Multiple sequence alignment - TraesCS6D01G169800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G169800 chr6D 100.000 2994 0 0 1 2994 156439117 156436124 0.000000e+00 5529.0
1 TraesCS6D01G169800 chr6D 89.666 629 59 6 2369 2994 392191464 392190839 0.000000e+00 797.0
2 TraesCS6D01G169800 chr6D 96.682 422 14 0 95 516 46901119 46900698 0.000000e+00 702.0
3 TraesCS6D01G169800 chr6B 96.100 1718 44 13 582 2291 279033979 279032277 0.000000e+00 2780.0
4 TraesCS6D01G169800 chr6A 94.044 1679 49 23 582 2232 209843013 209841358 0.000000e+00 2499.0
5 TraesCS6D01G169800 chr6A 89.726 146 4 2 2224 2369 209840934 209840800 3.070000e-40 176.0
6 TraesCS6D01G169800 chr1D 90.880 625 54 3 2369 2993 364522361 364521740 0.000000e+00 835.0
7 TraesCS6D01G169800 chr1D 89.474 95 8 2 1 93 462271225 462271319 5.240000e-23 119.0
8 TraesCS6D01G169800 chr2D 90.394 635 60 1 2358 2992 159598784 159599417 0.000000e+00 833.0
9 TraesCS6D01G169800 chr2D 90.174 631 58 4 2365 2994 76869003 76869630 0.000000e+00 819.0
10 TraesCS6D01G169800 chr2D 88.748 631 64 5 2369 2994 6812375 6811747 0.000000e+00 765.0
11 TraesCS6D01G169800 chr2D 96.190 420 16 0 97 516 80252555 80252974 0.000000e+00 688.0
12 TraesCS6D01G169800 chr2D 95.283 424 19 1 93 516 47412492 47412914 0.000000e+00 671.0
13 TraesCS6D01G169800 chr2D 94.340 424 23 1 93 516 551933553 551933975 0.000000e+00 649.0
14 TraesCS6D01G169800 chr5D 90.620 629 56 3 2366 2993 518284564 518285190 0.000000e+00 832.0
15 TraesCS6D01G169800 chr5D 90.575 626 59 0 2369 2994 451629801 451629176 0.000000e+00 830.0
16 TraesCS6D01G169800 chr7A 89.155 627 63 4 2369 2994 110420992 110421614 0.000000e+00 776.0
17 TraesCS6D01G169800 chr7A 85.447 481 58 10 1520 1996 541454481 541454009 9.640000e-135 490.0
18 TraesCS6D01G169800 chr7A 81.027 448 73 8 995 1433 541455049 541454605 2.210000e-91 346.0
19 TraesCS6D01G169800 chr3D 88.924 632 63 5 2367 2994 98568718 98568090 0.000000e+00 773.0
20 TraesCS6D01G169800 chr3D 94.104 424 24 1 93 516 123489550 123489972 0.000000e+00 643.0
21 TraesCS6D01G169800 chr4D 97.877 424 9 0 93 516 251555244 251555667 0.000000e+00 734.0
22 TraesCS6D01G169800 chr4D 94.614 427 23 0 90 516 217328692 217328266 0.000000e+00 662.0
23 TraesCS6D01G169800 chr4D 93.647 425 26 1 93 516 428537365 428537789 4.210000e-178 634.0
24 TraesCS6D01G169800 chr4D 93.176 425 28 1 93 516 436929145 436929569 9.110000e-175 623.0
25 TraesCS6D01G169800 chr4D 91.111 90 7 1 5 93 44194405 44194316 1.460000e-23 121.0
26 TraesCS6D01G169800 chr7B 84.569 499 65 10 1502 1996 480276710 480277200 4.490000e-133 484.0
27 TraesCS6D01G169800 chr7B 80.804 448 74 6 995 1433 480276164 480276608 1.030000e-89 340.0
28 TraesCS6D01G169800 chr7B 87.912 91 9 2 2 90 599800471 599800561 4.080000e-19 106.0
29 TraesCS6D01G169800 chr7D 83.968 499 68 10 1502 1996 458521500 458521990 4.520000e-128 468.0
30 TraesCS6D01G169800 chr7D 87.368 95 10 2 1 93 585671442 585671348 1.130000e-19 108.0
31 TraesCS6D01G169800 chr1B 90.526 95 7 2 1 93 562435125 562435031 1.130000e-24 124.0
32 TraesCS6D01G169800 chr1A 90.805 87 7 1 5 90 351472142 351472228 6.780000e-22 115.0
33 TraesCS6D01G169800 chr2B 88.636 88 9 1 7 93 216932425 216932338 4.080000e-19 106.0
34 TraesCS6D01G169800 chr5B 86.316 95 11 2 1 93 608192652 608192558 5.280000e-18 102.0
35 TraesCS6D01G169800 chr3B 85.417 96 10 3 1 93 29790524 29790430 2.460000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G169800 chr6D 156436124 156439117 2993 True 5529.0 5529 100.0000 1 2994 1 chr6D.!!$R2 2993
1 TraesCS6D01G169800 chr6D 392190839 392191464 625 True 797.0 797 89.6660 2369 2994 1 chr6D.!!$R3 625
2 TraesCS6D01G169800 chr6B 279032277 279033979 1702 True 2780.0 2780 96.1000 582 2291 1 chr6B.!!$R1 1709
3 TraesCS6D01G169800 chr6A 209840800 209843013 2213 True 1337.5 2499 91.8850 582 2369 2 chr6A.!!$R1 1787
4 TraesCS6D01G169800 chr1D 364521740 364522361 621 True 835.0 835 90.8800 2369 2993 1 chr1D.!!$R1 624
5 TraesCS6D01G169800 chr2D 159598784 159599417 633 False 833.0 833 90.3940 2358 2992 1 chr2D.!!$F4 634
6 TraesCS6D01G169800 chr2D 76869003 76869630 627 False 819.0 819 90.1740 2365 2994 1 chr2D.!!$F2 629
7 TraesCS6D01G169800 chr2D 6811747 6812375 628 True 765.0 765 88.7480 2369 2994 1 chr2D.!!$R1 625
8 TraesCS6D01G169800 chr5D 518284564 518285190 626 False 832.0 832 90.6200 2366 2993 1 chr5D.!!$F1 627
9 TraesCS6D01G169800 chr5D 451629176 451629801 625 True 830.0 830 90.5750 2369 2994 1 chr5D.!!$R1 625
10 TraesCS6D01G169800 chr7A 110420992 110421614 622 False 776.0 776 89.1550 2369 2994 1 chr7A.!!$F1 625
11 TraesCS6D01G169800 chr7A 541454009 541455049 1040 True 418.0 490 83.2370 995 1996 2 chr7A.!!$R1 1001
12 TraesCS6D01G169800 chr3D 98568090 98568718 628 True 773.0 773 88.9240 2367 2994 1 chr3D.!!$R1 627
13 TraesCS6D01G169800 chr7B 480276164 480277200 1036 False 412.0 484 82.6865 995 1996 2 chr7B.!!$F2 1001

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.032952 AGTTTAGCGCGTCTGTTGGA 59.967 50.0 8.43 0.0 0.00 3.53 F
510 511 0.036294 AAGGGAGCAAAGTAGCGTCC 60.036 55.0 0.00 0.0 40.15 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1478 1505 0.394488 CTCTCCGGTCAGGTAGCTGA 60.394 60.0 20.43 20.43 41.99 4.26 R
2405 2910 0.179084 CCGGCGGTCACATAATCACT 60.179 55.0 19.97 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.505217 CGCGGCTGCAGTTTAGCG 62.505 66.667 23.84 23.84 42.03 4.26
18 19 4.818835 GCGGCTGCAGTTTAGCGC 62.819 66.667 16.64 0.00 42.03 5.92
19 20 4.505217 CGGCTGCAGTTTAGCGCG 62.505 66.667 16.64 0.00 42.03 6.86
20 21 3.423154 GGCTGCAGTTTAGCGCGT 61.423 61.111 16.64 0.00 42.03 6.01
21 22 2.096594 GCTGCAGTTTAGCGCGTC 59.903 61.111 16.64 0.00 37.31 5.19
22 23 2.383527 GCTGCAGTTTAGCGCGTCT 61.384 57.895 16.64 8.22 37.31 4.18
23 24 1.417592 CTGCAGTTTAGCGCGTCTG 59.582 57.895 8.43 10.51 37.31 3.51
24 25 1.284982 CTGCAGTTTAGCGCGTCTGT 61.285 55.000 8.43 0.00 37.31 3.41
25 26 0.878523 TGCAGTTTAGCGCGTCTGTT 60.879 50.000 8.43 0.00 37.31 3.16
26 27 0.451135 GCAGTTTAGCGCGTCTGTTG 60.451 55.000 8.43 9.99 0.00 3.33
27 28 0.163788 CAGTTTAGCGCGTCTGTTGG 59.836 55.000 8.43 0.00 0.00 3.77
28 29 0.032952 AGTTTAGCGCGTCTGTTGGA 59.967 50.000 8.43 0.00 0.00 3.53
29 30 0.438830 GTTTAGCGCGTCTGTTGGAG 59.561 55.000 8.43 0.00 0.00 3.86
30 31 1.289109 TTTAGCGCGTCTGTTGGAGC 61.289 55.000 8.43 0.00 0.00 4.70
35 36 2.811317 CGTCTGTTGGAGCGGCTC 60.811 66.667 21.57 21.57 0.00 4.70
36 37 2.343758 GTCTGTTGGAGCGGCTCA 59.656 61.111 29.33 14.13 31.08 4.26
37 38 1.739562 GTCTGTTGGAGCGGCTCAG 60.740 63.158 29.33 19.05 31.08 3.35
38 39 1.908299 TCTGTTGGAGCGGCTCAGA 60.908 57.895 29.33 20.90 33.60 3.27
39 40 1.739562 CTGTTGGAGCGGCTCAGAC 60.740 63.158 29.33 24.66 31.08 3.51
40 41 2.811317 GTTGGAGCGGCTCAGACG 60.811 66.667 29.33 0.00 36.98 4.18
47 48 2.637589 CGGCTCAGACGCGCTATA 59.362 61.111 5.73 0.00 0.00 1.31
48 49 1.008881 CGGCTCAGACGCGCTATAA 60.009 57.895 5.73 0.00 0.00 0.98
49 50 0.387367 CGGCTCAGACGCGCTATAAT 60.387 55.000 5.73 0.00 0.00 1.28
50 51 1.784525 GGCTCAGACGCGCTATAATT 58.215 50.000 5.73 0.00 0.00 1.40
51 52 2.135933 GGCTCAGACGCGCTATAATTT 58.864 47.619 5.73 0.00 0.00 1.82
52 53 2.096713 GGCTCAGACGCGCTATAATTTG 60.097 50.000 5.73 0.00 0.00 2.32
53 54 2.660362 GCTCAGACGCGCTATAATTTGC 60.660 50.000 5.73 0.00 0.00 3.68
54 55 2.539688 CTCAGACGCGCTATAATTTGCA 59.460 45.455 5.73 0.00 0.00 4.08
55 56 2.539688 TCAGACGCGCTATAATTTGCAG 59.460 45.455 5.73 0.00 0.00 4.41
56 57 1.261619 AGACGCGCTATAATTTGCAGC 59.738 47.619 5.73 0.00 0.00 5.25
60 61 3.479255 GCTATAATTTGCAGCGGCC 57.521 52.632 6.32 0.00 40.13 6.13
61 62 0.385974 GCTATAATTTGCAGCGGCCG 60.386 55.000 24.05 24.05 40.13 6.13
62 63 0.385974 CTATAATTTGCAGCGGCCGC 60.386 55.000 42.34 42.34 40.13 6.53
90 91 4.020378 GCTCCCGTCGCGCAAAAA 62.020 61.111 8.75 0.00 0.00 1.94
91 92 2.127383 CTCCCGTCGCGCAAAAAC 60.127 61.111 8.75 0.00 0.00 2.43
92 93 2.589442 TCCCGTCGCGCAAAAACT 60.589 55.556 8.75 0.00 0.00 2.66
93 94 2.113131 CTCCCGTCGCGCAAAAACTT 62.113 55.000 8.75 0.00 0.00 2.66
94 95 1.298788 CCCGTCGCGCAAAAACTTT 60.299 52.632 8.75 0.00 0.00 2.66
95 96 0.868177 CCCGTCGCGCAAAAACTTTT 60.868 50.000 8.75 0.00 0.00 2.27
96 97 0.917939 CCGTCGCGCAAAAACTTTTT 59.082 45.000 8.75 0.00 0.00 1.94
116 117 5.873179 TTTTGGAACATAAACGCTAGGAG 57.127 39.130 0.00 0.00 39.30 3.69
117 118 2.901249 TGGAACATAAACGCTAGGAGC 58.099 47.619 0.00 0.00 38.02 4.70
139 140 6.727569 GCGTCCGGCTTTAAATTAATAAAG 57.272 37.500 0.00 6.41 42.93 1.85
157 158 4.489771 CCACCAGGCGGGATCCAC 62.490 72.222 15.23 4.61 41.15 4.02
158 159 3.716195 CACCAGGCGGGATCCACA 61.716 66.667 15.23 0.00 41.15 4.17
159 160 3.717294 ACCAGGCGGGATCCACAC 61.717 66.667 15.23 2.14 41.15 3.82
160 161 3.716195 CCAGGCGGGATCCACACA 61.716 66.667 15.23 0.00 40.01 3.72
161 162 2.350895 CAGGCGGGATCCACACAA 59.649 61.111 15.23 0.00 0.00 3.33
162 163 1.303236 CAGGCGGGATCCACACAAA 60.303 57.895 15.23 0.00 0.00 2.83
163 164 0.680921 CAGGCGGGATCCACACAAAT 60.681 55.000 15.23 0.00 0.00 2.32
164 165 0.039618 AGGCGGGATCCACACAAATT 59.960 50.000 15.23 0.00 0.00 1.82
165 166 1.283613 AGGCGGGATCCACACAAATTA 59.716 47.619 15.23 0.00 0.00 1.40
166 167 2.096248 GGCGGGATCCACACAAATTAA 58.904 47.619 15.23 0.00 0.00 1.40
167 168 2.099098 GGCGGGATCCACACAAATTAAG 59.901 50.000 15.23 0.00 0.00 1.85
168 169 2.479560 GCGGGATCCACACAAATTAAGC 60.480 50.000 15.23 0.00 0.00 3.09
169 170 2.099098 CGGGATCCACACAAATTAAGCC 59.901 50.000 15.23 0.00 0.00 4.35
170 171 3.365472 GGGATCCACACAAATTAAGCCT 58.635 45.455 15.23 0.00 0.00 4.58
171 172 3.769300 GGGATCCACACAAATTAAGCCTT 59.231 43.478 15.23 0.00 0.00 4.35
172 173 4.953579 GGGATCCACACAAATTAAGCCTTA 59.046 41.667 15.23 0.00 0.00 2.69
173 174 5.163550 GGGATCCACACAAATTAAGCCTTAC 60.164 44.000 15.23 0.00 0.00 2.34
174 175 5.417580 GGATCCACACAAATTAAGCCTTACA 59.582 40.000 6.95 0.00 0.00 2.41
175 176 6.071616 GGATCCACACAAATTAAGCCTTACAA 60.072 38.462 6.95 0.00 0.00 2.41
176 177 6.716934 TCCACACAAATTAAGCCTTACAAA 57.283 33.333 0.00 0.00 0.00 2.83
177 178 6.508777 TCCACACAAATTAAGCCTTACAAAC 58.491 36.000 0.00 0.00 0.00 2.93
178 179 5.694458 CCACACAAATTAAGCCTTACAAACC 59.306 40.000 0.00 0.00 0.00 3.27
179 180 5.401079 CACACAAATTAAGCCTTACAAACCG 59.599 40.000 0.00 0.00 0.00 4.44
180 181 5.299782 ACACAAATTAAGCCTTACAAACCGA 59.700 36.000 0.00 0.00 0.00 4.69
181 182 6.183360 ACACAAATTAAGCCTTACAAACCGAA 60.183 34.615 0.00 0.00 0.00 4.30
182 183 6.866248 CACAAATTAAGCCTTACAAACCGAAT 59.134 34.615 0.00 0.00 0.00 3.34
183 184 8.024285 CACAAATTAAGCCTTACAAACCGAATA 58.976 33.333 0.00 0.00 0.00 1.75
184 185 8.578151 ACAAATTAAGCCTTACAAACCGAATAA 58.422 29.630 0.00 0.00 0.00 1.40
185 186 9.413048 CAAATTAAGCCTTACAAACCGAATAAA 57.587 29.630 0.00 0.00 0.00 1.40
186 187 9.984190 AAATTAAGCCTTACAAACCGAATAAAA 57.016 25.926 0.00 0.00 0.00 1.52
187 188 8.975410 ATTAAGCCTTACAAACCGAATAAAAC 57.025 30.769 0.00 0.00 0.00 2.43
188 189 6.394025 AAGCCTTACAAACCGAATAAAACA 57.606 33.333 0.00 0.00 0.00 2.83
189 190 6.009115 AGCCTTACAAACCGAATAAAACAG 57.991 37.500 0.00 0.00 0.00 3.16
190 191 5.533528 AGCCTTACAAACCGAATAAAACAGT 59.466 36.000 0.00 0.00 0.00 3.55
191 192 5.854866 GCCTTACAAACCGAATAAAACAGTC 59.145 40.000 0.00 0.00 0.00 3.51
192 193 6.513720 GCCTTACAAACCGAATAAAACAGTCA 60.514 38.462 0.00 0.00 0.00 3.41
193 194 7.590279 CCTTACAAACCGAATAAAACAGTCAT 58.410 34.615 0.00 0.00 0.00 3.06
194 195 7.749126 CCTTACAAACCGAATAAAACAGTCATC 59.251 37.037 0.00 0.00 0.00 2.92
195 196 6.627395 ACAAACCGAATAAAACAGTCATCA 57.373 33.333 0.00 0.00 0.00 3.07
196 197 7.033530 ACAAACCGAATAAAACAGTCATCAA 57.966 32.000 0.00 0.00 0.00 2.57
197 198 7.138736 ACAAACCGAATAAAACAGTCATCAAG 58.861 34.615 0.00 0.00 0.00 3.02
198 199 5.296813 ACCGAATAAAACAGTCATCAAGC 57.703 39.130 0.00 0.00 0.00 4.01
199 200 4.156008 ACCGAATAAAACAGTCATCAAGCC 59.844 41.667 0.00 0.00 0.00 4.35
200 201 4.438744 CCGAATAAAACAGTCATCAAGCCC 60.439 45.833 0.00 0.00 0.00 5.19
201 202 4.155826 CGAATAAAACAGTCATCAAGCCCA 59.844 41.667 0.00 0.00 0.00 5.36
202 203 5.391312 AATAAAACAGTCATCAAGCCCAC 57.609 39.130 0.00 0.00 0.00 4.61
203 204 1.238439 AAACAGTCATCAAGCCCACG 58.762 50.000 0.00 0.00 0.00 4.94
204 205 0.606401 AACAGTCATCAAGCCCACGG 60.606 55.000 0.00 0.00 0.00 4.94
214 215 2.908015 GCCCACGGCTCAGGATAA 59.092 61.111 0.00 0.00 46.69 1.75
215 216 1.223487 GCCCACGGCTCAGGATAAA 59.777 57.895 0.00 0.00 46.69 1.40
216 217 0.815615 GCCCACGGCTCAGGATAAAG 60.816 60.000 0.00 0.00 46.69 1.85
217 218 0.815615 CCCACGGCTCAGGATAAAGC 60.816 60.000 0.00 0.00 37.80 3.51
218 219 0.179000 CCACGGCTCAGGATAAAGCT 59.821 55.000 0.00 0.00 38.58 3.74
219 220 1.412710 CCACGGCTCAGGATAAAGCTA 59.587 52.381 0.00 0.00 38.58 3.32
220 221 2.158957 CCACGGCTCAGGATAAAGCTAA 60.159 50.000 0.00 0.00 38.58 3.09
221 222 3.126831 CACGGCTCAGGATAAAGCTAAG 58.873 50.000 0.00 0.00 38.58 2.18
222 223 3.031736 ACGGCTCAGGATAAAGCTAAGA 58.968 45.455 0.00 0.00 38.58 2.10
223 224 3.451178 ACGGCTCAGGATAAAGCTAAGAA 59.549 43.478 0.00 0.00 38.58 2.52
224 225 4.054671 CGGCTCAGGATAAAGCTAAGAAG 58.945 47.826 0.00 0.00 38.58 2.85
225 226 4.384940 GGCTCAGGATAAAGCTAAGAAGG 58.615 47.826 0.00 0.00 38.58 3.46
226 227 4.141597 GGCTCAGGATAAAGCTAAGAAGGT 60.142 45.833 0.00 0.00 38.58 3.50
227 228 5.053811 GCTCAGGATAAAGCTAAGAAGGTC 58.946 45.833 0.00 0.00 35.60 3.85
228 229 5.395768 GCTCAGGATAAAGCTAAGAAGGTCA 60.396 44.000 0.00 0.00 35.60 4.02
229 230 5.978814 TCAGGATAAAGCTAAGAAGGTCAC 58.021 41.667 0.00 0.00 31.54 3.67
230 231 5.483937 TCAGGATAAAGCTAAGAAGGTCACA 59.516 40.000 0.00 0.00 31.54 3.58
231 232 5.814705 CAGGATAAAGCTAAGAAGGTCACAG 59.185 44.000 0.00 0.00 31.54 3.66
232 233 4.572795 GGATAAAGCTAAGAAGGTCACAGC 59.427 45.833 0.00 0.00 31.54 4.40
233 234 2.481289 AAGCTAAGAAGGTCACAGCC 57.519 50.000 0.00 0.00 32.58 4.85
234 235 1.352083 AGCTAAGAAGGTCACAGCCA 58.648 50.000 0.00 0.00 32.58 4.75
235 236 1.002544 AGCTAAGAAGGTCACAGCCAC 59.997 52.381 0.00 0.00 32.58 5.01
236 237 1.270839 GCTAAGAAGGTCACAGCCACA 60.271 52.381 0.00 0.00 0.00 4.17
237 238 2.810400 GCTAAGAAGGTCACAGCCACAA 60.810 50.000 0.00 0.00 0.00 3.33
238 239 1.972872 AAGAAGGTCACAGCCACAAG 58.027 50.000 0.00 0.00 0.00 3.16
239 240 0.839946 AGAAGGTCACAGCCACAAGT 59.160 50.000 0.00 0.00 0.00 3.16
240 241 1.212935 AGAAGGTCACAGCCACAAGTT 59.787 47.619 0.00 0.00 0.00 2.66
241 242 1.604278 GAAGGTCACAGCCACAAGTTC 59.396 52.381 0.00 0.00 0.00 3.01
242 243 0.546122 AGGTCACAGCCACAAGTTCA 59.454 50.000 0.00 0.00 0.00 3.18
243 244 1.064758 AGGTCACAGCCACAAGTTCAA 60.065 47.619 0.00 0.00 0.00 2.69
244 245 1.956477 GGTCACAGCCACAAGTTCAAT 59.044 47.619 0.00 0.00 0.00 2.57
245 246 3.146066 GGTCACAGCCACAAGTTCAATA 58.854 45.455 0.00 0.00 0.00 1.90
246 247 3.189287 GGTCACAGCCACAAGTTCAATAG 59.811 47.826 0.00 0.00 0.00 1.73
247 248 2.813754 TCACAGCCACAAGTTCAATAGC 59.186 45.455 0.00 0.00 0.00 2.97
248 249 1.806542 ACAGCCACAAGTTCAATAGCG 59.193 47.619 0.00 0.00 0.00 4.26
249 250 0.804989 AGCCACAAGTTCAATAGCGC 59.195 50.000 0.00 0.00 0.00 5.92
250 251 0.521291 GCCACAAGTTCAATAGCGCA 59.479 50.000 11.47 0.00 0.00 6.09
251 252 1.068610 GCCACAAGTTCAATAGCGCAA 60.069 47.619 11.47 0.00 0.00 4.85
252 253 2.606795 GCCACAAGTTCAATAGCGCAAA 60.607 45.455 11.47 0.00 0.00 3.68
253 254 3.637432 CCACAAGTTCAATAGCGCAAAA 58.363 40.909 11.47 0.00 0.00 2.44
254 255 3.670055 CCACAAGTTCAATAGCGCAAAAG 59.330 43.478 11.47 0.00 0.00 2.27
255 256 3.120121 CACAAGTTCAATAGCGCAAAAGC 59.880 43.478 11.47 0.00 37.41 3.51
256 257 2.247311 AGTTCAATAGCGCAAAAGCG 57.753 45.000 11.47 5.38 43.00 4.68
257 258 1.135689 AGTTCAATAGCGCAAAAGCGG 60.136 47.619 11.47 0.00 43.00 5.52
258 259 1.135803 GTTCAATAGCGCAAAAGCGGA 60.136 47.619 11.47 0.00 43.00 5.54
259 260 0.726827 TCAATAGCGCAAAAGCGGAG 59.273 50.000 11.47 0.00 43.00 4.63
273 274 3.761481 CGGAGCAGCAAGACAAAAG 57.239 52.632 0.00 0.00 0.00 2.27
274 275 0.386478 CGGAGCAGCAAGACAAAAGC 60.386 55.000 0.00 0.00 0.00 3.51
275 276 0.957362 GGAGCAGCAAGACAAAAGCT 59.043 50.000 0.00 0.00 39.63 3.74
276 277 2.154462 GGAGCAGCAAGACAAAAGCTA 58.846 47.619 0.00 0.00 36.73 3.32
277 278 2.161211 GGAGCAGCAAGACAAAAGCTAG 59.839 50.000 0.00 0.00 36.73 3.42
278 279 1.538950 AGCAGCAAGACAAAAGCTAGC 59.461 47.619 6.62 6.62 36.73 3.42
279 280 1.538950 GCAGCAAGACAAAAGCTAGCT 59.461 47.619 12.68 12.68 36.73 3.32
280 281 2.744202 GCAGCAAGACAAAAGCTAGCTA 59.256 45.455 19.70 0.00 36.73 3.32
281 282 3.189287 GCAGCAAGACAAAAGCTAGCTAA 59.811 43.478 19.70 0.00 36.73 3.09
282 283 4.320494 GCAGCAAGACAAAAGCTAGCTAAA 60.320 41.667 19.70 0.00 36.73 1.85
283 284 5.762045 CAGCAAGACAAAAGCTAGCTAAAA 58.238 37.500 19.70 0.00 36.73 1.52
284 285 5.855395 CAGCAAGACAAAAGCTAGCTAAAAG 59.145 40.000 19.70 10.99 36.73 2.27
285 286 5.532779 AGCAAGACAAAAGCTAGCTAAAAGT 59.467 36.000 19.70 14.21 36.73 2.66
286 287 6.710744 AGCAAGACAAAAGCTAGCTAAAAGTA 59.289 34.615 19.70 0.00 36.73 2.24
287 288 7.018235 GCAAGACAAAAGCTAGCTAAAAGTAG 58.982 38.462 19.70 6.41 0.00 2.57
288 289 7.095187 GCAAGACAAAAGCTAGCTAAAAGTAGA 60.095 37.037 19.70 0.00 0.00 2.59
289 290 8.439286 CAAGACAAAAGCTAGCTAAAAGTAGAG 58.561 37.037 19.70 0.70 0.00 2.43
290 291 7.100409 AGACAAAAGCTAGCTAAAAGTAGAGG 58.900 38.462 19.70 1.69 0.00 3.69
291 292 6.770542 ACAAAAGCTAGCTAAAAGTAGAGGT 58.229 36.000 19.70 2.30 0.00 3.85
292 293 6.874664 ACAAAAGCTAGCTAAAAGTAGAGGTC 59.125 38.462 19.70 0.00 0.00 3.85
293 294 6.860790 AAAGCTAGCTAAAAGTAGAGGTCT 57.139 37.500 19.70 0.00 0.00 3.85
294 295 6.459670 AAGCTAGCTAAAAGTAGAGGTCTC 57.540 41.667 19.70 0.00 0.00 3.36
295 296 5.511363 AGCTAGCTAAAAGTAGAGGTCTCA 58.489 41.667 17.69 0.00 0.00 3.27
296 297 6.133356 AGCTAGCTAAAAGTAGAGGTCTCAT 58.867 40.000 17.69 0.00 0.00 2.90
297 298 6.040391 AGCTAGCTAAAAGTAGAGGTCTCATG 59.960 42.308 17.69 0.00 0.00 3.07
298 299 6.039941 GCTAGCTAAAAGTAGAGGTCTCATGA 59.960 42.308 7.70 0.00 0.00 3.07
299 300 7.255801 GCTAGCTAAAAGTAGAGGTCTCATGAT 60.256 40.741 7.70 0.00 0.00 2.45
300 301 7.049799 AGCTAAAAGTAGAGGTCTCATGATC 57.950 40.000 0.00 0.00 0.00 2.92
301 302 6.609212 AGCTAAAAGTAGAGGTCTCATGATCA 59.391 38.462 0.00 0.00 0.00 2.92
302 303 7.124901 AGCTAAAAGTAGAGGTCTCATGATCAA 59.875 37.037 0.00 0.00 0.00 2.57
303 304 7.437862 GCTAAAAGTAGAGGTCTCATGATCAAG 59.562 40.741 0.00 0.00 0.00 3.02
304 305 4.935352 AGTAGAGGTCTCATGATCAAGC 57.065 45.455 0.00 0.00 0.00 4.01
305 306 3.640967 AGTAGAGGTCTCATGATCAAGCC 59.359 47.826 0.00 0.00 0.00 4.35
306 307 1.411977 AGAGGTCTCATGATCAAGCCG 59.588 52.381 0.00 0.00 0.00 5.52
307 308 1.137872 GAGGTCTCATGATCAAGCCGT 59.862 52.381 0.00 0.00 0.00 5.68
308 309 1.137872 AGGTCTCATGATCAAGCCGTC 59.862 52.381 0.00 0.00 0.00 4.79
309 310 1.134699 GGTCTCATGATCAAGCCGTCA 60.135 52.381 0.00 0.00 0.00 4.35
310 311 2.484417 GGTCTCATGATCAAGCCGTCAT 60.484 50.000 0.00 0.00 35.54 3.06
311 312 2.799412 GTCTCATGATCAAGCCGTCATC 59.201 50.000 0.00 0.00 32.98 2.92
312 313 2.141517 CTCATGATCAAGCCGTCATCC 58.858 52.381 0.00 0.00 32.98 3.51
313 314 1.202687 TCATGATCAAGCCGTCATCCC 60.203 52.381 0.00 0.00 32.98 3.85
314 315 1.135094 ATGATCAAGCCGTCATCCCT 58.865 50.000 0.00 0.00 29.36 4.20
315 316 0.911769 TGATCAAGCCGTCATCCCTT 59.088 50.000 0.00 0.00 0.00 3.95
316 317 1.303309 GATCAAGCCGTCATCCCTTG 58.697 55.000 0.00 0.00 37.80 3.61
317 318 0.620556 ATCAAGCCGTCATCCCTTGT 59.379 50.000 0.00 0.00 37.72 3.16
318 319 0.036388 TCAAGCCGTCATCCCTTGTC 60.036 55.000 0.00 0.00 37.72 3.18
319 320 1.079127 AAGCCGTCATCCCTTGTCG 60.079 57.895 0.00 0.00 36.76 4.35
320 321 1.827399 AAGCCGTCATCCCTTGTCGT 61.827 55.000 0.00 0.00 35.49 4.34
321 322 2.100631 GCCGTCATCCCTTGTCGTG 61.101 63.158 0.00 0.00 35.49 4.35
322 323 2.100631 CCGTCATCCCTTGTCGTGC 61.101 63.158 0.00 0.00 35.49 5.34
323 324 2.100631 CGTCATCCCTTGTCGTGCC 61.101 63.158 0.00 0.00 33.11 5.01
324 325 1.296715 GTCATCCCTTGTCGTGCCT 59.703 57.895 0.00 0.00 0.00 4.75
325 326 0.321653 GTCATCCCTTGTCGTGCCTT 60.322 55.000 0.00 0.00 0.00 4.35
326 327 0.036388 TCATCCCTTGTCGTGCCTTC 60.036 55.000 0.00 0.00 0.00 3.46
327 328 0.321564 CATCCCTTGTCGTGCCTTCA 60.322 55.000 0.00 0.00 0.00 3.02
328 329 0.321653 ATCCCTTGTCGTGCCTTCAC 60.322 55.000 0.00 0.00 39.78 3.18
329 330 1.966451 CCCTTGTCGTGCCTTCACC 60.966 63.158 0.00 0.00 40.04 4.02
330 331 1.227823 CCTTGTCGTGCCTTCACCA 60.228 57.895 0.00 0.00 40.04 4.17
331 332 0.606401 CCTTGTCGTGCCTTCACCAT 60.606 55.000 0.00 0.00 40.04 3.55
332 333 0.518636 CTTGTCGTGCCTTCACCATG 59.481 55.000 0.00 0.00 40.04 3.66
333 334 0.888736 TTGTCGTGCCTTCACCATGG 60.889 55.000 11.19 11.19 40.04 3.66
334 335 1.302511 GTCGTGCCTTCACCATGGT 60.303 57.895 13.00 13.00 40.04 3.55
335 336 1.003839 TCGTGCCTTCACCATGGTC 60.004 57.895 16.53 3.66 40.04 4.02
336 337 2.390599 CGTGCCTTCACCATGGTCG 61.391 63.158 16.53 10.12 40.04 4.79
337 338 1.302511 GTGCCTTCACCATGGTCGT 60.303 57.895 16.53 0.00 37.24 4.34
338 339 1.003839 TGCCTTCACCATGGTCGTC 60.004 57.895 16.53 3.33 0.00 4.20
339 340 1.296715 GCCTTCACCATGGTCGTCT 59.703 57.895 16.53 0.00 0.00 4.18
340 341 0.321653 GCCTTCACCATGGTCGTCTT 60.322 55.000 16.53 0.00 0.00 3.01
341 342 1.442769 CCTTCACCATGGTCGTCTTG 58.557 55.000 16.53 2.42 0.00 3.02
342 343 1.001974 CCTTCACCATGGTCGTCTTGA 59.998 52.381 16.53 5.26 0.00 3.02
343 344 2.355108 CCTTCACCATGGTCGTCTTGAT 60.355 50.000 16.53 0.00 0.00 2.57
344 345 2.672961 TCACCATGGTCGTCTTGATC 57.327 50.000 16.53 0.00 0.00 2.92
345 346 1.899142 TCACCATGGTCGTCTTGATCA 59.101 47.619 16.53 0.00 43.27 2.92
346 347 2.094026 TCACCATGGTCGTCTTGATCAG 60.094 50.000 16.53 0.00 42.12 2.90
347 348 1.293924 CCATGGTCGTCTTGATCAGC 58.706 55.000 2.57 0.00 42.12 4.26
348 349 1.134580 CCATGGTCGTCTTGATCAGCT 60.135 52.381 2.57 0.00 42.12 4.24
349 350 2.200067 CATGGTCGTCTTGATCAGCTC 58.800 52.381 0.00 0.00 42.12 4.09
350 351 0.532573 TGGTCGTCTTGATCAGCTCC 59.467 55.000 0.00 0.00 31.00 4.70
351 352 0.532573 GGTCGTCTTGATCAGCTCCA 59.467 55.000 0.00 0.00 0.00 3.86
352 353 1.137872 GGTCGTCTTGATCAGCTCCAT 59.862 52.381 0.00 0.00 0.00 3.41
353 354 2.362397 GGTCGTCTTGATCAGCTCCATA 59.638 50.000 0.00 0.00 0.00 2.74
354 355 3.551863 GGTCGTCTTGATCAGCTCCATAG 60.552 52.174 0.00 0.00 0.00 2.23
355 356 3.067461 GTCGTCTTGATCAGCTCCATAGT 59.933 47.826 0.00 0.00 0.00 2.12
356 357 3.316588 TCGTCTTGATCAGCTCCATAGTC 59.683 47.826 0.00 0.00 0.00 2.59
357 358 3.317711 CGTCTTGATCAGCTCCATAGTCT 59.682 47.826 0.00 0.00 0.00 3.24
358 359 4.556501 CGTCTTGATCAGCTCCATAGTCTC 60.557 50.000 0.00 0.00 0.00 3.36
359 360 3.567585 TCTTGATCAGCTCCATAGTCTCG 59.432 47.826 0.00 0.00 0.00 4.04
360 361 2.937519 TGATCAGCTCCATAGTCTCGT 58.062 47.619 0.00 0.00 0.00 4.18
361 362 3.291584 TGATCAGCTCCATAGTCTCGTT 58.708 45.455 0.00 0.00 0.00 3.85
362 363 3.316588 TGATCAGCTCCATAGTCTCGTTC 59.683 47.826 0.00 0.00 0.00 3.95
363 364 2.723273 TCAGCTCCATAGTCTCGTTCA 58.277 47.619 0.00 0.00 0.00 3.18
364 365 3.291584 TCAGCTCCATAGTCTCGTTCAT 58.708 45.455 0.00 0.00 0.00 2.57
365 366 3.067320 TCAGCTCCATAGTCTCGTTCATG 59.933 47.826 0.00 0.00 0.00 3.07
366 367 2.131183 GCTCCATAGTCTCGTTCATGC 58.869 52.381 0.00 0.00 0.00 4.06
367 368 2.389059 CTCCATAGTCTCGTTCATGCG 58.611 52.381 0.00 0.00 0.00 4.73
368 369 1.749063 TCCATAGTCTCGTTCATGCGT 59.251 47.619 0.00 0.00 0.00 5.24
369 370 2.165641 TCCATAGTCTCGTTCATGCGTT 59.834 45.455 0.00 0.00 0.00 4.84
370 371 2.535984 CCATAGTCTCGTTCATGCGTTC 59.464 50.000 0.00 0.00 0.00 3.95
371 372 1.891178 TAGTCTCGTTCATGCGTTCG 58.109 50.000 0.00 0.00 0.00 3.95
372 373 0.240145 AGTCTCGTTCATGCGTTCGA 59.760 50.000 0.00 0.00 0.00 3.71
373 374 0.362512 GTCTCGTTCATGCGTTCGAC 59.637 55.000 0.00 0.00 0.00 4.20
374 375 1.063412 TCTCGTTCATGCGTTCGACG 61.063 55.000 0.00 3.50 45.88 5.12
375 376 1.334992 CTCGTTCATGCGTTCGACGT 61.335 55.000 8.72 0.00 44.73 4.34
376 377 1.055235 CGTTCATGCGTTCGACGTC 59.945 57.895 5.18 5.18 44.73 4.34
377 378 1.602012 CGTTCATGCGTTCGACGTCA 61.602 55.000 17.16 0.00 44.73 4.35
378 379 0.179282 GTTCATGCGTTCGACGTCAC 60.179 55.000 17.16 6.15 44.73 3.67
379 380 1.602012 TTCATGCGTTCGACGTCACG 61.602 55.000 20.45 20.45 44.73 4.35
383 384 2.755095 CGTTCGACGTCACGCTTC 59.245 61.111 17.16 0.00 36.74 3.86
384 385 1.724929 CGTTCGACGTCACGCTTCT 60.725 57.895 17.16 0.00 36.74 2.85
385 386 1.266786 CGTTCGACGTCACGCTTCTT 61.267 55.000 17.16 0.00 36.74 2.52
386 387 0.430110 GTTCGACGTCACGCTTCTTC 59.570 55.000 17.16 0.00 0.00 2.87
387 388 0.662374 TTCGACGTCACGCTTCTTCC 60.662 55.000 17.16 0.00 0.00 3.46
388 389 2.087009 CGACGTCACGCTTCTTCCC 61.087 63.158 17.16 0.00 0.00 3.97
389 390 1.737008 GACGTCACGCTTCTTCCCC 60.737 63.158 11.55 0.00 0.00 4.81
390 391 2.342279 CGTCACGCTTCTTCCCCA 59.658 61.111 0.00 0.00 0.00 4.96
391 392 1.738099 CGTCACGCTTCTTCCCCAG 60.738 63.158 0.00 0.00 0.00 4.45
392 393 2.035442 GTCACGCTTCTTCCCCAGC 61.035 63.158 0.00 0.00 0.00 4.85
396 397 2.747855 GCTTCTTCCCCAGCGGTG 60.748 66.667 7.86 7.86 0.00 4.94
397 398 2.747855 CTTCTTCCCCAGCGGTGC 60.748 66.667 9.63 0.00 0.00 5.01
398 399 4.344865 TTCTTCCCCAGCGGTGCC 62.345 66.667 9.63 0.00 0.00 5.01
403 404 4.875713 CCCCAGCGGTGCCCATAC 62.876 72.222 9.63 0.00 0.00 2.39
404 405 4.875713 CCCAGCGGTGCCCATACC 62.876 72.222 9.63 0.00 37.37 2.73
405 406 3.797353 CCAGCGGTGCCCATACCT 61.797 66.667 9.63 0.00 38.62 3.08
406 407 2.514592 CAGCGGTGCCCATACCTG 60.515 66.667 0.00 0.00 38.62 4.00
407 408 2.687200 AGCGGTGCCCATACCTGA 60.687 61.111 0.00 0.00 38.62 3.86
408 409 2.270850 GCGGTGCCCATACCTGAA 59.729 61.111 0.00 0.00 38.62 3.02
409 410 1.819632 GCGGTGCCCATACCTGAAG 60.820 63.158 0.00 0.00 38.62 3.02
410 411 1.153168 CGGTGCCCATACCTGAAGG 60.153 63.158 0.00 0.00 38.62 3.46
411 412 1.622607 CGGTGCCCATACCTGAAGGA 61.623 60.000 2.62 0.00 38.62 3.36
412 413 0.623723 GGTGCCCATACCTGAAGGAA 59.376 55.000 2.62 0.00 37.74 3.36
413 414 1.005450 GGTGCCCATACCTGAAGGAAA 59.995 52.381 2.62 0.00 37.74 3.13
414 415 2.556559 GGTGCCCATACCTGAAGGAAAA 60.557 50.000 2.62 0.00 37.74 2.29
415 416 3.365472 GTGCCCATACCTGAAGGAAAAT 58.635 45.455 2.62 0.00 38.94 1.82
416 417 4.532834 GTGCCCATACCTGAAGGAAAATA 58.467 43.478 2.62 0.00 38.94 1.40
417 418 5.140454 GTGCCCATACCTGAAGGAAAATAT 58.860 41.667 2.62 0.00 38.94 1.28
418 419 5.010012 GTGCCCATACCTGAAGGAAAATATG 59.990 44.000 2.62 0.98 38.94 1.78
419 420 4.524328 GCCCATACCTGAAGGAAAATATGG 59.476 45.833 13.31 13.31 38.94 2.74
420 421 4.524328 CCCATACCTGAAGGAAAATATGGC 59.476 45.833 14.27 0.00 38.38 4.40
421 422 5.139727 CCATACCTGAAGGAAAATATGGCA 58.860 41.667 2.62 0.00 35.30 4.92
422 423 5.776716 CCATACCTGAAGGAAAATATGGCAT 59.223 40.000 4.88 4.88 35.30 4.40
423 424 6.268387 CCATACCTGAAGGAAAATATGGCATT 59.732 38.462 4.78 0.00 35.30 3.56
424 425 7.202029 CCATACCTGAAGGAAAATATGGCATTT 60.202 37.037 4.78 0.00 35.30 2.32
425 426 5.981174 ACCTGAAGGAAAATATGGCATTTG 58.019 37.500 4.78 0.00 38.94 2.32
426 427 5.721000 ACCTGAAGGAAAATATGGCATTTGA 59.279 36.000 4.78 0.00 38.94 2.69
427 428 6.213195 ACCTGAAGGAAAATATGGCATTTGAA 59.787 34.615 4.78 0.00 38.94 2.69
428 429 6.759827 CCTGAAGGAAAATATGGCATTTGAAG 59.240 38.462 4.78 0.00 37.39 3.02
429 430 7.364056 CCTGAAGGAAAATATGGCATTTGAAGA 60.364 37.037 4.78 0.00 37.39 2.87
430 431 8.081517 TGAAGGAAAATATGGCATTTGAAGAT 57.918 30.769 4.78 0.00 0.00 2.40
431 432 7.982919 TGAAGGAAAATATGGCATTTGAAGATG 59.017 33.333 4.78 0.00 0.00 2.90
432 433 7.664552 AGGAAAATATGGCATTTGAAGATGA 57.335 32.000 4.78 0.00 0.00 2.92
433 434 8.258850 AGGAAAATATGGCATTTGAAGATGAT 57.741 30.769 4.78 0.00 0.00 2.45
434 435 9.370930 AGGAAAATATGGCATTTGAAGATGATA 57.629 29.630 4.78 0.00 0.00 2.15
439 440 5.700722 TGGCATTTGAAGATGATATCAGC 57.299 39.130 13.13 13.13 0.00 4.26
440 441 4.214758 TGGCATTTGAAGATGATATCAGCG 59.785 41.667 14.93 0.79 37.34 5.18
441 442 4.379186 GGCATTTGAAGATGATATCAGCGG 60.379 45.833 14.93 2.40 37.34 5.52
442 443 4.379186 GCATTTGAAGATGATATCAGCGGG 60.379 45.833 14.93 3.02 37.34 6.13
443 444 3.407424 TTGAAGATGATATCAGCGGGG 57.593 47.619 14.93 0.00 37.34 5.73
444 445 2.329267 TGAAGATGATATCAGCGGGGT 58.671 47.619 14.93 2.63 37.34 4.95
445 446 2.037641 TGAAGATGATATCAGCGGGGTG 59.962 50.000 14.93 0.00 37.34 4.61
446 447 0.979665 AGATGATATCAGCGGGGTGG 59.020 55.000 14.93 0.00 37.34 4.61
447 448 0.976641 GATGATATCAGCGGGGTGGA 59.023 55.000 11.78 0.00 0.00 4.02
448 449 0.687354 ATGATATCAGCGGGGTGGAC 59.313 55.000 11.78 0.00 0.00 4.02
449 450 1.371558 GATATCAGCGGGGTGGACC 59.628 63.158 0.00 0.00 39.11 4.46
457 458 3.254617 GGGGTGGACCGGGAACTT 61.255 66.667 6.32 0.00 41.60 2.66
458 459 2.033602 GGGTGGACCGGGAACTTG 59.966 66.667 6.32 0.00 36.71 3.16
459 460 2.826003 GGGTGGACCGGGAACTTGT 61.826 63.158 6.32 0.00 36.71 3.16
460 461 1.599797 GGTGGACCGGGAACTTGTG 60.600 63.158 6.32 0.00 0.00 3.33
461 462 1.147600 GTGGACCGGGAACTTGTGT 59.852 57.895 6.32 0.00 0.00 3.72
462 463 0.464916 GTGGACCGGGAACTTGTGTT 60.465 55.000 6.32 0.00 39.42 3.32
478 479 9.659830 GAACTTGTGTTCTATCGTAATTTTGTT 57.340 29.630 2.11 0.00 46.56 2.83
479 480 9.659830 AACTTGTGTTCTATCGTAATTTTGTTC 57.340 29.630 0.00 0.00 0.00 3.18
480 481 8.287503 ACTTGTGTTCTATCGTAATTTTGTTCC 58.712 33.333 0.00 0.00 0.00 3.62
481 482 6.823531 TGTGTTCTATCGTAATTTTGTTCCG 58.176 36.000 0.00 0.00 0.00 4.30
482 483 6.645827 TGTGTTCTATCGTAATTTTGTTCCGA 59.354 34.615 0.00 0.00 0.00 4.55
483 484 7.171167 TGTGTTCTATCGTAATTTTGTTCCGAA 59.829 33.333 0.00 0.00 0.00 4.30
484 485 7.476492 GTGTTCTATCGTAATTTTGTTCCGAAC 59.524 37.037 4.18 4.18 0.00 3.95
485 486 6.651755 TCTATCGTAATTTTGTTCCGAACC 57.348 37.500 8.80 0.00 0.00 3.62
486 487 3.791993 TCGTAATTTTGTTCCGAACCG 57.208 42.857 8.80 3.55 0.00 4.44
487 488 3.129871 TCGTAATTTTGTTCCGAACCGT 58.870 40.909 8.80 0.00 0.00 4.83
488 489 3.184178 TCGTAATTTTGTTCCGAACCGTC 59.816 43.478 8.80 0.00 0.00 4.79
489 490 3.665060 CGTAATTTTGTTCCGAACCGTCC 60.665 47.826 8.80 0.00 0.00 4.79
490 491 1.970092 ATTTTGTTCCGAACCGTCCA 58.030 45.000 8.80 0.00 0.00 4.02
491 492 1.747709 TTTTGTTCCGAACCGTCCAA 58.252 45.000 8.80 0.00 0.00 3.53
492 493 1.747709 TTTGTTCCGAACCGTCCAAA 58.252 45.000 8.80 0.00 0.00 3.28
493 494 1.301423 TTGTTCCGAACCGTCCAAAG 58.699 50.000 8.80 0.00 0.00 2.77
494 495 0.533308 TGTTCCGAACCGTCCAAAGG 60.533 55.000 8.80 0.00 0.00 3.11
495 496 1.071814 TTCCGAACCGTCCAAAGGG 59.928 57.895 0.00 0.00 36.46 3.95
496 497 1.409251 TTCCGAACCGTCCAAAGGGA 61.409 55.000 0.00 0.00 42.29 4.20
497 498 1.375523 CCGAACCGTCCAAAGGGAG 60.376 63.158 0.00 0.00 46.12 4.30
498 499 2.033194 CGAACCGTCCAAAGGGAGC 61.033 63.158 0.00 0.00 46.12 4.70
499 500 1.072505 GAACCGTCCAAAGGGAGCA 59.927 57.895 0.00 0.00 46.12 4.26
500 501 0.536460 GAACCGTCCAAAGGGAGCAA 60.536 55.000 0.00 0.00 46.12 3.91
501 502 0.106419 AACCGTCCAAAGGGAGCAAA 60.106 50.000 0.00 0.00 46.12 3.68
502 503 0.537371 ACCGTCCAAAGGGAGCAAAG 60.537 55.000 0.00 0.00 46.12 2.77
503 504 0.537371 CCGTCCAAAGGGAGCAAAGT 60.537 55.000 0.00 0.00 46.12 2.66
504 505 1.271163 CCGTCCAAAGGGAGCAAAGTA 60.271 52.381 0.00 0.00 46.12 2.24
505 506 2.076863 CGTCCAAAGGGAGCAAAGTAG 58.923 52.381 0.00 0.00 46.12 2.57
506 507 1.813178 GTCCAAAGGGAGCAAAGTAGC 59.187 52.381 0.00 0.00 46.12 3.58
507 508 0.804989 CCAAAGGGAGCAAAGTAGCG 59.195 55.000 0.00 0.00 40.15 4.26
508 509 1.523758 CAAAGGGAGCAAAGTAGCGT 58.476 50.000 0.00 0.00 40.15 5.07
509 510 1.464997 CAAAGGGAGCAAAGTAGCGTC 59.535 52.381 0.00 0.00 40.15 5.19
510 511 0.036294 AAGGGAGCAAAGTAGCGTCC 60.036 55.000 0.00 0.00 40.15 4.79
511 512 1.449778 GGGAGCAAAGTAGCGTCCC 60.450 63.158 0.00 0.00 41.43 4.46
512 513 1.810030 GGAGCAAAGTAGCGTCCCG 60.810 63.158 0.00 0.00 40.15 5.14
513 514 1.214589 GAGCAAAGTAGCGTCCCGA 59.785 57.895 0.00 0.00 40.15 5.14
514 515 1.077089 GAGCAAAGTAGCGTCCCGAC 61.077 60.000 0.00 0.00 40.15 4.79
551 552 2.401017 CGATCAGCATGCTGGAAATG 57.599 50.000 39.72 24.07 43.75 2.32
552 553 1.674441 CGATCAGCATGCTGGAAATGT 59.326 47.619 39.72 22.09 43.75 2.71
553 554 2.098607 CGATCAGCATGCTGGAAATGTT 59.901 45.455 39.72 19.78 43.75 2.71
554 555 3.428452 CGATCAGCATGCTGGAAATGTTT 60.428 43.478 39.72 18.58 43.75 2.83
555 556 4.501071 GATCAGCATGCTGGAAATGTTTT 58.499 39.130 39.72 17.67 43.75 2.43
556 557 4.339872 TCAGCATGCTGGAAATGTTTTT 57.660 36.364 39.72 4.57 43.75 1.94
572 573 3.553597 TTTTTAGCGCGGTTGTTGG 57.446 47.368 19.09 0.00 0.00 3.77
573 574 1.022735 TTTTTAGCGCGGTTGTTGGA 58.977 45.000 19.09 0.00 0.00 3.53
574 575 0.589223 TTTTAGCGCGGTTGTTGGAG 59.411 50.000 19.09 0.00 0.00 3.86
575 576 0.249953 TTTAGCGCGGTTGTTGGAGA 60.250 50.000 19.09 0.00 0.00 3.71
576 577 0.036765 TTAGCGCGGTTGTTGGAGAT 60.037 50.000 19.09 0.00 0.00 2.75
577 578 0.739462 TAGCGCGGTTGTTGGAGATG 60.739 55.000 19.09 0.00 0.00 2.90
578 579 2.325082 GCGCGGTTGTTGGAGATGT 61.325 57.895 8.83 0.00 0.00 3.06
579 580 1.852067 GCGCGGTTGTTGGAGATGTT 61.852 55.000 8.83 0.00 0.00 2.71
580 581 0.591170 CGCGGTTGTTGGAGATGTTT 59.409 50.000 0.00 0.00 0.00 2.83
585 586 5.391097 CGCGGTTGTTGGAGATGTTTTTATA 60.391 40.000 0.00 0.00 0.00 0.98
660 661 2.582436 CCGCGTTCCCCACACTAT 59.418 61.111 4.92 0.00 0.00 2.12
701 704 1.375396 CTCCGCACGTCCATTTCCA 60.375 57.895 0.00 0.00 0.00 3.53
716 719 2.548464 TTCCATTCCATTCCCTTGGG 57.452 50.000 0.00 0.00 37.37 4.12
778 792 4.179599 CTCCCTCCCTCCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
790 804 0.983378 CCCCTCCCCATCTCTCGTTT 60.983 60.000 0.00 0.00 0.00 3.60
869 883 4.808895 TCACGATGGACGAATTAAGAATGG 59.191 41.667 0.00 0.00 45.77 3.16
1200 1227 2.185608 GAGGAGAGCAAGACCGCC 59.814 66.667 0.00 0.00 0.00 6.13
1435 1462 2.825861 GGACGACTTCCAGGTAAACA 57.174 50.000 0.00 0.00 45.10 2.83
1436 1463 2.410939 GGACGACTTCCAGGTAAACAC 58.589 52.381 0.00 0.00 45.10 3.32
1437 1464 2.056577 GACGACTTCCAGGTAAACACG 58.943 52.381 0.00 0.00 0.00 4.49
1439 1466 2.622942 ACGACTTCCAGGTAAACACGTA 59.377 45.455 0.00 0.00 0.00 3.57
1441 1468 3.304928 CGACTTCCAGGTAAACACGTACT 60.305 47.826 0.00 0.00 0.00 2.73
1442 1469 3.985925 GACTTCCAGGTAAACACGTACTG 59.014 47.826 0.00 0.00 0.00 2.74
1461 1488 4.974591 ACTGCGTTTATCTTGCTTCATTC 58.025 39.130 0.00 0.00 0.00 2.67
1469 1496 1.709147 CTTGCTTCATTCCCTCGCCG 61.709 60.000 0.00 0.00 0.00 6.46
1500 1566 0.394625 GCTACCTGACCGGAGAGAGT 60.395 60.000 9.46 6.19 36.31 3.24
2034 2101 3.370672 TGAATTGGTTGATCGATGACGTG 59.629 43.478 0.54 0.00 40.69 4.49
2272 2777 2.111251 GAGAAGTATGGCCGGCCC 59.889 66.667 41.75 26.88 34.56 5.80
2273 2778 3.809374 GAGAAGTATGGCCGGCCCG 62.809 68.421 41.75 0.00 35.87 6.13
2308 2813 1.469251 CGATTGATTCACGACGAGGGT 60.469 52.381 0.00 0.00 0.00 4.34
2403 2908 1.550130 CGCCCCCAACAAGACTCCTA 61.550 60.000 0.00 0.00 0.00 2.94
2405 2910 1.074889 GCCCCCAACAAGACTCCTAAA 59.925 52.381 0.00 0.00 0.00 1.85
2407 2912 2.375509 CCCCCAACAAGACTCCTAAAGT 59.624 50.000 0.00 0.00 42.42 2.66
2412 2917 6.472887 CCCAACAAGACTCCTAAAGTGATTA 58.527 40.000 0.00 0.00 38.74 1.75
2414 2919 7.066284 CCCAACAAGACTCCTAAAGTGATTATG 59.934 40.741 0.00 0.00 38.74 1.90
2417 2922 7.907389 ACAAGACTCCTAAAGTGATTATGTGA 58.093 34.615 0.00 0.00 38.74 3.58
2448 2954 2.477880 AAAAATCGGCCCAGTAGCG 58.522 52.632 0.00 0.00 0.00 4.26
2449 2955 0.322187 AAAAATCGGCCCAGTAGCGT 60.322 50.000 0.00 0.00 0.00 5.07
2451 2957 1.614241 AAATCGGCCCAGTAGCGTCT 61.614 55.000 0.00 0.00 0.00 4.18
2452 2958 1.614241 AATCGGCCCAGTAGCGTCTT 61.614 55.000 0.00 0.00 0.00 3.01
2461 2967 0.977395 AGTAGCGTCTTCAAAGGCCT 59.023 50.000 0.00 0.00 0.00 5.19
2624 3131 1.136774 CGCTTCGTCGTCCTCATCA 59.863 57.895 0.00 0.00 0.00 3.07
2634 3141 1.187087 GTCCTCATCACCTCGGTTCT 58.813 55.000 0.00 0.00 0.00 3.01
2960 3470 3.744719 CACGAGGACGAAGCCCGA 61.745 66.667 2.99 0.00 42.66 5.14
2978 3488 1.883275 CGACTTCTCTATGAGGCCGAT 59.117 52.381 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.505217 CGCTAAACTGCAGCCGCG 62.505 66.667 15.27 18.13 42.97 6.46
1 2 4.818835 GCGCTAAACTGCAGCCGC 62.819 66.667 15.27 15.99 35.53 6.53
3 4 3.368455 GACGCGCTAAACTGCAGCC 62.368 63.158 15.27 0.00 35.53 4.85
4 5 2.096594 GACGCGCTAAACTGCAGC 59.903 61.111 15.27 0.00 35.61 5.25
5 6 1.284982 ACAGACGCGCTAAACTGCAG 61.285 55.000 13.48 13.48 34.25 4.41
6 7 0.878523 AACAGACGCGCTAAACTGCA 60.879 50.000 5.73 0.00 34.25 4.41
7 8 0.451135 CAACAGACGCGCTAAACTGC 60.451 55.000 5.73 0.00 34.25 4.40
8 9 0.163788 CCAACAGACGCGCTAAACTG 59.836 55.000 5.73 10.90 36.58 3.16
9 10 0.032952 TCCAACAGACGCGCTAAACT 59.967 50.000 5.73 0.00 0.00 2.66
10 11 0.438830 CTCCAACAGACGCGCTAAAC 59.561 55.000 5.73 0.00 0.00 2.01
11 12 1.289109 GCTCCAACAGACGCGCTAAA 61.289 55.000 5.73 0.00 0.00 1.85
12 13 1.736645 GCTCCAACAGACGCGCTAA 60.737 57.895 5.73 0.00 0.00 3.09
13 14 2.126071 GCTCCAACAGACGCGCTA 60.126 61.111 5.73 0.00 0.00 4.26
18 19 2.811317 GAGCCGCTCCAACAGACG 60.811 66.667 9.42 0.00 0.00 4.18
19 20 1.739562 CTGAGCCGCTCCAACAGAC 60.740 63.158 17.81 0.00 0.00 3.51
20 21 1.908299 TCTGAGCCGCTCCAACAGA 60.908 57.895 17.81 11.21 35.65 3.41
21 22 1.739562 GTCTGAGCCGCTCCAACAG 60.740 63.158 17.81 9.01 0.00 3.16
22 23 2.343758 GTCTGAGCCGCTCCAACA 59.656 61.111 17.81 0.00 0.00 3.33
23 24 2.811317 CGTCTGAGCCGCTCCAAC 60.811 66.667 17.81 13.74 0.00 3.77
30 31 0.387367 ATTATAGCGCGTCTGAGCCG 60.387 55.000 8.43 0.00 42.51 5.52
31 32 1.784525 AATTATAGCGCGTCTGAGCC 58.215 50.000 8.43 0.00 42.51 4.70
32 33 2.660362 GCAAATTATAGCGCGTCTGAGC 60.660 50.000 8.43 0.00 41.75 4.26
33 34 2.539688 TGCAAATTATAGCGCGTCTGAG 59.460 45.455 8.43 0.00 0.00 3.35
34 35 2.539688 CTGCAAATTATAGCGCGTCTGA 59.460 45.455 8.43 0.00 0.00 3.27
35 36 2.896289 CTGCAAATTATAGCGCGTCTG 58.104 47.619 8.43 0.00 0.00 3.51
36 37 1.261619 GCTGCAAATTATAGCGCGTCT 59.738 47.619 8.43 8.22 0.00 4.18
37 38 1.663494 GCTGCAAATTATAGCGCGTC 58.337 50.000 8.43 0.00 0.00 5.19
38 39 3.825812 GCTGCAAATTATAGCGCGT 57.174 47.368 8.43 0.00 0.00 6.01
42 43 0.385974 CGGCCGCTGCAAATTATAGC 60.386 55.000 14.67 0.00 40.13 2.97
43 44 0.385974 GCGGCCGCTGCAAATTATAG 60.386 55.000 41.71 0.75 40.13 1.31
44 45 1.652012 GCGGCCGCTGCAAATTATA 59.348 52.632 41.71 0.00 40.13 0.98
45 46 2.412937 GCGGCCGCTGCAAATTAT 59.587 55.556 41.71 0.00 40.13 1.28
73 74 4.020378 TTTTTGCGCGACGGGAGC 62.020 61.111 12.10 0.00 42.40 4.70
74 75 2.113131 AAGTTTTTGCGCGACGGGAG 62.113 55.000 12.10 0.00 0.00 4.30
75 76 1.716826 AAAGTTTTTGCGCGACGGGA 61.717 50.000 12.10 0.00 0.00 5.14
76 77 0.868177 AAAAGTTTTTGCGCGACGGG 60.868 50.000 12.10 7.67 0.00 5.28
77 78 0.917939 AAAAAGTTTTTGCGCGACGG 59.082 45.000 12.10 0.00 0.00 4.79
93 94 5.335348 GCTCCTAGCGTTTATGTTCCAAAAA 60.335 40.000 0.00 0.00 0.00 1.94
94 95 4.155280 GCTCCTAGCGTTTATGTTCCAAAA 59.845 41.667 0.00 0.00 0.00 2.44
95 96 3.687698 GCTCCTAGCGTTTATGTTCCAAA 59.312 43.478 0.00 0.00 0.00 3.28
96 97 3.267483 GCTCCTAGCGTTTATGTTCCAA 58.733 45.455 0.00 0.00 0.00 3.53
97 98 2.901249 GCTCCTAGCGTTTATGTTCCA 58.099 47.619 0.00 0.00 0.00 3.53
116 117 6.727569 CTTTATTAATTTAAAGCCGGACGC 57.272 37.500 5.05 0.00 33.69 5.19
140 141 4.489771 GTGGATCCCGCCTGGTGG 62.490 72.222 19.59 19.59 34.77 4.61
141 142 3.716195 TGTGGATCCCGCCTGGTG 61.716 66.667 9.90 0.00 32.22 4.17
142 143 3.717294 GTGTGGATCCCGCCTGGT 61.717 66.667 9.90 0.00 32.22 4.00
143 144 2.762969 TTTGTGTGGATCCCGCCTGG 62.763 60.000 9.90 0.00 32.22 4.45
144 145 0.680921 ATTTGTGTGGATCCCGCCTG 60.681 55.000 9.90 0.00 32.22 4.85
145 146 0.039618 AATTTGTGTGGATCCCGCCT 59.960 50.000 9.90 0.00 32.22 5.52
146 147 1.757682 TAATTTGTGTGGATCCCGCC 58.242 50.000 9.90 0.00 32.22 6.13
147 148 2.479560 GCTTAATTTGTGTGGATCCCGC 60.480 50.000 9.90 8.02 34.12 6.13
148 149 2.099098 GGCTTAATTTGTGTGGATCCCG 59.901 50.000 9.90 0.00 0.00 5.14
149 150 3.365472 AGGCTTAATTTGTGTGGATCCC 58.635 45.455 9.90 0.85 0.00 3.85
150 151 5.417580 TGTAAGGCTTAATTTGTGTGGATCC 59.582 40.000 8.86 4.20 0.00 3.36
151 152 6.509418 TGTAAGGCTTAATTTGTGTGGATC 57.491 37.500 8.86 0.00 0.00 3.36
152 153 6.909550 TTGTAAGGCTTAATTTGTGTGGAT 57.090 33.333 8.86 0.00 0.00 3.41
153 154 6.461788 GGTTTGTAAGGCTTAATTTGTGTGGA 60.462 38.462 8.86 0.00 0.00 4.02
154 155 5.694458 GGTTTGTAAGGCTTAATTTGTGTGG 59.306 40.000 8.86 0.00 0.00 4.17
155 156 5.401079 CGGTTTGTAAGGCTTAATTTGTGTG 59.599 40.000 8.86 0.00 0.00 3.82
156 157 5.299782 TCGGTTTGTAAGGCTTAATTTGTGT 59.700 36.000 8.86 0.00 0.00 3.72
157 158 5.764131 TCGGTTTGTAAGGCTTAATTTGTG 58.236 37.500 8.86 0.00 0.00 3.33
158 159 6.394025 TTCGGTTTGTAAGGCTTAATTTGT 57.606 33.333 8.86 0.00 0.00 2.83
159 160 8.973835 TTATTCGGTTTGTAAGGCTTAATTTG 57.026 30.769 8.86 0.00 0.00 2.32
160 161 9.984190 TTTTATTCGGTTTGTAAGGCTTAATTT 57.016 25.926 8.86 0.00 0.00 1.82
161 162 9.414295 GTTTTATTCGGTTTGTAAGGCTTAATT 57.586 29.630 8.86 0.00 0.00 1.40
162 163 8.578151 TGTTTTATTCGGTTTGTAAGGCTTAAT 58.422 29.630 8.86 0.77 0.00 1.40
163 164 7.938715 TGTTTTATTCGGTTTGTAAGGCTTAA 58.061 30.769 8.86 0.00 0.00 1.85
164 165 7.229106 ACTGTTTTATTCGGTTTGTAAGGCTTA 59.771 33.333 2.04 2.04 0.00 3.09
165 166 6.040054 ACTGTTTTATTCGGTTTGTAAGGCTT 59.960 34.615 4.58 4.58 0.00 4.35
166 167 5.533528 ACTGTTTTATTCGGTTTGTAAGGCT 59.466 36.000 0.00 0.00 0.00 4.58
167 168 5.765176 ACTGTTTTATTCGGTTTGTAAGGC 58.235 37.500 0.00 0.00 0.00 4.35
168 169 6.961576 TGACTGTTTTATTCGGTTTGTAAGG 58.038 36.000 0.00 0.00 0.00 2.69
169 170 8.286800 TGATGACTGTTTTATTCGGTTTGTAAG 58.713 33.333 0.00 0.00 0.00 2.34
170 171 8.155821 TGATGACTGTTTTATTCGGTTTGTAA 57.844 30.769 0.00 0.00 0.00 2.41
171 172 7.731882 TGATGACTGTTTTATTCGGTTTGTA 57.268 32.000 0.00 0.00 0.00 2.41
172 173 6.627395 TGATGACTGTTTTATTCGGTTTGT 57.373 33.333 0.00 0.00 0.00 2.83
173 174 6.088085 GCTTGATGACTGTTTTATTCGGTTTG 59.912 38.462 0.00 0.00 0.00 2.93
174 175 6.149633 GCTTGATGACTGTTTTATTCGGTTT 58.850 36.000 0.00 0.00 0.00 3.27
175 176 5.335661 GGCTTGATGACTGTTTTATTCGGTT 60.336 40.000 0.00 0.00 0.00 4.44
176 177 4.156008 GGCTTGATGACTGTTTTATTCGGT 59.844 41.667 0.00 0.00 0.00 4.69
177 178 4.438744 GGGCTTGATGACTGTTTTATTCGG 60.439 45.833 0.00 0.00 0.00 4.30
178 179 4.155826 TGGGCTTGATGACTGTTTTATTCG 59.844 41.667 0.00 0.00 0.00 3.34
179 180 5.402398 GTGGGCTTGATGACTGTTTTATTC 58.598 41.667 0.00 0.00 0.00 1.75
180 181 4.082787 CGTGGGCTTGATGACTGTTTTATT 60.083 41.667 0.00 0.00 0.00 1.40
181 182 3.440173 CGTGGGCTTGATGACTGTTTTAT 59.560 43.478 0.00 0.00 0.00 1.40
182 183 2.811431 CGTGGGCTTGATGACTGTTTTA 59.189 45.455 0.00 0.00 0.00 1.52
183 184 1.608590 CGTGGGCTTGATGACTGTTTT 59.391 47.619 0.00 0.00 0.00 2.43
184 185 1.238439 CGTGGGCTTGATGACTGTTT 58.762 50.000 0.00 0.00 0.00 2.83
185 186 0.606401 CCGTGGGCTTGATGACTGTT 60.606 55.000 0.00 0.00 0.00 3.16
186 187 1.003355 CCGTGGGCTTGATGACTGT 60.003 57.895 0.00 0.00 0.00 3.55
187 188 2.401766 GCCGTGGGCTTGATGACTG 61.402 63.158 0.00 0.00 46.69 3.51
188 189 2.045926 GCCGTGGGCTTGATGACT 60.046 61.111 0.00 0.00 46.69 3.41
198 199 0.815615 GCTTTATCCTGAGCCGTGGG 60.816 60.000 0.00 0.00 32.80 4.61
199 200 0.179000 AGCTTTATCCTGAGCCGTGG 59.821 55.000 0.00 0.00 39.71 4.94
200 201 2.890808 TAGCTTTATCCTGAGCCGTG 57.109 50.000 0.00 0.00 39.71 4.94
201 202 3.031736 TCTTAGCTTTATCCTGAGCCGT 58.968 45.455 0.00 0.00 39.71 5.68
202 203 3.735237 TCTTAGCTTTATCCTGAGCCG 57.265 47.619 0.00 0.00 39.71 5.52
203 204 4.141597 ACCTTCTTAGCTTTATCCTGAGCC 60.142 45.833 0.00 0.00 39.71 4.70
204 205 5.029807 ACCTTCTTAGCTTTATCCTGAGC 57.970 43.478 0.00 0.00 39.17 4.26
205 206 6.045955 GTGACCTTCTTAGCTTTATCCTGAG 58.954 44.000 0.00 0.00 0.00 3.35
206 207 5.483937 TGTGACCTTCTTAGCTTTATCCTGA 59.516 40.000 0.00 0.00 0.00 3.86
207 208 5.734720 TGTGACCTTCTTAGCTTTATCCTG 58.265 41.667 0.00 0.00 0.00 3.86
208 209 5.627968 GCTGTGACCTTCTTAGCTTTATCCT 60.628 44.000 0.00 0.00 0.00 3.24
209 210 4.572795 GCTGTGACCTTCTTAGCTTTATCC 59.427 45.833 0.00 0.00 0.00 2.59
210 211 4.572795 GGCTGTGACCTTCTTAGCTTTATC 59.427 45.833 0.00 0.00 34.89 1.75
211 212 4.019321 TGGCTGTGACCTTCTTAGCTTTAT 60.019 41.667 0.00 0.00 34.89 1.40
212 213 3.326588 TGGCTGTGACCTTCTTAGCTTTA 59.673 43.478 0.00 0.00 34.89 1.85
213 214 2.106511 TGGCTGTGACCTTCTTAGCTTT 59.893 45.455 0.00 0.00 34.89 3.51
214 215 1.699634 TGGCTGTGACCTTCTTAGCTT 59.300 47.619 0.00 0.00 34.89 3.74
215 216 1.002544 GTGGCTGTGACCTTCTTAGCT 59.997 52.381 0.00 0.00 34.89 3.32
216 217 1.270839 TGTGGCTGTGACCTTCTTAGC 60.271 52.381 0.00 0.00 0.00 3.09
217 218 2.839486 TGTGGCTGTGACCTTCTTAG 57.161 50.000 0.00 0.00 0.00 2.18
218 219 2.438021 ACTTGTGGCTGTGACCTTCTTA 59.562 45.455 0.00 0.00 0.00 2.10
219 220 1.212935 ACTTGTGGCTGTGACCTTCTT 59.787 47.619 0.00 0.00 0.00 2.52
220 221 0.839946 ACTTGTGGCTGTGACCTTCT 59.160 50.000 0.00 0.00 0.00 2.85
221 222 1.604278 GAACTTGTGGCTGTGACCTTC 59.396 52.381 0.00 0.00 0.00 3.46
222 223 1.064758 TGAACTTGTGGCTGTGACCTT 60.065 47.619 0.00 0.00 0.00 3.50
223 224 0.546122 TGAACTTGTGGCTGTGACCT 59.454 50.000 0.00 0.00 0.00 3.85
224 225 1.388547 TTGAACTTGTGGCTGTGACC 58.611 50.000 0.00 0.00 0.00 4.02
225 226 3.365364 GCTATTGAACTTGTGGCTGTGAC 60.365 47.826 0.00 0.00 0.00 3.67
226 227 2.813754 GCTATTGAACTTGTGGCTGTGA 59.186 45.455 0.00 0.00 0.00 3.58
227 228 2.413239 CGCTATTGAACTTGTGGCTGTG 60.413 50.000 0.00 0.00 0.00 3.66
228 229 1.806542 CGCTATTGAACTTGTGGCTGT 59.193 47.619 0.00 0.00 0.00 4.40
229 230 1.466360 GCGCTATTGAACTTGTGGCTG 60.466 52.381 0.00 0.00 0.00 4.85
230 231 0.804989 GCGCTATTGAACTTGTGGCT 59.195 50.000 0.00 0.00 0.00 4.75
231 232 0.521291 TGCGCTATTGAACTTGTGGC 59.479 50.000 9.73 0.00 0.00 5.01
232 233 2.987413 TTGCGCTATTGAACTTGTGG 57.013 45.000 9.73 0.00 0.00 4.17
233 234 3.120121 GCTTTTGCGCTATTGAACTTGTG 59.880 43.478 9.73 0.00 34.86 3.33
234 235 3.308530 GCTTTTGCGCTATTGAACTTGT 58.691 40.909 9.73 0.00 34.86 3.16
235 236 3.959609 GCTTTTGCGCTATTGAACTTG 57.040 42.857 9.73 0.00 34.86 3.16
248 249 1.731969 CTTGCTGCTCCGCTTTTGC 60.732 57.895 0.00 0.00 43.23 3.68
249 250 0.386478 GTCTTGCTGCTCCGCTTTTG 60.386 55.000 0.00 0.00 0.00 2.44
250 251 0.819259 TGTCTTGCTGCTCCGCTTTT 60.819 50.000 0.00 0.00 0.00 2.27
251 252 0.819259 TTGTCTTGCTGCTCCGCTTT 60.819 50.000 0.00 0.00 0.00 3.51
252 253 0.819259 TTTGTCTTGCTGCTCCGCTT 60.819 50.000 0.00 0.00 0.00 4.68
253 254 0.819259 TTTTGTCTTGCTGCTCCGCT 60.819 50.000 0.00 0.00 0.00 5.52
254 255 0.386478 CTTTTGTCTTGCTGCTCCGC 60.386 55.000 0.00 0.00 0.00 5.54
255 256 0.386478 GCTTTTGTCTTGCTGCTCCG 60.386 55.000 0.00 0.00 0.00 4.63
256 257 0.957362 AGCTTTTGTCTTGCTGCTCC 59.043 50.000 0.00 0.00 35.54 4.70
257 258 2.413897 GCTAGCTTTTGTCTTGCTGCTC 60.414 50.000 7.70 0.00 37.62 4.26
258 259 1.538950 GCTAGCTTTTGTCTTGCTGCT 59.461 47.619 7.70 0.00 37.62 4.24
259 260 1.538950 AGCTAGCTTTTGTCTTGCTGC 59.461 47.619 12.68 0.00 40.19 5.25
260 261 5.362556 TTTAGCTAGCTTTTGTCTTGCTG 57.637 39.130 24.88 0.00 41.37 4.41
261 262 5.532779 ACTTTTAGCTAGCTTTTGTCTTGCT 59.467 36.000 24.88 0.00 43.13 3.91
262 263 5.763088 ACTTTTAGCTAGCTTTTGTCTTGC 58.237 37.500 24.88 0.00 33.56 4.01
263 264 8.311650 TCTACTTTTAGCTAGCTTTTGTCTTG 57.688 34.615 24.88 7.89 0.00 3.02
264 265 7.604545 CCTCTACTTTTAGCTAGCTTTTGTCTT 59.395 37.037 24.88 4.47 0.00 3.01
265 266 7.100409 CCTCTACTTTTAGCTAGCTTTTGTCT 58.900 38.462 24.88 4.22 0.00 3.41
266 267 6.874664 ACCTCTACTTTTAGCTAGCTTTTGTC 59.125 38.462 24.88 0.00 0.00 3.18
267 268 6.770542 ACCTCTACTTTTAGCTAGCTTTTGT 58.229 36.000 24.88 17.89 0.00 2.83
268 269 7.100409 AGACCTCTACTTTTAGCTAGCTTTTG 58.900 38.462 24.88 13.12 0.00 2.44
269 270 7.038941 TGAGACCTCTACTTTTAGCTAGCTTTT 60.039 37.037 24.88 0.39 0.00 2.27
270 271 6.437793 TGAGACCTCTACTTTTAGCTAGCTTT 59.562 38.462 24.88 1.27 0.00 3.51
271 272 5.952947 TGAGACCTCTACTTTTAGCTAGCTT 59.047 40.000 24.88 6.85 0.00 3.74
272 273 5.511363 TGAGACCTCTACTTTTAGCTAGCT 58.489 41.667 23.12 23.12 0.00 3.32
273 274 5.838531 TGAGACCTCTACTTTTAGCTAGC 57.161 43.478 6.62 6.62 0.00 3.42
274 275 7.575414 TCATGAGACCTCTACTTTTAGCTAG 57.425 40.000 0.00 0.00 0.00 3.42
275 276 7.780271 TGATCATGAGACCTCTACTTTTAGCTA 59.220 37.037 0.09 0.00 0.00 3.32
276 277 6.609212 TGATCATGAGACCTCTACTTTTAGCT 59.391 38.462 0.09 0.00 0.00 3.32
277 278 6.810911 TGATCATGAGACCTCTACTTTTAGC 58.189 40.000 0.09 0.00 0.00 3.09
278 279 7.437862 GCTTGATCATGAGACCTCTACTTTTAG 59.562 40.741 12.54 0.00 0.00 1.85
279 280 7.268586 GCTTGATCATGAGACCTCTACTTTTA 58.731 38.462 12.54 0.00 0.00 1.52
280 281 6.112058 GCTTGATCATGAGACCTCTACTTTT 58.888 40.000 12.54 0.00 0.00 2.27
281 282 5.396213 GGCTTGATCATGAGACCTCTACTTT 60.396 44.000 12.54 0.00 0.00 2.66
282 283 4.100808 GGCTTGATCATGAGACCTCTACTT 59.899 45.833 12.54 0.00 0.00 2.24
283 284 3.640967 GGCTTGATCATGAGACCTCTACT 59.359 47.826 12.54 0.00 0.00 2.57
284 285 3.551863 CGGCTTGATCATGAGACCTCTAC 60.552 52.174 12.54 0.00 0.00 2.59
285 286 2.625314 CGGCTTGATCATGAGACCTCTA 59.375 50.000 12.54 0.00 0.00 2.43
286 287 1.411977 CGGCTTGATCATGAGACCTCT 59.588 52.381 12.54 0.00 0.00 3.69
287 288 1.137872 ACGGCTTGATCATGAGACCTC 59.862 52.381 12.54 0.00 0.00 3.85
288 289 1.137872 GACGGCTTGATCATGAGACCT 59.862 52.381 12.54 0.00 0.00 3.85
289 290 1.134699 TGACGGCTTGATCATGAGACC 60.135 52.381 12.54 5.53 0.00 3.85
290 291 2.299993 TGACGGCTTGATCATGAGAC 57.700 50.000 12.54 1.32 0.00 3.36
291 292 2.224137 GGATGACGGCTTGATCATGAGA 60.224 50.000 12.54 0.00 35.67 3.27
292 293 2.141517 GGATGACGGCTTGATCATGAG 58.858 52.381 12.54 1.33 35.67 2.90
293 294 1.202687 GGGATGACGGCTTGATCATGA 60.203 52.381 12.54 0.00 35.67 3.07
294 295 1.202734 AGGGATGACGGCTTGATCATG 60.203 52.381 0.00 0.00 35.67 3.07
295 296 1.135094 AGGGATGACGGCTTGATCAT 58.865 50.000 0.00 0.00 38.28 2.45
296 297 0.911769 AAGGGATGACGGCTTGATCA 59.088 50.000 0.00 0.00 0.00 2.92
297 298 1.303309 CAAGGGATGACGGCTTGATC 58.697 55.000 0.00 0.00 0.00 2.92
298 299 0.620556 ACAAGGGATGACGGCTTGAT 59.379 50.000 0.00 0.00 0.00 2.57
299 300 0.036388 GACAAGGGATGACGGCTTGA 60.036 55.000 0.00 0.00 0.00 3.02
300 301 1.361668 CGACAAGGGATGACGGCTTG 61.362 60.000 0.00 0.00 42.26 4.01
301 302 1.079127 CGACAAGGGATGACGGCTT 60.079 57.895 0.00 0.00 42.26 4.35
302 303 2.579201 CGACAAGGGATGACGGCT 59.421 61.111 0.00 0.00 42.26 5.52
306 307 0.321653 AAGGCACGACAAGGGATGAC 60.322 55.000 0.00 0.00 0.00 3.06
307 308 0.036388 GAAGGCACGACAAGGGATGA 60.036 55.000 0.00 0.00 0.00 2.92
308 309 0.321564 TGAAGGCACGACAAGGGATG 60.322 55.000 0.00 0.00 0.00 3.51
309 310 0.321653 GTGAAGGCACGACAAGGGAT 60.322 55.000 0.00 0.00 34.94 3.85
310 311 1.070786 GTGAAGGCACGACAAGGGA 59.929 57.895 0.00 0.00 34.94 4.20
311 312 1.966451 GGTGAAGGCACGACAAGGG 60.966 63.158 0.00 0.00 46.09 3.95
312 313 0.606401 ATGGTGAAGGCACGACAAGG 60.606 55.000 0.00 0.00 46.09 3.61
313 314 0.518636 CATGGTGAAGGCACGACAAG 59.481 55.000 0.00 0.00 46.09 3.16
314 315 0.888736 CCATGGTGAAGGCACGACAA 60.889 55.000 2.57 0.00 46.09 3.18
315 316 1.302431 CCATGGTGAAGGCACGACA 60.302 57.895 2.57 0.00 46.09 4.35
316 317 1.298859 GACCATGGTGAAGGCACGAC 61.299 60.000 25.52 0.00 46.09 4.34
317 318 1.003839 GACCATGGTGAAGGCACGA 60.004 57.895 25.52 0.00 46.09 4.35
318 319 2.390599 CGACCATGGTGAAGGCACG 61.391 63.158 25.52 14.03 46.09 5.34
319 320 1.298859 GACGACCATGGTGAAGGCAC 61.299 60.000 25.52 4.57 44.39 5.01
320 321 1.003839 GACGACCATGGTGAAGGCA 60.004 57.895 25.52 0.00 0.00 4.75
321 322 0.321653 AAGACGACCATGGTGAAGGC 60.322 55.000 25.52 15.73 0.00 4.35
322 323 1.001974 TCAAGACGACCATGGTGAAGG 59.998 52.381 25.52 11.11 0.00 3.46
323 324 2.455674 TCAAGACGACCATGGTGAAG 57.544 50.000 25.52 15.75 0.00 3.02
324 325 2.301583 TGATCAAGACGACCATGGTGAA 59.698 45.455 25.52 0.00 0.00 3.18
325 326 1.899142 TGATCAAGACGACCATGGTGA 59.101 47.619 25.52 12.84 0.00 4.02
326 327 2.274437 CTGATCAAGACGACCATGGTG 58.726 52.381 25.52 16.90 0.00 4.17
327 328 1.406069 GCTGATCAAGACGACCATGGT 60.406 52.381 19.89 19.89 0.00 3.55
328 329 1.134580 AGCTGATCAAGACGACCATGG 60.135 52.381 11.19 11.19 0.00 3.66
329 330 2.200067 GAGCTGATCAAGACGACCATG 58.800 52.381 0.00 0.00 0.00 3.66
330 331 1.137872 GGAGCTGATCAAGACGACCAT 59.862 52.381 0.00 0.00 0.00 3.55
331 332 0.532573 GGAGCTGATCAAGACGACCA 59.467 55.000 0.00 0.00 0.00 4.02
332 333 0.532573 TGGAGCTGATCAAGACGACC 59.467 55.000 0.00 0.55 0.00 4.79
333 334 2.593346 ATGGAGCTGATCAAGACGAC 57.407 50.000 0.00 0.00 0.00 4.34
334 335 3.291584 ACTATGGAGCTGATCAAGACGA 58.708 45.455 0.00 0.00 0.00 4.20
335 336 3.317711 AGACTATGGAGCTGATCAAGACG 59.682 47.826 0.00 0.00 0.00 4.18
336 337 4.556501 CGAGACTATGGAGCTGATCAAGAC 60.557 50.000 0.00 0.00 0.00 3.01
337 338 3.567585 CGAGACTATGGAGCTGATCAAGA 59.432 47.826 0.00 0.00 0.00 3.02
338 339 3.317711 ACGAGACTATGGAGCTGATCAAG 59.682 47.826 0.00 0.00 0.00 3.02
339 340 3.291584 ACGAGACTATGGAGCTGATCAA 58.708 45.455 0.00 0.00 0.00 2.57
340 341 2.937519 ACGAGACTATGGAGCTGATCA 58.062 47.619 0.00 0.00 0.00 2.92
341 342 3.316588 TGAACGAGACTATGGAGCTGATC 59.683 47.826 0.00 0.00 0.00 2.92
342 343 3.291584 TGAACGAGACTATGGAGCTGAT 58.708 45.455 0.00 0.00 0.00 2.90
343 344 2.723273 TGAACGAGACTATGGAGCTGA 58.277 47.619 0.00 0.00 0.00 4.26
344 345 3.379240 CATGAACGAGACTATGGAGCTG 58.621 50.000 0.00 0.00 0.00 4.24
345 346 2.223923 GCATGAACGAGACTATGGAGCT 60.224 50.000 0.00 0.00 0.00 4.09
346 347 2.131183 GCATGAACGAGACTATGGAGC 58.869 52.381 0.00 0.00 0.00 4.70
347 348 2.223595 ACGCATGAACGAGACTATGGAG 60.224 50.000 0.00 0.00 36.70 3.86
348 349 1.749063 ACGCATGAACGAGACTATGGA 59.251 47.619 0.00 0.00 36.70 3.41
349 350 2.209838 ACGCATGAACGAGACTATGG 57.790 50.000 0.00 0.00 36.70 2.74
350 351 2.214244 CGAACGCATGAACGAGACTATG 59.786 50.000 0.00 0.00 36.70 2.23
351 352 2.096980 TCGAACGCATGAACGAGACTAT 59.903 45.455 0.00 0.00 36.70 2.12
352 353 1.465777 TCGAACGCATGAACGAGACTA 59.534 47.619 0.00 0.00 36.70 2.59
353 354 0.240145 TCGAACGCATGAACGAGACT 59.760 50.000 0.00 0.00 36.70 3.24
354 355 0.362512 GTCGAACGCATGAACGAGAC 59.637 55.000 0.00 1.54 35.52 3.36
355 356 1.063412 CGTCGAACGCATGAACGAGA 61.063 55.000 0.00 0.00 33.65 4.04
356 357 1.337150 CGTCGAACGCATGAACGAG 59.663 57.895 0.00 0.00 33.65 4.18
357 358 3.443546 CGTCGAACGCATGAACGA 58.556 55.556 0.00 0.00 33.65 3.85
367 368 0.430110 GAAGAAGCGTGACGTCGAAC 59.570 55.000 11.62 3.35 0.00 3.95
368 369 0.662374 GGAAGAAGCGTGACGTCGAA 60.662 55.000 11.62 0.00 0.00 3.71
369 370 1.081641 GGAAGAAGCGTGACGTCGA 60.082 57.895 11.62 0.00 0.00 4.20
370 371 2.087009 GGGAAGAAGCGTGACGTCG 61.087 63.158 11.62 1.01 0.00 5.12
371 372 1.737008 GGGGAAGAAGCGTGACGTC 60.737 63.158 9.11 9.11 0.00 4.34
372 373 2.342648 GGGGAAGAAGCGTGACGT 59.657 61.111 6.91 0.00 0.00 4.34
373 374 1.738099 CTGGGGAAGAAGCGTGACG 60.738 63.158 0.00 0.00 0.00 4.35
374 375 2.035442 GCTGGGGAAGAAGCGTGAC 61.035 63.158 0.00 0.00 0.00 3.67
375 376 2.347490 GCTGGGGAAGAAGCGTGA 59.653 61.111 0.00 0.00 0.00 4.35
379 380 2.747855 CACCGCTGGGGAAGAAGC 60.748 66.667 18.53 0.00 39.97 3.86
380 381 2.747855 GCACCGCTGGGGAAGAAG 60.748 66.667 18.53 3.10 39.97 2.85
381 382 4.344865 GGCACCGCTGGGGAAGAA 62.345 66.667 18.53 0.00 39.97 2.52
392 393 1.622607 TCCTTCAGGTATGGGCACCG 61.623 60.000 0.00 0.00 44.95 4.94
393 394 0.623723 TTCCTTCAGGTATGGGCACC 59.376 55.000 0.00 0.00 43.08 5.01
394 395 2.507407 TTTCCTTCAGGTATGGGCAC 57.493 50.000 0.00 0.00 36.34 5.01
395 396 3.756082 ATTTTCCTTCAGGTATGGGCA 57.244 42.857 0.00 0.00 36.34 5.36
396 397 4.524328 CCATATTTTCCTTCAGGTATGGGC 59.476 45.833 10.52 0.00 37.14 5.36
397 398 4.524328 GCCATATTTTCCTTCAGGTATGGG 59.476 45.833 16.57 7.42 39.30 4.00
398 399 5.139727 TGCCATATTTTCCTTCAGGTATGG 58.860 41.667 12.84 12.84 40.67 2.74
399 400 6.906157 ATGCCATATTTTCCTTCAGGTATG 57.094 37.500 0.00 0.00 36.34 2.39
400 401 7.564660 TCAAATGCCATATTTTCCTTCAGGTAT 59.435 33.333 0.00 0.00 36.34 2.73
401 402 6.894654 TCAAATGCCATATTTTCCTTCAGGTA 59.105 34.615 0.00 0.00 36.34 3.08
402 403 5.721000 TCAAATGCCATATTTTCCTTCAGGT 59.279 36.000 0.00 0.00 36.34 4.00
403 404 6.224665 TCAAATGCCATATTTTCCTTCAGG 57.775 37.500 0.00 0.00 0.00 3.86
404 405 7.549839 TCTTCAAATGCCATATTTTCCTTCAG 58.450 34.615 0.00 0.00 0.00 3.02
405 406 7.479352 TCTTCAAATGCCATATTTTCCTTCA 57.521 32.000 0.00 0.00 0.00 3.02
406 407 8.199449 TCATCTTCAAATGCCATATTTTCCTTC 58.801 33.333 0.00 0.00 0.00 3.46
407 408 8.081517 TCATCTTCAAATGCCATATTTTCCTT 57.918 30.769 0.00 0.00 0.00 3.36
408 409 7.664552 TCATCTTCAAATGCCATATTTTCCT 57.335 32.000 0.00 0.00 0.00 3.36
413 414 8.467598 GCTGATATCATCTTCAAATGCCATATT 58.532 33.333 5.72 0.00 0.00 1.28
414 415 7.201705 CGCTGATATCATCTTCAAATGCCATAT 60.202 37.037 5.72 0.00 0.00 1.78
415 416 6.093082 CGCTGATATCATCTTCAAATGCCATA 59.907 38.462 5.72 0.00 0.00 2.74
416 417 5.106277 CGCTGATATCATCTTCAAATGCCAT 60.106 40.000 5.72 0.00 0.00 4.40
417 418 4.214758 CGCTGATATCATCTTCAAATGCCA 59.785 41.667 5.72 0.00 0.00 4.92
418 419 4.379186 CCGCTGATATCATCTTCAAATGCC 60.379 45.833 5.72 0.00 0.00 4.40
419 420 4.379186 CCCGCTGATATCATCTTCAAATGC 60.379 45.833 5.72 1.91 0.00 3.56
420 421 4.155462 CCCCGCTGATATCATCTTCAAATG 59.845 45.833 5.72 0.00 0.00 2.32
421 422 4.202503 ACCCCGCTGATATCATCTTCAAAT 60.203 41.667 5.72 0.00 0.00 2.32
422 423 3.136443 ACCCCGCTGATATCATCTTCAAA 59.864 43.478 5.72 0.00 0.00 2.69
423 424 2.705658 ACCCCGCTGATATCATCTTCAA 59.294 45.455 5.72 0.00 0.00 2.69
424 425 2.037641 CACCCCGCTGATATCATCTTCA 59.962 50.000 5.72 0.00 0.00 3.02
425 426 2.613977 CCACCCCGCTGATATCATCTTC 60.614 54.545 5.72 0.00 0.00 2.87
426 427 1.349026 CCACCCCGCTGATATCATCTT 59.651 52.381 5.72 0.00 0.00 2.40
427 428 0.979665 CCACCCCGCTGATATCATCT 59.020 55.000 5.72 0.00 0.00 2.90
428 429 0.976641 TCCACCCCGCTGATATCATC 59.023 55.000 5.72 0.54 0.00 2.92
429 430 0.687354 GTCCACCCCGCTGATATCAT 59.313 55.000 5.72 0.00 0.00 2.45
430 431 1.407656 GGTCCACCCCGCTGATATCA 61.408 60.000 5.07 5.07 0.00 2.15
431 432 1.371558 GGTCCACCCCGCTGATATC 59.628 63.158 0.00 0.00 0.00 1.63
432 433 2.507854 CGGTCCACCCCGCTGATAT 61.508 63.158 0.00 0.00 41.78 1.63
433 434 3.151710 CGGTCCACCCCGCTGATA 61.152 66.667 0.00 0.00 41.78 2.15
440 441 3.254617 AAGTTCCCGGTCCACCCC 61.255 66.667 0.00 0.00 0.00 4.95
441 442 2.033602 CAAGTTCCCGGTCCACCC 59.966 66.667 0.00 0.00 0.00 4.61
442 443 1.599797 CACAAGTTCCCGGTCCACC 60.600 63.158 0.00 0.00 0.00 4.61
443 444 0.464916 AACACAAGTTCCCGGTCCAC 60.465 55.000 0.00 0.00 30.46 4.02
444 445 0.179040 GAACACAAGTTCCCGGTCCA 60.179 55.000 0.00 0.00 46.68 4.02
445 446 2.625375 GAACACAAGTTCCCGGTCC 58.375 57.895 0.00 0.00 46.68 4.46
453 454 9.659830 GAACAAAATTACGATAGAACACAAGTT 57.340 29.630 0.00 0.00 41.64 2.66
454 455 8.287503 GGAACAAAATTACGATAGAACACAAGT 58.712 33.333 0.00 0.00 41.38 3.16
455 456 7.477422 CGGAACAAAATTACGATAGAACACAAG 59.523 37.037 0.00 0.00 41.38 3.16
456 457 7.171167 TCGGAACAAAATTACGATAGAACACAA 59.829 33.333 0.00 0.00 41.38 3.33
457 458 6.645827 TCGGAACAAAATTACGATAGAACACA 59.354 34.615 0.00 0.00 41.38 3.72
458 459 7.052565 TCGGAACAAAATTACGATAGAACAC 57.947 36.000 0.00 0.00 41.38 3.32
459 460 7.360269 GGTTCGGAACAAAATTACGATAGAACA 60.360 37.037 21.36 0.00 41.38 3.18
460 461 6.957635 GGTTCGGAACAAAATTACGATAGAAC 59.042 38.462 21.36 0.00 41.38 3.01
461 462 6.183360 CGGTTCGGAACAAAATTACGATAGAA 60.183 38.462 21.36 0.00 41.38 2.10
462 463 5.289193 CGGTTCGGAACAAAATTACGATAGA 59.711 40.000 21.36 0.00 41.38 1.98
463 464 5.062558 ACGGTTCGGAACAAAATTACGATAG 59.937 40.000 21.36 0.00 46.19 2.08
464 465 4.928615 ACGGTTCGGAACAAAATTACGATA 59.071 37.500 21.36 0.00 33.26 2.92
465 466 3.747529 ACGGTTCGGAACAAAATTACGAT 59.252 39.130 21.36 3.81 33.26 3.73
466 467 3.129871 ACGGTTCGGAACAAAATTACGA 58.870 40.909 21.36 0.00 0.00 3.43
467 468 3.472431 GACGGTTCGGAACAAAATTACG 58.528 45.455 21.36 15.34 0.00 3.18
468 469 3.250521 TGGACGGTTCGGAACAAAATTAC 59.749 43.478 21.36 6.27 0.00 1.89
469 470 3.474600 TGGACGGTTCGGAACAAAATTA 58.525 40.909 21.36 1.72 0.00 1.40
470 471 2.299521 TGGACGGTTCGGAACAAAATT 58.700 42.857 21.36 1.50 0.00 1.82
471 472 1.970092 TGGACGGTTCGGAACAAAAT 58.030 45.000 21.36 4.41 0.00 1.82
472 473 1.747709 TTGGACGGTTCGGAACAAAA 58.252 45.000 21.36 6.13 0.00 2.44
473 474 1.671845 CTTTGGACGGTTCGGAACAAA 59.328 47.619 21.36 11.93 0.00 2.83
474 475 1.301423 CTTTGGACGGTTCGGAACAA 58.699 50.000 21.36 5.06 0.00 2.83
475 476 0.533308 CCTTTGGACGGTTCGGAACA 60.533 55.000 21.36 0.00 0.00 3.18
476 477 1.232621 CCCTTTGGACGGTTCGGAAC 61.233 60.000 12.41 12.41 0.00 3.62
477 478 1.071814 CCCTTTGGACGGTTCGGAA 59.928 57.895 0.00 0.00 0.00 4.30
478 479 1.823169 CTCCCTTTGGACGGTTCGGA 61.823 60.000 0.00 0.00 35.03 4.55
479 480 1.375523 CTCCCTTTGGACGGTTCGG 60.376 63.158 0.00 0.00 35.03 4.30
480 481 2.033194 GCTCCCTTTGGACGGTTCG 61.033 63.158 0.00 0.00 35.03 3.95
481 482 0.536460 TTGCTCCCTTTGGACGGTTC 60.536 55.000 0.00 0.00 35.03 3.62
482 483 0.106419 TTTGCTCCCTTTGGACGGTT 60.106 50.000 0.00 0.00 35.03 4.44
483 484 0.537371 CTTTGCTCCCTTTGGACGGT 60.537 55.000 0.00 0.00 35.03 4.83
484 485 0.537371 ACTTTGCTCCCTTTGGACGG 60.537 55.000 0.00 0.00 35.03 4.79
485 486 2.076863 CTACTTTGCTCCCTTTGGACG 58.923 52.381 0.00 0.00 35.03 4.79
486 487 1.813178 GCTACTTTGCTCCCTTTGGAC 59.187 52.381 0.00 0.00 35.03 4.02
487 488 1.610624 CGCTACTTTGCTCCCTTTGGA 60.611 52.381 0.00 0.00 38.75 3.53
488 489 0.804989 CGCTACTTTGCTCCCTTTGG 59.195 55.000 0.00 0.00 0.00 3.28
489 490 1.464997 GACGCTACTTTGCTCCCTTTG 59.535 52.381 0.00 0.00 0.00 2.77
490 491 1.610886 GGACGCTACTTTGCTCCCTTT 60.611 52.381 0.00 0.00 0.00 3.11
491 492 0.036294 GGACGCTACTTTGCTCCCTT 60.036 55.000 0.00 0.00 0.00 3.95
492 493 1.597461 GGACGCTACTTTGCTCCCT 59.403 57.895 0.00 0.00 0.00 4.20
493 494 1.449778 GGGACGCTACTTTGCTCCC 60.450 63.158 0.00 0.00 40.45 4.30
494 495 4.203618 GGGACGCTACTTTGCTCC 57.796 61.111 0.00 0.00 32.98 4.70
531 532 0.666913 ATTTCCAGCATGCTGATCGC 59.333 50.000 42.21 4.89 46.30 4.58
532 533 1.674441 ACATTTCCAGCATGCTGATCG 59.326 47.619 42.21 27.99 46.30 3.69
533 534 3.795623 AACATTTCCAGCATGCTGATC 57.204 42.857 42.21 4.01 46.30 2.92
534 535 4.546829 AAAACATTTCCAGCATGCTGAT 57.453 36.364 42.21 27.62 46.30 2.90
535 536 4.339872 AAAAACATTTCCAGCATGCTGA 57.660 36.364 42.21 26.69 46.30 4.26
554 555 1.002251 CTCCAACAACCGCGCTAAAAA 60.002 47.619 5.56 0.00 0.00 1.94
555 556 0.589223 CTCCAACAACCGCGCTAAAA 59.411 50.000 5.56 0.00 0.00 1.52
556 557 0.249953 TCTCCAACAACCGCGCTAAA 60.250 50.000 5.56 0.00 0.00 1.85
557 558 0.036765 ATCTCCAACAACCGCGCTAA 60.037 50.000 5.56 0.00 0.00 3.09
558 559 0.739462 CATCTCCAACAACCGCGCTA 60.739 55.000 5.56 0.00 0.00 4.26
559 560 2.034879 CATCTCCAACAACCGCGCT 61.035 57.895 5.56 0.00 0.00 5.92
560 561 1.852067 AACATCTCCAACAACCGCGC 61.852 55.000 0.00 0.00 0.00 6.86
561 562 0.591170 AAACATCTCCAACAACCGCG 59.409 50.000 0.00 0.00 0.00 6.46
562 563 2.793278 AAAACATCTCCAACAACCGC 57.207 45.000 0.00 0.00 0.00 5.68
563 564 7.241376 GTCTATAAAAACATCTCCAACAACCG 58.759 38.462 0.00 0.00 0.00 4.44
564 565 7.094933 ACGTCTATAAAAACATCTCCAACAACC 60.095 37.037 0.00 0.00 0.00 3.77
565 566 7.744715 CACGTCTATAAAAACATCTCCAACAAC 59.255 37.037 0.00 0.00 0.00 3.32
566 567 7.094975 CCACGTCTATAAAAACATCTCCAACAA 60.095 37.037 0.00 0.00 0.00 2.83
567 568 6.370442 CCACGTCTATAAAAACATCTCCAACA 59.630 38.462 0.00 0.00 0.00 3.33
568 569 6.674760 GCCACGTCTATAAAAACATCTCCAAC 60.675 42.308 0.00 0.00 0.00 3.77
569 570 5.353123 GCCACGTCTATAAAAACATCTCCAA 59.647 40.000 0.00 0.00 0.00 3.53
570 571 4.873827 GCCACGTCTATAAAAACATCTCCA 59.126 41.667 0.00 0.00 0.00 3.86
571 572 4.025979 CGCCACGTCTATAAAAACATCTCC 60.026 45.833 0.00 0.00 0.00 3.71
572 573 4.550255 GCGCCACGTCTATAAAAACATCTC 60.550 45.833 0.00 0.00 0.00 2.75
573 574 3.308866 GCGCCACGTCTATAAAAACATCT 59.691 43.478 0.00 0.00 0.00 2.90
574 575 3.545426 GGCGCCACGTCTATAAAAACATC 60.545 47.826 24.80 0.00 0.00 3.06
575 576 2.353579 GGCGCCACGTCTATAAAAACAT 59.646 45.455 24.80 0.00 0.00 2.71
576 577 1.733360 GGCGCCACGTCTATAAAAACA 59.267 47.619 24.80 0.00 0.00 2.83
577 578 1.733360 TGGCGCCACGTCTATAAAAAC 59.267 47.619 29.03 0.00 30.55 2.43
578 579 1.733360 GTGGCGCCACGTCTATAAAAA 59.267 47.619 41.21 7.04 37.19 1.94
579 580 1.361793 GTGGCGCCACGTCTATAAAA 58.638 50.000 41.21 7.28 37.19 1.52
580 581 3.053662 GTGGCGCCACGTCTATAAA 57.946 52.632 41.21 7.90 37.19 1.40
658 659 1.874129 AGTCCATCCGGGTTGACATA 58.126 50.000 20.22 0.00 38.11 2.29
660 661 0.036164 CAAGTCCATCCGGGTTGACA 59.964 55.000 20.22 0.00 38.11 3.58
764 778 3.795924 ATGGGGAGGGGAGGGAGG 61.796 72.222 0.00 0.00 0.00 4.30
778 792 1.066573 AGCTGTGGAAACGAGAGATGG 60.067 52.381 0.00 0.00 0.00 3.51
790 804 2.957402 ACAAATTCAGGAGCTGTGGA 57.043 45.000 0.00 0.00 32.61 4.02
1436 1463 3.366724 TGAAGCAAGATAAACGCAGTACG 59.633 43.478 0.00 0.00 45.00 3.67
1437 1464 4.921470 TGAAGCAAGATAAACGCAGTAC 57.079 40.909 0.00 0.00 45.00 2.73
1441 1468 3.128589 GGGAATGAAGCAAGATAAACGCA 59.871 43.478 0.00 0.00 0.00 5.24
1442 1469 3.378427 AGGGAATGAAGCAAGATAAACGC 59.622 43.478 0.00 0.00 0.00 4.84
1444 1471 4.496507 GCGAGGGAATGAAGCAAGATAAAC 60.497 45.833 0.00 0.00 0.00 2.01
1445 1472 3.627577 GCGAGGGAATGAAGCAAGATAAA 59.372 43.478 0.00 0.00 0.00 1.40
1478 1505 0.394488 CTCTCCGGTCAGGTAGCTGA 60.394 60.000 20.43 20.43 41.99 4.26
2045 2112 1.777101 CGGAAGAAGAGATCGATGGC 58.223 55.000 0.54 0.00 0.00 4.40
2169 2236 5.890752 ACACTTCTGATCTGATCCATGAT 57.109 39.130 14.71 0.00 0.00 2.45
2273 2778 3.757248 ATCGACAAGGATGCCGGCC 62.757 63.158 26.77 9.46 32.82 6.13
2274 2779 1.819632 AATCGACAAGGATGCCGGC 60.820 57.895 22.73 22.73 32.82 6.13
2275 2780 0.461870 TCAATCGACAAGGATGCCGG 60.462 55.000 0.00 0.00 32.82 6.13
2276 2781 1.586422 ATCAATCGACAAGGATGCCG 58.414 50.000 0.00 0.00 33.30 5.69
2328 2833 0.248012 AGGTCACGAACACACACACA 59.752 50.000 0.00 0.00 0.00 3.72
2329 2834 0.928229 GAGGTCACGAACACACACAC 59.072 55.000 0.00 0.00 0.00 3.82
2330 2835 0.533032 TGAGGTCACGAACACACACA 59.467 50.000 0.00 0.00 0.00 3.72
2331 2836 1.647346 TTGAGGTCACGAACACACAC 58.353 50.000 0.00 0.00 0.00 3.82
2332 2837 2.613026 ATTGAGGTCACGAACACACA 57.387 45.000 0.00 0.00 0.00 3.72
2333 2838 3.311322 TGAAATTGAGGTCACGAACACAC 59.689 43.478 0.00 0.00 0.00 3.82
2403 2908 2.006888 CGGCGGTCACATAATCACTTT 58.993 47.619 0.00 0.00 0.00 2.66
2405 2910 0.179084 CCGGCGGTCACATAATCACT 60.179 55.000 19.97 0.00 0.00 3.41
2407 2912 1.522806 GCCGGCGGTCACATAATCA 60.523 57.895 28.82 0.00 0.00 2.57
2441 2947 1.079503 GGCCTTTGAAGACGCTACTG 58.920 55.000 0.00 0.00 0.00 2.74
2443 2949 1.809684 AAGGCCTTTGAAGACGCTAC 58.190 50.000 13.78 0.00 0.00 3.58
2444 2950 2.561478 AAAGGCCTTTGAAGACGCTA 57.439 45.000 29.91 0.00 0.00 4.26
2445 2951 1.692411 AAAAGGCCTTTGAAGACGCT 58.308 45.000 31.02 10.26 32.36 5.07
2446 2952 2.509052 AAAAAGGCCTTTGAAGACGC 57.491 45.000 31.02 0.00 32.36 5.19
2589 3095 1.792301 CGACGAGAACAGCCGAGTA 59.208 57.895 0.00 0.00 0.00 2.59
2634 3141 2.515991 GCATTGATTCCCCCGCGA 60.516 61.111 8.23 0.00 0.00 5.87
2682 3189 0.107508 CGTGAGGCATCAATGGAGGT 60.108 55.000 0.92 0.00 37.14 3.85
2840 3350 3.612607 AGAGGGAGGAACGGGGGT 61.613 66.667 0.00 0.00 0.00 4.95
2960 3470 3.574826 GGTAATCGGCCTCATAGAGAAGT 59.425 47.826 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.