Multiple sequence alignment - TraesCS6D01G173500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G173500 chr6D 100.000 1974 0 0 1 1974 162124876 162126849 0.000000e+00 3646.0
1 TraesCS6D01G173500 chr6D 91.003 867 68 5 895 1751 454800726 454799860 0.000000e+00 1160.0
2 TraesCS6D01G173500 chr6D 89.085 852 76 12 892 1732 454686208 454687053 0.000000e+00 1042.0
3 TraesCS6D01G173500 chr6D 100.000 486 0 0 2247 2732 162127122 162127607 0.000000e+00 898.0
4 TraesCS6D01G173500 chr6D 91.667 60 3 2 32 90 146590765 146590707 6.270000e-12 82.4
5 TraesCS6D01G173500 chr6D 92.857 56 2 2 37 90 130686324 130686269 2.260000e-11 80.5
6 TraesCS6D01G173500 chr6B 93.207 1899 103 15 87 1974 300243404 300241521 0.000000e+00 2769.0
7 TraesCS6D01G173500 chr6B 89.708 855 71 9 895 1732 691749641 691748787 0.000000e+00 1075.0
8 TraesCS6D01G173500 chr6A 96.107 1387 40 8 594 1974 221553746 221555124 0.000000e+00 2250.0
9 TraesCS6D01G173500 chr6A 89.357 855 78 5 895 1736 601134356 601133502 0.000000e+00 1062.0
10 TraesCS6D01G173500 chr6A 90.260 770 64 6 989 1748 601006054 601005286 0.000000e+00 996.0
11 TraesCS6D01G173500 chr6A 86.492 459 52 7 87 540 221553284 221553737 1.890000e-136 496.0
12 TraesCS6D01G173500 chr6A 78.070 456 96 4 2279 2732 597494196 597493743 4.450000e-73 285.0
13 TraesCS6D01G173500 chr6A 90.411 73 6 1 896 967 601006180 601006108 8.050000e-16 95.3
14 TraesCS6D01G173500 chr5B 77.645 671 118 25 1037 1688 494026885 494026228 1.990000e-101 379.0
15 TraesCS6D01G173500 chr5D 84.054 370 51 7 1037 1404 411743095 411742732 1.560000e-92 350.0
16 TraesCS6D01G173500 chr5D 81.114 413 76 2 2276 2687 448661994 448662405 2.030000e-86 329.0
17 TraesCS6D01G173500 chr5D 92.135 89 6 1 1 89 195034283 195034370 1.030000e-24 124.0
18 TraesCS6D01G173500 chr2D 81.227 277 49 1 2439 2715 352174913 352174640 1.270000e-53 220.0
19 TraesCS6D01G173500 chr2D 89.394 66 3 3 31 94 329639045 329638982 2.260000e-11 80.5
20 TraesCS6D01G173500 chr4B 94.828 58 1 2 34 91 360984182 360984127 3.750000e-14 89.8
21 TraesCS6D01G173500 chr3D 86.076 79 7 4 32 106 322281104 322281182 6.270000e-12 82.4
22 TraesCS6D01G173500 chr2B 92.857 56 4 0 34 89 318810070 318810125 6.270000e-12 82.4
23 TraesCS6D01G173500 chr4A 91.667 60 1 3 32 90 202140803 202140747 2.260000e-11 80.5
24 TraesCS6D01G173500 chr4D 94.231 52 2 1 45 95 389894222 389894171 8.110000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G173500 chr6D 162124876 162127607 2731 False 2272.00 3646 100.0000 1 2732 2 chr6D.!!$F2 2731
1 TraesCS6D01G173500 chr6D 454799860 454800726 866 True 1160.00 1160 91.0030 895 1751 1 chr6D.!!$R3 856
2 TraesCS6D01G173500 chr6D 454686208 454687053 845 False 1042.00 1042 89.0850 892 1732 1 chr6D.!!$F1 840
3 TraesCS6D01G173500 chr6B 300241521 300243404 1883 True 2769.00 2769 93.2070 87 1974 1 chr6B.!!$R1 1887
4 TraesCS6D01G173500 chr6B 691748787 691749641 854 True 1075.00 1075 89.7080 895 1732 1 chr6B.!!$R2 837
5 TraesCS6D01G173500 chr6A 221553284 221555124 1840 False 1373.00 2250 91.2995 87 1974 2 chr6A.!!$F1 1887
6 TraesCS6D01G173500 chr6A 601133502 601134356 854 True 1062.00 1062 89.3570 895 1736 1 chr6A.!!$R2 841
7 TraesCS6D01G173500 chr6A 601005286 601006180 894 True 545.65 996 90.3355 896 1748 2 chr6A.!!$R3 852
8 TraesCS6D01G173500 chr5B 494026228 494026885 657 True 379.00 379 77.6450 1037 1688 1 chr5B.!!$R1 651

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.396974 TTGCAGTGGAGTTTTGCCCT 60.397 50.0 0.0 0.0 37.03 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1948 2026 0.108138 CGTGTCATTGTCTCCCTCCC 60.108 60.0 0.0 0.0 0.0 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.556030 GTATTTTAAGACTGTGGACTATTTTGC 57.444 33.333 0.00 0.00 0.00 3.68
28 29 7.817418 TTTTAAGACTGTGGACTATTTTGCT 57.183 32.000 0.00 0.00 0.00 3.91
29 30 7.435068 TTTAAGACTGTGGACTATTTTGCTC 57.565 36.000 0.00 0.00 0.00 4.26
30 31 3.944087 AGACTGTGGACTATTTTGCTCC 58.056 45.455 0.00 0.00 0.00 4.70
31 32 3.584848 AGACTGTGGACTATTTTGCTCCT 59.415 43.478 0.00 0.00 0.00 3.69
32 33 4.042187 AGACTGTGGACTATTTTGCTCCTT 59.958 41.667 0.00 0.00 0.00 3.36
33 34 4.729868 ACTGTGGACTATTTTGCTCCTTT 58.270 39.130 0.00 0.00 0.00 3.11
34 35 5.876357 ACTGTGGACTATTTTGCTCCTTTA 58.124 37.500 0.00 0.00 0.00 1.85
35 36 6.303839 ACTGTGGACTATTTTGCTCCTTTAA 58.696 36.000 0.00 0.00 0.00 1.52
36 37 6.948309 ACTGTGGACTATTTTGCTCCTTTAAT 59.052 34.615 0.00 0.00 0.00 1.40
37 38 8.107095 ACTGTGGACTATTTTGCTCCTTTAATA 58.893 33.333 0.00 0.00 0.00 0.98
38 39 8.871629 TGTGGACTATTTTGCTCCTTTAATAA 57.128 30.769 0.00 0.00 0.00 1.40
39 40 9.303116 TGTGGACTATTTTGCTCCTTTAATAAA 57.697 29.630 0.00 0.00 0.00 1.40
66 67 4.880886 AAAAATTGCAGTGGAGTTTTGC 57.119 36.364 16.56 0.00 38.30 3.68
67 68 2.531522 AATTGCAGTGGAGTTTTGCC 57.468 45.000 0.00 0.00 37.03 4.52
68 69 0.681175 ATTGCAGTGGAGTTTTGCCC 59.319 50.000 0.00 0.00 37.03 5.36
69 70 0.396974 TTGCAGTGGAGTTTTGCCCT 60.397 50.000 0.00 0.00 37.03 5.19
70 71 0.476338 TGCAGTGGAGTTTTGCCCTA 59.524 50.000 0.00 0.00 37.03 3.53
71 72 0.881796 GCAGTGGAGTTTTGCCCTAC 59.118 55.000 0.00 0.00 31.79 3.18
72 73 1.545651 GCAGTGGAGTTTTGCCCTACT 60.546 52.381 0.00 0.00 31.79 2.57
73 74 2.154462 CAGTGGAGTTTTGCCCTACTG 58.846 52.381 0.00 0.00 0.00 2.74
74 75 1.774856 AGTGGAGTTTTGCCCTACTGT 59.225 47.619 0.00 0.00 0.00 3.55
75 76 1.880027 GTGGAGTTTTGCCCTACTGTG 59.120 52.381 0.00 0.00 0.00 3.66
76 77 1.493022 TGGAGTTTTGCCCTACTGTGT 59.507 47.619 0.00 0.00 0.00 3.72
77 78 2.706723 TGGAGTTTTGCCCTACTGTGTA 59.293 45.455 0.00 0.00 0.00 2.90
78 79 3.329520 TGGAGTTTTGCCCTACTGTGTAT 59.670 43.478 0.00 0.00 0.00 2.29
79 80 4.532916 TGGAGTTTTGCCCTACTGTGTATA 59.467 41.667 0.00 0.00 0.00 1.47
80 81 5.116882 GGAGTTTTGCCCTACTGTGTATAG 58.883 45.833 0.00 0.00 0.00 1.31
81 82 5.338137 GGAGTTTTGCCCTACTGTGTATAGT 60.338 44.000 0.00 0.00 34.71 2.12
82 83 5.731591 AGTTTTGCCCTACTGTGTATAGTC 58.268 41.667 0.00 0.00 32.19 2.59
83 84 5.247564 AGTTTTGCCCTACTGTGTATAGTCA 59.752 40.000 0.00 0.00 32.19 3.41
84 85 5.748670 TTTGCCCTACTGTGTATAGTCAA 57.251 39.130 0.00 0.00 32.19 3.18
85 86 5.748670 TTGCCCTACTGTGTATAGTCAAA 57.251 39.130 0.00 0.00 32.19 2.69
128 129 3.632145 GTCTGGCAAATTACGATGGGAAT 59.368 43.478 0.00 0.00 0.00 3.01
160 161 5.776173 ACTAGTGATTGGACGATTAGGAG 57.224 43.478 0.00 0.00 0.00 3.69
163 164 2.434702 GTGATTGGACGATTAGGAGGGT 59.565 50.000 0.00 0.00 0.00 4.34
170 171 3.029570 GACGATTAGGAGGGTAGTGGTT 58.970 50.000 0.00 0.00 0.00 3.67
171 172 3.029570 ACGATTAGGAGGGTAGTGGTTC 58.970 50.000 0.00 0.00 0.00 3.62
186 187 4.608514 TTCCCCCAGCCCACCAGA 62.609 66.667 0.00 0.00 0.00 3.86
247 249 6.479884 AGCAGAATATCTTTCAGTGGAAGTT 58.520 36.000 11.05 5.56 33.82 2.66
251 253 8.383619 CAGAATATCTTTCAGTGGAAGTTAACG 58.616 37.037 11.05 0.00 33.82 3.18
256 258 7.148355 TCTTTCAGTGGAAGTTAACGTTTTT 57.852 32.000 5.91 0.00 33.82 1.94
263 265 7.586300 CAGTGGAAGTTAACGTTTTTGTCTATG 59.414 37.037 5.91 0.00 0.00 2.23
265 267 5.854866 GGAAGTTAACGTTTTTGTCTATGGC 59.145 40.000 5.91 0.00 0.00 4.40
270 272 1.202031 CGTTTTTGTCTATGGCGAGGC 60.202 52.381 0.00 0.00 0.00 4.70
332 338 7.967908 ACCAGGTTCCACTATCATTAGATAAG 58.032 38.462 0.00 0.00 36.35 1.73
362 368 5.028549 AGATCAGAAAATGTCCATAGCGT 57.971 39.130 0.00 0.00 0.00 5.07
375 381 5.642063 TGTCCATAGCGTAAAGAAAGGAAAG 59.358 40.000 0.00 0.00 0.00 2.62
380 386 9.057089 CCATAGCGTAAAGAAAGGAAAGATAAT 57.943 33.333 0.00 0.00 0.00 1.28
381 387 9.869844 CATAGCGTAAAGAAAGGAAAGATAATG 57.130 33.333 0.00 0.00 0.00 1.90
392 399 5.819991 AGGAAAGATAATGGAAGACAAGCA 58.180 37.500 0.00 0.00 0.00 3.91
395 402 6.375455 GGAAAGATAATGGAAGACAAGCAAGA 59.625 38.462 0.00 0.00 0.00 3.02
398 405 1.160137 ATGGAAGACAAGCAAGACGC 58.840 50.000 0.00 0.00 42.91 5.19
407 414 1.394917 CAAGCAAGACGCCTATGTGAC 59.605 52.381 0.00 0.00 44.04 3.67
428 435 6.373774 GTGACTTTGTCAATCTCAAGATCCAT 59.626 38.462 1.73 0.00 44.49 3.41
477 485 4.816126 AGGGGTACTGCATACTCATAAGA 58.184 43.478 8.00 0.00 35.74 2.10
487 495 9.703892 ACTGCATACTCATAAGAGATTAATGTC 57.296 33.333 4.44 4.44 44.98 3.06
507 515 5.670485 TGTCTGTATGTGTTTGTGAGAGTT 58.330 37.500 0.00 0.00 0.00 3.01
544 552 9.463443 CTGTGTTTCTAAAAGAAAATTACCTGG 57.537 33.333 3.77 0.00 44.84 4.45
605 613 1.671845 GTGGCTTGTTAACCACGTTCA 59.328 47.619 2.48 0.00 46.32 3.18
652 660 7.331687 GGCATTAGAGCAGAAGATTTATCTCTC 59.668 40.741 0.00 0.00 34.07 3.20
761 770 4.344865 GGAAAGCTCCCACGGGCA 62.345 66.667 0.00 0.00 35.42 5.36
830 842 2.668834 GCGAAGAGCTGTTTACTCGTCT 60.669 50.000 0.00 0.00 44.04 4.18
832 844 2.355717 AGAGCTGTTTACTCGTCTGC 57.644 50.000 0.00 0.00 39.23 4.26
833 845 1.067495 AGAGCTGTTTACTCGTCTGCC 60.067 52.381 0.00 0.00 39.23 4.85
834 846 0.969894 AGCTGTTTACTCGTCTGCCT 59.030 50.000 0.00 0.00 0.00 4.75
835 847 1.344763 AGCTGTTTACTCGTCTGCCTT 59.655 47.619 0.00 0.00 0.00 4.35
836 848 1.727335 GCTGTTTACTCGTCTGCCTTC 59.273 52.381 0.00 0.00 0.00 3.46
837 849 1.986378 CTGTTTACTCGTCTGCCTTCG 59.014 52.381 0.00 0.00 0.00 3.79
1490 1562 2.519302 GGTGTGCAGTGTGCCCTT 60.519 61.111 0.00 0.00 44.23 3.95
1792 1870 2.754472 CCGCTTCGATTATGATCCACA 58.246 47.619 0.00 0.00 0.00 4.17
1795 1873 4.240888 CGCTTCGATTATGATCCACATCT 58.759 43.478 0.00 0.00 40.07 2.90
1874 1952 6.384015 TCCTGCATATTTCTTCTCAGGTTCTA 59.616 38.462 6.05 0.00 41.24 2.10
1902 1980 2.092753 TCCTCATTCCTCTCATGGCAAC 60.093 50.000 0.00 0.00 0.00 4.17
1923 2001 4.658071 ACAAGACGTACAAGCAGTTTTTG 58.342 39.130 0.00 0.00 0.00 2.44
1948 2026 4.609018 CCCACCTGCTATCGGCCG 62.609 72.222 22.12 22.12 40.92 6.13
2274 2352 3.639162 TTGCACAAAAGGCAAGACG 57.361 47.368 0.00 0.00 45.57 4.18
2275 2353 0.102120 TTGCACAAAAGGCAAGACGG 59.898 50.000 0.00 0.00 45.57 4.79
2276 2354 1.007387 GCACAAAAGGCAAGACGGG 60.007 57.895 0.00 0.00 0.00 5.28
2277 2355 1.659794 CACAAAAGGCAAGACGGGG 59.340 57.895 0.00 0.00 0.00 5.73
2278 2356 0.821711 CACAAAAGGCAAGACGGGGA 60.822 55.000 0.00 0.00 0.00 4.81
2279 2357 0.537371 ACAAAAGGCAAGACGGGGAG 60.537 55.000 0.00 0.00 0.00 4.30
2280 2358 1.603739 AAAAGGCAAGACGGGGAGC 60.604 57.895 0.00 0.00 0.00 4.70
2281 2359 2.351924 AAAAGGCAAGACGGGGAGCA 62.352 55.000 0.00 0.00 0.00 4.26
2282 2360 2.754664 AAAGGCAAGACGGGGAGCAG 62.755 60.000 0.00 0.00 0.00 4.24
2283 2361 4.021925 GGCAAGACGGGGAGCAGT 62.022 66.667 0.00 0.00 0.00 4.40
2284 2362 2.743928 GCAAGACGGGGAGCAGTG 60.744 66.667 0.00 0.00 0.00 3.66
2285 2363 2.046892 CAAGACGGGGAGCAGTGG 60.047 66.667 0.00 0.00 0.00 4.00
2286 2364 2.526873 AAGACGGGGAGCAGTGGT 60.527 61.111 0.00 0.00 0.00 4.16
2287 2365 2.883828 AAGACGGGGAGCAGTGGTG 61.884 63.158 0.00 0.00 0.00 4.17
2288 2366 3.311110 GACGGGGAGCAGTGGTGA 61.311 66.667 0.00 0.00 0.00 4.02
2289 2367 3.591254 GACGGGGAGCAGTGGTGAC 62.591 68.421 0.00 0.00 0.00 3.67
2290 2368 3.625897 CGGGGAGCAGTGGTGACA 61.626 66.667 0.00 0.00 38.70 3.58
2291 2369 2.348998 GGGGAGCAGTGGTGACAG 59.651 66.667 0.00 0.00 44.46 3.51
2292 2370 2.348998 GGGAGCAGTGGTGACAGG 59.651 66.667 0.00 0.00 44.46 4.00
2293 2371 2.359230 GGAGCAGTGGTGACAGGC 60.359 66.667 0.00 0.00 44.46 4.85
2295 2373 2.429058 AGCAGTGGTGACAGGCTG 59.571 61.111 14.16 14.16 46.86 4.85
2297 2375 2.429058 CAGTGGTGACAGGCTGCT 59.571 61.111 15.89 1.32 44.46 4.24
2298 2376 1.670406 CAGTGGTGACAGGCTGCTC 60.670 63.158 15.89 11.88 44.46 4.26
2299 2377 2.142761 AGTGGTGACAGGCTGCTCA 61.143 57.895 15.89 14.37 44.46 4.26
2300 2378 1.670406 GTGGTGACAGGCTGCTCAG 60.670 63.158 15.89 0.00 44.46 3.35
2301 2379 3.541950 TGGTGACAGGCTGCTCAGC 62.542 63.158 27.27 27.27 45.00 4.26
2310 2388 3.390521 CTGCTCAGCCCGGGTACA 61.391 66.667 24.63 12.27 0.00 2.90
2311 2389 2.925706 TGCTCAGCCCGGGTACAA 60.926 61.111 24.63 4.49 0.00 2.41
2312 2390 2.349755 GCTCAGCCCGGGTACAAA 59.650 61.111 24.63 2.52 0.00 2.83
2313 2391 1.077716 GCTCAGCCCGGGTACAAAT 60.078 57.895 24.63 0.00 0.00 2.32
2314 2392 1.095807 GCTCAGCCCGGGTACAAATC 61.096 60.000 24.63 2.54 0.00 2.17
2315 2393 0.541863 CTCAGCCCGGGTACAAATCT 59.458 55.000 24.63 5.38 0.00 2.40
2316 2394 1.760613 CTCAGCCCGGGTACAAATCTA 59.239 52.381 24.63 0.00 0.00 1.98
2317 2395 2.169769 CTCAGCCCGGGTACAAATCTAA 59.830 50.000 24.63 0.00 0.00 2.10
2318 2396 2.169769 TCAGCCCGGGTACAAATCTAAG 59.830 50.000 24.63 0.00 0.00 2.18
2319 2397 2.169769 CAGCCCGGGTACAAATCTAAGA 59.830 50.000 24.63 0.00 0.00 2.10
2320 2398 3.046374 AGCCCGGGTACAAATCTAAGAT 58.954 45.455 24.63 0.00 0.00 2.40
2321 2399 3.071167 AGCCCGGGTACAAATCTAAGATC 59.929 47.826 24.63 0.00 0.00 2.75
2322 2400 3.806157 GCCCGGGTACAAATCTAAGATCC 60.806 52.174 24.63 0.00 0.00 3.36
2323 2401 3.646637 CCCGGGTACAAATCTAAGATCCT 59.353 47.826 14.18 0.00 0.00 3.24
2324 2402 4.836736 CCCGGGTACAAATCTAAGATCCTA 59.163 45.833 14.18 0.00 0.00 2.94
2325 2403 5.484290 CCCGGGTACAAATCTAAGATCCTAT 59.516 44.000 14.18 0.00 0.00 2.57
2326 2404 6.398918 CCGGGTACAAATCTAAGATCCTATG 58.601 44.000 0.00 0.00 0.00 2.23
2327 2405 5.869888 CGGGTACAAATCTAAGATCCTATGC 59.130 44.000 0.00 0.00 0.00 3.14
2328 2406 6.174049 GGGTACAAATCTAAGATCCTATGCC 58.826 44.000 0.00 0.00 0.00 4.40
2329 2407 6.239887 GGGTACAAATCTAAGATCCTATGCCA 60.240 42.308 0.00 0.00 0.00 4.92
2330 2408 6.876257 GGTACAAATCTAAGATCCTATGCCAG 59.124 42.308 0.00 0.00 0.00 4.85
2331 2409 5.312079 ACAAATCTAAGATCCTATGCCAGC 58.688 41.667 0.00 0.00 0.00 4.85
2332 2410 5.163163 ACAAATCTAAGATCCTATGCCAGCA 60.163 40.000 0.00 0.00 0.00 4.41
2333 2411 5.573380 AATCTAAGATCCTATGCCAGCAA 57.427 39.130 0.00 0.00 0.00 3.91
2334 2412 4.342862 TCTAAGATCCTATGCCAGCAAC 57.657 45.455 0.00 0.00 0.00 4.17
2335 2413 1.959042 AAGATCCTATGCCAGCAACG 58.041 50.000 0.00 0.00 0.00 4.10
2336 2414 1.123077 AGATCCTATGCCAGCAACGA 58.877 50.000 0.00 0.00 0.00 3.85
2337 2415 1.486310 AGATCCTATGCCAGCAACGAA 59.514 47.619 0.00 0.00 0.00 3.85
2338 2416 2.105477 AGATCCTATGCCAGCAACGAAT 59.895 45.455 0.00 0.00 0.00 3.34
2339 2417 2.418368 TCCTATGCCAGCAACGAATT 57.582 45.000 0.00 0.00 0.00 2.17
2340 2418 3.552132 TCCTATGCCAGCAACGAATTA 57.448 42.857 0.00 0.00 0.00 1.40
2341 2419 3.879998 TCCTATGCCAGCAACGAATTAA 58.120 40.909 0.00 0.00 0.00 1.40
2342 2420 3.876914 TCCTATGCCAGCAACGAATTAAG 59.123 43.478 0.00 0.00 0.00 1.85
2343 2421 3.627577 CCTATGCCAGCAACGAATTAAGT 59.372 43.478 0.00 0.00 0.00 2.24
2344 2422 3.764885 ATGCCAGCAACGAATTAAGTC 57.235 42.857 0.00 0.00 0.00 3.01
2345 2423 1.810151 TGCCAGCAACGAATTAAGTCC 59.190 47.619 0.00 0.00 0.00 3.85
2346 2424 1.202031 GCCAGCAACGAATTAAGTCCG 60.202 52.381 0.00 0.00 0.00 4.79
2347 2425 2.073816 CCAGCAACGAATTAAGTCCGT 58.926 47.619 0.00 0.00 38.24 4.69
2348 2426 2.159707 CCAGCAACGAATTAAGTCCGTG 60.160 50.000 0.00 0.00 36.58 4.94
2349 2427 1.463444 AGCAACGAATTAAGTCCGTGC 59.537 47.619 14.39 14.39 36.58 5.34
2350 2428 1.785518 GCAACGAATTAAGTCCGTGCG 60.786 52.381 9.00 0.00 36.58 5.34
2351 2429 0.441145 AACGAATTAAGTCCGTGCGC 59.559 50.000 0.00 0.00 36.58 6.09
2352 2430 1.013755 CGAATTAAGTCCGTGCGCG 60.014 57.895 13.88 13.88 37.95 6.86
2353 2431 1.296649 GAATTAAGTCCGTGCGCGC 60.297 57.895 27.26 27.26 36.67 6.86
2354 2432 1.962092 GAATTAAGTCCGTGCGCGCA 61.962 55.000 33.09 33.09 36.67 6.09
2355 2433 1.366111 AATTAAGTCCGTGCGCGCAT 61.366 50.000 38.62 22.65 36.67 4.73
2356 2434 2.035617 ATTAAGTCCGTGCGCGCATG 62.036 55.000 39.38 39.38 36.67 4.06
2361 2439 4.159295 CCGTGCGCGCATGCTTTA 62.159 61.111 40.56 14.62 39.65 1.85
2362 2440 2.645628 CGTGCGCGCATGCTTTAG 60.646 61.111 37.13 18.36 39.65 1.85
2363 2441 2.946086 GTGCGCGCATGCTTTAGC 60.946 61.111 38.62 18.06 39.65 3.09
2364 2442 4.178214 TGCGCGCATGCTTTAGCC 62.178 61.111 33.09 6.49 41.18 3.93
2365 2443 4.912570 GCGCGCATGCTTTAGCCC 62.913 66.667 29.10 0.00 41.18 5.19
2366 2444 3.507924 CGCGCATGCTTTAGCCCA 61.508 61.111 17.13 0.00 41.18 5.36
2367 2445 2.884367 GCGCATGCTTTAGCCCAA 59.116 55.556 17.13 0.00 41.18 4.12
2368 2446 1.226773 GCGCATGCTTTAGCCCAAG 60.227 57.895 17.13 0.00 41.18 3.61
2369 2447 1.656818 GCGCATGCTTTAGCCCAAGA 61.657 55.000 17.13 0.00 41.18 3.02
2370 2448 0.379669 CGCATGCTTTAGCCCAAGAG 59.620 55.000 17.13 0.00 41.18 2.85
2371 2449 0.101939 GCATGCTTTAGCCCAAGAGC 59.898 55.000 11.37 0.00 41.18 4.09
2372 2450 0.379669 CATGCTTTAGCCCAAGAGCG 59.620 55.000 0.00 0.00 41.18 5.03
2373 2451 0.749454 ATGCTTTAGCCCAAGAGCGG 60.749 55.000 0.00 0.00 41.18 5.52
2380 2458 4.394712 CCCAAGAGCGGGCTTCGT 62.395 66.667 0.00 0.00 40.07 3.85
2381 2459 2.815647 CCAAGAGCGGGCTTCGTC 60.816 66.667 0.00 0.22 41.72 4.20
2382 2460 3.181967 CAAGAGCGGGCTTCGTCG 61.182 66.667 0.00 0.00 41.72 5.12
2388 2466 4.260355 CGGGCTTCGTCGCGGATA 62.260 66.667 6.13 0.00 38.51 2.59
2389 2467 2.354773 GGGCTTCGTCGCGGATAG 60.355 66.667 6.13 0.00 0.00 2.08
2390 2468 2.719979 GGCTTCGTCGCGGATAGA 59.280 61.111 6.13 0.00 0.00 1.98
2391 2469 1.657794 GGCTTCGTCGCGGATAGAC 60.658 63.158 6.13 0.00 35.41 2.59
2398 2476 2.744787 GTCGCGGATAGACGTAAGAA 57.255 50.000 6.13 0.00 43.62 2.52
2399 2477 2.637595 GTCGCGGATAGACGTAAGAAG 58.362 52.381 6.13 0.00 43.62 2.85
2400 2478 1.003116 TCGCGGATAGACGTAAGAAGC 60.003 52.381 6.13 0.00 43.62 3.86
2401 2479 1.768510 GCGGATAGACGTAAGAAGCC 58.231 55.000 0.00 0.00 43.62 4.35
2402 2480 1.925068 GCGGATAGACGTAAGAAGCCG 60.925 57.143 10.20 10.20 44.90 5.52
2403 2481 1.332997 CGGATAGACGTAAGAAGCCGT 59.667 52.381 7.26 0.00 40.28 5.68
2404 2482 2.728922 GGATAGACGTAAGAAGCCGTG 58.271 52.381 0.00 0.00 37.44 4.94
2405 2483 2.543238 GGATAGACGTAAGAAGCCGTGG 60.543 54.545 0.00 0.00 37.44 4.94
2406 2484 0.813184 TAGACGTAAGAAGCCGTGGG 59.187 55.000 0.00 0.00 37.44 4.61
2407 2485 1.447314 GACGTAAGAAGCCGTGGGG 60.447 63.158 0.00 0.00 37.44 4.96
2418 2496 4.530857 CGTGGGGCGGAGGATGAC 62.531 72.222 0.00 0.00 36.85 3.06
2419 2497 3.083997 GTGGGGCGGAGGATGACT 61.084 66.667 0.00 0.00 0.00 3.41
2420 2498 2.764128 TGGGGCGGAGGATGACTC 60.764 66.667 0.00 0.00 45.84 3.36
2429 2507 2.315925 GAGGATGACTCGCCATCAAA 57.684 50.000 12.13 0.00 43.49 2.69
2430 2508 2.843701 GAGGATGACTCGCCATCAAAT 58.156 47.619 12.13 1.38 43.49 2.32
2431 2509 3.995199 GAGGATGACTCGCCATCAAATA 58.005 45.455 12.13 0.00 43.49 1.40
2432 2510 3.733337 AGGATGACTCGCCATCAAATAC 58.267 45.455 12.13 0.00 43.49 1.89
2433 2511 2.476619 GGATGACTCGCCATCAAATACG 59.523 50.000 12.13 0.00 43.49 3.06
2434 2512 1.286501 TGACTCGCCATCAAATACGC 58.713 50.000 0.00 0.00 0.00 4.42
2435 2513 1.286501 GACTCGCCATCAAATACGCA 58.713 50.000 0.00 0.00 0.00 5.24
2436 2514 1.867233 GACTCGCCATCAAATACGCAT 59.133 47.619 0.00 0.00 0.00 4.73
2437 2515 1.867233 ACTCGCCATCAAATACGCATC 59.133 47.619 0.00 0.00 0.00 3.91
2438 2516 0.858583 TCGCCATCAAATACGCATCG 59.141 50.000 0.00 0.00 0.00 3.84
2439 2517 0.110688 CGCCATCAAATACGCATCGG 60.111 55.000 0.00 0.00 0.00 4.18
2440 2518 0.944386 GCCATCAAATACGCATCGGT 59.056 50.000 0.00 0.00 0.00 4.69
2441 2519 1.333619 GCCATCAAATACGCATCGGTT 59.666 47.619 0.00 0.00 0.00 4.44
2442 2520 2.854424 GCCATCAAATACGCATCGGTTG 60.854 50.000 0.00 0.00 0.00 3.77
2443 2521 2.354510 CCATCAAATACGCATCGGTTGT 59.645 45.455 0.00 0.00 0.00 3.32
2444 2522 3.353524 CATCAAATACGCATCGGTTGTG 58.646 45.455 0.00 0.00 41.78 3.33
2445 2523 1.129624 TCAAATACGCATCGGTTGTGC 59.870 47.619 0.00 0.00 39.56 4.57
2446 2524 1.130373 CAAATACGCATCGGTTGTGCT 59.870 47.619 0.00 0.00 40.37 4.40
2447 2525 0.726827 AATACGCATCGGTTGTGCTG 59.273 50.000 0.00 0.00 40.37 4.41
2448 2526 1.705337 ATACGCATCGGTTGTGCTGC 61.705 55.000 0.00 0.00 40.37 5.25
2449 2527 2.779951 TACGCATCGGTTGTGCTGCT 62.780 55.000 0.00 0.00 40.37 4.24
2450 2528 2.956987 GCATCGGTTGTGCTGCTT 59.043 55.556 0.00 0.00 39.45 3.91
2451 2529 1.154150 GCATCGGTTGTGCTGCTTC 60.154 57.895 0.00 0.00 39.45 3.86
2452 2530 1.503542 CATCGGTTGTGCTGCTTCC 59.496 57.895 0.00 0.00 0.00 3.46
2453 2531 1.073025 ATCGGTTGTGCTGCTTCCA 59.927 52.632 0.00 0.00 0.00 3.53
2454 2532 0.957395 ATCGGTTGTGCTGCTTCCAG 60.957 55.000 0.00 0.00 42.13 3.86
2455 2533 1.597854 CGGTTGTGCTGCTTCCAGA 60.598 57.895 0.00 0.00 41.77 3.86
2456 2534 0.957395 CGGTTGTGCTGCTTCCAGAT 60.957 55.000 0.00 0.00 41.77 2.90
2457 2535 0.524862 GGTTGTGCTGCTTCCAGATG 59.475 55.000 0.00 0.00 41.77 2.90
2458 2536 0.524862 GTTGTGCTGCTTCCAGATGG 59.475 55.000 0.00 0.00 41.77 3.51
2459 2537 0.401356 TTGTGCTGCTTCCAGATGGA 59.599 50.000 0.00 0.00 41.77 3.41
2460 2538 0.321919 TGTGCTGCTTCCAGATGGAC 60.322 55.000 0.00 0.00 45.39 4.02
2461 2539 1.028868 GTGCTGCTTCCAGATGGACC 61.029 60.000 0.00 0.00 45.39 4.46
2462 2540 1.300963 GCTGCTTCCAGATGGACCA 59.699 57.895 0.00 0.00 45.39 4.02
2463 2541 0.747283 GCTGCTTCCAGATGGACCAG 60.747 60.000 18.05 18.05 45.39 4.00
2464 2542 0.107312 CTGCTTCCAGATGGACCAGG 60.107 60.000 15.92 0.00 45.39 4.45
2465 2543 1.452833 GCTTCCAGATGGACCAGGC 60.453 63.158 0.00 0.81 45.39 4.85
2466 2544 1.225704 CTTCCAGATGGACCAGGCC 59.774 63.158 0.00 0.00 45.39 5.19
2467 2545 2.599645 CTTCCAGATGGACCAGGCCG 62.600 65.000 0.00 0.00 45.39 6.13
2468 2546 3.402681 CCAGATGGACCAGGCCGT 61.403 66.667 0.00 0.00 37.39 5.68
2469 2547 2.671070 CAGATGGACCAGGCCGTT 59.329 61.111 0.00 0.00 0.00 4.44
2470 2548 1.622607 CCAGATGGACCAGGCCGTTA 61.623 60.000 0.00 0.00 37.39 3.18
2471 2549 0.179073 CAGATGGACCAGGCCGTTAG 60.179 60.000 0.00 0.00 0.00 2.34
2472 2550 1.146263 GATGGACCAGGCCGTTAGG 59.854 63.158 0.00 0.34 41.62 2.69
2473 2551 2.325393 GATGGACCAGGCCGTTAGGG 62.325 65.000 0.00 0.00 38.20 3.53
2474 2552 3.007323 GGACCAGGCCGTTAGGGT 61.007 66.667 0.00 0.82 38.44 4.34
2475 2553 2.599757 GGACCAGGCCGTTAGGGTT 61.600 63.158 0.00 0.00 38.44 4.11
2476 2554 1.376812 GACCAGGCCGTTAGGGTTG 60.377 63.158 0.00 0.00 38.44 3.77
2477 2555 2.750237 CCAGGCCGTTAGGGTTGC 60.750 66.667 0.00 0.00 38.44 4.17
2478 2556 2.750237 CAGGCCGTTAGGGTTGCC 60.750 66.667 0.00 0.00 44.35 4.52
2479 2557 3.253838 AGGCCGTTAGGGTTGCCA 61.254 61.111 0.00 0.00 46.45 4.92
2480 2558 2.750237 GGCCGTTAGGGTTGCCAG 60.750 66.667 0.00 0.00 43.46 4.85
2481 2559 2.750237 GCCGTTAGGGTTGCCAGG 60.750 66.667 0.00 0.00 38.44 4.45
2482 2560 2.045340 CCGTTAGGGTTGCCAGGG 60.045 66.667 0.00 0.00 0.00 4.45
2483 2561 2.754375 CGTTAGGGTTGCCAGGGT 59.246 61.111 0.00 0.00 0.00 4.34
2484 2562 1.674322 CGTTAGGGTTGCCAGGGTG 60.674 63.158 0.00 0.00 0.00 4.61
2485 2563 1.304134 GTTAGGGTTGCCAGGGTGG 60.304 63.158 0.00 0.00 41.55 4.61
2502 2580 2.201927 GGCCAAGCCCTTACAATGG 58.798 57.895 0.00 0.00 44.06 3.16
2507 2585 2.044352 GCCCTTACAATGGCCCGT 60.044 61.111 0.00 0.00 41.97 5.28
2508 2586 2.414785 GCCCTTACAATGGCCCGTG 61.415 63.158 0.00 0.00 41.97 4.94
2509 2587 1.752694 CCCTTACAATGGCCCGTGG 60.753 63.158 0.00 0.00 0.00 4.94
2510 2588 1.752694 CCTTACAATGGCCCGTGGG 60.753 63.158 0.00 0.00 38.57 4.61
2522 2600 3.461773 CGTGGGGGAGCTCGTGAT 61.462 66.667 7.83 0.00 0.00 3.06
2523 2601 2.501610 GTGGGGGAGCTCGTGATC 59.498 66.667 7.83 0.00 0.00 2.92
2524 2602 2.038813 TGGGGGAGCTCGTGATCA 59.961 61.111 7.83 0.00 0.00 2.92
2525 2603 1.383109 TGGGGGAGCTCGTGATCAT 60.383 57.895 7.83 0.00 0.00 2.45
2526 2604 1.369321 GGGGGAGCTCGTGATCATC 59.631 63.158 7.83 0.00 0.00 2.92
2527 2605 1.006805 GGGGAGCTCGTGATCATCG 60.007 63.158 7.83 5.00 0.00 3.84
2528 2606 1.456196 GGGGAGCTCGTGATCATCGA 61.456 60.000 7.83 16.03 35.96 3.59
2529 2607 0.385751 GGGAGCTCGTGATCATCGAA 59.614 55.000 17.09 6.04 36.89 3.71
2530 2608 1.601663 GGGAGCTCGTGATCATCGAAG 60.602 57.143 17.09 13.18 36.89 3.79
2531 2609 1.066303 GGAGCTCGTGATCATCGAAGT 59.934 52.381 17.09 9.92 36.89 3.01
2532 2610 2.290916 GGAGCTCGTGATCATCGAAGTA 59.709 50.000 17.09 1.23 36.89 2.24
2533 2611 3.057876 GGAGCTCGTGATCATCGAAGTAT 60.058 47.826 17.09 7.25 36.89 2.12
2534 2612 4.154375 GGAGCTCGTGATCATCGAAGTATA 59.846 45.833 17.09 0.41 36.89 1.47
2535 2613 5.037015 AGCTCGTGATCATCGAAGTATAC 57.963 43.478 17.09 0.00 36.89 1.47
2536 2614 4.083217 AGCTCGTGATCATCGAAGTATACC 60.083 45.833 17.09 5.02 36.89 2.73
2537 2615 4.320275 GCTCGTGATCATCGAAGTATACCA 60.320 45.833 17.09 0.00 36.89 3.25
2538 2616 5.104562 TCGTGATCATCGAAGTATACCAC 57.895 43.478 15.03 0.00 34.36 4.16
2539 2617 4.820173 TCGTGATCATCGAAGTATACCACT 59.180 41.667 15.03 0.00 40.05 4.00
2540 2618 4.912187 CGTGATCATCGAAGTATACCACTG 59.088 45.833 0.00 0.00 37.63 3.66
2541 2619 5.223382 GTGATCATCGAAGTATACCACTGG 58.777 45.833 0.00 0.00 37.63 4.00
2542 2620 5.009710 GTGATCATCGAAGTATACCACTGGA 59.990 44.000 0.71 0.00 37.63 3.86
2543 2621 5.241728 TGATCATCGAAGTATACCACTGGAG 59.758 44.000 0.71 0.00 37.63 3.86
2544 2622 3.889538 TCATCGAAGTATACCACTGGAGG 59.110 47.826 0.71 0.00 37.63 4.30
2545 2623 3.657398 TCGAAGTATACCACTGGAGGA 57.343 47.619 0.71 0.00 37.63 3.71
2546 2624 3.972133 TCGAAGTATACCACTGGAGGAA 58.028 45.455 0.71 0.00 37.63 3.36
2547 2625 3.698040 TCGAAGTATACCACTGGAGGAAC 59.302 47.826 0.71 0.00 37.63 3.62
2548 2626 3.700038 CGAAGTATACCACTGGAGGAACT 59.300 47.826 0.71 0.00 38.86 3.01
2549 2627 4.202030 CGAAGTATACCACTGGAGGAACTC 60.202 50.000 0.71 0.00 46.76 3.01
2550 2628 4.949121 AAGTATACCACTGGAGGAACTCT 58.051 43.478 0.71 0.00 46.70 3.24
2551 2629 5.342866 AAGTATACCACTGGAGGAACTCTT 58.657 41.667 0.71 0.00 46.70 2.85
2552 2630 5.422650 AAGTATACCACTGGAGGAACTCTTC 59.577 44.000 0.71 0.00 46.70 2.87
2553 2631 7.803110 AAGTATACCACTGGAGGAACTCTTCG 61.803 46.154 0.71 0.00 46.70 3.79
2561 2639 2.810870 AGGAACTCTTCGGAGCTAGA 57.189 50.000 0.00 0.00 45.43 2.43
2562 2640 3.088789 AGGAACTCTTCGGAGCTAGAA 57.911 47.619 0.00 4.34 45.43 2.10
2563 2641 3.020984 AGGAACTCTTCGGAGCTAGAAG 58.979 50.000 19.78 19.78 45.43 2.85
2564 2642 2.100087 GGAACTCTTCGGAGCTAGAAGG 59.900 54.545 23.28 17.95 45.43 3.46
2565 2643 2.810870 ACTCTTCGGAGCTAGAAGGA 57.189 50.000 23.28 13.49 45.43 3.36
2566 2644 2.650322 ACTCTTCGGAGCTAGAAGGAG 58.350 52.381 23.28 20.47 45.43 3.69
2567 2645 1.953686 CTCTTCGGAGCTAGAAGGAGG 59.046 57.143 23.28 14.04 43.75 4.30
2568 2646 1.036707 CTTCGGAGCTAGAAGGAGGG 58.963 60.000 18.65 0.20 40.87 4.30
2569 2647 0.397254 TTCGGAGCTAGAAGGAGGGG 60.397 60.000 0.00 0.00 0.00 4.79
2570 2648 1.834822 CGGAGCTAGAAGGAGGGGG 60.835 68.421 0.00 0.00 0.00 5.40
2599 2677 4.643387 GCACCCAGGCCAGAACGT 62.643 66.667 5.01 0.00 0.00 3.99
2600 2678 2.358737 CACCCAGGCCAGAACGTC 60.359 66.667 5.01 0.00 0.00 4.34
2601 2679 2.847234 ACCCAGGCCAGAACGTCA 60.847 61.111 5.01 0.00 0.00 4.35
2602 2680 2.224159 ACCCAGGCCAGAACGTCAT 61.224 57.895 5.01 0.00 0.00 3.06
2603 2681 1.746615 CCCAGGCCAGAACGTCATG 60.747 63.158 5.01 0.00 0.00 3.07
2604 2682 2.401766 CCAGGCCAGAACGTCATGC 61.402 63.158 5.01 0.00 0.00 4.06
2605 2683 2.045926 AGGCCAGAACGTCATGCC 60.046 61.111 5.01 9.56 42.48 4.40
2606 2684 2.359850 GGCCAGAACGTCATGCCA 60.360 61.111 0.00 0.00 41.76 4.92
2607 2685 2.401766 GGCCAGAACGTCATGCCAG 61.402 63.158 0.00 0.00 41.76 4.85
2608 2686 1.375908 GCCAGAACGTCATGCCAGA 60.376 57.895 0.00 0.00 0.00 3.86
2609 2687 0.745845 GCCAGAACGTCATGCCAGAT 60.746 55.000 0.00 0.00 0.00 2.90
2610 2688 1.293924 CCAGAACGTCATGCCAGATC 58.706 55.000 0.00 0.00 0.00 2.75
2611 2689 1.134580 CCAGAACGTCATGCCAGATCT 60.135 52.381 0.00 0.00 0.00 2.75
2612 2690 1.931841 CAGAACGTCATGCCAGATCTG 59.068 52.381 16.24 16.24 0.00 2.90
2613 2691 0.654683 GAACGTCATGCCAGATCTGC 59.345 55.000 17.76 12.97 0.00 4.26
2614 2692 0.745845 AACGTCATGCCAGATCTGCC 60.746 55.000 17.76 7.02 0.00 4.85
2615 2693 1.145598 CGTCATGCCAGATCTGCCT 59.854 57.895 17.76 3.40 0.00 4.75
2616 2694 0.390492 CGTCATGCCAGATCTGCCTA 59.610 55.000 17.76 5.77 0.00 3.93
2617 2695 1.604947 CGTCATGCCAGATCTGCCTAG 60.605 57.143 17.76 4.77 0.00 3.02
2618 2696 1.690893 GTCATGCCAGATCTGCCTAGA 59.309 52.381 17.76 9.30 37.35 2.43
2619 2697 1.969208 TCATGCCAGATCTGCCTAGAG 59.031 52.381 17.76 3.64 36.14 2.43
2620 2698 1.969208 CATGCCAGATCTGCCTAGAGA 59.031 52.381 17.76 0.00 36.14 3.10
2621 2699 2.165357 TGCCAGATCTGCCTAGAGAA 57.835 50.000 17.76 0.00 36.14 2.87
2622 2700 2.037901 TGCCAGATCTGCCTAGAGAAG 58.962 52.381 17.76 1.40 36.14 2.85
2624 2702 1.969923 CCAGATCTGCCTAGAGAAGGG 59.030 57.143 17.76 0.00 46.65 3.95
2625 2703 1.969923 CAGATCTGCCTAGAGAAGGGG 59.030 57.143 10.38 0.00 46.65 4.79
2626 2704 0.684535 GATCTGCCTAGAGAAGGGGC 59.315 60.000 0.00 0.00 46.65 5.80
2629 2707 3.235369 GCCTAGAGAAGGGGCAGG 58.765 66.667 0.00 0.00 46.65 4.85
2630 2708 3.113514 GCCTAGAGAAGGGGCAGGC 62.114 68.421 0.00 0.00 46.65 4.85
2631 2709 2.801631 CCTAGAGAAGGGGCAGGCG 61.802 68.421 0.00 0.00 42.32 5.52
2632 2710 1.758514 CTAGAGAAGGGGCAGGCGA 60.759 63.158 0.00 0.00 0.00 5.54
2633 2711 1.075226 TAGAGAAGGGGCAGGCGAT 60.075 57.895 0.00 0.00 0.00 4.58
2634 2712 1.402896 TAGAGAAGGGGCAGGCGATG 61.403 60.000 0.00 0.00 0.00 3.84
2635 2713 2.688666 AGAAGGGGCAGGCGATGA 60.689 61.111 0.00 0.00 0.00 2.92
2636 2714 2.049627 GAGAAGGGGCAGGCGATGAT 62.050 60.000 0.00 0.00 0.00 2.45
2637 2715 0.764369 AGAAGGGGCAGGCGATGATA 60.764 55.000 0.00 0.00 0.00 2.15
2638 2716 0.108585 GAAGGGGCAGGCGATGATAA 59.891 55.000 0.00 0.00 0.00 1.75
2639 2717 0.773644 AAGGGGCAGGCGATGATAAT 59.226 50.000 0.00 0.00 0.00 1.28
2640 2718 1.656587 AGGGGCAGGCGATGATAATA 58.343 50.000 0.00 0.00 0.00 0.98
2641 2719 2.200081 AGGGGCAGGCGATGATAATAT 58.800 47.619 0.00 0.00 0.00 1.28
2642 2720 2.092753 AGGGGCAGGCGATGATAATATG 60.093 50.000 0.00 0.00 0.00 1.78
2643 2721 1.672881 GGGCAGGCGATGATAATATGC 59.327 52.381 0.00 0.00 0.00 3.14
2644 2722 2.636830 GGCAGGCGATGATAATATGCT 58.363 47.619 0.00 0.00 32.89 3.79
2645 2723 2.353889 GGCAGGCGATGATAATATGCTG 59.646 50.000 0.00 0.00 32.89 4.41
2646 2724 2.223203 GCAGGCGATGATAATATGCTGC 60.223 50.000 0.00 0.00 0.00 5.25
2647 2725 3.004862 CAGGCGATGATAATATGCTGCA 58.995 45.455 4.13 4.13 0.00 4.41
2648 2726 3.626217 CAGGCGATGATAATATGCTGCAT 59.374 43.478 20.18 20.18 0.00 3.96
2649 2727 3.626217 AGGCGATGATAATATGCTGCATG 59.374 43.478 24.59 5.96 0.00 4.06
2650 2728 3.242969 GGCGATGATAATATGCTGCATGG 60.243 47.826 24.59 0.00 0.00 3.66
2651 2729 3.376234 GCGATGATAATATGCTGCATGGT 59.624 43.478 24.59 14.16 0.00 3.55
2652 2730 4.495349 GCGATGATAATATGCTGCATGGTC 60.495 45.833 24.59 15.80 0.00 4.02
2653 2731 4.874396 CGATGATAATATGCTGCATGGTCT 59.126 41.667 24.59 7.28 0.00 3.85
2654 2732 5.006455 CGATGATAATATGCTGCATGGTCTC 59.994 44.000 24.59 15.40 0.00 3.36
2655 2733 5.231702 TGATAATATGCTGCATGGTCTCA 57.768 39.130 24.59 17.49 0.00 3.27
2656 2734 5.623169 TGATAATATGCTGCATGGTCTCAA 58.377 37.500 24.59 3.33 0.00 3.02
2657 2735 5.471116 TGATAATATGCTGCATGGTCTCAAC 59.529 40.000 24.59 9.02 0.00 3.18
2658 2736 2.785540 TATGCTGCATGGTCTCAACA 57.214 45.000 24.59 0.00 0.00 3.33
2659 2737 1.460504 ATGCTGCATGGTCTCAACAG 58.539 50.000 15.44 0.00 35.50 3.16
2660 2738 1.505353 GCTGCATGGTCTCAACAGC 59.495 57.895 3.92 3.92 44.25 4.40
2661 2739 1.930908 GCTGCATGGTCTCAACAGCC 61.931 60.000 7.71 0.00 44.50 4.85
2662 2740 0.322277 CTGCATGGTCTCAACAGCCT 60.322 55.000 0.00 0.00 0.00 4.58
2663 2741 0.607217 TGCATGGTCTCAACAGCCTG 60.607 55.000 0.00 0.00 0.00 4.85
2664 2742 0.321919 GCATGGTCTCAACAGCCTGA 60.322 55.000 0.00 0.00 0.00 3.86
2665 2743 1.681166 GCATGGTCTCAACAGCCTGAT 60.681 52.381 0.00 0.00 0.00 2.90
2666 2744 2.286872 CATGGTCTCAACAGCCTGATC 58.713 52.381 0.00 0.00 0.00 2.92
2667 2745 0.247460 TGGTCTCAACAGCCTGATCG 59.753 55.000 0.00 0.00 0.00 3.69
2668 2746 1.086634 GGTCTCAACAGCCTGATCGC 61.087 60.000 0.00 0.00 0.00 4.58
2669 2747 0.390340 GTCTCAACAGCCTGATCGCA 60.390 55.000 0.00 0.00 0.00 5.10
2670 2748 0.321346 TCTCAACAGCCTGATCGCAA 59.679 50.000 0.00 0.00 0.00 4.85
2671 2749 1.159285 CTCAACAGCCTGATCGCAAA 58.841 50.000 0.00 0.00 0.00 3.68
2672 2750 1.129998 CTCAACAGCCTGATCGCAAAG 59.870 52.381 0.00 0.00 0.00 2.77
2673 2751 1.159285 CAACAGCCTGATCGCAAAGA 58.841 50.000 0.00 0.00 0.00 2.52
2674 2752 1.536766 CAACAGCCTGATCGCAAAGAA 59.463 47.619 0.00 0.00 0.00 2.52
2675 2753 1.160137 ACAGCCTGATCGCAAAGAAC 58.840 50.000 0.00 0.00 0.00 3.01
2676 2754 0.095935 CAGCCTGATCGCAAAGAACG 59.904 55.000 0.00 0.00 0.00 3.95
2677 2755 1.226128 GCCTGATCGCAAAGAACGC 60.226 57.895 0.00 0.00 0.00 4.84
2678 2756 1.911293 GCCTGATCGCAAAGAACGCA 61.911 55.000 0.00 0.00 0.00 5.24
2679 2757 0.729116 CCTGATCGCAAAGAACGCAT 59.271 50.000 0.00 0.00 0.00 4.73
2680 2758 1.267732 CCTGATCGCAAAGAACGCATC 60.268 52.381 0.00 0.00 0.00 3.91
2681 2759 0.369931 TGATCGCAAAGAACGCATCG 59.630 50.000 0.00 0.00 0.00 3.84
2682 2760 0.315382 GATCGCAAAGAACGCATCGG 60.315 55.000 0.00 0.00 0.00 4.18
2683 2761 1.019278 ATCGCAAAGAACGCATCGGT 61.019 50.000 0.00 0.00 0.00 4.69
2684 2762 1.225745 CGCAAAGAACGCATCGGTC 60.226 57.895 0.00 0.00 44.66 4.79
2690 2768 3.240203 AACGCATCGGTCGTTGTG 58.760 55.556 11.78 11.78 46.73 3.33
2691 2769 2.950172 AACGCATCGGTCGTTGTGC 61.950 57.895 12.88 10.08 46.73 4.57
2693 2771 4.147322 GCATCGGTCGTTGTGCGG 62.147 66.667 3.84 0.00 41.72 5.69
2694 2772 2.431771 CATCGGTCGTTGTGCGGA 60.432 61.111 0.00 0.00 41.72 5.54
2695 2773 2.024868 CATCGGTCGTTGTGCGGAA 61.025 57.895 0.00 0.00 41.72 4.30
2696 2774 1.736645 ATCGGTCGTTGTGCGGAAG 60.737 57.895 0.00 0.00 41.72 3.46
2697 2775 2.149803 ATCGGTCGTTGTGCGGAAGA 62.150 55.000 0.00 0.00 41.72 2.87
2698 2776 2.654912 CGGTCGTTGTGCGGAAGAC 61.655 63.158 0.00 0.00 41.72 3.01
2699 2777 2.315386 GGTCGTTGTGCGGAAGACC 61.315 63.158 6.43 6.43 43.55 3.85
2715 2793 4.003788 CCGTGACGGGCCAGTCTT 62.004 66.667 31.83 0.29 44.15 3.01
2716 2794 2.738521 CGTGACGGGCCAGTCTTG 60.739 66.667 31.83 21.62 41.47 3.02
2717 2795 3.050275 GTGACGGGCCAGTCTTGC 61.050 66.667 31.83 19.79 41.47 4.01
2718 2796 4.680237 TGACGGGCCAGTCTTGCG 62.680 66.667 31.83 14.95 41.47 4.85
2725 2803 2.743928 CCAGTCTTGCGGCAGTCC 60.744 66.667 1.67 0.00 0.00 3.85
2726 2804 2.031012 CAGTCTTGCGGCAGTCCA 59.969 61.111 1.67 0.00 0.00 4.02
2727 2805 2.031516 CAGTCTTGCGGCAGTCCAG 61.032 63.158 1.67 0.00 0.00 3.86
2728 2806 3.426568 GTCTTGCGGCAGTCCAGC 61.427 66.667 1.67 0.00 34.17 4.85
2729 2807 3.939939 TCTTGCGGCAGTCCAGCA 61.940 61.111 1.67 0.00 39.09 4.41
2730 2808 3.429141 CTTGCGGCAGTCCAGCAG 61.429 66.667 1.67 0.00 40.79 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.556030 GCAAAATAGTCCACAGTCTTAAAATAC 57.444 33.333 0.00 0.00 0.00 1.89
2 3 9.515226 AGCAAAATAGTCCACAGTCTTAAAATA 57.485 29.630 0.00 0.00 0.00 1.40
3 4 8.409358 AGCAAAATAGTCCACAGTCTTAAAAT 57.591 30.769 0.00 0.00 0.00 1.82
4 5 7.040686 GGAGCAAAATAGTCCACAGTCTTAAAA 60.041 37.037 0.00 0.00 0.00 1.52
5 6 6.430000 GGAGCAAAATAGTCCACAGTCTTAAA 59.570 38.462 0.00 0.00 0.00 1.52
6 7 5.938125 GGAGCAAAATAGTCCACAGTCTTAA 59.062 40.000 0.00 0.00 0.00 1.85
7 8 5.248477 AGGAGCAAAATAGTCCACAGTCTTA 59.752 40.000 0.00 0.00 32.23 2.10
8 9 4.042187 AGGAGCAAAATAGTCCACAGTCTT 59.958 41.667 0.00 0.00 32.23 3.01
9 10 3.584848 AGGAGCAAAATAGTCCACAGTCT 59.415 43.478 0.00 0.00 32.23 3.24
10 11 3.944087 AGGAGCAAAATAGTCCACAGTC 58.056 45.455 0.00 0.00 32.23 3.51
11 12 4.373156 AAGGAGCAAAATAGTCCACAGT 57.627 40.909 0.00 0.00 32.23 3.55
12 13 6.817765 TTAAAGGAGCAAAATAGTCCACAG 57.182 37.500 0.00 0.00 32.23 3.66
13 14 8.871629 TTATTAAAGGAGCAAAATAGTCCACA 57.128 30.769 0.00 0.00 32.23 4.17
45 46 3.627123 GGCAAAACTCCACTGCAATTTTT 59.373 39.130 0.00 0.00 37.83 1.94
46 47 3.205338 GGCAAAACTCCACTGCAATTTT 58.795 40.909 0.00 0.00 37.83 1.82
47 48 2.485302 GGGCAAAACTCCACTGCAATTT 60.485 45.455 0.00 0.00 37.83 1.82
48 49 1.070601 GGGCAAAACTCCACTGCAATT 59.929 47.619 0.00 0.00 37.83 2.32
49 50 0.681175 GGGCAAAACTCCACTGCAAT 59.319 50.000 0.00 0.00 37.83 3.56
50 51 0.396974 AGGGCAAAACTCCACTGCAA 60.397 50.000 0.00 0.00 37.83 4.08
51 52 0.476338 TAGGGCAAAACTCCACTGCA 59.524 50.000 0.00 0.00 37.83 4.41
52 53 0.881796 GTAGGGCAAAACTCCACTGC 59.118 55.000 0.00 0.00 35.28 4.40
53 54 2.154462 CAGTAGGGCAAAACTCCACTG 58.846 52.381 0.00 0.00 0.00 3.66
54 55 1.774856 ACAGTAGGGCAAAACTCCACT 59.225 47.619 0.00 0.00 0.00 4.00
55 56 1.880027 CACAGTAGGGCAAAACTCCAC 59.120 52.381 0.00 0.00 0.00 4.02
56 57 1.493022 ACACAGTAGGGCAAAACTCCA 59.507 47.619 0.00 0.00 0.00 3.86
57 58 2.271944 ACACAGTAGGGCAAAACTCC 57.728 50.000 0.00 0.00 0.00 3.85
58 59 5.731591 ACTATACACAGTAGGGCAAAACTC 58.268 41.667 0.00 0.00 0.00 3.01
59 60 5.247564 TGACTATACACAGTAGGGCAAAACT 59.752 40.000 0.00 0.00 0.00 2.66
60 61 5.484715 TGACTATACACAGTAGGGCAAAAC 58.515 41.667 0.00 0.00 0.00 2.43
61 62 5.748670 TGACTATACACAGTAGGGCAAAA 57.251 39.130 0.00 0.00 0.00 2.44
62 63 5.748670 TTGACTATACACAGTAGGGCAAA 57.251 39.130 0.00 0.00 0.00 3.68
63 64 5.748670 TTTGACTATACACAGTAGGGCAA 57.251 39.130 0.00 0.00 0.00 4.52
64 65 5.748670 TTTTGACTATACACAGTAGGGCA 57.251 39.130 0.00 0.00 0.00 5.36
105 106 2.026729 TCCCATCGTAATTTGCCAGACA 60.027 45.455 0.00 0.00 0.00 3.41
128 129 5.105877 CGTCCAATCACTAGTTGGTTCTCTA 60.106 44.000 11.09 0.00 45.05 2.43
221 222 6.944862 ACTTCCACTGAAAGATATTCTGCTTT 59.055 34.615 0.00 0.00 37.43 3.51
222 223 6.479884 ACTTCCACTGAAAGATATTCTGCTT 58.520 36.000 0.00 0.00 37.43 3.91
247 249 3.680937 CCTCGCCATAGACAAAAACGTTA 59.319 43.478 0.00 0.00 0.00 3.18
251 253 1.202031 CGCCTCGCCATAGACAAAAAC 60.202 52.381 0.00 0.00 0.00 2.43
265 267 4.025401 AAAAACGCAGGCGCCTCG 62.025 61.111 32.51 32.51 44.19 4.63
308 314 7.390027 CCTTATCTAATGATAGTGGAACCTGG 58.610 42.308 0.00 0.00 36.62 4.45
309 315 7.235606 TCCCTTATCTAATGATAGTGGAACCTG 59.764 40.741 0.00 0.00 35.55 4.00
322 328 9.618890 TTCTGATCTTTGTTCCCTTATCTAATG 57.381 33.333 0.00 0.00 0.00 1.90
332 338 5.243730 TGGACATTTTCTGATCTTTGTTCCC 59.756 40.000 0.00 0.00 0.00 3.97
343 349 6.403049 TCTTTACGCTATGGACATTTTCTGA 58.597 36.000 0.00 0.00 0.00 3.27
351 357 4.811969 TCCTTTCTTTACGCTATGGACA 57.188 40.909 0.00 0.00 0.00 4.02
375 381 4.494855 GCGTCTTGCTTGTCTTCCATTATC 60.495 45.833 0.00 0.00 41.73 1.75
380 386 0.884704 GGCGTCTTGCTTGTCTTCCA 60.885 55.000 0.00 0.00 45.43 3.53
381 387 0.603975 AGGCGTCTTGCTTGTCTTCC 60.604 55.000 0.00 0.00 45.43 3.46
392 399 3.244078 TGACAAAGTCACATAGGCGTCTT 60.244 43.478 0.00 0.00 37.67 3.01
395 402 2.831685 TGACAAAGTCACATAGGCGT 57.168 45.000 0.00 0.00 37.67 5.68
398 405 6.875726 TCTTGAGATTGACAAAGTCACATAGG 59.124 38.462 0.00 0.00 42.60 2.57
407 414 5.007430 CCGATGGATCTTGAGATTGACAAAG 59.993 44.000 0.00 0.00 34.37 2.77
428 435 1.000955 GTCCTCAAAAGACTGAGCCGA 59.999 52.381 0.00 0.00 41.36 5.54
477 485 8.846943 TCACAAACACATACAGACATTAATCT 57.153 30.769 0.00 0.00 0.00 2.40
487 495 6.363577 ACAAACTCTCACAAACACATACAG 57.636 37.500 0.00 0.00 0.00 2.74
492 500 7.151999 ACAAATACAAACTCTCACAAACACA 57.848 32.000 0.00 0.00 0.00 3.72
541 549 7.229306 ACATACAAGCCATGTGTATATTTCCAG 59.771 37.037 7.03 0.00 43.77 3.86
544 552 9.489084 TCTACATACAAGCCATGTGTATATTTC 57.511 33.333 7.03 0.00 43.77 2.17
588 596 1.332375 TGCTGAACGTGGTTAACAAGC 59.668 47.619 8.10 5.18 31.20 4.01
674 683 0.178990 GGTTGGGTCAACTGCTTCCT 60.179 55.000 10.10 0.00 43.14 3.36
761 770 1.006102 CACTCTCTGCGTTCCCGTT 60.006 57.895 0.00 0.00 36.15 4.44
837 849 1.585521 CATGTCGACGGCGGAGTAC 60.586 63.158 12.58 0.81 38.28 2.73
1490 1562 4.056125 CCTGCGCCGTCTCTGACA 62.056 66.667 4.18 0.00 32.09 3.58
1792 1870 2.333688 TCGATGGACTGTCTCGAGAT 57.666 50.000 19.90 1.81 36.57 2.75
1874 1952 2.096248 GAGAGGAATGAGGAGACACGT 58.904 52.381 0.00 0.00 0.00 4.49
1902 1980 4.495472 CACAAAAACTGCTTGTACGTCTTG 59.505 41.667 0.00 0.00 35.26 3.02
1948 2026 0.108138 CGTGTCATTGTCTCCCTCCC 60.108 60.000 0.00 0.00 0.00 4.30
2256 2334 0.102120 CCGTCTTGCCTTTTGTGCAA 59.898 50.000 0.00 0.00 45.83 4.08
2257 2335 1.732917 CCGTCTTGCCTTTTGTGCA 59.267 52.632 0.00 0.00 36.84 4.57
2258 2336 1.007387 CCCGTCTTGCCTTTTGTGC 60.007 57.895 0.00 0.00 0.00 4.57
2259 2337 0.821711 TCCCCGTCTTGCCTTTTGTG 60.822 55.000 0.00 0.00 0.00 3.33
2260 2338 0.537371 CTCCCCGTCTTGCCTTTTGT 60.537 55.000 0.00 0.00 0.00 2.83
2261 2339 1.866853 GCTCCCCGTCTTGCCTTTTG 61.867 60.000 0.00 0.00 0.00 2.44
2262 2340 1.603739 GCTCCCCGTCTTGCCTTTT 60.604 57.895 0.00 0.00 0.00 2.27
2263 2341 2.034221 GCTCCCCGTCTTGCCTTT 59.966 61.111 0.00 0.00 0.00 3.11
2264 2342 3.249189 TGCTCCCCGTCTTGCCTT 61.249 61.111 0.00 0.00 0.00 4.35
2265 2343 3.710722 CTGCTCCCCGTCTTGCCT 61.711 66.667 0.00 0.00 0.00 4.75
2266 2344 4.021925 ACTGCTCCCCGTCTTGCC 62.022 66.667 0.00 0.00 0.00 4.52
2267 2345 2.743928 CACTGCTCCCCGTCTTGC 60.744 66.667 0.00 0.00 0.00 4.01
2268 2346 2.046892 CCACTGCTCCCCGTCTTG 60.047 66.667 0.00 0.00 0.00 3.02
2269 2347 2.526873 ACCACTGCTCCCCGTCTT 60.527 61.111 0.00 0.00 0.00 3.01
2270 2348 3.314331 CACCACTGCTCCCCGTCT 61.314 66.667 0.00 0.00 0.00 4.18
2271 2349 3.311110 TCACCACTGCTCCCCGTC 61.311 66.667 0.00 0.00 0.00 4.79
2272 2350 3.626924 GTCACCACTGCTCCCCGT 61.627 66.667 0.00 0.00 0.00 5.28
2273 2351 3.596066 CTGTCACCACTGCTCCCCG 62.596 68.421 0.00 0.00 0.00 5.73
2274 2352 2.348998 CTGTCACCACTGCTCCCC 59.651 66.667 0.00 0.00 0.00 4.81
2275 2353 2.348998 CCTGTCACCACTGCTCCC 59.651 66.667 0.00 0.00 0.00 4.30
2276 2354 2.359230 GCCTGTCACCACTGCTCC 60.359 66.667 0.00 0.00 0.00 4.70
2277 2355 1.670406 CAGCCTGTCACCACTGCTC 60.670 63.158 0.00 0.00 31.38 4.26
2278 2356 2.429058 CAGCCTGTCACCACTGCT 59.571 61.111 0.00 0.00 33.25 4.24
2280 2358 1.670406 GAGCAGCCTGTCACCACTG 60.670 63.158 0.00 0.00 0.00 3.66
2281 2359 2.109517 CTGAGCAGCCTGTCACCACT 62.110 60.000 0.00 0.00 0.00 4.00
2282 2360 1.670406 CTGAGCAGCCTGTCACCAC 60.670 63.158 0.00 0.00 0.00 4.16
2283 2361 2.745698 CTGAGCAGCCTGTCACCA 59.254 61.111 0.00 0.00 0.00 4.17
2293 2371 2.463589 TTTGTACCCGGGCTGAGCAG 62.464 60.000 24.08 0.00 0.00 4.24
2294 2372 1.847798 ATTTGTACCCGGGCTGAGCA 61.848 55.000 24.08 9.79 0.00 4.26
2295 2373 1.077716 ATTTGTACCCGGGCTGAGC 60.078 57.895 24.08 6.92 0.00 4.26
2296 2374 0.541863 AGATTTGTACCCGGGCTGAG 59.458 55.000 24.08 0.00 0.00 3.35
2297 2375 1.868713 TAGATTTGTACCCGGGCTGA 58.131 50.000 24.08 2.49 0.00 4.26
2298 2376 2.169769 TCTTAGATTTGTACCCGGGCTG 59.830 50.000 24.08 0.00 0.00 4.85
2299 2377 2.474112 TCTTAGATTTGTACCCGGGCT 58.526 47.619 24.08 10.40 0.00 5.19
2300 2378 2.994186 TCTTAGATTTGTACCCGGGC 57.006 50.000 24.08 5.60 0.00 6.13
2301 2379 3.646637 AGGATCTTAGATTTGTACCCGGG 59.353 47.826 22.25 22.25 0.00 5.73
2302 2380 4.957684 AGGATCTTAGATTTGTACCCGG 57.042 45.455 0.00 0.00 0.00 5.73
2303 2381 5.869888 GCATAGGATCTTAGATTTGTACCCG 59.130 44.000 0.00 0.00 0.00 5.28
2304 2382 6.174049 GGCATAGGATCTTAGATTTGTACCC 58.826 44.000 0.00 0.00 0.00 3.69
2305 2383 6.769512 TGGCATAGGATCTTAGATTTGTACC 58.230 40.000 0.00 0.00 0.00 3.34
2306 2384 6.370166 GCTGGCATAGGATCTTAGATTTGTAC 59.630 42.308 0.00 0.00 0.00 2.90
2307 2385 6.043127 TGCTGGCATAGGATCTTAGATTTGTA 59.957 38.462 0.00 0.00 0.00 2.41
2308 2386 5.163163 TGCTGGCATAGGATCTTAGATTTGT 60.163 40.000 0.00 0.00 0.00 2.83
2309 2387 5.311265 TGCTGGCATAGGATCTTAGATTTG 58.689 41.667 0.00 0.00 0.00 2.32
2310 2388 5.573380 TGCTGGCATAGGATCTTAGATTT 57.427 39.130 0.00 0.00 0.00 2.17
2311 2389 5.312079 GTTGCTGGCATAGGATCTTAGATT 58.688 41.667 0.00 0.00 0.00 2.40
2312 2390 4.562347 CGTTGCTGGCATAGGATCTTAGAT 60.562 45.833 0.00 0.00 0.00 1.98
2313 2391 3.243873 CGTTGCTGGCATAGGATCTTAGA 60.244 47.826 0.00 0.00 0.00 2.10
2314 2392 3.062763 CGTTGCTGGCATAGGATCTTAG 58.937 50.000 0.00 0.00 0.00 2.18
2315 2393 2.698274 TCGTTGCTGGCATAGGATCTTA 59.302 45.455 0.00 0.00 0.00 2.10
2316 2394 1.486310 TCGTTGCTGGCATAGGATCTT 59.514 47.619 0.00 0.00 0.00 2.40
2317 2395 1.123077 TCGTTGCTGGCATAGGATCT 58.877 50.000 0.00 0.00 0.00 2.75
2318 2396 1.953559 TTCGTTGCTGGCATAGGATC 58.046 50.000 0.00 0.00 0.00 3.36
2319 2397 2.645838 ATTCGTTGCTGGCATAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
2320 2398 2.418368 AATTCGTTGCTGGCATAGGA 57.582 45.000 0.00 0.00 0.00 2.94
2321 2399 3.627577 ACTTAATTCGTTGCTGGCATAGG 59.372 43.478 0.00 0.00 0.00 2.57
2322 2400 4.260784 GGACTTAATTCGTTGCTGGCATAG 60.261 45.833 0.00 0.00 0.00 2.23
2323 2401 3.625764 GGACTTAATTCGTTGCTGGCATA 59.374 43.478 0.00 0.00 0.00 3.14
2324 2402 2.423538 GGACTTAATTCGTTGCTGGCAT 59.576 45.455 0.00 0.00 0.00 4.40
2325 2403 1.810151 GGACTTAATTCGTTGCTGGCA 59.190 47.619 0.00 0.00 0.00 4.92
2326 2404 1.202031 CGGACTTAATTCGTTGCTGGC 60.202 52.381 0.00 0.00 0.00 4.85
2327 2405 2.073816 ACGGACTTAATTCGTTGCTGG 58.926 47.619 0.00 0.00 32.95 4.85
2328 2406 2.724839 GCACGGACTTAATTCGTTGCTG 60.725 50.000 8.96 0.00 34.73 4.41
2329 2407 1.463444 GCACGGACTTAATTCGTTGCT 59.537 47.619 8.96 0.00 34.73 3.91
2330 2408 1.785518 CGCACGGACTTAATTCGTTGC 60.786 52.381 7.03 7.03 34.73 4.17
2331 2409 1.785518 GCGCACGGACTTAATTCGTTG 60.786 52.381 0.30 0.00 34.73 4.10
2332 2410 0.441145 GCGCACGGACTTAATTCGTT 59.559 50.000 0.30 0.00 34.73 3.85
2333 2411 1.680105 CGCGCACGGACTTAATTCGT 61.680 55.000 8.75 0.00 37.64 3.85
2334 2412 1.013755 CGCGCACGGACTTAATTCG 60.014 57.895 8.75 0.00 34.97 3.34
2335 2413 1.296649 GCGCGCACGGACTTAATTC 60.297 57.895 29.10 0.00 40.57 2.17
2336 2414 1.366111 ATGCGCGCACGGACTTAATT 61.366 50.000 39.05 14.13 44.64 1.40
2337 2415 1.813753 ATGCGCGCACGGACTTAAT 60.814 52.632 39.05 15.02 44.64 1.40
2338 2416 2.433491 ATGCGCGCACGGACTTAA 60.433 55.556 39.05 10.81 44.64 1.85
2339 2417 3.185365 CATGCGCGCACGGACTTA 61.185 61.111 39.05 11.72 44.64 2.24
2344 2422 4.159295 TAAAGCATGCGCGCACGG 62.159 61.111 39.05 31.04 45.49 4.94
2345 2423 2.645628 CTAAAGCATGCGCGCACG 60.646 61.111 39.05 31.85 45.49 5.34
2346 2424 2.946086 GCTAAAGCATGCGCGCAC 60.946 61.111 39.05 25.28 45.49 5.34
2347 2425 4.178214 GGCTAAAGCATGCGCGCA 62.178 61.111 38.27 38.27 45.49 6.09
2348 2426 4.912570 GGGCTAAAGCATGCGCGC 62.913 66.667 27.26 27.26 45.49 6.86
2349 2427 2.924922 CTTGGGCTAAAGCATGCGCG 62.925 60.000 13.01 0.00 45.49 6.86
2350 2428 1.226773 CTTGGGCTAAAGCATGCGC 60.227 57.895 13.01 9.51 44.36 6.09
2351 2429 0.379669 CTCTTGGGCTAAAGCATGCG 59.620 55.000 13.01 0.00 44.36 4.73
2352 2430 0.101939 GCTCTTGGGCTAAAGCATGC 59.898 55.000 10.51 10.51 44.36 4.06
2353 2431 0.379669 CGCTCTTGGGCTAAAGCATG 59.620 55.000 14.41 0.00 44.36 4.06
2354 2432 0.749454 CCGCTCTTGGGCTAAAGCAT 60.749 55.000 14.41 0.00 44.36 3.79
2355 2433 1.377202 CCGCTCTTGGGCTAAAGCA 60.377 57.895 14.41 0.00 44.36 3.91
2356 2434 2.115291 CCCGCTCTTGGGCTAAAGC 61.115 63.158 7.39 7.39 43.70 3.51
2357 2435 4.225497 CCCGCTCTTGGGCTAAAG 57.775 61.111 0.00 0.00 43.70 1.85
2364 2442 2.815647 GACGAAGCCCGCTCTTGG 60.816 66.667 0.00 0.00 43.32 3.61
2365 2443 3.181967 CGACGAAGCCCGCTCTTG 61.182 66.667 0.00 0.00 43.32 3.02
2371 2449 4.260355 TATCCGCGACGAAGCCCG 62.260 66.667 8.23 0.00 45.44 6.13
2372 2450 2.354773 CTATCCGCGACGAAGCCC 60.355 66.667 8.23 0.00 0.00 5.19
2373 2451 1.657794 GTCTATCCGCGACGAAGCC 60.658 63.158 8.23 0.00 0.00 4.35
2374 2452 3.905060 GTCTATCCGCGACGAAGC 58.095 61.111 8.23 0.00 0.00 3.86
2379 2457 2.637595 CTTCTTACGTCTATCCGCGAC 58.362 52.381 8.23 0.00 0.00 5.19
2380 2458 1.003116 GCTTCTTACGTCTATCCGCGA 60.003 52.381 8.23 0.00 0.00 5.87
2381 2459 1.396644 GCTTCTTACGTCTATCCGCG 58.603 55.000 0.00 0.00 0.00 6.46
2382 2460 1.768510 GGCTTCTTACGTCTATCCGC 58.231 55.000 0.00 0.00 0.00 5.54
2383 2461 1.332997 ACGGCTTCTTACGTCTATCCG 59.667 52.381 0.00 1.44 39.40 4.18
2384 2462 2.543238 CCACGGCTTCTTACGTCTATCC 60.543 54.545 0.00 0.00 42.04 2.59
2385 2463 2.543238 CCCACGGCTTCTTACGTCTATC 60.543 54.545 0.00 0.00 42.04 2.08
2386 2464 1.407979 CCCACGGCTTCTTACGTCTAT 59.592 52.381 0.00 0.00 42.04 1.98
2387 2465 0.813184 CCCACGGCTTCTTACGTCTA 59.187 55.000 0.00 0.00 42.04 2.59
2388 2466 1.590147 CCCACGGCTTCTTACGTCT 59.410 57.895 0.00 0.00 42.04 4.18
2389 2467 1.447314 CCCCACGGCTTCTTACGTC 60.447 63.158 0.00 0.00 42.04 4.34
2390 2468 2.660802 CCCCACGGCTTCTTACGT 59.339 61.111 0.00 0.00 45.25 3.57
2401 2479 4.530857 GTCATCCTCCGCCCCACG 62.531 72.222 0.00 0.00 43.15 4.94
2402 2480 3.083997 AGTCATCCTCCGCCCCAC 61.084 66.667 0.00 0.00 0.00 4.61
2403 2481 2.764128 GAGTCATCCTCCGCCCCA 60.764 66.667 0.00 0.00 33.79 4.96
2404 2482 3.917760 CGAGTCATCCTCCGCCCC 61.918 72.222 0.00 0.00 36.82 5.80
2405 2483 4.593864 GCGAGTCATCCTCCGCCC 62.594 72.222 0.00 0.00 36.82 6.13
2406 2484 4.593864 GGCGAGTCATCCTCCGCC 62.594 72.222 8.88 8.88 45.63 6.13
2407 2485 3.157217 ATGGCGAGTCATCCTCCGC 62.157 63.158 0.00 0.00 36.82 5.54
2408 2486 1.006805 GATGGCGAGTCATCCTCCG 60.007 63.158 6.42 0.00 38.00 4.63
2409 2487 0.465705 TTGATGGCGAGTCATCCTCC 59.534 55.000 14.22 0.00 41.97 4.30
2410 2488 2.315925 TTTGATGGCGAGTCATCCTC 57.684 50.000 14.22 0.00 41.97 3.71
2411 2489 3.733337 GTATTTGATGGCGAGTCATCCT 58.267 45.455 14.22 3.22 41.97 3.24
2412 2490 2.476619 CGTATTTGATGGCGAGTCATCC 59.523 50.000 14.22 0.00 41.97 3.51
2413 2491 2.096713 GCGTATTTGATGGCGAGTCATC 60.097 50.000 10.47 10.47 42.72 2.92
2414 2492 1.867233 GCGTATTTGATGGCGAGTCAT 59.133 47.619 0.00 0.00 0.00 3.06
2415 2493 1.286501 GCGTATTTGATGGCGAGTCA 58.713 50.000 0.00 0.00 0.00 3.41
2416 2494 1.286501 TGCGTATTTGATGGCGAGTC 58.713 50.000 0.00 0.00 0.00 3.36
2417 2495 1.867233 GATGCGTATTTGATGGCGAGT 59.133 47.619 0.00 0.00 0.00 4.18
2418 2496 1.136529 CGATGCGTATTTGATGGCGAG 60.137 52.381 0.00 0.00 0.00 5.03
2419 2497 0.858583 CGATGCGTATTTGATGGCGA 59.141 50.000 0.00 0.00 0.00 5.54
2420 2498 0.110688 CCGATGCGTATTTGATGGCG 60.111 55.000 0.00 0.00 0.00 5.69
2421 2499 0.944386 ACCGATGCGTATTTGATGGC 59.056 50.000 0.00 0.00 0.00 4.40
2422 2500 2.354510 ACAACCGATGCGTATTTGATGG 59.645 45.455 3.80 0.00 0.00 3.51
2423 2501 3.353524 CACAACCGATGCGTATTTGATG 58.646 45.455 3.80 0.00 0.00 3.07
2424 2502 2.223249 GCACAACCGATGCGTATTTGAT 60.223 45.455 3.80 0.00 32.45 2.57
2425 2503 1.129624 GCACAACCGATGCGTATTTGA 59.870 47.619 3.80 0.00 32.45 2.69
2426 2504 1.534028 GCACAACCGATGCGTATTTG 58.466 50.000 0.00 0.00 32.45 2.32
2427 2505 3.988459 GCACAACCGATGCGTATTT 57.012 47.368 0.00 0.00 32.45 1.40
2433 2511 1.154150 GAAGCAGCACAACCGATGC 60.154 57.895 0.00 0.00 43.74 3.91
2434 2512 1.236616 TGGAAGCAGCACAACCGATG 61.237 55.000 0.00 0.00 0.00 3.84
2435 2513 0.957395 CTGGAAGCAGCACAACCGAT 60.957 55.000 0.00 0.00 0.00 4.18
2436 2514 1.597854 CTGGAAGCAGCACAACCGA 60.598 57.895 0.00 0.00 0.00 4.69
2437 2515 0.957395 ATCTGGAAGCAGCACAACCG 60.957 55.000 0.00 0.00 0.00 4.44
2438 2516 0.524862 CATCTGGAAGCAGCACAACC 59.475 55.000 0.00 0.00 0.00 3.77
2439 2517 0.524862 CCATCTGGAAGCAGCACAAC 59.475 55.000 0.00 0.00 37.39 3.32
2440 2518 0.401356 TCCATCTGGAAGCAGCACAA 59.599 50.000 0.00 0.00 42.18 3.33
2441 2519 2.068915 TCCATCTGGAAGCAGCACA 58.931 52.632 0.00 0.00 42.18 4.57
2450 2528 3.083349 CGGCCTGGTCCATCTGGA 61.083 66.667 0.00 0.00 43.08 3.86
2451 2529 1.622607 TAACGGCCTGGTCCATCTGG 61.623 60.000 0.00 0.00 0.00 3.86
2452 2530 0.179073 CTAACGGCCTGGTCCATCTG 60.179 60.000 0.00 0.00 0.00 2.90
2453 2531 1.338136 CCTAACGGCCTGGTCCATCT 61.338 60.000 0.00 0.00 0.00 2.90
2454 2532 1.146263 CCTAACGGCCTGGTCCATC 59.854 63.158 0.00 0.00 0.00 3.51
2455 2533 2.375345 CCCTAACGGCCTGGTCCAT 61.375 63.158 0.00 0.00 0.00 3.41
2456 2534 3.006728 CCCTAACGGCCTGGTCCA 61.007 66.667 0.00 0.00 0.00 4.02
2457 2535 2.599757 AACCCTAACGGCCTGGTCC 61.600 63.158 0.00 0.00 33.26 4.46
2458 2536 1.376812 CAACCCTAACGGCCTGGTC 60.377 63.158 0.00 0.00 33.26 4.02
2459 2537 2.754375 CAACCCTAACGGCCTGGT 59.246 61.111 0.00 0.00 33.26 4.00
2460 2538 2.750237 GCAACCCTAACGGCCTGG 60.750 66.667 0.00 0.00 33.26 4.45
2461 2539 2.750237 GGCAACCCTAACGGCCTG 60.750 66.667 0.00 0.00 43.09 4.85
2462 2540 3.253838 TGGCAACCCTAACGGCCT 61.254 61.111 0.00 0.00 46.53 5.19
2463 2541 2.750237 CTGGCAACCCTAACGGCC 60.750 66.667 0.00 0.00 46.58 6.13
2464 2542 2.750237 CCTGGCAACCCTAACGGC 60.750 66.667 0.00 0.00 33.26 5.68
2465 2543 2.045340 CCCTGGCAACCCTAACGG 60.045 66.667 0.00 0.00 37.81 4.44
2466 2544 1.674322 CACCCTGGCAACCCTAACG 60.674 63.158 0.00 0.00 0.00 3.18
2467 2545 1.304134 CCACCCTGGCAACCCTAAC 60.304 63.158 0.00 0.00 0.00 2.34
2468 2546 3.176297 CCACCCTGGCAACCCTAA 58.824 61.111 0.00 0.00 0.00 2.69
2491 2569 1.752694 CCACGGGCCATTGTAAGGG 60.753 63.158 4.39 0.00 0.00 3.95
2492 2570 1.752694 CCCACGGGCCATTGTAAGG 60.753 63.158 4.39 0.46 0.00 2.69
2493 2571 1.752694 CCCCACGGGCCATTGTAAG 60.753 63.158 4.39 0.00 35.35 2.34
2494 2572 2.357056 CCCCACGGGCCATTGTAA 59.643 61.111 4.39 0.00 35.35 2.41
2495 2573 3.733972 CCCCCACGGGCCATTGTA 61.734 66.667 4.39 0.00 44.50 2.41
2505 2583 3.432051 GATCACGAGCTCCCCCACG 62.432 68.421 8.47 0.00 0.00 4.94
2506 2584 1.690219 ATGATCACGAGCTCCCCCAC 61.690 60.000 8.47 0.00 0.00 4.61
2507 2585 1.383109 ATGATCACGAGCTCCCCCA 60.383 57.895 8.47 0.00 0.00 4.96
2508 2586 1.369321 GATGATCACGAGCTCCCCC 59.631 63.158 8.47 0.00 0.00 5.40
2509 2587 1.006805 CGATGATCACGAGCTCCCC 60.007 63.158 8.47 0.00 0.00 4.81
2510 2588 0.385751 TTCGATGATCACGAGCTCCC 59.614 55.000 8.47 0.00 40.72 4.30
2511 2589 1.066303 ACTTCGATGATCACGAGCTCC 59.934 52.381 8.47 0.00 40.72 4.70
2512 2590 2.483583 ACTTCGATGATCACGAGCTC 57.516 50.000 16.18 2.73 40.72 4.09
2513 2591 4.083217 GGTATACTTCGATGATCACGAGCT 60.083 45.833 16.18 0.00 40.72 4.09
2514 2592 4.159857 GGTATACTTCGATGATCACGAGC 58.840 47.826 16.18 5.07 40.72 5.03
2515 2593 5.049336 AGTGGTATACTTCGATGATCACGAG 60.049 44.000 16.18 13.58 40.72 4.18
2516 2594 4.820173 AGTGGTATACTTCGATGATCACGA 59.180 41.667 13.87 13.87 35.67 4.35
2517 2595 4.912187 CAGTGGTATACTTCGATGATCACG 59.088 45.833 0.00 4.37 37.60 4.35
2518 2596 5.009710 TCCAGTGGTATACTTCGATGATCAC 59.990 44.000 9.54 0.00 37.60 3.06
2519 2597 5.137551 TCCAGTGGTATACTTCGATGATCA 58.862 41.667 9.54 0.00 37.60 2.92
2520 2598 5.336055 CCTCCAGTGGTATACTTCGATGATC 60.336 48.000 9.54 0.00 37.60 2.92
2521 2599 4.524714 CCTCCAGTGGTATACTTCGATGAT 59.475 45.833 9.54 0.00 37.60 2.45
2522 2600 3.889538 CCTCCAGTGGTATACTTCGATGA 59.110 47.826 9.54 0.00 37.60 2.92
2523 2601 3.889538 TCCTCCAGTGGTATACTTCGATG 59.110 47.826 9.54 0.00 37.60 3.84
2524 2602 4.180377 TCCTCCAGTGGTATACTTCGAT 57.820 45.455 9.54 0.00 37.60 3.59
2525 2603 3.657398 TCCTCCAGTGGTATACTTCGA 57.343 47.619 9.54 0.00 37.60 3.71
2526 2604 3.700038 AGTTCCTCCAGTGGTATACTTCG 59.300 47.826 9.54 0.00 37.60 3.79
2527 2605 4.957327 AGAGTTCCTCCAGTGGTATACTTC 59.043 45.833 9.54 2.50 37.60 3.01
2528 2606 4.949121 AGAGTTCCTCCAGTGGTATACTT 58.051 43.478 9.54 0.00 37.60 2.24
2529 2607 4.611564 AGAGTTCCTCCAGTGGTATACT 57.388 45.455 9.54 8.67 41.36 2.12
2530 2608 4.202030 CGAAGAGTTCCTCCAGTGGTATAC 60.202 50.000 9.54 3.90 0.00 1.47
2531 2609 3.952323 CGAAGAGTTCCTCCAGTGGTATA 59.048 47.826 9.54 0.00 0.00 1.47
2532 2610 2.761208 CGAAGAGTTCCTCCAGTGGTAT 59.239 50.000 9.54 0.00 0.00 2.73
2533 2611 2.168496 CGAAGAGTTCCTCCAGTGGTA 58.832 52.381 9.54 0.00 0.00 3.25
2534 2612 0.969894 CGAAGAGTTCCTCCAGTGGT 59.030 55.000 9.54 0.00 0.00 4.16
2535 2613 0.247736 CCGAAGAGTTCCTCCAGTGG 59.752 60.000 1.40 1.40 0.00 4.00
2536 2614 1.203523 CTCCGAAGAGTTCCTCCAGTG 59.796 57.143 0.00 0.00 35.21 3.66
2537 2615 1.551452 CTCCGAAGAGTTCCTCCAGT 58.449 55.000 0.00 0.00 35.21 4.00
2538 2616 0.174617 GCTCCGAAGAGTTCCTCCAG 59.825 60.000 0.00 0.00 42.59 3.86
2539 2617 0.251832 AGCTCCGAAGAGTTCCTCCA 60.252 55.000 0.00 0.00 42.59 3.86
2540 2618 1.679153 CTAGCTCCGAAGAGTTCCTCC 59.321 57.143 0.00 0.00 42.59 4.30
2541 2619 2.645802 TCTAGCTCCGAAGAGTTCCTC 58.354 52.381 0.00 0.00 42.59 3.71
2542 2620 2.810870 TCTAGCTCCGAAGAGTTCCT 57.189 50.000 0.00 0.00 42.59 3.36
2543 2621 2.100087 CCTTCTAGCTCCGAAGAGTTCC 59.900 54.545 21.13 0.00 42.59 3.62
2544 2622 3.018149 TCCTTCTAGCTCCGAAGAGTTC 58.982 50.000 21.13 0.00 42.59 3.01
2545 2623 3.020984 CTCCTTCTAGCTCCGAAGAGTT 58.979 50.000 21.13 0.00 42.59 3.01
2546 2624 2.650322 CTCCTTCTAGCTCCGAAGAGT 58.350 52.381 21.13 0.00 42.59 3.24
2547 2625 1.953686 CCTCCTTCTAGCTCCGAAGAG 59.046 57.143 21.13 16.37 40.15 2.85
2548 2626 1.410365 CCCTCCTTCTAGCTCCGAAGA 60.410 57.143 21.13 3.80 40.15 2.87
2549 2627 1.036707 CCCTCCTTCTAGCTCCGAAG 58.963 60.000 15.32 15.32 38.05 3.79
2550 2628 0.397254 CCCCTCCTTCTAGCTCCGAA 60.397 60.000 0.00 0.00 0.00 4.30
2551 2629 1.230497 CCCCTCCTTCTAGCTCCGA 59.770 63.158 0.00 0.00 0.00 4.55
2552 2630 1.834822 CCCCCTCCTTCTAGCTCCG 60.835 68.421 0.00 0.00 0.00 4.63
2553 2631 4.304432 CCCCCTCCTTCTAGCTCC 57.696 66.667 0.00 0.00 0.00 4.70
2582 2660 4.643387 ACGTTCTGGCCTGGGTGC 62.643 66.667 10.07 0.00 0.00 5.01
2583 2661 2.358737 GACGTTCTGGCCTGGGTG 60.359 66.667 10.07 2.36 0.00 4.61
2584 2662 2.224159 ATGACGTTCTGGCCTGGGT 61.224 57.895 10.07 5.76 0.00 4.51
2585 2663 1.746615 CATGACGTTCTGGCCTGGG 60.747 63.158 10.07 2.52 0.00 4.45
2586 2664 2.401766 GCATGACGTTCTGGCCTGG 61.402 63.158 10.07 0.00 0.00 4.45
2587 2665 2.401766 GGCATGACGTTCTGGCCTG 61.402 63.158 3.32 2.92 41.39 4.85
2588 2666 2.045926 GGCATGACGTTCTGGCCT 60.046 61.111 3.32 0.00 41.39 5.19
2589 2667 2.359850 TGGCATGACGTTCTGGCC 60.360 61.111 18.04 15.45 44.82 5.36
2590 2668 0.745845 ATCTGGCATGACGTTCTGGC 60.746 55.000 15.18 15.18 38.35 4.85
2591 2669 1.134580 AGATCTGGCATGACGTTCTGG 60.135 52.381 0.00 0.00 0.00 3.86
2592 2670 1.931841 CAGATCTGGCATGACGTTCTG 59.068 52.381 15.38 13.41 0.00 3.02
2593 2671 1.741732 GCAGATCTGGCATGACGTTCT 60.742 52.381 23.89 0.00 0.00 3.01
2594 2672 0.654683 GCAGATCTGGCATGACGTTC 59.345 55.000 23.89 0.00 0.00 3.95
2595 2673 2.772739 GCAGATCTGGCATGACGTT 58.227 52.632 23.89 0.00 0.00 3.99
2596 2674 4.528674 GCAGATCTGGCATGACGT 57.471 55.556 23.89 0.00 0.00 4.34
2604 2682 1.969923 CCCTTCTCTAGGCAGATCTGG 59.030 57.143 23.89 7.57 43.27 3.86
2605 2683 1.969923 CCCCTTCTCTAGGCAGATCTG 59.030 57.143 18.84 18.84 43.27 2.90
2606 2684 1.761009 GCCCCTTCTCTAGGCAGATCT 60.761 57.143 0.00 0.00 46.34 2.75
2607 2685 0.684535 GCCCCTTCTCTAGGCAGATC 59.315 60.000 0.00 0.00 46.34 2.75
2608 2686 2.847201 GCCCCTTCTCTAGGCAGAT 58.153 57.895 0.00 0.00 46.34 2.90
2609 2687 4.382852 GCCCCTTCTCTAGGCAGA 57.617 61.111 0.00 0.00 46.34 4.26
2612 2690 3.113514 GCCTGCCCCTTCTCTAGGC 62.114 68.421 0.00 0.00 46.04 3.93
2613 2691 2.801631 CGCCTGCCCCTTCTCTAGG 61.802 68.421 0.00 0.00 44.33 3.02
2614 2692 1.118356 ATCGCCTGCCCCTTCTCTAG 61.118 60.000 0.00 0.00 0.00 2.43
2615 2693 1.075226 ATCGCCTGCCCCTTCTCTA 60.075 57.895 0.00 0.00 0.00 2.43
2616 2694 2.366167 ATCGCCTGCCCCTTCTCT 60.366 61.111 0.00 0.00 0.00 3.10
2617 2695 2.049627 ATCATCGCCTGCCCCTTCTC 62.050 60.000 0.00 0.00 0.00 2.87
2618 2696 0.764369 TATCATCGCCTGCCCCTTCT 60.764 55.000 0.00 0.00 0.00 2.85
2619 2697 0.108585 TTATCATCGCCTGCCCCTTC 59.891 55.000 0.00 0.00 0.00 3.46
2620 2698 0.773644 ATTATCATCGCCTGCCCCTT 59.226 50.000 0.00 0.00 0.00 3.95
2621 2699 1.656587 TATTATCATCGCCTGCCCCT 58.343 50.000 0.00 0.00 0.00 4.79
2622 2700 2.292267 CATATTATCATCGCCTGCCCC 58.708 52.381 0.00 0.00 0.00 5.80
2623 2701 1.672881 GCATATTATCATCGCCTGCCC 59.327 52.381 0.00 0.00 0.00 5.36
2624 2702 2.353889 CAGCATATTATCATCGCCTGCC 59.646 50.000 0.00 0.00 0.00 4.85
2625 2703 2.223203 GCAGCATATTATCATCGCCTGC 60.223 50.000 0.00 0.00 0.00 4.85
2626 2704 3.004862 TGCAGCATATTATCATCGCCTG 58.995 45.455 0.00 0.00 0.00 4.85
2627 2705 3.339253 TGCAGCATATTATCATCGCCT 57.661 42.857 0.00 0.00 0.00 5.52
2628 2706 3.242969 CCATGCAGCATATTATCATCGCC 60.243 47.826 7.82 0.00 0.00 5.54
2629 2707 3.376234 ACCATGCAGCATATTATCATCGC 59.624 43.478 7.82 0.00 0.00 4.58
2630 2708 4.874396 AGACCATGCAGCATATTATCATCG 59.126 41.667 7.82 0.00 0.00 3.84
2631 2709 5.878669 TGAGACCATGCAGCATATTATCATC 59.121 40.000 7.82 1.33 0.00 2.92
2632 2710 5.812286 TGAGACCATGCAGCATATTATCAT 58.188 37.500 7.82 0.00 0.00 2.45
2633 2711 5.231702 TGAGACCATGCAGCATATTATCA 57.768 39.130 7.82 8.02 0.00 2.15
2634 2712 5.471116 TGTTGAGACCATGCAGCATATTATC 59.529 40.000 7.82 5.39 0.00 1.75
2635 2713 5.379187 TGTTGAGACCATGCAGCATATTAT 58.621 37.500 7.82 0.00 0.00 1.28
2636 2714 4.779696 TGTTGAGACCATGCAGCATATTA 58.220 39.130 7.82 0.00 0.00 0.98
2637 2715 3.623703 TGTTGAGACCATGCAGCATATT 58.376 40.909 7.82 0.00 0.00 1.28
2638 2716 3.211865 CTGTTGAGACCATGCAGCATAT 58.788 45.455 7.82 0.00 0.00 1.78
2639 2717 2.635714 CTGTTGAGACCATGCAGCATA 58.364 47.619 7.82 0.00 0.00 3.14
2640 2718 1.460504 CTGTTGAGACCATGCAGCAT 58.539 50.000 0.52 0.52 0.00 3.79
2641 2719 1.239296 GCTGTTGAGACCATGCAGCA 61.239 55.000 12.54 0.00 44.09 4.41
2642 2720 1.505353 GCTGTTGAGACCATGCAGC 59.495 57.895 3.92 3.92 41.11 5.25
2643 2721 0.322277 AGGCTGTTGAGACCATGCAG 60.322 55.000 0.00 0.00 0.00 4.41
2644 2722 0.607217 CAGGCTGTTGAGACCATGCA 60.607 55.000 6.28 0.00 0.00 3.96
2645 2723 0.321919 TCAGGCTGTTGAGACCATGC 60.322 55.000 15.27 0.00 0.00 4.06
2646 2724 2.286872 GATCAGGCTGTTGAGACCATG 58.713 52.381 15.27 0.00 0.00 3.66
2647 2725 1.134580 CGATCAGGCTGTTGAGACCAT 60.135 52.381 15.27 0.00 0.00 3.55
2648 2726 0.247460 CGATCAGGCTGTTGAGACCA 59.753 55.000 15.27 0.00 0.00 4.02
2649 2727 1.086634 GCGATCAGGCTGTTGAGACC 61.087 60.000 15.27 0.00 0.00 3.85
2650 2728 0.390340 TGCGATCAGGCTGTTGAGAC 60.390 55.000 15.27 1.50 0.00 3.36
2651 2729 0.321346 TTGCGATCAGGCTGTTGAGA 59.679 50.000 15.27 0.00 0.00 3.27
2652 2730 1.129998 CTTTGCGATCAGGCTGTTGAG 59.870 52.381 15.27 6.07 0.00 3.02
2653 2731 1.159285 CTTTGCGATCAGGCTGTTGA 58.841 50.000 15.27 0.00 0.00 3.18
2654 2732 1.159285 TCTTTGCGATCAGGCTGTTG 58.841 50.000 15.27 7.13 0.00 3.33
2655 2733 1.537202 GTTCTTTGCGATCAGGCTGTT 59.463 47.619 15.27 6.00 0.00 3.16
2656 2734 1.160137 GTTCTTTGCGATCAGGCTGT 58.840 50.000 15.27 1.47 0.00 4.40
2657 2735 0.095935 CGTTCTTTGCGATCAGGCTG 59.904 55.000 8.58 8.58 0.00 4.85
2658 2736 1.639298 GCGTTCTTTGCGATCAGGCT 61.639 55.000 0.00 0.00 0.00 4.58
2659 2737 1.226128 GCGTTCTTTGCGATCAGGC 60.226 57.895 0.00 0.00 0.00 4.85
2660 2738 0.729116 ATGCGTTCTTTGCGATCAGG 59.271 50.000 0.00 0.00 34.24 3.86
2661 2739 1.590679 CGATGCGTTCTTTGCGATCAG 60.591 52.381 0.00 0.00 34.24 2.90
2662 2740 0.369931 CGATGCGTTCTTTGCGATCA 59.630 50.000 0.00 0.00 34.24 2.92
2663 2741 0.315382 CCGATGCGTTCTTTGCGATC 60.315 55.000 0.00 0.00 34.24 3.69
2664 2742 1.019278 ACCGATGCGTTCTTTGCGAT 61.019 50.000 0.00 0.00 34.24 4.58
2665 2743 1.623081 GACCGATGCGTTCTTTGCGA 61.623 55.000 0.00 0.00 34.24 5.10
2666 2744 1.225745 GACCGATGCGTTCTTTGCG 60.226 57.895 0.00 0.00 34.24 4.85
2667 2745 1.225745 CGACCGATGCGTTCTTTGC 60.226 57.895 0.00 0.00 0.00 3.68
2668 2746 2.150424 ACGACCGATGCGTTCTTTG 58.850 52.632 0.00 0.00 39.18 2.77
2669 2747 4.667420 ACGACCGATGCGTTCTTT 57.333 50.000 0.00 0.00 39.18 2.52
2674 2752 3.411351 GCACAACGACCGATGCGT 61.411 61.111 0.00 0.00 44.94 5.24
2692 2770 4.754667 GGCCCGTCACGGTCTTCC 62.755 72.222 16.87 6.90 46.80 3.46
2693 2771 3.934391 CTGGCCCGTCACGGTCTTC 62.934 68.421 16.87 1.88 46.80 2.87
2694 2772 4.003788 CTGGCCCGTCACGGTCTT 62.004 66.667 16.87 0.00 46.80 3.01
2696 2774 4.736896 GACTGGCCCGTCACGGTC 62.737 72.222 21.23 0.39 46.80 4.79
2699 2777 2.738521 CAAGACTGGCCCGTCACG 60.739 66.667 26.72 14.45 36.38 4.35
2700 2778 3.050275 GCAAGACTGGCCCGTCAC 61.050 66.667 26.72 13.37 36.38 3.67
2701 2779 4.680237 CGCAAGACTGGCCCGTCA 62.680 66.667 26.72 0.00 43.02 4.35
2708 2786 2.743928 GGACTGCCGCAAGACTGG 60.744 66.667 0.00 0.00 43.02 4.00
2709 2787 2.031012 TGGACTGCCGCAAGACTG 59.969 61.111 0.00 0.00 43.02 3.51
2710 2788 2.345244 CTGGACTGCCGCAAGACT 59.655 61.111 0.00 0.00 43.02 3.24
2711 2789 3.426568 GCTGGACTGCCGCAAGAC 61.427 66.667 0.00 0.00 43.02 3.01
2712 2790 3.889134 CTGCTGGACTGCCGCAAGA 62.889 63.158 0.00 0.00 41.01 3.02
2713 2791 3.429141 CTGCTGGACTGCCGCAAG 61.429 66.667 0.00 0.00 41.01 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.