Multiple sequence alignment - TraesCS6D01G169000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G169000 chr6D 100.000 5944 0 0 1 5944 154599285 154593342 0.000000e+00 10977.0
1 TraesCS6D01G169000 chr6D 81.303 353 59 5 1 347 18192992 18192641 4.540000e-71 279.0
2 TraesCS6D01G169000 chr6D 77.577 388 59 20 3087 3467 218423281 218422915 6.040000e-50 209.0
3 TraesCS6D01G169000 chr6D 87.273 110 13 1 2901 3009 218423387 218423278 2.250000e-24 124.0
4 TraesCS6D01G169000 chr6D 88.350 103 8 1 5696 5798 154593494 154593396 2.910000e-23 121.0
5 TraesCS6D01G169000 chr6D 88.350 103 8 1 5792 5890 154593590 154593488 2.910000e-23 121.0
6 TraesCS6D01G169000 chr6D 93.182 44 3 0 3422 3465 67511769 67511726 1.380000e-06 65.8
7 TraesCS6D01G169000 chr6B 95.163 2460 75 21 351 2797 278125382 278127810 0.000000e+00 3843.0
8 TraesCS6D01G169000 chr6B 95.833 1872 49 12 3697 5562 278128643 278130491 0.000000e+00 2998.0
9 TraesCS6D01G169000 chr6B 97.421 349 6 2 3083 3428 278128098 278128446 5.130000e-165 592.0
10 TraesCS6D01G169000 chr6B 97.222 216 6 0 2794 3009 278127890 278128105 3.380000e-97 366.0
11 TraesCS6D01G169000 chr6B 96.667 180 4 1 3470 3647 278128452 278128631 1.250000e-76 298.0
12 TraesCS6D01G169000 chr6B 80.992 363 59 7 1 357 681080074 681080432 4.540000e-71 279.0
13 TraesCS6D01G169000 chr6B 75.457 383 67 16 3088 3467 343006272 343006630 1.710000e-35 161.0
14 TraesCS6D01G169000 chr6B 88.550 131 12 2 2873 3000 343006135 343006265 7.980000e-34 156.0
15 TraesCS6D01G169000 chr6B 91.089 101 2 2 5792 5891 278130698 278130792 4.830000e-26 130.0
16 TraesCS6D01G169000 chr6B 92.222 90 3 2 5685 5774 278130687 278130772 2.250000e-24 124.0
17 TraesCS6D01G169000 chr6B 90.909 44 4 0 3422 3465 142454627 142454584 6.430000e-05 60.2
18 TraesCS6D01G169000 chr6A 95.924 2110 55 10 3083 5181 208118681 208120770 0.000000e+00 3391.0
19 TraesCS6D01G169000 chr6A 95.279 1398 37 12 480 1862 208116073 208117456 0.000000e+00 2189.0
20 TraesCS6D01G169000 chr6A 96.357 1153 37 5 1860 3009 208117538 208118688 0.000000e+00 1892.0
21 TraesCS6D01G169000 chr6A 90.483 746 40 11 5178 5906 208120922 208121653 0.000000e+00 955.0
22 TraesCS6D01G169000 chr6A 84.765 361 51 2 1 357 8866602 8866962 5.660000e-95 359.0
23 TraesCS6D01G169000 chr6A 100.000 39 0 0 3045 3083 594732174 594732212 8.260000e-09 73.1
24 TraesCS6D01G169000 chr6A 93.182 44 3 0 3422 3465 84981002 84980959 1.380000e-06 65.8
25 TraesCS6D01G169000 chr1D 86.842 342 27 6 3088 3428 466358411 466358735 3.380000e-97 366.0
26 TraesCS6D01G169000 chr1D 83.898 118 15 4 2874 2991 313564899 313565012 6.300000e-20 110.0
27 TraesCS6D01G169000 chr3D 80.556 504 67 22 5179 5654 29711236 29710736 5.660000e-95 359.0
28 TraesCS6D01G169000 chr3D 77.966 236 40 10 3083 3315 177367733 177367507 2.890000e-28 137.0
29 TraesCS6D01G169000 chr3D 85.246 122 15 3 2872 2991 424591714 424591834 8.090000e-24 122.0
30 TraesCS6D01G169000 chr2D 81.267 363 61 6 1 357 222599842 222599481 2.710000e-73 287.0
31 TraesCS6D01G169000 chr2D 80.165 363 66 5 1 357 178528433 178528795 3.530000e-67 267.0
32 TraesCS6D01G169000 chr2D 79.775 356 64 6 1 348 178696164 178696519 9.890000e-63 252.0
33 TraesCS6D01G169000 chr2B 81.215 362 62 5 1 357 345458569 345458209 2.710000e-73 287.0
34 TraesCS6D01G169000 chr2B 80.165 363 66 5 1 357 235903990 235904352 3.530000e-67 267.0
35 TraesCS6D01G169000 chr2B 98.113 53 0 1 3034 3086 47660914 47660863 2.280000e-14 91.6
36 TraesCS6D01G169000 chr7A 79.695 394 56 17 3084 3469 670258679 670259056 4.570000e-66 263.0
37 TraesCS6D01G169000 chr7A 76.852 324 58 11 2410 2720 550298194 550298513 3.680000e-37 167.0
38 TraesCS6D01G169000 chr5D 80.226 354 64 6 1 349 428167300 428167652 1.640000e-65 261.0
39 TraesCS6D01G169000 chr5D 76.227 387 59 15 3083 3465 9940947 9941304 2.200000e-39 174.0
40 TraesCS6D01G169000 chrUn 87.113 194 12 6 3279 3472 21281970 21281790 2.170000e-49 207.0
41 TraesCS6D01G169000 chr7D 78.070 342 53 14 3088 3427 4243651 4243972 4.700000e-46 196.0
42 TraesCS6D01G169000 chr7D 76.852 324 58 11 2410 2720 483918893 483919212 3.680000e-37 167.0
43 TraesCS6D01G169000 chr2A 76.658 407 49 31 3079 3470 706211540 706211915 3.660000e-42 183.0
44 TraesCS6D01G169000 chr2A 100.000 49 0 0 3034 3082 515306274 515306322 2.280000e-14 91.6
45 TraesCS6D01G169000 chr7B 76.852 324 58 11 2410 2720 509564251 509564570 3.680000e-37 167.0
46 TraesCS6D01G169000 chr7B 86.139 101 13 1 2878 2977 3148892 3148792 2.270000e-19 108.0
47 TraesCS6D01G169000 chr7B 86.022 93 12 1 2881 2972 601324486 601324578 1.360000e-16 99.0
48 TraesCS6D01G169000 chr7B 100.000 34 0 0 3051 3084 480002007 480002040 4.970000e-06 63.9
49 TraesCS6D01G169000 chr3B 75.635 394 61 18 3083 3466 181296120 181295752 4.770000e-36 163.0
50 TraesCS6D01G169000 chr3B 100.000 46 0 0 3037 3082 236507736 236507691 1.060000e-12 86.1
51 TraesCS6D01G169000 chr3B 85.333 75 6 2 3009 3078 481313682 481313608 8.260000e-09 73.1
52 TraesCS6D01G169000 chr5B 74.103 390 64 24 3083 3465 10096730 10097089 6.250000e-25 126.0
53 TraesCS6D01G169000 chr3A 83.486 109 15 1 5796 5901 565371007 565370899 1.360000e-16 99.0
54 TraesCS6D01G169000 chr5A 98.000 50 0 1 3034 3082 631667496 631667545 1.060000e-12 86.1
55 TraesCS6D01G169000 chr5A 100.000 38 0 0 3045 3082 332289201 332289238 2.970000e-08 71.3
56 TraesCS6D01G169000 chr1A 98.000 50 0 1 3034 3082 583933327 583933376 1.060000e-12 86.1
57 TraesCS6D01G169000 chr1A 79.661 118 21 3 2876 2993 393493778 393493892 1.370000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G169000 chr6D 154593342 154599285 5943 True 10977.00 10977 100.000000 1 5944 1 chr6D.!!$R3 5943
1 TraesCS6D01G169000 chr6B 278125382 278130792 5410 False 1193.00 3843 95.088143 351 5891 7 chr6B.!!$F2 5540
2 TraesCS6D01G169000 chr6A 208116073 208121653 5580 False 2106.75 3391 94.510750 480 5906 4 chr6A.!!$F3 5426
3 TraesCS6D01G169000 chr3D 29710736 29711236 500 True 359.00 359 80.556000 5179 5654 1 chr3D.!!$R1 475

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 108 0.027716 CATAGACGTGGACTCCGACG 59.972 60.0 14.71 14.71 41.41 5.12 F
108 109 0.107993 ATAGACGTGGACTCCGACGA 60.108 55.0 20.22 5.30 38.94 4.20 F
114 115 0.242825 GTGGACTCCGACGACATCAA 59.757 55.0 0.00 0.00 0.00 2.57 F
481 482 0.466555 AGCCTAGCCAGGACGACTAG 60.467 60.0 0.85 0.00 45.91 2.57 F
1359 1380 0.819582 GTGGTGCCAATCTCCAATGG 59.180 55.0 0.00 0.00 39.78 3.16 F
3037 3229 0.822164 TAAGGCGTCTGTAAGGAGGC 59.178 55.0 0.00 0.00 43.63 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1673 1695 1.165907 CCTGTTCCGTGCAAGCAGAA 61.166 55.000 7.19 0.00 0.00 3.02 R
2038 2145 2.902523 ACACTAGATCTGCACATGCTG 58.097 47.619 5.18 4.87 42.66 4.41 R
2041 2148 3.048501 CGCTACACTAGATCTGCACATG 58.951 50.000 5.18 0.00 0.00 3.21 R
2077 2184 5.360999 AGTGATCATTCGGACTTGATACTCA 59.639 40.000 0.00 0.00 32.84 3.41 R
3043 3235 0.109132 CTTTGCTTTAAGGCGCTGGG 60.109 55.000 7.64 0.00 34.52 4.45 R
4958 5162 1.271163 ACCCCAGACAATACCAACACG 60.271 52.381 0.00 0.00 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.853104 AAATCGATTGGTGCGGAGA 57.147 47.368 12.25 0.00 0.00 3.71
19 20 2.332063 AAATCGATTGGTGCGGAGAT 57.668 45.000 12.25 0.00 0.00 2.75
20 21 1.586422 AATCGATTGGTGCGGAGATG 58.414 50.000 10.50 0.00 0.00 2.90
21 22 0.882042 ATCGATTGGTGCGGAGATGC 60.882 55.000 0.00 0.00 0.00 3.91
22 23 2.874694 CGATTGGTGCGGAGATGCG 61.875 63.158 0.00 0.00 37.81 4.73
23 24 3.173390 GATTGGTGCGGAGATGCGC 62.173 63.158 12.03 12.03 44.48 6.09
24 25 3.687321 ATTGGTGCGGAGATGCGCT 62.687 57.895 19.26 0.00 44.60 5.92
25 26 3.899981 TTGGTGCGGAGATGCGCTT 62.900 57.895 19.26 0.55 44.60 4.68
26 27 2.202878 GGTGCGGAGATGCGCTTA 60.203 61.111 19.26 0.00 44.60 3.09
27 28 1.595382 GGTGCGGAGATGCGCTTAT 60.595 57.895 19.26 0.00 44.60 1.73
28 29 1.566563 GTGCGGAGATGCGCTTATG 59.433 57.895 19.26 0.00 42.01 1.90
29 30 0.875908 GTGCGGAGATGCGCTTATGA 60.876 55.000 19.26 0.00 42.01 2.15
30 31 0.875908 TGCGGAGATGCGCTTATGAC 60.876 55.000 19.26 0.00 37.81 3.06
31 32 1.560860 GCGGAGATGCGCTTATGACC 61.561 60.000 9.73 3.94 0.00 4.02
32 33 1.278172 CGGAGATGCGCTTATGACCG 61.278 60.000 9.73 12.47 0.00 4.79
33 34 0.032130 GGAGATGCGCTTATGACCGA 59.968 55.000 9.73 0.00 0.00 4.69
34 35 1.413382 GAGATGCGCTTATGACCGAG 58.587 55.000 9.73 0.00 0.00 4.63
35 36 1.001268 GAGATGCGCTTATGACCGAGA 60.001 52.381 9.73 0.00 0.00 4.04
36 37 1.409064 AGATGCGCTTATGACCGAGAA 59.591 47.619 9.73 0.00 0.00 2.87
37 38 2.159099 AGATGCGCTTATGACCGAGAAA 60.159 45.455 9.73 0.00 0.00 2.52
38 39 1.355971 TGCGCTTATGACCGAGAAAC 58.644 50.000 9.73 0.00 0.00 2.78
39 40 1.337354 TGCGCTTATGACCGAGAAACA 60.337 47.619 9.73 0.00 0.00 2.83
40 41 1.933853 GCGCTTATGACCGAGAAACAT 59.066 47.619 0.00 0.00 0.00 2.71
41 42 2.285834 GCGCTTATGACCGAGAAACATG 60.286 50.000 0.00 0.00 0.00 3.21
42 43 2.285834 CGCTTATGACCGAGAAACATGC 60.286 50.000 0.00 0.00 0.00 4.06
43 44 2.032178 GCTTATGACCGAGAAACATGCC 59.968 50.000 0.00 0.00 0.00 4.40
44 45 3.535561 CTTATGACCGAGAAACATGCCT 58.464 45.455 0.00 0.00 0.00 4.75
45 46 2.496899 ATGACCGAGAAACATGCCTT 57.503 45.000 0.00 0.00 0.00 4.35
46 47 3.627395 ATGACCGAGAAACATGCCTTA 57.373 42.857 0.00 0.00 0.00 2.69
47 48 3.410631 TGACCGAGAAACATGCCTTAA 57.589 42.857 0.00 0.00 0.00 1.85
48 49 3.745799 TGACCGAGAAACATGCCTTAAA 58.254 40.909 0.00 0.00 0.00 1.52
49 50 4.138290 TGACCGAGAAACATGCCTTAAAA 58.862 39.130 0.00 0.00 0.00 1.52
50 51 4.764823 TGACCGAGAAACATGCCTTAAAAT 59.235 37.500 0.00 0.00 0.00 1.82
51 52 5.242838 TGACCGAGAAACATGCCTTAAAATT 59.757 36.000 0.00 0.00 0.00 1.82
52 53 6.096673 ACCGAGAAACATGCCTTAAAATTT 57.903 33.333 0.00 0.00 0.00 1.82
53 54 5.925969 ACCGAGAAACATGCCTTAAAATTTG 59.074 36.000 0.00 0.00 0.00 2.32
54 55 5.348451 CCGAGAAACATGCCTTAAAATTTGG 59.652 40.000 0.00 0.00 0.00 3.28
55 56 5.925969 CGAGAAACATGCCTTAAAATTTGGT 59.074 36.000 0.00 0.00 0.00 3.67
56 57 6.089417 CGAGAAACATGCCTTAAAATTTGGTC 59.911 38.462 0.00 0.00 0.00 4.02
57 58 7.066307 AGAAACATGCCTTAAAATTTGGTCT 57.934 32.000 0.00 0.00 0.00 3.85
58 59 7.154656 AGAAACATGCCTTAAAATTTGGTCTC 58.845 34.615 0.00 0.00 0.00 3.36
59 60 6.418057 AACATGCCTTAAAATTTGGTCTCA 57.582 33.333 0.00 0.00 0.00 3.27
60 61 6.418057 ACATGCCTTAAAATTTGGTCTCAA 57.582 33.333 0.00 0.00 0.00 3.02
61 62 7.008021 ACATGCCTTAAAATTTGGTCTCAAT 57.992 32.000 0.00 0.00 32.28 2.57
62 63 7.452562 ACATGCCTTAAAATTTGGTCTCAATT 58.547 30.769 0.00 0.00 32.28 2.32
63 64 7.938490 ACATGCCTTAAAATTTGGTCTCAATTT 59.062 29.630 0.00 0.00 32.28 1.82
64 65 7.727331 TGCCTTAAAATTTGGTCTCAATTTG 57.273 32.000 0.00 0.00 32.28 2.32
65 66 6.709846 TGCCTTAAAATTTGGTCTCAATTTGG 59.290 34.615 0.00 0.00 32.28 3.28
66 67 6.348458 GCCTTAAAATTTGGTCTCAATTTGGC 60.348 38.462 0.00 0.00 32.28 4.52
67 68 6.709846 CCTTAAAATTTGGTCTCAATTTGGCA 59.290 34.615 0.00 0.00 32.28 4.92
68 69 7.228308 CCTTAAAATTTGGTCTCAATTTGGCAA 59.772 33.333 0.00 0.00 32.28 4.52
69 70 6.375945 AAAATTTGGTCTCAATTTGGCAAC 57.624 33.333 0.00 0.00 32.28 4.17
70 71 4.961438 ATTTGGTCTCAATTTGGCAACT 57.039 36.364 0.00 0.00 32.28 3.16
71 72 4.320608 TTTGGTCTCAATTTGGCAACTC 57.679 40.909 0.00 0.00 32.28 3.01
72 73 2.238521 TGGTCTCAATTTGGCAACTCC 58.761 47.619 0.00 0.00 37.61 3.85
73 74 2.238521 GGTCTCAATTTGGCAACTCCA 58.761 47.619 0.00 0.00 44.85 3.86
80 81 3.166434 TGGCAACTCCAATCGGGT 58.834 55.556 0.00 0.00 43.21 5.28
81 82 1.303236 TGGCAACTCCAATCGGGTG 60.303 57.895 0.00 0.00 43.21 4.61
82 83 1.303317 GGCAACTCCAATCGGGTGT 60.303 57.895 0.00 0.00 45.09 4.16
83 84 0.035820 GGCAACTCCAATCGGGTGTA 60.036 55.000 0.00 0.00 42.43 2.90
84 85 1.612199 GGCAACTCCAATCGGGTGTAA 60.612 52.381 0.00 0.00 42.43 2.41
85 86 1.467342 GCAACTCCAATCGGGTGTAAC 59.533 52.381 0.00 0.00 42.43 2.50
98 99 1.274596 GTGTAACCGCATAGACGTGG 58.725 55.000 0.00 0.00 42.55 4.94
99 100 1.135315 GTGTAACCGCATAGACGTGGA 60.135 52.381 0.00 0.00 38.98 4.02
100 101 1.135315 TGTAACCGCATAGACGTGGAC 60.135 52.381 0.00 0.00 38.98 4.02
101 102 1.133790 GTAACCGCATAGACGTGGACT 59.866 52.381 0.00 0.00 38.98 3.85
102 103 0.172803 AACCGCATAGACGTGGACTC 59.827 55.000 0.00 0.00 38.98 3.36
103 104 1.065928 CCGCATAGACGTGGACTCC 59.934 63.158 0.00 0.00 38.98 3.85
104 105 1.298413 CGCATAGACGTGGACTCCG 60.298 63.158 0.00 0.00 0.00 4.63
105 106 1.712018 CGCATAGACGTGGACTCCGA 61.712 60.000 0.00 0.00 0.00 4.55
106 107 0.248539 GCATAGACGTGGACTCCGAC 60.249 60.000 0.00 0.00 0.00 4.79
107 108 0.027716 CATAGACGTGGACTCCGACG 59.972 60.000 14.71 14.71 41.41 5.12
108 109 0.107993 ATAGACGTGGACTCCGACGA 60.108 55.000 20.22 5.30 38.94 4.20
109 110 1.016130 TAGACGTGGACTCCGACGAC 61.016 60.000 20.22 15.78 38.94 4.34
110 111 2.592574 ACGTGGACTCCGACGACA 60.593 61.111 20.22 0.00 38.94 4.35
111 112 1.919956 GACGTGGACTCCGACGACAT 61.920 60.000 20.22 4.91 38.94 3.06
112 113 1.226323 CGTGGACTCCGACGACATC 60.226 63.158 12.21 0.00 37.81 3.06
113 114 1.880894 GTGGACTCCGACGACATCA 59.119 57.895 0.00 0.00 0.00 3.07
114 115 0.242825 GTGGACTCCGACGACATCAA 59.757 55.000 0.00 0.00 0.00 2.57
115 116 0.963225 TGGACTCCGACGACATCAAA 59.037 50.000 0.00 0.00 0.00 2.69
116 117 1.067846 TGGACTCCGACGACATCAAAG 60.068 52.381 0.00 0.00 0.00 2.77
117 118 1.067776 GGACTCCGACGACATCAAAGT 60.068 52.381 0.00 0.00 0.00 2.66
118 119 1.986378 GACTCCGACGACATCAAAGTG 59.014 52.381 0.00 0.00 0.00 3.16
119 120 1.611977 ACTCCGACGACATCAAAGTGA 59.388 47.619 0.00 0.00 0.00 3.41
120 121 1.986378 CTCCGACGACATCAAAGTGAC 59.014 52.381 0.00 0.00 0.00 3.67
121 122 1.338655 TCCGACGACATCAAAGTGACA 59.661 47.619 0.00 0.00 0.00 3.58
122 123 1.721389 CCGACGACATCAAAGTGACAG 59.279 52.381 0.00 0.00 0.00 3.51
123 124 2.607038 CCGACGACATCAAAGTGACAGA 60.607 50.000 0.00 0.00 0.00 3.41
124 125 2.658802 CGACGACATCAAAGTGACAGAG 59.341 50.000 0.00 0.00 0.00 3.35
125 126 3.609409 CGACGACATCAAAGTGACAGAGA 60.609 47.826 0.00 0.00 0.00 3.10
126 127 4.299155 GACGACATCAAAGTGACAGAGAA 58.701 43.478 0.00 0.00 0.00 2.87
127 128 4.693283 ACGACATCAAAGTGACAGAGAAA 58.307 39.130 0.00 0.00 0.00 2.52
128 129 5.116180 ACGACATCAAAGTGACAGAGAAAA 58.884 37.500 0.00 0.00 0.00 2.29
129 130 5.006746 ACGACATCAAAGTGACAGAGAAAAC 59.993 40.000 0.00 0.00 0.00 2.43
130 131 5.235186 CGACATCAAAGTGACAGAGAAAACT 59.765 40.000 0.00 0.00 0.00 2.66
131 132 6.420903 CGACATCAAAGTGACAGAGAAAACTA 59.579 38.462 0.00 0.00 0.00 2.24
132 133 7.042725 CGACATCAAAGTGACAGAGAAAACTAA 60.043 37.037 0.00 0.00 0.00 2.24
133 134 8.147642 ACATCAAAGTGACAGAGAAAACTAAG 57.852 34.615 0.00 0.00 0.00 2.18
134 135 7.987458 ACATCAAAGTGACAGAGAAAACTAAGA 59.013 33.333 0.00 0.00 0.00 2.10
135 136 8.830580 CATCAAAGTGACAGAGAAAACTAAGAA 58.169 33.333 0.00 0.00 0.00 2.52
136 137 8.964476 TCAAAGTGACAGAGAAAACTAAGAAT 57.036 30.769 0.00 0.00 0.00 2.40
137 138 8.830580 TCAAAGTGACAGAGAAAACTAAGAATG 58.169 33.333 0.00 0.00 0.00 2.67
138 139 7.736447 AAGTGACAGAGAAAACTAAGAATGG 57.264 36.000 0.00 0.00 0.00 3.16
139 140 7.067496 AGTGACAGAGAAAACTAAGAATGGA 57.933 36.000 0.00 0.00 0.00 3.41
140 141 7.158021 AGTGACAGAGAAAACTAAGAATGGAG 58.842 38.462 0.00 0.00 0.00 3.86
141 142 6.370166 GTGACAGAGAAAACTAAGAATGGAGG 59.630 42.308 0.00 0.00 0.00 4.30
142 143 6.043243 TGACAGAGAAAACTAAGAATGGAGGT 59.957 38.462 0.00 0.00 0.00 3.85
143 144 6.468543 ACAGAGAAAACTAAGAATGGAGGTC 58.531 40.000 0.00 0.00 0.00 3.85
144 145 6.271159 ACAGAGAAAACTAAGAATGGAGGTCT 59.729 38.462 0.00 0.00 0.00 3.85
145 146 6.816140 CAGAGAAAACTAAGAATGGAGGTCTC 59.184 42.308 0.00 0.00 0.00 3.36
146 147 6.728632 AGAGAAAACTAAGAATGGAGGTCTCT 59.271 38.462 0.00 0.00 0.00 3.10
147 148 6.941857 AGAAAACTAAGAATGGAGGTCTCTC 58.058 40.000 0.00 0.00 39.25 3.20
148 149 6.728632 AGAAAACTAAGAATGGAGGTCTCTCT 59.271 38.462 0.00 0.00 39.86 3.10
149 150 6.943899 AAACTAAGAATGGAGGTCTCTCTT 57.056 37.500 6.33 6.33 39.86 2.85
150 151 6.943899 AACTAAGAATGGAGGTCTCTCTTT 57.056 37.500 6.37 0.00 39.86 2.52
151 152 6.538945 ACTAAGAATGGAGGTCTCTCTTTC 57.461 41.667 6.37 6.62 39.86 2.62
152 153 4.464069 AAGAATGGAGGTCTCTCTTTCG 57.536 45.455 0.00 0.00 39.86 3.46
153 154 3.702792 AGAATGGAGGTCTCTCTTTCGA 58.297 45.455 0.00 0.00 39.86 3.71
154 155 4.285863 AGAATGGAGGTCTCTCTTTCGAT 58.714 43.478 0.00 0.00 39.86 3.59
155 156 4.340950 AGAATGGAGGTCTCTCTTTCGATC 59.659 45.833 0.00 0.00 39.86 3.69
156 157 3.374042 TGGAGGTCTCTCTTTCGATCT 57.626 47.619 0.00 0.00 39.86 2.75
157 158 4.505324 TGGAGGTCTCTCTTTCGATCTA 57.495 45.455 0.00 0.00 39.86 1.98
158 159 5.055265 TGGAGGTCTCTCTTTCGATCTAT 57.945 43.478 0.00 0.00 39.86 1.98
159 160 5.067273 TGGAGGTCTCTCTTTCGATCTATC 58.933 45.833 0.00 0.00 39.86 2.08
160 161 4.153475 GGAGGTCTCTCTTTCGATCTATCG 59.847 50.000 6.01 6.01 43.94 2.92
161 162 4.153475 GAGGTCTCTCTTTCGATCTATCGG 59.847 50.000 12.09 0.00 42.13 4.18
162 163 7.318689 GAGGTCTCTCTTTCGATCTATCGGC 62.319 52.000 12.09 0.00 42.13 5.54
175 176 7.916128 CGATCTATCGGCGATAATTTTAGAT 57.084 36.000 27.52 25.22 45.93 1.98
176 177 7.768812 CGATCTATCGGCGATAATTTTAGATG 58.231 38.462 26.43 17.56 45.93 2.90
177 178 7.644157 CGATCTATCGGCGATAATTTTAGATGA 59.356 37.037 26.43 18.78 45.93 2.92
178 179 9.469807 GATCTATCGGCGATAATTTTAGATGAT 57.530 33.333 26.43 21.66 0.00 2.45
204 205 3.648339 TCCTTGCTTGTGATTTCTTGC 57.352 42.857 0.00 0.00 0.00 4.01
205 206 2.957680 TCCTTGCTTGTGATTTCTTGCA 59.042 40.909 0.00 0.00 0.00 4.08
206 207 3.575256 TCCTTGCTTGTGATTTCTTGCAT 59.425 39.130 0.00 0.00 0.00 3.96
207 208 4.766373 TCCTTGCTTGTGATTTCTTGCATA 59.234 37.500 0.00 0.00 0.00 3.14
208 209 5.419788 TCCTTGCTTGTGATTTCTTGCATAT 59.580 36.000 0.00 0.00 0.00 1.78
209 210 6.071221 TCCTTGCTTGTGATTTCTTGCATATT 60.071 34.615 0.00 0.00 0.00 1.28
210 211 7.122501 TCCTTGCTTGTGATTTCTTGCATATTA 59.877 33.333 0.00 0.00 0.00 0.98
211 212 7.924412 CCTTGCTTGTGATTTCTTGCATATTAT 59.076 33.333 0.00 0.00 0.00 1.28
212 213 9.309516 CTTGCTTGTGATTTCTTGCATATTATT 57.690 29.630 0.00 0.00 0.00 1.40
213 214 9.656040 TTGCTTGTGATTTCTTGCATATTATTT 57.344 25.926 0.00 0.00 0.00 1.40
214 215 9.656040 TGCTTGTGATTTCTTGCATATTATTTT 57.344 25.926 0.00 0.00 0.00 1.82
223 224 9.820725 TTTCTTGCATATTATTTTTAGCATGCT 57.179 25.926 25.99 25.99 39.53 3.79
224 225 9.820725 TTCTTGCATATTATTTTTAGCATGCTT 57.179 25.926 28.02 10.09 39.53 3.91
225 226 9.467258 TCTTGCATATTATTTTTAGCATGCTTC 57.533 29.630 28.02 0.00 39.53 3.86
226 227 9.472361 CTTGCATATTATTTTTAGCATGCTTCT 57.528 29.630 28.02 3.95 39.53 2.85
233 234 8.668510 TTATTTTTAGCATGCTTCTAGAGAGG 57.331 34.615 28.02 0.00 0.00 3.69
234 235 3.742433 TTAGCATGCTTCTAGAGAGGC 57.258 47.619 28.02 6.69 45.94 4.70
235 236 1.792115 AGCATGCTTCTAGAGAGGCT 58.208 50.000 16.30 8.31 45.92 4.58
236 237 2.956132 AGCATGCTTCTAGAGAGGCTA 58.044 47.619 16.30 2.55 45.92 3.93
237 238 3.303938 AGCATGCTTCTAGAGAGGCTAA 58.696 45.455 16.30 0.00 45.92 3.09
238 239 3.903090 AGCATGCTTCTAGAGAGGCTAAT 59.097 43.478 16.30 0.00 45.92 1.73
239 240 4.347583 AGCATGCTTCTAGAGAGGCTAATT 59.652 41.667 16.30 0.00 45.92 1.40
240 241 4.451774 GCATGCTTCTAGAGAGGCTAATTG 59.548 45.833 11.37 8.09 45.92 2.32
241 242 5.609423 CATGCTTCTAGAGAGGCTAATTGT 58.391 41.667 13.96 0.00 45.92 2.71
242 243 5.016051 TGCTTCTAGAGAGGCTAATTGTG 57.984 43.478 13.96 0.00 45.92 3.33
243 244 4.467795 TGCTTCTAGAGAGGCTAATTGTGT 59.532 41.667 13.96 0.00 45.92 3.72
244 245 5.046304 TGCTTCTAGAGAGGCTAATTGTGTT 60.046 40.000 13.96 0.00 45.92 3.32
245 246 5.293079 GCTTCTAGAGAGGCTAATTGTGTTG 59.707 44.000 6.40 0.00 42.93 3.33
246 247 6.360370 TTCTAGAGAGGCTAATTGTGTTGT 57.640 37.500 0.00 0.00 0.00 3.32
247 248 5.967088 TCTAGAGAGGCTAATTGTGTTGTC 58.033 41.667 0.00 0.00 0.00 3.18
248 249 3.944087 AGAGAGGCTAATTGTGTTGTCC 58.056 45.455 0.00 0.00 0.00 4.02
249 250 3.327757 AGAGAGGCTAATTGTGTTGTCCA 59.672 43.478 0.00 0.00 0.00 4.02
250 251 4.018960 AGAGAGGCTAATTGTGTTGTCCAT 60.019 41.667 0.00 0.00 0.00 3.41
251 252 4.265073 AGAGGCTAATTGTGTTGTCCATC 58.735 43.478 0.00 0.00 0.00 3.51
252 253 4.009675 GAGGCTAATTGTGTTGTCCATCA 58.990 43.478 0.00 0.00 0.00 3.07
253 254 4.603131 AGGCTAATTGTGTTGTCCATCAT 58.397 39.130 0.00 0.00 0.00 2.45
254 255 5.754782 AGGCTAATTGTGTTGTCCATCATA 58.245 37.500 0.00 0.00 0.00 2.15
255 256 6.367983 AGGCTAATTGTGTTGTCCATCATAT 58.632 36.000 0.00 0.00 0.00 1.78
256 257 7.517320 AGGCTAATTGTGTTGTCCATCATATA 58.483 34.615 0.00 0.00 0.00 0.86
257 258 7.663081 AGGCTAATTGTGTTGTCCATCATATAG 59.337 37.037 0.00 0.00 0.00 1.31
258 259 7.301054 GCTAATTGTGTTGTCCATCATATAGC 58.699 38.462 0.00 0.00 0.00 2.97
259 260 6.639632 AATTGTGTTGTCCATCATATAGCC 57.360 37.500 0.00 0.00 0.00 3.93
260 261 4.769345 TGTGTTGTCCATCATATAGCCA 57.231 40.909 0.00 0.00 0.00 4.75
261 262 5.109500 TGTGTTGTCCATCATATAGCCAA 57.891 39.130 0.00 0.00 0.00 4.52
262 263 5.504853 TGTGTTGTCCATCATATAGCCAAA 58.495 37.500 0.00 0.00 0.00 3.28
263 264 5.356751 TGTGTTGTCCATCATATAGCCAAAC 59.643 40.000 0.00 0.00 0.00 2.93
264 265 5.590259 GTGTTGTCCATCATATAGCCAAACT 59.410 40.000 0.00 0.00 0.00 2.66
265 266 6.765989 GTGTTGTCCATCATATAGCCAAACTA 59.234 38.462 0.00 0.00 34.64 2.24
266 267 6.992123 TGTTGTCCATCATATAGCCAAACTAG 59.008 38.462 0.00 0.00 33.29 2.57
267 268 6.747414 TGTCCATCATATAGCCAAACTAGT 57.253 37.500 0.00 0.00 33.29 2.57
268 269 7.136822 TGTCCATCATATAGCCAAACTAGTT 57.863 36.000 1.12 1.12 33.29 2.24
269 270 8.257602 TGTCCATCATATAGCCAAACTAGTTA 57.742 34.615 8.92 0.00 33.29 2.24
270 271 8.710239 TGTCCATCATATAGCCAAACTAGTTAA 58.290 33.333 8.92 0.00 33.29 2.01
271 272 9.555727 GTCCATCATATAGCCAAACTAGTTAAA 57.444 33.333 8.92 0.00 33.29 1.52
281 282 8.919777 AGCCAAACTAGTTAAAAGTAAGATGT 57.080 30.769 8.92 0.00 0.00 3.06
282 283 8.784043 AGCCAAACTAGTTAAAAGTAAGATGTG 58.216 33.333 8.92 0.00 0.00 3.21
283 284 8.565416 GCCAAACTAGTTAAAAGTAAGATGTGT 58.435 33.333 8.92 0.00 0.00 3.72
284 285 9.878599 CCAAACTAGTTAAAAGTAAGATGTGTG 57.121 33.333 8.92 0.00 0.00 3.82
290 291 8.958119 AGTTAAAAGTAAGATGTGTGAAGTGA 57.042 30.769 0.00 0.00 0.00 3.41
291 292 9.391006 AGTTAAAAGTAAGATGTGTGAAGTGAA 57.609 29.630 0.00 0.00 0.00 3.18
298 299 9.778741 AGTAAGATGTGTGAAGTGAATAAAAGA 57.221 29.630 0.00 0.00 0.00 2.52
302 303 9.288576 AGATGTGTGAAGTGAATAAAAGATTCA 57.711 29.630 0.00 0.00 35.86 2.57
362 363 4.214310 TGGTGATCACATTTCAAGGTGTT 58.786 39.130 26.47 0.00 41.15 3.32
417 418 3.506810 CTTGCACGTCAGGTTTCAAAAA 58.493 40.909 0.00 0.00 0.00 1.94
441 442 3.115390 TCCAAGCCAAGCTAATCCTAGT 58.885 45.455 0.00 0.00 38.25 2.57
450 451 6.292150 CCAAGCTAATCCTAGTCCCTAAAAG 58.708 44.000 0.00 0.00 0.00 2.27
453 454 7.750947 AGCTAATCCTAGTCCCTAAAAGAAA 57.249 36.000 0.00 0.00 0.00 2.52
455 456 7.403522 AGCTAATCCTAGTCCCTAAAAGAAAGT 59.596 37.037 0.00 0.00 0.00 2.66
456 457 8.702819 GCTAATCCTAGTCCCTAAAAGAAAGTA 58.297 37.037 0.00 0.00 0.00 2.24
460 461 8.087303 TCCTAGTCCCTAAAAGAAAGTAATCC 57.913 38.462 0.00 0.00 0.00 3.01
461 462 7.905106 TCCTAGTCCCTAAAAGAAAGTAATCCT 59.095 37.037 0.00 0.00 0.00 3.24
462 463 9.210228 CCTAGTCCCTAAAAGAAAGTAATCCTA 57.790 37.037 0.00 0.00 0.00 2.94
464 465 7.566569 AGTCCCTAAAAGAAAGTAATCCTAGC 58.433 38.462 0.00 0.00 0.00 3.42
481 482 0.466555 AGCCTAGCCAGGACGACTAG 60.467 60.000 0.85 0.00 45.91 2.57
559 560 3.186047 CGGGCGCTACCACTTTCG 61.186 66.667 7.64 0.00 42.05 3.46
937 956 1.490416 TAGGGTTAGGGTTTGCGGCA 61.490 55.000 0.00 0.00 0.00 5.69
1196 1215 4.812476 CGCGCGGGAAGTGGATCA 62.812 66.667 24.84 0.00 0.00 2.92
1252 1272 4.395542 TCTCGGTAGTTTCTCAGAGTTAGC 59.604 45.833 0.00 0.00 0.00 3.09
1353 1374 4.077300 TCATGATAGTGGTGCCAATCTC 57.923 45.455 0.00 0.00 0.00 2.75
1359 1380 0.819582 GTGGTGCCAATCTCCAATGG 59.180 55.000 0.00 0.00 39.78 3.16
1384 1405 9.478768 GGTCTCTGTTATTAGATAGGTTTTAGC 57.521 37.037 0.00 0.00 0.00 3.09
1531 1552 4.822036 TTTTGTTCGTGGTCATTACCTG 57.178 40.909 0.00 0.00 46.91 4.00
1637 1658 1.680314 CTTTCCTGCCCCTGAAGCC 60.680 63.158 0.00 0.00 0.00 4.35
1673 1695 6.299922 GCTTTCTAGGGAGGTTTAGCATAAT 58.700 40.000 0.00 0.00 0.00 1.28
1768 1790 5.821516 TTGCGGAACTAGAAAAGACAAAA 57.178 34.783 0.00 0.00 0.00 2.44
1774 1796 8.234546 GCGGAACTAGAAAAGACAAAATATCAA 58.765 33.333 0.00 0.00 0.00 2.57
2038 2145 8.299570 ACAAGACATTTTTGGATATTGTCAGTC 58.700 33.333 4.42 0.00 39.27 3.51
2041 2148 6.624423 ACATTTTTGGATATTGTCAGTCAGC 58.376 36.000 0.00 0.00 0.00 4.26
2077 2184 3.250040 GTGTAGCGTCTTTTTCACCACAT 59.750 43.478 0.00 0.00 0.00 3.21
2625 2733 1.097547 ACAGTGCCTTGCAGTCACAC 61.098 55.000 14.57 9.54 40.54 3.82
2770 2879 5.367060 GTCCCTCTCACTTCCATATACCTTT 59.633 44.000 0.00 0.00 0.00 3.11
2959 3151 5.309638 TGGATTTAGTTCACGATTTGACCA 58.690 37.500 0.00 0.00 32.26 4.02
3000 3192 4.157289 TGAGCTCTTTCATTCAATTCAGGC 59.843 41.667 16.19 0.00 0.00 4.85
3001 3193 4.084287 AGCTCTTTCATTCAATTCAGGCA 58.916 39.130 0.00 0.00 0.00 4.75
3002 3194 4.710375 AGCTCTTTCATTCAATTCAGGCAT 59.290 37.500 0.00 0.00 0.00 4.40
3003 3195 5.187186 AGCTCTTTCATTCAATTCAGGCATT 59.813 36.000 0.00 0.00 0.00 3.56
3004 3196 5.873164 GCTCTTTCATTCAATTCAGGCATTT 59.127 36.000 0.00 0.00 0.00 2.32
3005 3197 7.037438 GCTCTTTCATTCAATTCAGGCATTTA 58.963 34.615 0.00 0.00 0.00 1.40
3006 3198 7.546667 GCTCTTTCATTCAATTCAGGCATTTAA 59.453 33.333 0.00 0.00 0.00 1.52
3007 3199 9.595823 CTCTTTCATTCAATTCAGGCATTTAAT 57.404 29.630 0.00 0.00 0.00 1.40
3008 3200 9.947433 TCTTTCATTCAATTCAGGCATTTAATT 57.053 25.926 0.00 0.00 0.00 1.40
3010 3202 9.947433 TTTCATTCAATTCAGGCATTTAATTCT 57.053 25.926 0.00 0.00 0.00 2.40
3023 3215 9.599866 AGGCATTTAATTCTATGTTTTTAAGGC 57.400 29.630 0.00 0.00 0.00 4.35
3024 3216 8.539674 GGCATTTAATTCTATGTTTTTAAGGCG 58.460 33.333 0.00 0.00 0.00 5.52
3025 3217 9.083080 GCATTTAATTCTATGTTTTTAAGGCGT 57.917 29.630 0.00 0.00 0.00 5.68
3028 3220 9.834628 TTTAATTCTATGTTTTTAAGGCGTCTG 57.165 29.630 0.00 0.00 0.00 3.51
3029 3221 7.448748 AATTCTATGTTTTTAAGGCGTCTGT 57.551 32.000 0.00 0.00 0.00 3.41
3030 3222 8.556213 AATTCTATGTTTTTAAGGCGTCTGTA 57.444 30.769 0.00 0.00 0.00 2.74
3031 3223 7.966246 TTCTATGTTTTTAAGGCGTCTGTAA 57.034 32.000 0.00 0.00 0.00 2.41
3032 3224 7.591006 TCTATGTTTTTAAGGCGTCTGTAAG 57.409 36.000 0.00 0.00 0.00 2.34
3033 3225 5.622770 ATGTTTTTAAGGCGTCTGTAAGG 57.377 39.130 0.00 0.00 0.00 2.69
3034 3226 4.706035 TGTTTTTAAGGCGTCTGTAAGGA 58.294 39.130 0.00 0.00 0.00 3.36
3035 3227 4.753107 TGTTTTTAAGGCGTCTGTAAGGAG 59.247 41.667 0.00 0.00 0.00 3.69
3036 3228 3.604875 TTTAAGGCGTCTGTAAGGAGG 57.395 47.619 0.00 0.00 0.00 4.30
3037 3229 0.822164 TAAGGCGTCTGTAAGGAGGC 59.178 55.000 0.00 0.00 43.63 4.70
3038 3230 2.202756 GGCGTCTGTAAGGAGGCG 60.203 66.667 0.00 0.00 44.79 5.52
3040 3232 2.202756 CGTCTGTAAGGAGGCGCC 60.203 66.667 21.89 21.89 33.69 6.53
3041 3233 2.187163 GTCTGTAAGGAGGCGCCC 59.813 66.667 26.15 15.07 37.37 6.13
3042 3234 3.081409 TCTGTAAGGAGGCGCCCC 61.081 66.667 26.15 23.87 37.37 5.80
3043 3235 4.176752 CTGTAAGGAGGCGCCCCC 62.177 72.222 26.15 23.76 37.37 5.40
3058 3250 3.140814 CCCCCAGCGCCTTAAAGC 61.141 66.667 2.29 0.00 0.00 3.51
3059 3251 2.361104 CCCCAGCGCCTTAAAGCA 60.361 61.111 2.29 0.00 35.48 3.91
3060 3252 1.976474 CCCCAGCGCCTTAAAGCAA 60.976 57.895 2.29 0.00 35.48 3.91
3061 3253 1.531739 CCCCAGCGCCTTAAAGCAAA 61.532 55.000 2.29 0.00 35.48 3.68
3062 3254 0.109132 CCCAGCGCCTTAAAGCAAAG 60.109 55.000 2.29 0.00 35.48 2.77
3063 3255 0.733909 CCAGCGCCTTAAAGCAAAGC 60.734 55.000 2.29 0.00 35.48 3.51
3064 3256 1.067199 CAGCGCCTTAAAGCAAAGCG 61.067 55.000 2.29 0.00 35.48 4.68
3065 3257 1.081442 GCGCCTTAAAGCAAAGCGT 60.081 52.632 0.00 0.00 32.39 5.07
3066 3258 1.065572 GCGCCTTAAAGCAAAGCGTC 61.066 55.000 0.00 0.00 32.39 5.19
3067 3259 0.789383 CGCCTTAAAGCAAAGCGTCG 60.789 55.000 0.00 0.00 0.00 5.12
3068 3260 1.065572 GCCTTAAAGCAAAGCGTCGC 61.066 55.000 9.80 9.80 0.00 5.19
3069 3261 0.454452 CCTTAAAGCAAAGCGTCGCC 60.454 55.000 14.86 0.00 0.00 5.54
3070 3262 0.517316 CTTAAAGCAAAGCGTCGCCT 59.483 50.000 14.86 0.00 0.00 5.52
3071 3263 0.948678 TTAAAGCAAAGCGTCGCCTT 59.051 45.000 14.86 3.97 0.00 4.35
3072 3264 1.798283 TAAAGCAAAGCGTCGCCTTA 58.202 45.000 14.86 0.00 0.00 2.69
3073 3265 0.948678 AAAGCAAAGCGTCGCCTTAA 59.051 45.000 14.86 0.00 0.00 1.85
3074 3266 0.948678 AAGCAAAGCGTCGCCTTAAA 59.051 45.000 14.86 0.00 0.00 1.52
3075 3267 0.948678 AGCAAAGCGTCGCCTTAAAA 59.051 45.000 14.86 0.00 0.00 1.52
3076 3268 1.335496 AGCAAAGCGTCGCCTTAAAAA 59.665 42.857 14.86 0.00 0.00 1.94
3077 3269 1.450533 GCAAAGCGTCGCCTTAAAAAC 59.549 47.619 14.86 0.00 0.00 2.43
3078 3270 2.722071 CAAAGCGTCGCCTTAAAAACA 58.278 42.857 14.86 0.00 0.00 2.83
3079 3271 3.305110 CAAAGCGTCGCCTTAAAAACAT 58.695 40.909 14.86 0.00 0.00 2.71
3080 3272 4.468643 CAAAGCGTCGCCTTAAAAACATA 58.531 39.130 14.86 0.00 0.00 2.29
3081 3273 4.336532 AAGCGTCGCCTTAAAAACATAG 57.663 40.909 14.86 0.00 0.00 2.23
3275 3469 1.864029 GCCACCAACGCAAGAAACTTC 60.864 52.381 0.00 0.00 43.62 3.01
3428 3625 4.808414 TGAAATCCCAACAACAACAACA 57.192 36.364 0.00 0.00 0.00 3.33
3429 3626 5.152623 TGAAATCCCAACAACAACAACAA 57.847 34.783 0.00 0.00 0.00 2.83
3430 3627 4.932200 TGAAATCCCAACAACAACAACAAC 59.068 37.500 0.00 0.00 0.00 3.32
3431 3628 4.543590 AATCCCAACAACAACAACAACA 57.456 36.364 0.00 0.00 0.00 3.33
3432 3629 4.543590 ATCCCAACAACAACAACAACAA 57.456 36.364 0.00 0.00 0.00 2.83
3433 3630 3.654414 TCCCAACAACAACAACAACAAC 58.346 40.909 0.00 0.00 0.00 3.32
3468 3665 2.682858 GCGCCCAACCCTTCTAGTAAAT 60.683 50.000 0.00 0.00 0.00 1.40
3574 3773 3.926616 ACAAAACCGTCAGTATCAGAGG 58.073 45.455 0.00 0.00 0.00 3.69
3676 3875 0.850100 TGGGAAGGTGTTGGTGATGT 59.150 50.000 0.00 0.00 0.00 3.06
3837 4036 2.163613 GGCAATGGTAGAACGAAAAGGG 59.836 50.000 0.00 0.00 0.00 3.95
3852 4051 3.971245 AAAGGGCAACAAGAAACACAA 57.029 38.095 0.00 0.00 39.74 3.33
3949 4148 4.209307 GGAAAAGAGGTTCCCAGAGTAG 57.791 50.000 0.00 0.00 41.18 2.57
4008 4208 8.903820 AGTAACAAAAGCACTCTCTTTGTATTT 58.096 29.630 0.28 0.00 36.49 1.40
4192 4392 3.554934 TCTTGAAATTGCTGACAGTGGT 58.445 40.909 3.99 0.00 0.00 4.16
4758 4961 3.845178 TGACTGTAGTTGGAATGCTACG 58.155 45.455 0.00 0.00 40.13 3.51
4846 5049 4.331108 TGCAAACCTCATAGCATGTTACA 58.669 39.130 0.00 0.00 31.05 2.41
4850 5053 6.570378 GCAAACCTCATAGCATGTTACACTTT 60.570 38.462 0.00 0.00 0.00 2.66
4865 5069 7.414436 TGTTACACTTTGCATTGTCTTTACTC 58.586 34.615 0.00 0.00 0.00 2.59
5151 5361 2.040606 TGGTCTCCCCCTGCCTAC 59.959 66.667 0.00 0.00 0.00 3.18
5163 5373 4.086457 CCCCTGCCTACTTTATGTGTTTT 58.914 43.478 0.00 0.00 0.00 2.43
5228 5594 6.202954 AGAGTTTGTGATCTTTTCTTACGTGG 59.797 38.462 0.00 0.00 0.00 4.94
5252 5619 5.117406 AGTAAGGAATGGAATGGGACTTC 57.883 43.478 0.00 0.00 0.00 3.01
5258 5625 1.002624 GGAATGGGACTTCGGTGCA 60.003 57.895 0.00 0.00 38.06 4.57
5329 5699 1.003118 CCAAACGGAAGGAGGATGTGA 59.997 52.381 0.00 0.00 0.00 3.58
5391 5761 1.083489 GTGCGTACAAGCTGGCATAA 58.917 50.000 0.00 0.00 37.77 1.90
5468 5838 4.253685 CGACAGGAATATGTGGAACTTGT 58.746 43.478 0.00 0.00 38.04 3.16
5583 6079 2.146342 GTGGTATGGCGGATGAGAATG 58.854 52.381 0.00 0.00 0.00 2.67
5611 6108 2.556189 TGCTGTGGCGAAATGTACAAAT 59.444 40.909 0.00 0.00 42.25 2.32
5654 6159 1.224592 CGAGGGGTGGGGATCTTTG 59.775 63.158 0.00 0.00 0.00 2.77
5664 6169 1.063642 GGGGATCTTTGGGAGGAAAGG 60.064 57.143 0.00 0.00 34.27 3.11
5678 6183 5.047306 GGGAGGAAAGGGTTTTCAAATACAG 60.047 44.000 2.85 0.00 43.62 2.74
5679 6184 5.538813 GGAGGAAAGGGTTTTCAAATACAGT 59.461 40.000 2.85 0.00 43.62 3.55
5680 6185 6.294564 GGAGGAAAGGGTTTTCAAATACAGTC 60.295 42.308 2.85 0.00 43.62 3.51
5681 6186 6.133356 AGGAAAGGGTTTTCAAATACAGTCA 58.867 36.000 2.85 0.00 43.62 3.41
5682 6187 6.265422 AGGAAAGGGTTTTCAAATACAGTCAG 59.735 38.462 2.85 0.00 43.62 3.51
5683 6188 6.040504 GGAAAGGGTTTTCAAATACAGTCAGT 59.959 38.462 2.85 0.00 43.62 3.41
5724 6236 0.390124 TCAAACCGAAGTAGCGTGGT 59.610 50.000 0.00 0.00 35.90 4.16
5737 6249 2.227194 AGCGTGGTTTGGTCCTTTTAG 58.773 47.619 0.00 0.00 0.00 1.85
5748 6260 4.479158 TGGTCCTTTTAGTCTTTTGGCAT 58.521 39.130 0.00 0.00 0.00 4.40
5749 6261 4.280677 TGGTCCTTTTAGTCTTTTGGCATG 59.719 41.667 0.00 0.00 0.00 4.06
5766 6279 2.752903 GCATGGTTGGTTCCTACGAAAT 59.247 45.455 0.00 0.00 0.00 2.17
5776 6289 3.973206 TCCTACGAAATGATGTGGTGT 57.027 42.857 0.00 0.00 0.00 4.16
5778 6291 5.607939 TCCTACGAAATGATGTGGTGTAT 57.392 39.130 0.00 0.00 0.00 2.29
5806 6319 5.985530 CAGGGAAAACTCTCCAAAATCAAAC 59.014 40.000 0.00 0.00 37.20 2.93
5816 6329 3.187637 TCCAAAATCAAACCGAAGTAGCG 59.812 43.478 0.00 0.00 0.00 4.26
5870 6383 3.454447 TCCTACGAAATGATGTGGTCCAT 59.546 43.478 0.00 0.00 36.13 3.41
5910 6423 7.337480 TCCATCATGGATTCTTACATTGTTG 57.663 36.000 0.66 0.00 42.67 3.33
5911 6424 5.981315 CCATCATGGATTCTTACATTGTTGC 59.019 40.000 0.00 0.00 40.96 4.17
5912 6425 6.183360 CCATCATGGATTCTTACATTGTTGCT 60.183 38.462 0.00 0.00 40.96 3.91
5913 6426 6.839124 TCATGGATTCTTACATTGTTGCTT 57.161 33.333 0.00 0.00 0.00 3.91
5914 6427 7.230849 TCATGGATTCTTACATTGTTGCTTT 57.769 32.000 0.00 0.00 0.00 3.51
5915 6428 7.669427 TCATGGATTCTTACATTGTTGCTTTT 58.331 30.769 0.00 0.00 0.00 2.27
5916 6429 8.149647 TCATGGATTCTTACATTGTTGCTTTTT 58.850 29.630 0.00 0.00 0.00 1.94
5917 6430 7.945033 TGGATTCTTACATTGTTGCTTTTTC 57.055 32.000 0.00 0.00 0.00 2.29
5918 6431 7.495901 TGGATTCTTACATTGTTGCTTTTTCA 58.504 30.769 0.00 0.00 0.00 2.69
5919 6432 7.652909 TGGATTCTTACATTGTTGCTTTTTCAG 59.347 33.333 0.00 0.00 0.00 3.02
5920 6433 7.116805 GGATTCTTACATTGTTGCTTTTTCAGG 59.883 37.037 0.00 0.00 0.00 3.86
5921 6434 6.463995 TCTTACATTGTTGCTTTTTCAGGT 57.536 33.333 0.00 0.00 0.00 4.00
5922 6435 6.272318 TCTTACATTGTTGCTTTTTCAGGTG 58.728 36.000 0.00 0.00 0.00 4.00
5923 6436 4.734398 ACATTGTTGCTTTTTCAGGTGA 57.266 36.364 0.00 0.00 0.00 4.02
5924 6437 4.685924 ACATTGTTGCTTTTTCAGGTGAG 58.314 39.130 0.00 0.00 0.00 3.51
5925 6438 4.160252 ACATTGTTGCTTTTTCAGGTGAGT 59.840 37.500 0.00 0.00 0.00 3.41
5926 6439 3.781079 TGTTGCTTTTTCAGGTGAGTG 57.219 42.857 0.00 0.00 0.00 3.51
5927 6440 2.159254 TGTTGCTTTTTCAGGTGAGTGC 60.159 45.455 0.00 0.00 0.00 4.40
5928 6441 1.032014 TGCTTTTTCAGGTGAGTGCC 58.968 50.000 0.00 0.00 0.00 5.01
5929 6442 1.322442 GCTTTTTCAGGTGAGTGCCT 58.678 50.000 0.00 0.00 39.99 4.75
5930 6443 1.683385 GCTTTTTCAGGTGAGTGCCTT 59.317 47.619 0.00 0.00 36.58 4.35
5931 6444 2.884639 GCTTTTTCAGGTGAGTGCCTTA 59.115 45.455 0.00 0.00 36.58 2.69
5932 6445 3.304726 GCTTTTTCAGGTGAGTGCCTTAC 60.305 47.826 0.00 0.00 36.58 2.34
5933 6446 3.857157 TTTTCAGGTGAGTGCCTTACT 57.143 42.857 0.00 0.00 44.02 2.24
5934 6447 4.967084 TTTTCAGGTGAGTGCCTTACTA 57.033 40.909 0.00 0.00 40.53 1.82
5935 6448 5.499004 TTTTCAGGTGAGTGCCTTACTAT 57.501 39.130 0.00 0.00 40.53 2.12
5936 6449 5.499004 TTTCAGGTGAGTGCCTTACTATT 57.501 39.130 0.00 0.00 40.53 1.73
5937 6450 4.471904 TCAGGTGAGTGCCTTACTATTG 57.528 45.455 0.00 0.00 40.53 1.90
5938 6451 4.093743 TCAGGTGAGTGCCTTACTATTGA 58.906 43.478 0.00 0.00 40.53 2.57
5939 6452 4.716784 TCAGGTGAGTGCCTTACTATTGAT 59.283 41.667 0.00 0.00 40.53 2.57
5940 6453 4.813161 CAGGTGAGTGCCTTACTATTGATG 59.187 45.833 0.00 0.00 40.53 3.07
5941 6454 4.716784 AGGTGAGTGCCTTACTATTGATGA 59.283 41.667 0.00 0.00 40.53 2.92
5942 6455 5.367937 AGGTGAGTGCCTTACTATTGATGAT 59.632 40.000 0.00 0.00 40.53 2.45
5943 6456 6.554982 AGGTGAGTGCCTTACTATTGATGATA 59.445 38.462 0.00 0.00 40.53 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.942657 CATCTCCGCACCAATCGATTT 59.057 47.619 8.21 0.00 0.00 2.17
2 3 0.882042 GCATCTCCGCACCAATCGAT 60.882 55.000 0.00 0.00 0.00 3.59
5 6 3.017323 CGCATCTCCGCACCAATC 58.983 61.111 0.00 0.00 0.00 2.67
13 14 1.278172 CGGTCATAAGCGCATCTCCG 61.278 60.000 11.47 12.06 39.82 4.63
14 15 0.032130 TCGGTCATAAGCGCATCTCC 59.968 55.000 11.47 3.13 45.73 3.71
15 16 1.001268 TCTCGGTCATAAGCGCATCTC 60.001 52.381 11.47 0.00 45.73 2.75
16 17 1.032794 TCTCGGTCATAAGCGCATCT 58.967 50.000 11.47 0.00 45.73 2.90
17 18 1.852942 TTCTCGGTCATAAGCGCATC 58.147 50.000 11.47 0.00 45.73 3.91
18 19 1.933853 GTTTCTCGGTCATAAGCGCAT 59.066 47.619 11.47 0.00 45.73 4.73
19 20 1.337354 TGTTTCTCGGTCATAAGCGCA 60.337 47.619 11.47 0.00 45.73 6.09
20 21 1.355971 TGTTTCTCGGTCATAAGCGC 58.644 50.000 0.00 0.00 45.73 5.92
22 23 2.032178 GGCATGTTTCTCGGTCATAAGC 59.968 50.000 0.00 0.00 0.00 3.09
23 24 3.535561 AGGCATGTTTCTCGGTCATAAG 58.464 45.455 0.00 0.00 0.00 1.73
24 25 3.627395 AGGCATGTTTCTCGGTCATAA 57.373 42.857 0.00 0.00 0.00 1.90
25 26 3.627395 AAGGCATGTTTCTCGGTCATA 57.373 42.857 0.00 0.00 0.00 2.15
26 27 2.496899 AAGGCATGTTTCTCGGTCAT 57.503 45.000 0.00 0.00 0.00 3.06
27 28 3.410631 TTAAGGCATGTTTCTCGGTCA 57.589 42.857 0.00 0.00 0.00 4.02
28 29 4.759516 TTTTAAGGCATGTTTCTCGGTC 57.240 40.909 0.00 0.00 0.00 4.79
29 30 5.722021 AATTTTAAGGCATGTTTCTCGGT 57.278 34.783 0.00 0.00 0.00 4.69
30 31 5.348451 CCAAATTTTAAGGCATGTTTCTCGG 59.652 40.000 0.00 0.00 0.00 4.63
31 32 5.925969 ACCAAATTTTAAGGCATGTTTCTCG 59.074 36.000 0.00 0.00 0.00 4.04
32 33 7.154656 AGACCAAATTTTAAGGCATGTTTCTC 58.845 34.615 0.00 0.00 0.00 2.87
33 34 7.066307 AGACCAAATTTTAAGGCATGTTTCT 57.934 32.000 0.00 0.00 0.00 2.52
34 35 6.928492 TGAGACCAAATTTTAAGGCATGTTTC 59.072 34.615 0.00 0.00 0.00 2.78
35 36 6.825610 TGAGACCAAATTTTAAGGCATGTTT 58.174 32.000 0.00 0.00 0.00 2.83
36 37 6.418057 TGAGACCAAATTTTAAGGCATGTT 57.582 33.333 0.00 0.00 0.00 2.71
37 38 6.418057 TTGAGACCAAATTTTAAGGCATGT 57.582 33.333 0.00 0.00 0.00 3.21
38 39 7.910441 AATTGAGACCAAATTTTAAGGCATG 57.090 32.000 0.00 0.00 35.67 4.06
39 40 7.391275 CCAAATTGAGACCAAATTTTAAGGCAT 59.609 33.333 0.00 0.00 35.67 4.40
40 41 6.709846 CCAAATTGAGACCAAATTTTAAGGCA 59.290 34.615 0.00 0.00 35.67 4.75
41 42 6.348458 GCCAAATTGAGACCAAATTTTAAGGC 60.348 38.462 0.00 0.00 35.67 4.35
42 43 6.709846 TGCCAAATTGAGACCAAATTTTAAGG 59.290 34.615 0.00 0.00 35.67 2.69
43 44 7.727331 TGCCAAATTGAGACCAAATTTTAAG 57.273 32.000 0.00 0.00 35.67 1.85
44 45 7.772757 AGTTGCCAAATTGAGACCAAATTTTAA 59.227 29.630 0.00 0.00 35.67 1.52
45 46 7.278875 AGTTGCCAAATTGAGACCAAATTTTA 58.721 30.769 0.00 0.00 35.67 1.52
46 47 6.121590 AGTTGCCAAATTGAGACCAAATTTT 58.878 32.000 0.00 0.00 35.67 1.82
47 48 5.683681 AGTTGCCAAATTGAGACCAAATTT 58.316 33.333 0.00 0.00 35.67 1.82
48 49 5.294734 AGTTGCCAAATTGAGACCAAATT 57.705 34.783 0.00 0.00 35.67 1.82
49 50 4.262592 GGAGTTGCCAAATTGAGACCAAAT 60.263 41.667 0.00 0.00 34.41 2.32
50 51 3.069443 GGAGTTGCCAAATTGAGACCAAA 59.931 43.478 0.00 0.00 34.41 3.28
51 52 2.627699 GGAGTTGCCAAATTGAGACCAA 59.372 45.455 0.00 0.00 36.34 3.67
52 53 2.238521 GGAGTTGCCAAATTGAGACCA 58.761 47.619 0.00 0.00 36.34 4.02
53 54 2.238521 TGGAGTTGCCAAATTGAGACC 58.761 47.619 0.00 0.00 45.87 3.85
64 65 0.035820 TACACCCGATTGGAGTTGCC 60.036 55.000 0.00 0.00 38.94 4.52
65 66 1.467342 GTTACACCCGATTGGAGTTGC 59.533 52.381 0.00 0.00 38.94 4.17
66 67 2.081462 GGTTACACCCGATTGGAGTTG 58.919 52.381 0.00 0.00 38.94 3.16
67 68 2.484742 GGTTACACCCGATTGGAGTT 57.515 50.000 0.00 0.00 38.94 3.01
77 78 0.174162 ACGTCTATGCGGTTACACCC 59.826 55.000 0.00 0.00 33.75 4.61
78 79 1.274596 CACGTCTATGCGGTTACACC 58.725 55.000 0.00 0.00 35.98 4.16
79 80 1.135315 TCCACGTCTATGCGGTTACAC 60.135 52.381 0.00 0.00 35.98 2.90
80 81 1.135315 GTCCACGTCTATGCGGTTACA 60.135 52.381 0.00 0.00 35.98 2.41
81 82 1.133790 AGTCCACGTCTATGCGGTTAC 59.866 52.381 0.00 0.00 35.98 2.50
82 83 1.402968 GAGTCCACGTCTATGCGGTTA 59.597 52.381 0.00 0.00 35.98 2.85
83 84 0.172803 GAGTCCACGTCTATGCGGTT 59.827 55.000 0.00 0.00 35.98 4.44
84 85 1.664321 GGAGTCCACGTCTATGCGGT 61.664 60.000 3.60 0.00 35.98 5.68
85 86 1.065928 GGAGTCCACGTCTATGCGG 59.934 63.158 3.60 0.00 35.98 5.69
86 87 1.298413 CGGAGTCCACGTCTATGCG 60.298 63.158 10.49 0.00 37.94 4.73
87 88 0.248539 GTCGGAGTCCACGTCTATGC 60.249 60.000 10.49 0.00 0.00 3.14
88 89 0.027716 CGTCGGAGTCCACGTCTATG 59.972 60.000 19.72 0.00 0.00 2.23
89 90 0.107993 TCGTCGGAGTCCACGTCTAT 60.108 55.000 24.07 0.00 37.30 1.98
90 91 1.016130 GTCGTCGGAGTCCACGTCTA 61.016 60.000 24.07 10.30 37.30 2.59
91 92 2.031616 TCGTCGGAGTCCACGTCT 59.968 61.111 24.07 0.00 37.30 4.18
92 93 1.919956 ATGTCGTCGGAGTCCACGTC 61.920 60.000 24.07 20.74 37.30 4.34
93 94 1.919956 GATGTCGTCGGAGTCCACGT 61.920 60.000 24.07 11.54 37.30 4.49
94 95 1.226323 GATGTCGTCGGAGTCCACG 60.226 63.158 21.13 21.13 37.36 4.94
95 96 0.242825 TTGATGTCGTCGGAGTCCAC 59.757 55.000 10.49 5.87 0.00 4.02
96 97 0.963225 TTTGATGTCGTCGGAGTCCA 59.037 50.000 10.49 0.00 0.00 4.02
97 98 1.067776 ACTTTGATGTCGTCGGAGTCC 60.068 52.381 0.00 0.00 0.00 3.85
98 99 1.986378 CACTTTGATGTCGTCGGAGTC 59.014 52.381 0.00 0.00 0.00 3.36
99 100 1.611977 TCACTTTGATGTCGTCGGAGT 59.388 47.619 0.00 0.00 0.00 3.85
100 101 1.986378 GTCACTTTGATGTCGTCGGAG 59.014 52.381 0.00 0.00 0.00 4.63
101 102 1.338655 TGTCACTTTGATGTCGTCGGA 59.661 47.619 0.00 0.00 0.00 4.55
102 103 1.721389 CTGTCACTTTGATGTCGTCGG 59.279 52.381 0.00 0.00 0.00 4.79
103 104 2.658802 CTCTGTCACTTTGATGTCGTCG 59.341 50.000 0.00 0.00 0.00 5.12
104 105 3.902150 TCTCTGTCACTTTGATGTCGTC 58.098 45.455 0.00 0.00 0.00 4.20
105 106 4.322080 TTCTCTGTCACTTTGATGTCGT 57.678 40.909 0.00 0.00 0.00 4.34
106 107 5.235186 AGTTTTCTCTGTCACTTTGATGTCG 59.765 40.000 0.00 0.00 0.00 4.35
107 108 6.610741 AGTTTTCTCTGTCACTTTGATGTC 57.389 37.500 0.00 0.00 0.00 3.06
108 109 7.987458 TCTTAGTTTTCTCTGTCACTTTGATGT 59.013 33.333 0.00 0.00 0.00 3.06
109 110 8.370493 TCTTAGTTTTCTCTGTCACTTTGATG 57.630 34.615 0.00 0.00 0.00 3.07
110 111 8.964476 TTCTTAGTTTTCTCTGTCACTTTGAT 57.036 30.769 0.00 0.00 0.00 2.57
111 112 8.830580 CATTCTTAGTTTTCTCTGTCACTTTGA 58.169 33.333 0.00 0.00 0.00 2.69
112 113 8.072567 CCATTCTTAGTTTTCTCTGTCACTTTG 58.927 37.037 0.00 0.00 0.00 2.77
113 114 7.993183 TCCATTCTTAGTTTTCTCTGTCACTTT 59.007 33.333 0.00 0.00 0.00 2.66
114 115 7.509546 TCCATTCTTAGTTTTCTCTGTCACTT 58.490 34.615 0.00 0.00 0.00 3.16
115 116 7.067496 TCCATTCTTAGTTTTCTCTGTCACT 57.933 36.000 0.00 0.00 0.00 3.41
116 117 6.370166 CCTCCATTCTTAGTTTTCTCTGTCAC 59.630 42.308 0.00 0.00 0.00 3.67
117 118 6.043243 ACCTCCATTCTTAGTTTTCTCTGTCA 59.957 38.462 0.00 0.00 0.00 3.58
118 119 6.468543 ACCTCCATTCTTAGTTTTCTCTGTC 58.531 40.000 0.00 0.00 0.00 3.51
119 120 6.271159 AGACCTCCATTCTTAGTTTTCTCTGT 59.729 38.462 0.00 0.00 0.00 3.41
120 121 6.706295 AGACCTCCATTCTTAGTTTTCTCTG 58.294 40.000 0.00 0.00 0.00 3.35
121 122 6.728632 AGAGACCTCCATTCTTAGTTTTCTCT 59.271 38.462 0.00 0.00 33.00 3.10
122 123 6.941857 AGAGACCTCCATTCTTAGTTTTCTC 58.058 40.000 0.00 0.00 0.00 2.87
123 124 6.728632 AGAGAGACCTCCATTCTTAGTTTTCT 59.271 38.462 0.00 0.00 40.30 2.52
124 125 6.941857 AGAGAGACCTCCATTCTTAGTTTTC 58.058 40.000 0.00 0.00 40.30 2.29
125 126 6.943899 AGAGAGACCTCCATTCTTAGTTTT 57.056 37.500 0.00 0.00 40.30 2.43
126 127 6.943899 AAGAGAGACCTCCATTCTTAGTTT 57.056 37.500 0.00 0.00 40.30 2.66
127 128 6.350612 CGAAAGAGAGACCTCCATTCTTAGTT 60.351 42.308 0.00 0.00 40.30 2.24
128 129 5.126384 CGAAAGAGAGACCTCCATTCTTAGT 59.874 44.000 0.00 0.00 40.30 2.24
129 130 5.358442 TCGAAAGAGAGACCTCCATTCTTAG 59.642 44.000 0.00 1.25 40.30 2.18
130 131 5.262009 TCGAAAGAGAGACCTCCATTCTTA 58.738 41.667 0.00 0.00 40.30 2.10
131 132 4.090090 TCGAAAGAGAGACCTCCATTCTT 58.910 43.478 0.00 0.00 40.30 2.52
132 133 3.702792 TCGAAAGAGAGACCTCCATTCT 58.297 45.455 0.00 0.00 40.30 2.40
152 153 8.858003 TCATCTAAAATTATCGCCGATAGATC 57.142 34.615 6.93 0.00 39.76 2.75
178 179 8.786898 GCAAGAAATCACAAGCAAGGATATATA 58.213 33.333 0.00 0.00 0.00 0.86
179 180 7.286087 TGCAAGAAATCACAAGCAAGGATATAT 59.714 33.333 0.00 0.00 0.00 0.86
180 181 6.602803 TGCAAGAAATCACAAGCAAGGATATA 59.397 34.615 0.00 0.00 0.00 0.86
181 182 5.419788 TGCAAGAAATCACAAGCAAGGATAT 59.580 36.000 0.00 0.00 0.00 1.63
182 183 4.766373 TGCAAGAAATCACAAGCAAGGATA 59.234 37.500 0.00 0.00 0.00 2.59
183 184 3.575256 TGCAAGAAATCACAAGCAAGGAT 59.425 39.130 0.00 0.00 0.00 3.24
184 185 2.957680 TGCAAGAAATCACAAGCAAGGA 59.042 40.909 0.00 0.00 0.00 3.36
185 186 3.374220 TGCAAGAAATCACAAGCAAGG 57.626 42.857 0.00 0.00 0.00 3.61
186 187 8.867112 ATAATATGCAAGAAATCACAAGCAAG 57.133 30.769 0.00 0.00 35.45 4.01
187 188 9.656040 AAATAATATGCAAGAAATCACAAGCAA 57.344 25.926 0.00 0.00 35.45 3.91
188 189 9.656040 AAAATAATATGCAAGAAATCACAAGCA 57.344 25.926 0.00 0.00 36.34 3.91
197 198 9.820725 AGCATGCTAAAAATAATATGCAAGAAA 57.179 25.926 21.21 0.00 42.34 2.52
198 199 9.820725 AAGCATGCTAAAAATAATATGCAAGAA 57.179 25.926 23.00 0.00 42.34 2.52
199 200 9.467258 GAAGCATGCTAAAAATAATATGCAAGA 57.533 29.630 23.00 0.00 42.34 3.02
200 201 9.472361 AGAAGCATGCTAAAAATAATATGCAAG 57.528 29.630 23.00 0.00 42.34 4.01
207 208 9.282569 CCTCTCTAGAAGCATGCTAAAAATAAT 57.717 33.333 23.00 1.44 0.00 1.28
208 209 7.227512 GCCTCTCTAGAAGCATGCTAAAAATAA 59.772 37.037 23.00 4.35 32.01 1.40
209 210 6.708054 GCCTCTCTAGAAGCATGCTAAAAATA 59.292 38.462 23.00 8.64 32.01 1.40
210 211 5.530543 GCCTCTCTAGAAGCATGCTAAAAAT 59.469 40.000 23.00 4.16 32.01 1.82
211 212 4.878397 GCCTCTCTAGAAGCATGCTAAAAA 59.122 41.667 23.00 6.21 32.01 1.94
212 213 4.163078 AGCCTCTCTAGAAGCATGCTAAAA 59.837 41.667 23.00 8.13 34.07 1.52
213 214 3.708631 AGCCTCTCTAGAAGCATGCTAAA 59.291 43.478 23.00 8.51 34.07 1.85
214 215 3.303938 AGCCTCTCTAGAAGCATGCTAA 58.696 45.455 23.00 8.90 34.07 3.09
215 216 2.956132 AGCCTCTCTAGAAGCATGCTA 58.044 47.619 23.00 4.25 34.07 3.49
216 217 1.792115 AGCCTCTCTAGAAGCATGCT 58.208 50.000 16.30 16.30 34.07 3.79
217 218 3.742433 TTAGCCTCTCTAGAAGCATGC 57.258 47.619 10.51 10.51 34.07 4.06
218 219 5.466058 CACAATTAGCCTCTCTAGAAGCATG 59.534 44.000 10.67 0.00 34.07 4.06
219 220 5.130145 ACACAATTAGCCTCTCTAGAAGCAT 59.870 40.000 10.67 1.13 34.07 3.79
220 221 4.467795 ACACAATTAGCCTCTCTAGAAGCA 59.532 41.667 10.67 0.00 34.07 3.91
221 222 5.017294 ACACAATTAGCCTCTCTAGAAGC 57.983 43.478 0.00 0.00 0.00 3.86
222 223 6.402222 ACAACACAATTAGCCTCTCTAGAAG 58.598 40.000 0.00 0.00 0.00 2.85
223 224 6.360370 ACAACACAATTAGCCTCTCTAGAA 57.640 37.500 0.00 0.00 0.00 2.10
224 225 5.105310 GGACAACACAATTAGCCTCTCTAGA 60.105 44.000 0.00 0.00 0.00 2.43
225 226 5.112686 GGACAACACAATTAGCCTCTCTAG 58.887 45.833 0.00 0.00 0.00 2.43
226 227 4.530553 TGGACAACACAATTAGCCTCTCTA 59.469 41.667 0.00 0.00 0.00 2.43
227 228 3.327757 TGGACAACACAATTAGCCTCTCT 59.672 43.478 0.00 0.00 0.00 3.10
228 229 3.674997 TGGACAACACAATTAGCCTCTC 58.325 45.455 0.00 0.00 0.00 3.20
229 230 3.788227 TGGACAACACAATTAGCCTCT 57.212 42.857 0.00 0.00 0.00 3.69
230 231 4.009675 TGATGGACAACACAATTAGCCTC 58.990 43.478 0.00 0.00 0.00 4.70
231 232 4.032960 TGATGGACAACACAATTAGCCT 57.967 40.909 0.00 0.00 0.00 4.58
232 233 4.989279 ATGATGGACAACACAATTAGCC 57.011 40.909 0.00 0.00 0.00 3.93
233 234 7.301054 GCTATATGATGGACAACACAATTAGC 58.699 38.462 0.00 0.00 0.00 3.09
234 235 7.445096 TGGCTATATGATGGACAACACAATTAG 59.555 37.037 0.00 0.00 0.00 1.73
235 236 7.286313 TGGCTATATGATGGACAACACAATTA 58.714 34.615 0.00 0.00 0.00 1.40
236 237 6.128486 TGGCTATATGATGGACAACACAATT 58.872 36.000 0.00 0.00 0.00 2.32
237 238 5.693961 TGGCTATATGATGGACAACACAAT 58.306 37.500 0.00 0.00 0.00 2.71
238 239 5.109500 TGGCTATATGATGGACAACACAA 57.891 39.130 0.00 0.00 0.00 3.33
239 240 4.769345 TGGCTATATGATGGACAACACA 57.231 40.909 0.00 0.00 0.00 3.72
240 241 5.590259 AGTTTGGCTATATGATGGACAACAC 59.410 40.000 0.00 0.00 38.58 3.32
241 242 5.754782 AGTTTGGCTATATGATGGACAACA 58.245 37.500 0.00 0.00 38.58 3.33
242 243 6.992715 ACTAGTTTGGCTATATGATGGACAAC 59.007 38.462 0.00 0.00 38.58 3.32
243 244 7.136822 ACTAGTTTGGCTATATGATGGACAA 57.863 36.000 0.00 0.00 36.94 3.18
244 245 6.747414 ACTAGTTTGGCTATATGATGGACA 57.253 37.500 0.00 0.00 0.00 4.02
245 246 9.555727 TTTAACTAGTTTGGCTATATGATGGAC 57.444 33.333 14.49 0.00 0.00 4.02
256 257 8.784043 CACATCTTACTTTTAACTAGTTTGGCT 58.216 33.333 14.49 0.00 0.00 4.75
257 258 8.565416 ACACATCTTACTTTTAACTAGTTTGGC 58.435 33.333 14.49 0.00 0.00 4.52
258 259 9.878599 CACACATCTTACTTTTAACTAGTTTGG 57.121 33.333 14.49 4.58 0.00 3.28
265 266 8.958119 TCACTTCACACATCTTACTTTTAACT 57.042 30.769 0.00 0.00 0.00 2.24
272 273 9.778741 TCTTTTATTCACTTCACACATCTTACT 57.221 29.630 0.00 0.00 0.00 2.24
276 277 9.288576 TGAATCTTTTATTCACTTCACACATCT 57.711 29.630 0.00 0.00 33.55 2.90
332 333 9.293404 CCTTGAAATGTGATCACCATATTATCT 57.707 33.333 22.85 2.08 35.85 1.98
333 334 9.071276 ACCTTGAAATGTGATCACCATATTATC 57.929 33.333 22.85 14.46 35.85 1.75
334 335 8.853126 CACCTTGAAATGTGATCACCATATTAT 58.147 33.333 22.85 5.85 35.85 1.28
335 336 7.833682 ACACCTTGAAATGTGATCACCATATTA 59.166 33.333 22.85 3.48 35.85 0.98
336 337 6.664816 ACACCTTGAAATGTGATCACCATATT 59.335 34.615 22.85 12.99 38.08 1.28
337 338 6.189859 ACACCTTGAAATGTGATCACCATAT 58.810 36.000 22.85 7.35 36.35 1.78
338 339 5.569355 ACACCTTGAAATGTGATCACCATA 58.431 37.500 22.85 5.05 36.35 2.74
339 340 4.410099 ACACCTTGAAATGTGATCACCAT 58.590 39.130 22.85 13.15 36.35 3.55
340 341 3.831323 ACACCTTGAAATGTGATCACCA 58.169 40.909 22.85 10.66 36.35 4.17
341 342 4.278170 TGAACACCTTGAAATGTGATCACC 59.722 41.667 22.85 8.07 38.74 4.02
342 343 5.437289 TGAACACCTTGAAATGTGATCAC 57.563 39.130 19.27 19.27 38.74 3.06
343 344 5.593909 ACTTGAACACCTTGAAATGTGATCA 59.406 36.000 7.13 7.13 40.90 2.92
344 345 6.016777 AGACTTGAACACCTTGAAATGTGATC 60.017 38.462 5.61 4.21 35.54 2.92
345 346 5.829924 AGACTTGAACACCTTGAAATGTGAT 59.170 36.000 5.61 0.00 36.35 3.06
346 347 5.192927 AGACTTGAACACCTTGAAATGTGA 58.807 37.500 5.61 0.00 36.35 3.58
347 348 5.505173 AGACTTGAACACCTTGAAATGTG 57.495 39.130 0.00 0.00 38.44 3.21
348 349 4.580580 GGAGACTTGAACACCTTGAAATGT 59.419 41.667 0.00 0.00 0.00 2.71
349 350 4.022849 GGGAGACTTGAACACCTTGAAATG 60.023 45.833 0.00 0.00 0.00 2.32
353 354 2.408565 AGGGAGACTTGAACACCTTGA 58.591 47.619 0.00 0.00 0.00 3.02
362 363 2.502142 TACGTGCTAGGGAGACTTGA 57.498 50.000 0.00 0.00 0.00 3.02
417 418 3.986435 AGGATTAGCTTGGCTTGGAAAT 58.014 40.909 0.00 0.00 40.44 2.17
441 442 6.677076 AGGCTAGGATTACTTTCTTTTAGGGA 59.323 38.462 0.00 0.00 0.00 4.20
450 451 4.888917 CTGGCTAGGCTAGGATTACTTTC 58.111 47.826 22.40 2.86 33.47 2.62
460 461 0.466555 AGTCGTCCTGGCTAGGCTAG 60.467 60.000 17.33 17.33 44.22 3.42
461 462 0.841961 TAGTCGTCCTGGCTAGGCTA 59.158 55.000 18.18 4.14 44.22 3.93
462 463 0.466555 CTAGTCGTCCTGGCTAGGCT 60.467 60.000 18.18 5.20 44.22 4.58
463 464 2.034607 CTAGTCGTCCTGGCTAGGC 58.965 63.158 12.10 9.85 44.22 3.93
464 465 2.034607 GCTAGTCGTCCTGGCTAGG 58.965 63.158 10.47 10.47 43.85 3.02
481 482 1.522580 GCCCGGATCAGTTGAGAGC 60.523 63.158 0.73 0.00 0.00 4.09
673 685 3.594775 TTGGCGTTGCTGTGCTGG 61.595 61.111 0.00 0.00 0.00 4.85
674 686 2.353839 GTTGGCGTTGCTGTGCTG 60.354 61.111 0.00 0.00 0.00 4.41
678 690 1.752694 AGTTGGTTGGCGTTGCTGT 60.753 52.632 0.00 0.00 0.00 4.40
794 806 4.875544 TGGAATTGGAATTTCGATCGAC 57.124 40.909 19.26 6.07 0.00 4.20
832 844 1.803519 CCGTTGCTCTCAGTCGCTC 60.804 63.158 0.00 0.00 0.00 5.03
1196 1215 2.668550 GAACCAAACGGGAGCGCT 60.669 61.111 11.27 11.27 41.15 5.92
1252 1272 2.093973 ACCTTTGTCTCATCGCAGTAGG 60.094 50.000 0.00 0.00 0.00 3.18
1284 1304 2.125269 GACCGCCTACACGCCAAT 60.125 61.111 0.00 0.00 0.00 3.16
1328 1349 2.710377 TGGCACCACTATCATGAACAC 58.290 47.619 0.00 0.00 0.00 3.32
1353 1374 7.967908 ACCTATCTAATAACAGAGACCATTGG 58.032 38.462 0.00 0.00 0.00 3.16
1359 1380 9.478768 GGCTAAAACCTATCTAATAACAGAGAC 57.521 37.037 0.00 0.00 0.00 3.36
1384 1405 6.543465 TGAATACAGAGACCTTAAATGCATGG 59.457 38.462 0.00 0.00 0.00 3.66
1531 1552 1.595093 CCACCGAACATTCCTTGGGC 61.595 60.000 0.00 0.00 0.00 5.36
1637 1658 2.093764 CCTAGAAAGCCACTGTCTGGAG 60.094 54.545 0.06 0.00 43.95 3.86
1673 1695 1.165907 CCTGTTCCGTGCAAGCAGAA 61.166 55.000 7.19 0.00 0.00 3.02
1745 1767 5.821516 TTTGTCTTTTCTAGTTCCGCAAA 57.178 34.783 0.00 0.00 0.00 3.68
1768 1790 9.988815 CTAAGCAACTAGTTACAGGATTGATAT 57.011 33.333 8.04 0.00 0.00 1.63
1774 1796 7.275920 CCAATCTAAGCAACTAGTTACAGGAT 58.724 38.462 8.04 5.31 0.00 3.24
1893 2000 9.944376 AAAGTTGTTAGCTAGATATGTTGAAGA 57.056 29.630 0.00 0.00 0.00 2.87
2038 2145 2.902523 ACACTAGATCTGCACATGCTG 58.097 47.619 5.18 4.87 42.66 4.41
2041 2148 3.048501 CGCTACACTAGATCTGCACATG 58.951 50.000 5.18 0.00 0.00 3.21
2077 2184 5.360999 AGTGATCATTCGGACTTGATACTCA 59.639 40.000 0.00 0.00 32.84 3.41
2246 2354 7.176515 TGAGGAAAGCTAGAATGCATTAAACAA 59.823 33.333 12.97 0.00 34.99 2.83
2625 2733 3.068165 TGCTGATGGAAGACATACTACGG 59.932 47.826 0.00 0.00 40.72 4.02
2770 2879 8.258850 ACTTGCTATAAGCCATAACCTAACTA 57.741 34.615 0.00 0.00 41.51 2.24
2959 3151 6.059787 AGCTCATTGAGAAATAGTTGACCT 57.940 37.500 17.87 0.00 0.00 3.85
3002 3194 9.834628 CAGACGCCTTAAAAACATAGAATTAAA 57.165 29.630 0.00 0.00 0.00 1.52
3003 3195 9.005777 ACAGACGCCTTAAAAACATAGAATTAA 57.994 29.630 0.00 0.00 0.00 1.40
3004 3196 8.556213 ACAGACGCCTTAAAAACATAGAATTA 57.444 30.769 0.00 0.00 0.00 1.40
3005 3197 7.448748 ACAGACGCCTTAAAAACATAGAATT 57.551 32.000 0.00 0.00 0.00 2.17
3006 3198 8.556213 TTACAGACGCCTTAAAAACATAGAAT 57.444 30.769 0.00 0.00 0.00 2.40
3007 3199 7.118680 CCTTACAGACGCCTTAAAAACATAGAA 59.881 37.037 0.00 0.00 0.00 2.10
3008 3200 6.592607 CCTTACAGACGCCTTAAAAACATAGA 59.407 38.462 0.00 0.00 0.00 1.98
3009 3201 6.592607 TCCTTACAGACGCCTTAAAAACATAG 59.407 38.462 0.00 0.00 0.00 2.23
3010 3202 6.465948 TCCTTACAGACGCCTTAAAAACATA 58.534 36.000 0.00 0.00 0.00 2.29
3011 3203 5.310451 TCCTTACAGACGCCTTAAAAACAT 58.690 37.500 0.00 0.00 0.00 2.71
3012 3204 4.706035 TCCTTACAGACGCCTTAAAAACA 58.294 39.130 0.00 0.00 0.00 2.83
3013 3205 4.153655 CCTCCTTACAGACGCCTTAAAAAC 59.846 45.833 0.00 0.00 0.00 2.43
3014 3206 4.320870 CCTCCTTACAGACGCCTTAAAAA 58.679 43.478 0.00 0.00 0.00 1.94
3015 3207 3.867216 GCCTCCTTACAGACGCCTTAAAA 60.867 47.826 0.00 0.00 0.00 1.52
3016 3208 2.354403 GCCTCCTTACAGACGCCTTAAA 60.354 50.000 0.00 0.00 0.00 1.52
3017 3209 1.206371 GCCTCCTTACAGACGCCTTAA 59.794 52.381 0.00 0.00 0.00 1.85
3018 3210 0.822164 GCCTCCTTACAGACGCCTTA 59.178 55.000 0.00 0.00 0.00 2.69
3019 3211 1.597461 GCCTCCTTACAGACGCCTT 59.403 57.895 0.00 0.00 0.00 4.35
3020 3212 2.711922 CGCCTCCTTACAGACGCCT 61.712 63.158 0.00 0.00 0.00 5.52
3021 3213 2.202756 CGCCTCCTTACAGACGCC 60.203 66.667 0.00 0.00 0.00 5.68
3022 3214 2.886124 GCGCCTCCTTACAGACGC 60.886 66.667 0.00 0.00 39.49 5.19
3023 3215 2.202756 GGCGCCTCCTTACAGACG 60.203 66.667 22.15 0.00 0.00 4.18
3024 3216 2.187163 GGGCGCCTCCTTACAGAC 59.813 66.667 28.56 0.41 34.39 3.51
3025 3217 3.081409 GGGGCGCCTCCTTACAGA 61.081 66.667 28.56 0.00 34.39 3.41
3026 3218 4.176752 GGGGGCGCCTCCTTACAG 62.177 72.222 39.11 0.00 34.39 2.74
3041 3233 3.140814 GCTTTAAGGCGCTGGGGG 61.141 66.667 7.64 0.00 0.00 5.40
3042 3234 1.531739 TTTGCTTTAAGGCGCTGGGG 61.532 55.000 7.64 0.00 34.52 4.96
3043 3235 0.109132 CTTTGCTTTAAGGCGCTGGG 60.109 55.000 7.64 0.00 34.52 4.45
3044 3236 0.733909 GCTTTGCTTTAAGGCGCTGG 60.734 55.000 7.64 0.00 31.39 4.85
3045 3237 2.729378 GCTTTGCTTTAAGGCGCTG 58.271 52.632 7.64 0.00 31.39 5.18
3049 3241 1.065572 GCGACGCTTTGCTTTAAGGC 61.066 55.000 13.73 1.97 37.96 4.35
3050 3242 0.454452 GGCGACGCTTTGCTTTAAGG 60.454 55.000 20.77 0.00 31.91 2.69
3051 3243 0.517316 AGGCGACGCTTTGCTTTAAG 59.483 50.000 20.77 0.00 31.91 1.85
3052 3244 0.948678 AAGGCGACGCTTTGCTTTAA 59.051 45.000 20.77 0.00 29.68 1.52
3053 3245 1.798283 TAAGGCGACGCTTTGCTTTA 58.202 45.000 25.34 3.74 33.56 1.85
3054 3246 0.948678 TTAAGGCGACGCTTTGCTTT 59.051 45.000 25.34 5.13 35.63 3.51
3055 3247 0.948678 TTTAAGGCGACGCTTTGCTT 59.051 45.000 25.34 18.47 31.91 3.91
3056 3248 0.948678 TTTTAAGGCGACGCTTTGCT 59.051 45.000 25.34 8.93 31.91 3.91
3057 3249 1.450533 GTTTTTAAGGCGACGCTTTGC 59.549 47.619 25.34 6.58 0.00 3.68
3058 3250 2.722071 TGTTTTTAAGGCGACGCTTTG 58.278 42.857 25.34 0.00 0.00 2.77
3059 3251 3.636282 ATGTTTTTAAGGCGACGCTTT 57.364 38.095 21.23 21.23 0.00 3.51
3060 3252 3.998341 TCTATGTTTTTAAGGCGACGCTT 59.002 39.130 20.77 9.77 0.00 4.68
3061 3253 3.592059 TCTATGTTTTTAAGGCGACGCT 58.408 40.909 20.77 2.90 0.00 5.07
3062 3254 4.531659 ATCTATGTTTTTAAGGCGACGC 57.468 40.909 12.43 12.43 0.00 5.19
3063 3255 9.498307 AATTAAATCTATGTTTTTAAGGCGACG 57.502 29.630 0.00 0.00 32.52 5.12
3275 3469 6.016276 GCTAATCAACCAATACTTATGTGGGG 60.016 42.308 0.00 0.00 36.69 4.96
3428 3625 3.022287 CTTCGCTGCACCGTTGTT 58.978 55.556 0.64 0.00 0.00 2.83
3429 3626 3.649986 GCTTCGCTGCACCGTTGT 61.650 61.111 0.64 0.00 0.00 3.32
3430 3627 4.724697 CGCTTCGCTGCACCGTTG 62.725 66.667 0.64 0.00 0.00 4.10
3468 3665 8.958119 AAAGTATACTCGATCCAGCATTTAAA 57.042 30.769 5.70 0.00 0.00 1.52
3547 3746 7.086376 TCTGATACTGACGGTTTTGTTACTAC 58.914 38.462 0.00 0.00 0.00 2.73
3574 3773 6.474427 CACAGATCATGTATTTTTGTGGCATC 59.526 38.462 0.00 0.00 41.41 3.91
3676 3875 6.746120 TGCAATAAAACCTTTAACGCCTTAA 58.254 32.000 0.00 0.00 0.00 1.85
3819 4018 3.149005 TGCCCTTTTCGTTCTACCATT 57.851 42.857 0.00 0.00 0.00 3.16
3837 4036 4.233789 TGTGAAGTTGTGTTTCTTGTTGC 58.766 39.130 0.00 0.00 0.00 4.17
3949 4148 5.868043 ATTGCTTGCTAAGAATTTTTGCC 57.132 34.783 0.00 0.00 0.00 4.52
4008 4208 7.449395 AGTCCTTGTTTGATGATCAAGATGAAA 59.551 33.333 8.01 0.23 40.35 2.69
4192 4392 1.953686 GTGTTTTGGCTGGCTGAGTAA 59.046 47.619 2.00 0.00 0.00 2.24
4758 4961 2.288763 GCTTCCTAGCAGGCTCTCATAC 60.289 54.545 0.00 0.00 46.95 2.39
4846 5049 7.516198 AAGATGAGTAAAGACAATGCAAAGT 57.484 32.000 0.00 0.00 0.00 2.66
4850 5053 7.147312 CCAAAAAGATGAGTAAAGACAATGCA 58.853 34.615 0.00 0.00 0.00 3.96
4865 5069 4.820716 TGCCATTGGAAAACCAAAAAGATG 59.179 37.500 6.95 0.15 33.20 2.90
4958 5162 1.271163 ACCCCAGACAATACCAACACG 60.271 52.381 0.00 0.00 0.00 4.49
4962 5166 1.553248 CGAGACCCCAGACAATACCAA 59.447 52.381 0.00 0.00 0.00 3.67
5228 5594 3.459969 AGTCCCATTCCATTCCTTACTCC 59.540 47.826 0.00 0.00 0.00 3.85
5252 5619 1.669115 CAGAACACCTCCTGCACCG 60.669 63.158 0.00 0.00 0.00 4.94
5258 5625 0.779997 ATTTGGCCAGAACACCTCCT 59.220 50.000 5.11 0.00 0.00 3.69
5329 5699 0.739813 GATTCGTAGTGCCAAGCCGT 60.740 55.000 0.00 0.00 0.00 5.68
5391 5761 6.757897 TTTCATCGGACTGCTTCAAATTAT 57.242 33.333 0.00 0.00 0.00 1.28
5468 5838 4.947388 GCTAGGGATTTAACATTCCACACA 59.053 41.667 0.00 0.00 33.43 3.72
5583 6079 0.383949 TTTCGCCACAGCAGAAAACC 59.616 50.000 0.00 0.00 38.03 3.27
5654 6159 4.836175 TGTATTTGAAAACCCTTTCCTCCC 59.164 41.667 0.00 0.00 40.31 4.30
5664 6169 6.706270 TCAGAGACTGACTGTATTTGAAAACC 59.294 38.462 0.00 0.00 35.39 3.27
5678 6183 1.946768 CGAGGAGGATCAGAGACTGAC 59.053 57.143 3.54 0.00 43.63 3.51
5679 6184 1.748939 GCGAGGAGGATCAGAGACTGA 60.749 57.143 3.95 3.95 44.99 3.41
5680 6185 0.667993 GCGAGGAGGATCAGAGACTG 59.332 60.000 0.00 0.00 36.25 3.51
5681 6186 0.467290 GGCGAGGAGGATCAGAGACT 60.467 60.000 0.00 0.00 36.25 3.24
5682 6187 0.753479 TGGCGAGGAGGATCAGAGAC 60.753 60.000 0.00 0.00 36.25 3.36
5683 6188 0.033109 TTGGCGAGGAGGATCAGAGA 60.033 55.000 0.00 0.00 36.25 3.10
5724 6236 4.712337 TGCCAAAAGACTAAAAGGACCAAA 59.288 37.500 0.00 0.00 0.00 3.28
5737 6249 2.547855 GGAACCAACCATGCCAAAAGAC 60.548 50.000 0.00 0.00 0.00 3.01
5748 6260 3.773418 TCATTTCGTAGGAACCAACCA 57.227 42.857 0.00 0.00 0.00 3.67
5749 6261 4.007659 ACATCATTTCGTAGGAACCAACC 58.992 43.478 0.00 0.00 0.00 3.77
5776 6289 3.526899 TGGAGAGTTTTCCCTGGTCATA 58.473 45.455 0.00 0.00 36.35 2.15
5778 6291 1.814429 TGGAGAGTTTTCCCTGGTCA 58.186 50.000 0.00 0.00 36.35 4.02
5784 6297 5.297547 GGTTTGATTTTGGAGAGTTTTCCC 58.702 41.667 0.00 0.00 36.35 3.97
5806 6319 2.100631 CCAAGCCACGCTACTTCGG 61.101 63.158 0.00 0.00 38.25 4.30
5816 6329 2.354203 CCAGAAGACTAGACCAAGCCAC 60.354 54.545 0.00 0.00 0.00 5.01
5870 6383 2.673775 TGGAGCATTTTCCTTGGTCA 57.326 45.000 5.39 0.00 42.06 4.02
5906 6419 2.159254 GCACTCACCTGAAAAAGCAACA 60.159 45.455 0.00 0.00 0.00 3.33
5907 6420 2.463876 GCACTCACCTGAAAAAGCAAC 58.536 47.619 0.00 0.00 0.00 4.17
5908 6421 1.408702 GGCACTCACCTGAAAAAGCAA 59.591 47.619 0.00 0.00 0.00 3.91
5909 6422 1.032014 GGCACTCACCTGAAAAAGCA 58.968 50.000 0.00 0.00 0.00 3.91
5910 6423 1.322442 AGGCACTCACCTGAAAAAGC 58.678 50.000 0.00 0.00 39.13 3.51
5911 6424 4.137543 AGTAAGGCACTCACCTGAAAAAG 58.862 43.478 0.00 0.00 39.93 2.27
5912 6425 4.164843 AGTAAGGCACTCACCTGAAAAA 57.835 40.909 0.00 0.00 39.93 1.94
5913 6426 3.857157 AGTAAGGCACTCACCTGAAAA 57.143 42.857 0.00 0.00 39.93 2.29
5914 6427 5.012664 TCAATAGTAAGGCACTCACCTGAAA 59.987 40.000 0.00 0.00 39.93 2.69
5915 6428 4.530553 TCAATAGTAAGGCACTCACCTGAA 59.469 41.667 0.00 0.00 39.93 3.02
5916 6429 4.093743 TCAATAGTAAGGCACTCACCTGA 58.906 43.478 0.00 0.00 39.93 3.86
5917 6430 4.471904 TCAATAGTAAGGCACTCACCTG 57.528 45.455 0.00 0.00 39.93 4.00
5918 6431 4.716784 TCATCAATAGTAAGGCACTCACCT 59.283 41.667 0.00 0.00 43.91 4.00
5919 6432 5.023533 TCATCAATAGTAAGGCACTCACC 57.976 43.478 0.00 0.00 38.49 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.