0.00 35.47 3.07
258 259 0.387929 ACGGCCGAACGATACATGAT 59.612 50.000 35.90 0.00 37.61 2.45
259 260 0.526739 CACGGCCGAACGATACATGA 60.527 55.000 35.90 0.00 37.61 3.07
260 261 0.804544 ACACGGCCGAACGATACATG 60.805 55.000 35.90 18.80 37.61 3.21
261 262 0.740149 TACACGGCCGAACGATACAT 59.260 50.000 35.90 1.64 37.61 2.29
262 263 0.740149 ATACACGGCCGAACGATACA 59.260 50.000 35.90 7.77 37.61 2.29
263 264 1.002033 AGATACACGGCCGAACGATAC 60.002 52.381 35.90 15.87 37.61 2.24
264 265 1.311859 AGATACACGGCCGAACGATA 58.688 50.000 35.90 15.96 37.61 2.92
265 266 0.458669 AAGATACACGGCCGAACGAT 59.541 50.000 35.90 18.80 37.61 3.73
266 267 0.457166 CAAGATACACGGCCGAACGA 60.457 55.000 35.90 14.43 37.61 3.85
267 268 0.734942 ACAAGATACACGGCCGAACG 60.735 55.000 35.90 21.75 40.31 3.95
268 269 1.392510 GAACAAGATACACGGCCGAAC 59.607 52.381 35.90 16.95 0.00 3.95
269 270 1.717194 GAACAAGATACACGGCCGAA 58.283 50.000 35.90 17.45 0.00 4.30
270 271 0.457166 CGAACAAGATACACGGCCGA 60.457 55.000 35.90 10.61 0.00 5.54
271 272 1.418342 CCGAACAAGATACACGGCCG 61.418 60.000 26.86 26.86 37.32 6.13
272 273 0.390735 ACCGAACAAGATACACGGCC 60.391 55.000 0.00 0.00 46.18 6.13
273 274 1.435577 AACCGAACAAGATACACGGC 58.564 50.000 0.00 0.00 46.18 5.68
275 276 3.794536 CACAAACCGAACAAGATACACG 58.205 45.455 0.00 0.00 0.00 4.49
276 277 3.551551 GCACAAACCGAACAAGATACAC 58.448 45.455 0.00 0.00 0.00 2.90
277 278 2.550606 GGCACAAACCGAACAAGATACA 59.449 45.455 0.00 0.00 0.00 2.29
278 279 2.812011 AGGCACAAACCGAACAAGATAC 59.188 45.455 0.00 0.00 33.69 2.24
279 280 3.134574 AGGCACAAACCGAACAAGATA 57.865 42.857 0.00 0.00 33.69 1.98
280 281 1.981256 AGGCACAAACCGAACAAGAT 58.019 45.000 0.00 0.00 33.69 2.40
281 282 1.757682 AAGGCACAAACCGAACAAGA 58.242 45.000 0.00 0.00 33.69 3.02
282 283 2.577449 AAAGGCACAAACCGAACAAG 57.423 45.000 0.00 0.00 33.69 3.16
283 284 4.657436 AATAAAGGCACAAACCGAACAA 57.343 36.364 0.00 0.00 33.69 2.83
284 285 4.657436 AAATAAAGGCACAAACCGAACA 57.343 36.364 0.00 0.00 33.69 3.18
285 286 8.745464 TTTATAAATAAAGGCACAAACCGAAC 57.255 30.769 0.00 0.00 33.69 3.95
286 287 8.973835 CTTTATAAATAAAGGCACAAACCGAA 57.026 30.769 12.67 0.00 43.33 4.30
298 299 6.213677 GCTTTCGCCCCCTTTATAAATAAAG 58.786 40.000 13.31 13.31 45.45 1.85
299 300 6.151663 GCTTTCGCCCCCTTTATAAATAAA 57.848 37.500 0.00 0.00 0.00 1.40
300 301 5.777850 GCTTTCGCCCCCTTTATAAATAA 57.222 39.130 0.00 0.00 0.00 1.40
317 318 2.155924 CGACTTCTCGAAACAGGCTTTC 59.844 50.000 0.00 0.00 43.06 2.62
318 319 2.135933 CGACTTCTCGAAACAGGCTTT 58.864 47.619 0.00 0.00 43.06 3.51
319 320 1.068741 ACGACTTCTCGAAACAGGCTT 59.931 47.619 0.00 0.00 43.06 4.35
320 321 0.674534 ACGACTTCTCGAAACAGGCT 59.325 50.000 0.00 0.00 43.06 4.58
321 322 0.784778 CACGACTTCTCGAAACAGGC 59.215 55.000 0.00 0.00 43.06 4.85
322 323 2.287668 ACTCACGACTTCTCGAAACAGG 60.288 50.000 0.00 0.00 43.06 4.00
323 324 3.001395 ACTCACGACTTCTCGAAACAG 57.999 47.619 0.00 0.00 43.06 3.16
324 325 3.369385 GAACTCACGACTTCTCGAAACA 58.631 45.455 0.00 0.00 43.06 2.83
325 326 2.401063 CGAACTCACGACTTCTCGAAAC 59.599 50.000 0.00 0.00 43.06 2.78
326 327 2.288729 TCGAACTCACGACTTCTCGAAA 59.711 45.455 0.00 0.00 43.06 3.46
327 328 1.869132 TCGAACTCACGACTTCTCGAA 59.131 47.619 0.00 0.00 43.06 3.71
328 329 1.505425 TCGAACTCACGACTTCTCGA 58.495 50.000 0.00 0.00 43.06 4.04
329 330 2.311450 TTCGAACTCACGACTTCTCG 57.689 50.000 0.00 0.00 46.06 4.04
330 331 3.172824 GGATTCGAACTCACGACTTCTC 58.827 50.000 0.00 0.00 41.97 2.87
331 332 2.094649 GGGATTCGAACTCACGACTTCT 60.095 50.000 0.00 0.00 41.97 2.85
332 333 2.260481 GGGATTCGAACTCACGACTTC 58.740 52.381 0.00 0.00 41.97 3.01
333 334 1.616865 TGGGATTCGAACTCACGACTT 59.383 47.619 0.00 0.00 41.97 3.01
334 335 1.202582 CTGGGATTCGAACTCACGACT 59.797 52.381 0.00 0.00 41.97 4.18
335 336 1.630148 CTGGGATTCGAACTCACGAC 58.370 55.000 0.00 0.00 41.97 4.34
336 337 0.108804 GCTGGGATTCGAACTCACGA 60.109 55.000 0.00 0.00 40.55 4.35
337 338 1.084370 GGCTGGGATTCGAACTCACG 61.084 60.000 0.00 0.00 0.00 4.35
338 339 0.036388 TGGCTGGGATTCGAACTCAC 60.036 55.000 0.00 1.28 0.00 3.51
339 340 0.036388 GTGGCTGGGATTCGAACTCA 60.036 55.000 0.00 0.00 0.00 3.41
340 341 0.744771 GGTGGCTGGGATTCGAACTC 60.745 60.000 0.00 0.00 0.00 3.01
341 342 1.201429 AGGTGGCTGGGATTCGAACT 61.201 55.000 0.00 0.00 0.00 3.01
342 343 0.322546 AAGGTGGCTGGGATTCGAAC 60.323 55.000 0.00 0.00 0.00 3.95
343 344 0.322456 CAAGGTGGCTGGGATTCGAA 60.322 55.000 0.00 0.00 0.00 3.71
344 345 1.299648 CAAGGTGGCTGGGATTCGA 59.700 57.895 0.00 0.00 0.00 3.71
345 346 0.251916 TACAAGGTGGCTGGGATTCG 59.748 55.000 0.00 0.00 0.00 3.34
346 347 2.736670 ATACAAGGTGGCTGGGATTC 57.263 50.000 0.00 0.00 0.00 2.52
347 348 4.017499 AGTTAATACAAGGTGGCTGGGATT 60.017 41.667 0.00 0.00 0.00 3.01
348 349 3.527665 AGTTAATACAAGGTGGCTGGGAT 59.472 43.478 0.00 0.00 0.00 3.85
349 350 2.916934 AGTTAATACAAGGTGGCTGGGA 59.083 45.455 0.00 0.00 0.00 4.37
350 351 3.366052 AGTTAATACAAGGTGGCTGGG 57.634 47.619 0.00 0.00 0.00 4.45
351 352 5.722021 AAAAGTTAATACAAGGTGGCTGG 57.278 39.130 0.00 0.00 0.00 4.85
352 353 6.420604 CACAAAAAGTTAATACAAGGTGGCTG 59.579 38.462 0.00 0.00 0.00 4.85
353 354 6.322712 TCACAAAAAGTTAATACAAGGTGGCT 59.677 34.615 0.00 0.00 0.00 4.75
354 355 6.508777 TCACAAAAAGTTAATACAAGGTGGC 58.491 36.000 0.00 0.00 0.00 5.01
355 356 9.541143 AAATCACAAAAAGTTAATACAAGGTGG 57.459 29.630 0.00 0.00 0.00 4.61
365 366 8.738554 CGATCGTGAAAAATCACAAAAAGTTAA 58.261 29.630 7.03 0.00 40.42 2.01
366 367 7.096803 GCGATCGTGAAAAATCACAAAAAGTTA 60.097 33.333 17.81 0.00 40.42 2.24
367 368 6.291585 GCGATCGTGAAAAATCACAAAAAGTT 60.292 34.615 17.81 0.00 40.42 2.66
368 369 5.173131 GCGATCGTGAAAAATCACAAAAAGT 59.827 36.000 17.81 0.00 40.42 2.66
369 370 5.172951 TGCGATCGTGAAAAATCACAAAAAG 59.827 36.000 17.81 0.00 40.42 2.27
370 371 5.037385 TGCGATCGTGAAAAATCACAAAAA 58.963 33.333 17.81 0.00 40.42 1.94
371 372 4.602006 TGCGATCGTGAAAAATCACAAAA 58.398 34.783 17.81 0.00 40.42 2.44
372 373 4.216366 TGCGATCGTGAAAAATCACAAA 57.784 36.364 17.81 0.00 40.42 2.83
373 374 3.887339 TGCGATCGTGAAAAATCACAA 57.113 38.095 17.81 0.00 40.42 3.33
374 375 4.083590 TGAATGCGATCGTGAAAAATCACA 60.084 37.500 17.81 1.97 40.42 3.58
375 376 4.402583 TGAATGCGATCGTGAAAAATCAC 58.597 39.130 17.81 0.00 37.27 3.06
376 377 4.676849 TGAATGCGATCGTGAAAAATCA 57.323 36.364 17.81 8.98 0.00 2.57
377 378 5.497597 GCTTTGAATGCGATCGTGAAAAATC 60.498 40.000 17.81 6.61 0.00 2.17
378 379 4.324402 GCTTTGAATGCGATCGTGAAAAAT 59.676 37.500 17.81 0.00 0.00 1.82
379 380 3.668191 GCTTTGAATGCGATCGTGAAAAA 59.332 39.130 17.81 10.24 0.00 1.94
380 381 3.233578 GCTTTGAATGCGATCGTGAAAA 58.766 40.909 17.81 9.60 0.00 2.29
381 382 2.850321 GCTTTGAATGCGATCGTGAAA 58.150 42.857 17.81 2.89 0.00 2.69
382 383 2.525750 GCTTTGAATGCGATCGTGAA 57.474 45.000 17.81 3.25 0.00 3.18
427 428 1.222936 CATCTCACAGGGGTGCTCC 59.777 63.158 0.00 0.00 44.87 4.70
428 429 1.222936 CCATCTCACAGGGGTGCTC 59.777 63.158 0.00 0.00 44.87 4.26
429 430 1.229625 TCCATCTCACAGGGGTGCT 60.230 57.895 0.00 0.00 44.87 4.40
430 431 1.222936 CTCCATCTCACAGGGGTGC 59.777 63.158 0.00 0.00 44.87 5.01
431 432 1.222936 GCTCCATCTCACAGGGGTG 59.777 63.158 0.00 0.00 46.66 4.61
432 433 1.229625 TGCTCCATCTCACAGGGGT 60.230 57.895 0.00 0.00 0.00 4.95
433 434 1.222936 GTGCTCCATCTCACAGGGG 59.777 63.158 0.00 0.00 33.63 4.79
434 435 1.153489 CGTGCTCCATCTCACAGGG 60.153 63.158 0.00 0.00 33.03 4.45
435 436 0.817654 TACGTGCTCCATCTCACAGG 59.182 55.000 0.00 0.00 33.03 4.00
436 437 2.360483 AGATACGTGCTCCATCTCACAG 59.640 50.000 0.00 0.00 33.03 3.66
437 438 2.099756 CAGATACGTGCTCCATCTCACA 59.900 50.000 0.00 0.00 33.03 3.58
438 439 2.736978 CAGATACGTGCTCCATCTCAC 58.263 52.381 0.00 0.00 0.00 3.51
439 440 1.067669 GCAGATACGTGCTCCATCTCA 59.932 52.381 0.00 0.00 40.54 3.27
440 441 1.604185 GGCAGATACGTGCTCCATCTC 60.604 57.143 0.00 0.00 43.45 2.75
441 442 0.390860 GGCAGATACGTGCTCCATCT 59.609 55.000 0.00 0.00 43.45 2.90
442 443 0.941463 CGGCAGATACGTGCTCCATC 60.941 60.000 0.00 0.00 43.45 3.51
443 444 1.068083 CGGCAGATACGTGCTCCAT 59.932 57.895 0.00 0.00 43.45 3.41
444 445 2.494445 CGGCAGATACGTGCTCCA 59.506 61.111 0.00 0.00 43.45 3.86
445 446 2.962253 GCGGCAGATACGTGCTCC 60.962 66.667 0.00 0.00 43.45 4.70
446 447 2.202743 TGCGGCAGATACGTGCTC 60.203 61.111 0.00 0.00 43.45 4.26
447 448 2.202797 CTGCGGCAGATACGTGCT 60.203 61.111 25.33 0.00 43.45 4.40
448 449 1.154205 ATTCTGCGGCAGATACGTGC 61.154 55.000 31.20 0.00 40.39 5.34
449 450 0.578683 CATTCTGCGGCAGATACGTG 59.421 55.000 31.20 22.04 40.39 4.49
450 451 1.154205 GCATTCTGCGGCAGATACGT 61.154 55.000 31.20 15.82 40.39 3.57
451 452 1.566563 GCATTCTGCGGCAGATACG 59.433 57.895 31.20 22.27 40.39 3.06
461 462 0.815213 TCCTATGTGCCGCATTCTGC 60.815 55.000 0.00 0.00 40.69 4.26
462 463 0.940126 GTCCTATGTGCCGCATTCTG 59.060 55.000 0.00 0.00 38.94 3.02
463 464 0.179045 GGTCCTATGTGCCGCATTCT 60.179 55.000 0.00 0.00 38.94 2.40
464 465 0.179045 AGGTCCTATGTGCCGCATTC 60.179 55.000 0.00 0.00 38.94 2.67
465 466 0.179045 GAGGTCCTATGTGCCGCATT 60.179 55.000 0.00 0.00 38.94 3.56
466 467 1.050988 AGAGGTCCTATGTGCCGCAT 61.051 55.000 0.00 0.00 41.42 4.73
467 468 1.676678 GAGAGGTCCTATGTGCCGCA 61.677 60.000 0.00 0.00 0.00 5.69
468 469 1.068250 GAGAGGTCCTATGTGCCGC 59.932 63.158 0.00 0.00 0.00 6.53
469 470 1.043116 TGGAGAGGTCCTATGTGCCG 61.043 60.000 0.00 0.00 44.30 5.69
470 471 1.204146 TTGGAGAGGTCCTATGTGCC 58.796 55.000 0.00 0.00 44.30 5.01
471 472 3.350219 TTTTGGAGAGGTCCTATGTGC 57.650 47.619 0.00 0.00 44.30 4.57
472 473 6.763610 GTCTAATTTTGGAGAGGTCCTATGTG 59.236 42.308 0.00 0.00 44.30 3.21
473 474 6.443849 TGTCTAATTTTGGAGAGGTCCTATGT 59.556 38.462 0.00 0.00 44.30 2.29
474 475 6.889198 TGTCTAATTTTGGAGAGGTCCTATG 58.111 40.000 0.00 0.00 44.30 2.23
475 476 6.100424 CCTGTCTAATTTTGGAGAGGTCCTAT 59.900 42.308 10.57 0.00 42.09 2.57
476 477 5.425539 CCTGTCTAATTTTGGAGAGGTCCTA 59.574 44.000 10.57 0.00 42.09 2.94
477 478 4.226168 CCTGTCTAATTTTGGAGAGGTCCT 59.774 45.833 10.57 0.00 42.09 3.85
478 479 4.518249 CCTGTCTAATTTTGGAGAGGTCC 58.482 47.826 10.57 0.00 42.09 4.46
479 480 3.942115 GCCTGTCTAATTTTGGAGAGGTC 59.058 47.826 17.38 9.04 46.60 3.85
480 481 3.589288 AGCCTGTCTAATTTTGGAGAGGT 59.411 43.478 17.38 5.77 46.60 3.85
482 483 4.836825 TCAGCCTGTCTAATTTTGGAGAG 58.163 43.478 0.00 0.00 0.00 3.20
483 484 4.908601 TCAGCCTGTCTAATTTTGGAGA 57.091 40.909 0.00 0.00 0.00 3.71
484 485 4.337555 CCATCAGCCTGTCTAATTTTGGAG 59.662 45.833 0.00 0.00 0.00 3.86
485 486 4.272489 CCATCAGCCTGTCTAATTTTGGA 58.728 43.478 0.00 0.00 0.00 3.53
486 487 3.382546 CCCATCAGCCTGTCTAATTTTGG 59.617 47.826 0.00 0.00 0.00 3.28
487 488 3.181483 GCCCATCAGCCTGTCTAATTTTG 60.181 47.826 0.00 0.00 0.00 2.44
488 489 3.026694 GCCCATCAGCCTGTCTAATTTT 58.973 45.455 0.00 0.00 0.00 1.82
489 490 2.243221 AGCCCATCAGCCTGTCTAATTT 59.757 45.455 0.00 0.00 0.00 1.82
490 491 1.849039 AGCCCATCAGCCTGTCTAATT 59.151 47.619 0.00 0.00 0.00 1.40
491 492 1.516110 AGCCCATCAGCCTGTCTAAT 58.484 50.000 0.00 0.00 0.00 1.73
492 493 2.174685 TAGCCCATCAGCCTGTCTAA 57.825 50.000 0.00 0.00 0.00 2.10
493 494 2.170607 GTTTAGCCCATCAGCCTGTCTA 59.829 50.000 0.00 0.00 0.00 2.59
494 495 1.065126 GTTTAGCCCATCAGCCTGTCT 60.065 52.381 0.00 0.00 0.00 3.41
495 496 1.383523 GTTTAGCCCATCAGCCTGTC 58.616 55.000 0.00 0.00 0.00 3.51
496 497 0.392998 CGTTTAGCCCATCAGCCTGT 60.393 55.000 0.00 0.00 0.00 4.00
497 498 0.392998 ACGTTTAGCCCATCAGCCTG 60.393 55.000 0.00 0.00 0.00 4.85
498 499 0.392998 CACGTTTAGCCCATCAGCCT 60.393 55.000 0.00 0.00 0.00 4.58
499 500 1.993369 GCACGTTTAGCCCATCAGCC 61.993 60.000 0.00 0.00 0.00 4.85
500 501 1.026718 AGCACGTTTAGCCCATCAGC 61.027 55.000 0.00 0.00 0.00 4.26
501 502 0.729116 CAGCACGTTTAGCCCATCAG 59.271 55.000 0.00 0.00 0.00 2.90
502 503 0.323302 TCAGCACGTTTAGCCCATCA 59.677 50.000 0.00 0.00 0.00 3.07
503 504 1.331756 CATCAGCACGTTTAGCCCATC 59.668 52.381 0.00 0.00 0.00 3.51
504 505 1.340017 ACATCAGCACGTTTAGCCCAT 60.340 47.619 0.00 0.00 0.00 4.00
505 506 0.036164 ACATCAGCACGTTTAGCCCA 59.964 50.000 0.00 0.00 0.00 5.36
506 507 0.447801 CACATCAGCACGTTTAGCCC 59.552 55.000 0.00 0.00 0.00 5.19
507 508 0.179189 GCACATCAGCACGTTTAGCC 60.179 55.000 0.00 0.00 0.00 3.93
508 509 0.179189 GGCACATCAGCACGTTTAGC 60.179 55.000 0.00 0.00 35.83 3.09
509 510 0.095245 CGGCACATCAGCACGTTTAG 59.905 55.000 0.00 0.00 35.83 1.85
510 511 1.295357 CCGGCACATCAGCACGTTTA 61.295 55.000 0.00 0.00 35.83 2.01
511 512 2.616330 CCGGCACATCAGCACGTTT 61.616 57.895 0.00 0.00 35.83 3.60
512 513 3.049674 CCGGCACATCAGCACGTT 61.050 61.111 0.00 0.00 35.83 3.99
519 520 4.652131 AAACGGGCCGGCACATCA 62.652 61.111 31.47 0.00 0.00 3.07
520 521 3.810896 GAAACGGGCCGGCACATC 61.811 66.667 31.47 19.73 0.00 3.06
526 527 2.596338 AACAAGGAAACGGGCCGG 60.596 61.111 31.78 12.91 0.00 6.13
527 528 2.642700 CAACAAGGAAACGGGCCG 59.357 61.111 27.06 27.06 0.00 6.13
528 529 2.338620 GCAACAAGGAAACGGGCC 59.661 61.111 0.00 0.00 0.00 5.80
529 530 2.050442 CGCAACAAGGAAACGGGC 60.050 61.111 0.00 0.00 0.00 6.13
530 531 2.050442 GCGCAACAAGGAAACGGG 60.050 61.111 0.30 0.00 0.00 5.28
531 532 2.050442 GGCGCAACAAGGAAACGG 60.050 61.111 10.83 0.00 0.00 4.44
532 533 1.003262 CATGGCGCAACAAGGAAACG 61.003 55.000 10.83 0.00 0.00 3.60
533 534 1.284297 GCATGGCGCAACAAGGAAAC 61.284 55.000 10.83 0.00 41.79 2.78
534 535 1.006337 GCATGGCGCAACAAGGAAA 60.006 52.632 10.83 0.00 41.79 3.13
535 536 2.650196 GCATGGCGCAACAAGGAA 59.350 55.556 10.83 0.00 41.79 3.36
536 537 3.372730 GGCATGGCGCAACAAGGA 61.373 61.111 10.83 0.00 45.17 3.36
537 538 3.376078 AGGCATGGCGCAACAAGG 61.376 61.111 14.30 0.00 45.17 3.61
538 539 2.126228 CAGGCATGGCGCAACAAG 60.126 61.111 14.30 0.00 45.17 3.16
539 540 3.682885 CCAGGCATGGCGCAACAA 61.683 61.111 14.30 0.00 45.17 2.83
548 549 2.120909 CCTAAACGGGCCAGGCATG 61.121 63.158 15.19 7.24 0.00 4.06
549 550 2.275418 CCTAAACGGGCCAGGCAT 59.725 61.111 15.19 0.00 0.00 4.40
593 594 0.312102 GGCAAAGCACTTCACAGACC 59.688 55.000 0.00 0.00 0.00 3.85
597 598 0.179059 TCGAGGCAAAGCACTTCACA 60.179 50.000 0.00 0.00 0.00 3.58
625 626 2.736670 AAAAGCACTTCACAGACCCT 57.263 45.000 0.00 0.00 0.00 4.34
645 646 3.991773 GCGTGAACAGTATAGTCCACAAA 59.008 43.478 0.00 0.00 0.00 2.83
646 647 3.581755 GCGTGAACAGTATAGTCCACAA 58.418 45.455 0.00 0.00 0.00 3.33
647 648 2.414957 CGCGTGAACAGTATAGTCCACA 60.415 50.000 0.00 0.00 0.00 4.17
1226 1229 1.308998 CCGCTTCAACCAAGAACTGT 58.691 50.000 0.00 0.00 33.29 3.55
1728 1731 7.772332 AACTGTCTCAACTTTGTACTAACTG 57.228 36.000 0.00 0.00 0.00 3.16
1750 1753 7.746703 ACATACTCCCTCTATCCCAAAATAAC 58.253 38.462 0.00 0.00 0.00 1.89
1762 1765 7.363031 AGACCTGATAAAACATACTCCCTCTA 58.637 38.462 0.00 0.00 0.00 2.43
1822 1825 8.071177 ACTATCTGCAAATCAATTAAAAGCCT 57.929 30.769 0.00 0.00 0.00 4.58
1893 1896 7.933033 ACTACATTTGCCTTTTCAATCATTTGT 59.067 29.630 0.00 0.00 34.32 2.83
2247 2250 6.039270 ACAACTCAACAAGCAATAGCAGTTTA 59.961 34.615 0.00 0.00 45.49 2.01
2518 2521 3.434167 GCACCCTACTCATCCAATCACAT 60.434 47.826 0.00 0.00 0.00 3.21
2571 2574 5.525378 CCTATTTCTCCCTCTTGATTGAACG 59.475 44.000 0.00 0.00 0.00 3.95
2619 2622 3.815401 GCTTACATCACACAGAACAGGTT 59.185 43.478 0.00 0.00 0.00 3.50
2647 2650 4.764823 TGACCACATCTTTATTGGTTGTCC 59.235 41.667 0.00 0.00 43.94 4.02
2824 2827 0.107643 TCGCCATGTCTGTGTTTCCA 59.892 50.000 0.00 0.00 0.00 3.53
2828 2831 3.052455 TGTTATCGCCATGTCTGTGTT 57.948 42.857 0.00 0.00 0.00 3.32
2838 2841 1.001520 CCGTATCCCATGTTATCGCCA 59.998 52.381 0.00 0.00 0.00 5.69
2890 2893 3.512724 GGGCTGCCCTTTATATACTCGTA 59.487 47.826 30.42 0.00 41.34 3.43
2905 2908 3.643595 TACATGCACTGGGGCTGCC 62.644 63.158 11.05 11.05 33.36 4.85
2907 2910 2.117156 GCTACATGCACTGGGGCTG 61.117 63.158 0.00 0.00 42.31 4.85
2911 5852 1.153086 GGGAGCTACATGCACTGGG 60.153 63.158 0.00 0.00 45.94 4.45
2934 5875 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
2935 5876 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
2936 5877 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
2937 5878 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
2938 5879 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
2940 5881 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
2942 5883 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
2943 5884 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
2944 5885 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
2945 5886 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
2946 5887 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
2947 5888 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
2949 5890 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
2950 5891 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
2951 5892 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
2952 5893 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
2958 5899 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
2959 5900 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
2961 5902 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
2962 5903 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
2963 5904 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
2964 5905 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
2966 5907 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
2968 5909 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
2969 5910 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
2971 5912 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
2973 5914 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
2975 5916 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
2977 5918 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
2978 5919 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
2979 5920 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
2980 5921 2.424956 GCAGAAATGTAGGGAAAGGCTG 59.575 50.000 0.00 0.00 0.00 4.85
2981 5922 2.041620 TGCAGAAATGTAGGGAAAGGCT 59.958 45.455 0.00 0.00 0.00 4.58
2983 5924 4.335416 TCTTGCAGAAATGTAGGGAAAGG 58.665 43.478 0.00 0.00 0.00 3.11
2984 5925 4.397417 CCTCTTGCAGAAATGTAGGGAAAG 59.603 45.833 0.00 0.00 0.00 2.62
2985 5926 4.335416 CCTCTTGCAGAAATGTAGGGAAA 58.665 43.478 0.00 0.00 0.00 3.13
2986 5927 3.873801 GCCTCTTGCAGAAATGTAGGGAA 60.874 47.826 0.00 0.00 40.77 3.97
2987 5928 2.356125 GCCTCTTGCAGAAATGTAGGGA 60.356 50.000 0.00 0.00 40.77 4.20
2988 5929 2.019984 GCCTCTTGCAGAAATGTAGGG 58.980 52.381 0.00 0.00 40.77 3.53
2989 5930 2.681848 CAGCCTCTTGCAGAAATGTAGG 59.318 50.000 0.00 0.00 44.83 3.18
2990 5931 3.341823 ACAGCCTCTTGCAGAAATGTAG 58.658 45.455 0.00 0.00 44.83 2.74
2991 5932 3.423539 ACAGCCTCTTGCAGAAATGTA 57.576 42.857 0.00 0.00 44.83 2.29
2992 5933 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
2993 5934 4.456911 TCTTTACAGCCTCTTGCAGAAATG 59.543 41.667 0.00 0.00 44.83 2.32
2994 5935 4.655963 TCTTTACAGCCTCTTGCAGAAAT 58.344 39.130 0.00 0.00 44.83 2.17
2996 5937 3.769739 TCTTTACAGCCTCTTGCAGAA 57.230 42.857 0.00 0.00 44.83 3.02
2997 5938 3.769739 TTCTTTACAGCCTCTTGCAGA 57.230 42.857 0.00 0.00 44.83 4.26
2998 5939 4.836125 TTTTCTTTACAGCCTCTTGCAG 57.164 40.909 0.00 0.00 44.83 4.41
2999 5940 8.046708 TCTATATTTTCTTTACAGCCTCTTGCA 58.953 33.333 0.00 0.00 44.83 4.08
3001 5942 9.606631 ACTCTATATTTTCTTTACAGCCTCTTG 57.393 33.333 0.00 0.00 0.00 3.02
3339 6474 0.245539 GCCATGTCATTGCTGCTTGT 59.754 50.000 0.00 0.00 0.00 3.16
3475 6618 3.060615 CCAAGCACAGCAGCCTCC 61.061 66.667 0.00 0.00 34.23 4.30
3541 6684 2.178521 CTCTAGTGAACGCGCCGT 59.821 61.111 5.73 0.00 43.97 5.68
3552 6695 1.001503 AGCTGCTCCTGGCTCTAGT 59.998 57.895 0.00 0.00 42.39 2.57
3692 6846 7.065803 CCACAGTACCATCTCATTTACGAATTT 59.934 37.037 0.00 0.00 0.00 1.82
3751 6906 0.613260 ATTTGCTGTCCTAGTGCGGA 59.387 50.000 0.00 0.00 0.00 5.54
3818 6974 2.760092 GCATACCATCAACACCAACCAT 59.240 45.455 0.00 0.00 0.00 3.55
4425 7586 6.956202 AGAAATCCTCCTGCAGAAATATTG 57.044 37.500 17.39 0.00 0.00 1.90
4615 7776 8.741101 TTTGAGAACATGCACAAATATTACAC 57.259 30.769 0.00 0.00 0.00 2.90
4677 7838 1.679680 GGTGCATTGCATACTCAGCAT 59.320 47.619 15.49 0.00 41.91 3.79
4678 7839 1.097232 GGTGCATTGCATACTCAGCA 58.903 50.000 15.49 0.00 41.91 4.41
4679 7840 1.065102 CAGGTGCATTGCATACTCAGC 59.935 52.381 15.49 0.00 41.91 4.26
4680 7841 2.612672 CTCAGGTGCATTGCATACTCAG 59.387 50.000 15.49 8.56 41.91 3.35
4681 7842 2.635714 CTCAGGTGCATTGCATACTCA 58.364 47.619 15.49 2.21 41.91 3.41
4682 7843 1.945394 CCTCAGGTGCATTGCATACTC 59.055 52.381 15.49 1.28 41.91 2.59
4683 7844 1.283029 ACCTCAGGTGCATTGCATACT 59.717 47.619 15.49 13.20 41.91 2.12
4684 7845 1.755179 ACCTCAGGTGCATTGCATAC 58.245 50.000 15.49 11.08 41.91 2.39
4685 7846 3.862877 ATACCTCAGGTGCATTGCATA 57.137 42.857 15.49 1.37 41.91 3.14
4686 7847 2.691526 CAATACCTCAGGTGCATTGCAT 59.308 45.455 15.49 0.00 41.91 3.96
4687 7848 2.093890 CAATACCTCAGGTGCATTGCA 58.906 47.619 6.61 7.38 36.19 4.08
4688 7849 1.202336 GCAATACCTCAGGTGCATTGC 60.202 52.381 22.93 22.93 44.72 3.56
4689 7850 2.372264 AGCAATACCTCAGGTGCATTG 58.628 47.619 6.61 10.82 35.75 2.82
4690 7851 2.814805 AGCAATACCTCAGGTGCATT 57.185 45.000 6.61 0.00 36.19 3.56
4840 8015 7.386025 TGAAGCAGACATTATAAATCTCCATCG 59.614 37.037 0.69 0.00 0.00 3.84
5293 8468 4.103153 ACAGACCCTTCAGAGATGTTGAAA 59.897 41.667 0.00 0.00 34.41 2.69
5294 8469 3.648067 ACAGACCCTTCAGAGATGTTGAA 59.352 43.478 0.00 0.00 33.76 2.69
5295 8470 3.007290 CACAGACCCTTCAGAGATGTTGA 59.993 47.826 0.00 0.00 0.00 3.18
5296 8471 3.332919 CACAGACCCTTCAGAGATGTTG 58.667 50.000 0.00 0.00 0.00 3.33
5297 8472 2.289945 GCACAGACCCTTCAGAGATGTT 60.290 50.000 0.00 0.00 0.00 2.71
5298 8473 1.277557 GCACAGACCCTTCAGAGATGT 59.722 52.381 0.00 0.00 0.00 3.06
5299 8474 1.554160 AGCACAGACCCTTCAGAGATG 59.446 52.381 0.00 0.00 0.00 2.90
5300 8475 1.949799 AGCACAGACCCTTCAGAGAT 58.050 50.000 0.00 0.00 0.00 2.75
5301 8476 1.722034 AAGCACAGACCCTTCAGAGA 58.278 50.000 0.00 0.00 0.00 3.10
5302 8477 2.149578 CAAAGCACAGACCCTTCAGAG 58.850 52.381 0.00 0.00 0.00 3.35
5303 8478 1.490490 ACAAAGCACAGACCCTTCAGA 59.510 47.619 0.00 0.00 0.00 3.27
5304 8479 1.605710 CACAAAGCACAGACCCTTCAG 59.394 52.381 0.00 0.00 0.00 3.02
5305 8480 1.679139 CACAAAGCACAGACCCTTCA 58.321 50.000 0.00 0.00 0.00 3.02
5306 8481 0.954452 CCACAAAGCACAGACCCTTC 59.046 55.000 0.00 0.00 0.00 3.46
5307 8482 0.258774 ACCACAAAGCACAGACCCTT 59.741 50.000 0.00 0.00 0.00 3.95
5308 8483 0.466189 CACCACAAAGCACAGACCCT 60.466 55.000 0.00 0.00 0.00 4.34
5309 8484 0.751643 ACACCACAAAGCACAGACCC 60.752 55.000 0.00 0.00 0.00 4.46
5310 8485 1.102978 AACACCACAAAGCACAGACC 58.897 50.000 0.00 0.00 0.00 3.85
5311 8486 1.742831 TCAACACCACAAAGCACAGAC 59.257 47.619 0.00 0.00 0.00 3.51
5312 8487 1.742831 GTCAACACCACAAAGCACAGA 59.257 47.619 0.00 0.00 0.00 3.41
5313 8488 1.531677 CGTCAACACCACAAAGCACAG 60.532 52.381 0.00 0.00 0.00 3.66
5314 8489 0.449786 CGTCAACACCACAAAGCACA 59.550 50.000 0.00 0.00 0.00 4.57
5315 8490 0.730265 TCGTCAACACCACAAAGCAC 59.270 50.000 0.00 0.00 0.00 4.40
5316 8491 1.454201 TTCGTCAACACCACAAAGCA 58.546 45.000 0.00 0.00 0.00 3.91
5317 8492 2.032799 TGATTCGTCAACACCACAAAGC 59.967 45.455 0.00 0.00 0.00 3.51
5318 8493 3.961477 TGATTCGTCAACACCACAAAG 57.039 42.857 0.00 0.00 0.00 2.77
5319 8494 4.022464 GTTGATTCGTCAACACCACAAA 57.978 40.909 14.48 0.00 46.57 2.83
5320 8495 3.684103 GTTGATTCGTCAACACCACAA 57.316 42.857 14.48 0.00 46.57 3.33
5520 8695 2.891191 TGGAATAAACGCCCCTTCTT 57.109 45.000 0.00 0.00 0.00 2.52
6316 9512 4.119442 TCTGCGGTATCTTGGTCTAAAC 57.881 45.455 0.00 0.00 0.00 2.01
6575 9771 2.566746 AGGTCCATTCCAGACTTCCAT 58.433 47.619 0.00 0.00 34.56 3.41
6829 10025 3.107601 TCAGGTGGACTTTCCTCATAGG 58.892 50.000 0.00 0.00 37.46 2.57
6833 10029 4.080356 CCATATTCAGGTGGACTTTCCTCA 60.080 45.833 0.00 0.00 37.46 3.86
7054 10250 3.130340 GCTTTCAGGACCAACAGTTTCAA 59.870 43.478 0.00 0.00 0.00 2.69
7567 10763 5.538433 ACAGCACCTGGTAAACAAAATACAT 59.462 36.000 0.00 0.00 35.51 2.29
7584 10780 1.675720 AACAGGCACCAAACAGCACC 61.676 55.000 0.00 0.00 0.00 5.01
7731 10927 5.655532 CCCTTCTGAGAAAATCCATGTCATT 59.344 40.000 0.00 0.00 0.00 2.57
7732 10928 5.198965 CCCTTCTGAGAAAATCCATGTCAT 58.801 41.667 0.00 0.00 0.00 3.06
7853 11049 2.550606 CGCAGTTTTGGGTAACAGCTTA 59.449 45.455 0.00 0.00 38.09 3.09
8053 11251 3.655276 AGACAAAGCTTCCAGCATTTG 57.345 42.857 0.00 14.10 45.56 2.32
8054 11252 4.401925 AGTAGACAAAGCTTCCAGCATTT 58.598 39.130 0.00 0.00 45.56 2.32
8163 11361 3.559069 ACAGTTGGCAGCATAATAGCAT 58.441 40.909 3.63 0.00 36.85 3.79
8164 11362 3.003394 ACAGTTGGCAGCATAATAGCA 57.997 42.857 3.63 0.00 36.85 3.49
8165 11363 3.378112 TGAACAGTTGGCAGCATAATAGC 59.622 43.478 3.63 0.00 0.00 2.97
8166 11364 5.165911 CTGAACAGTTGGCAGCATAATAG 57.834 43.478 3.63 0.00 0.00 1.73
8174 11372 1.228367 AGGGCTGAACAGTTGGCAG 60.228 57.895 9.29 4.41 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.