Multiple sequence alignment - TraesCS6D01G166600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G166600 chr6D 100.000 3575 0 0 1 3575 148481236 148484810 0.000000e+00 6602.0
1 TraesCS6D01G166600 chr6D 97.959 49 1 0 2888 2936 148484074 148484122 6.360000e-13 86.1
2 TraesCS6D01G166600 chr6D 97.959 49 1 0 2839 2887 148484123 148484171 6.360000e-13 86.1
3 TraesCS6D01G166600 chr6D 96.000 50 2 0 3416 3465 445778870 445778919 8.230000e-12 82.4
4 TraesCS6D01G166600 chr6D 92.727 55 2 2 3399 3453 397258688 397258740 1.060000e-10 78.7
5 TraesCS6D01G166600 chr6B 96.726 2993 43 21 3 2962 261451623 261454593 0.000000e+00 4933.0
6 TraesCS6D01G166600 chr6B 92.593 216 12 2 3215 3429 261463071 261463283 1.250000e-79 307.0
7 TraesCS6D01G166600 chr6B 90.708 226 18 2 2950 3172 261462847 261463072 7.500000e-77 298.0
8 TraesCS6D01G166600 chr6B 100.000 49 0 0 2839 2887 261454519 261454567 1.370000e-14 91.6
9 TraesCS6D01G166600 chr6A 95.737 2909 57 23 3 2887 199016671 199013806 0.000000e+00 4623.0
10 TraesCS6D01G166600 chr6A 96.341 82 3 0 2888 2969 199013854 199013773 6.230000e-28 135.0
11 TraesCS6D01G166600 chr7D 83.110 1492 250 2 1077 2567 451187824 451186334 0.000000e+00 1358.0
12 TraesCS6D01G166600 chr7D 75.306 409 90 10 2059 2460 166513418 166513014 6.090000e-43 185.0
13 TraesCS6D01G166600 chr7D 76.068 351 67 16 1020 1363 400941801 400942141 2.210000e-37 167.0
14 TraesCS6D01G166600 chr7B 82.745 1530 247 14 1044 2567 470837018 470835500 0.000000e+00 1347.0
15 TraesCS6D01G166600 chr7B 75.430 407 93 7 2059 2460 130746432 130746028 1.310000e-44 191.0
16 TraesCS6D01G166600 chr7A 83.215 1406 234 2 1071 2475 545934342 545935746 0.000000e+00 1288.0
17 TraesCS6D01G166600 chr7A 76.039 409 87 10 2059 2460 167903790 167903386 6.050000e-48 202.0
18 TraesCS6D01G166600 chr1D 74.064 1469 333 43 1020 2467 474375085 474376526 3.120000e-155 558.0
19 TraesCS6D01G166600 chr1A 73.615 1444 332 43 1046 2467 568730229 568728813 8.850000e-141 510.0
20 TraesCS6D01G166600 chr4B 74.713 609 142 12 1868 2470 502962226 502962828 9.840000e-66 261.0
21 TraesCS6D01G166600 chr4B 92.982 57 1 2 3417 3470 608968970 608968914 2.960000e-11 80.5
22 TraesCS6D01G166600 chr3D 75.714 350 70 14 1020 1363 255526042 255526382 1.030000e-35 161.0
23 TraesCS6D01G166600 chr3B 94.444 54 3 0 3416 3469 289597705 289597758 2.290000e-12 84.2
24 TraesCS6D01G166600 chr3B 83.750 80 10 3 3378 3454 44327867 44327788 4.950000e-09 73.1
25 TraesCS6D01G166600 chr3B 100.000 39 0 0 3416 3454 805418369 805418331 4.950000e-09 73.1
26 TraesCS6D01G166600 chr5A 90.476 63 3 3 3394 3454 334750129 334750068 2.960000e-11 80.5
27 TraesCS6D01G166600 chr5D 90.000 60 5 1 3410 3469 122418251 122418309 3.830000e-10 76.8
28 TraesCS6D01G166600 chr2B 89.831 59 6 0 3402 3460 354080899 354080841 3.830000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G166600 chr6D 148481236 148484810 3574 False 2258.066667 6602 98.639333 1 3575 3 chr6D.!!$F3 3574
1 TraesCS6D01G166600 chr6B 261451623 261454593 2970 False 2512.300000 4933 98.363000 3 2962 2 chr6B.!!$F1 2959
2 TraesCS6D01G166600 chr6A 199013773 199016671 2898 True 2379.000000 4623 96.039000 3 2969 2 chr6A.!!$R1 2966
3 TraesCS6D01G166600 chr7D 451186334 451187824 1490 True 1358.000000 1358 83.110000 1077 2567 1 chr7D.!!$R2 1490
4 TraesCS6D01G166600 chr7B 470835500 470837018 1518 True 1347.000000 1347 82.745000 1044 2567 1 chr7B.!!$R2 1523
5 TraesCS6D01G166600 chr7A 545934342 545935746 1404 False 1288.000000 1288 83.215000 1071 2475 1 chr7A.!!$F1 1404
6 TraesCS6D01G166600 chr1D 474375085 474376526 1441 False 558.000000 558 74.064000 1020 2467 1 chr1D.!!$F1 1447
7 TraesCS6D01G166600 chr1A 568728813 568730229 1416 True 510.000000 510 73.615000 1046 2467 1 chr1A.!!$R1 1421
8 TraesCS6D01G166600 chr4B 502962226 502962828 602 False 261.000000 261 74.713000 1868 2470 1 chr4B.!!$F1 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 263 0.552615 AAACCCATACCCCAGCTCCT 60.553 55.000 0.00 0.0 0.0 3.69 F
634 666 0.686112 AGAAGAAGGCGGAGGAGGAG 60.686 60.000 0.00 0.0 0.0 3.69 F
2055 2119 1.599518 CAAGGTTGGCGTGGCACTA 60.600 57.895 16.72 0.0 0.0 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1477 1541 0.981183 ATGTAAGTGTCCTCGCCCAA 59.019 50.0 0.00 0.0 0.0 4.12 R
2490 2554 0.884704 GGTTGTTCTGCTCCTTCGCA 60.885 55.0 0.00 0.0 38.4 5.10 R
3270 3342 0.033504 TCTTCTCACTGTGCCGAACC 59.966 55.0 2.12 0.0 0.0 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
75 76 2.877300 GCTGTCCCTGAAATCTGCAGAA 60.877 50.000 22.50 2.60 35.39 3.02
211 216 4.873129 TCCAATCGCTCGCTCGCC 62.873 66.667 0.00 0.00 0.00 5.54
255 263 0.552615 AAACCCATACCCCAGCTCCT 60.553 55.000 0.00 0.00 0.00 3.69
256 264 0.988678 AACCCATACCCCAGCTCCTC 60.989 60.000 0.00 0.00 0.00 3.71
257 265 2.150051 CCCATACCCCAGCTCCTCC 61.150 68.421 0.00 0.00 0.00 4.30
554 566 2.038837 CGGCTTCCGTTTCCCTTCC 61.039 63.158 0.00 0.00 42.73 3.46
560 572 2.675371 CGTTTCCCTTCCCCTCCC 59.325 66.667 0.00 0.00 0.00 4.30
589 608 4.961511 TTGCTCGCGACGGCAAGT 62.962 61.111 26.11 0.00 42.45 3.16
634 666 0.686112 AGAAGAAGGCGGAGGAGGAG 60.686 60.000 0.00 0.00 0.00 3.69
635 667 1.681486 GAAGAAGGCGGAGGAGGAGG 61.681 65.000 0.00 0.00 0.00 4.30
636 668 2.042843 GAAGGCGGAGGAGGAGGA 60.043 66.667 0.00 0.00 0.00 3.71
1206 1270 3.518998 ATCGCCGTCCACCTCTCG 61.519 66.667 0.00 0.00 0.00 4.04
2055 2119 1.599518 CAAGGTTGGCGTGGCACTA 60.600 57.895 16.72 0.00 0.00 2.74
2127 2191 2.265182 GCTTGGCCCGCTTGTGTTA 61.265 57.895 0.00 0.00 0.00 2.41
2475 2539 2.817396 GCTGTCTGGAAGGCGCTC 60.817 66.667 7.64 0.00 45.90 5.03
2490 2554 1.821061 CGCTCAGGTCAGTGAACCCT 61.821 60.000 4.04 0.00 40.42 4.34
2535 2599 3.448686 GATGGACGAGATCGACACATTT 58.551 45.455 9.58 0.00 43.02 2.32
2543 2607 0.323629 ATCGACACATTTCCGGTGGT 59.676 50.000 0.00 0.00 40.54 4.16
2567 2631 1.289530 TCCCAAGGTTTCCAAGGTTGT 59.710 47.619 0.00 0.00 0.00 3.32
2589 2653 3.754965 TGAATAGCTTTGCCTGTTCAGT 58.245 40.909 0.00 0.00 37.82 3.41
2591 2655 5.312895 TGAATAGCTTTGCCTGTTCAGTAA 58.687 37.500 0.00 0.00 37.82 2.24
2592 2656 5.945784 TGAATAGCTTTGCCTGTTCAGTAAT 59.054 36.000 0.00 0.00 37.82 1.89
2783 2848 1.899142 TGTGTTCCATGTGGATCGAGA 59.101 47.619 1.98 0.00 44.98 4.04
2830 2902 4.142945 TGCGTTGCATTAATTTTTCCATGC 60.143 37.500 0.00 0.00 42.07 4.06
2864 2936 2.029470 TGATTTGTTCCGAATGTTGGCC 60.029 45.455 0.00 0.00 0.00 5.36
2917 2989 0.098728 GTTCCGAATGTTGGCCATCG 59.901 55.000 17.64 17.64 31.75 3.84
2969 3041 2.885894 TCTGTCTTTGATGTGCATTGCA 59.114 40.909 7.38 7.38 35.60 4.08
2980 3052 1.893759 TGCATTGCACGCTAAAATCG 58.106 45.000 7.38 0.00 31.71 3.34
2981 3053 0.567509 GCATTGCACGCTAAAATCGC 59.432 50.000 3.15 0.00 0.00 4.58
2982 3054 1.191096 CATTGCACGCTAAAATCGCC 58.809 50.000 0.00 0.00 0.00 5.54
2983 3055 0.808125 ATTGCACGCTAAAATCGCCA 59.192 45.000 0.00 0.00 0.00 5.69
2984 3056 0.109964 TTGCACGCTAAAATCGCCAC 60.110 50.000 0.00 0.00 0.00 5.01
2985 3057 1.231296 TGCACGCTAAAATCGCCACA 61.231 50.000 0.00 0.00 0.00 4.17
2986 3058 0.793104 GCACGCTAAAATCGCCACAC 60.793 55.000 0.00 0.00 0.00 3.82
2987 3059 0.179200 CACGCTAAAATCGCCACACC 60.179 55.000 0.00 0.00 0.00 4.16
2988 3060 0.321298 ACGCTAAAATCGCCACACCT 60.321 50.000 0.00 0.00 0.00 4.00
2989 3061 1.066716 ACGCTAAAATCGCCACACCTA 60.067 47.619 0.00 0.00 0.00 3.08
2990 3062 2.004017 CGCTAAAATCGCCACACCTAA 58.996 47.619 0.00 0.00 0.00 2.69
2991 3063 2.030457 CGCTAAAATCGCCACACCTAAG 59.970 50.000 0.00 0.00 0.00 2.18
2992 3064 3.007635 GCTAAAATCGCCACACCTAAGT 58.992 45.455 0.00 0.00 0.00 2.24
2993 3065 3.439129 GCTAAAATCGCCACACCTAAGTT 59.561 43.478 0.00 0.00 0.00 2.66
2994 3066 3.915437 AAAATCGCCACACCTAAGTTG 57.085 42.857 0.00 0.00 0.00 3.16
2995 3067 2.851263 AATCGCCACACCTAAGTTGA 57.149 45.000 0.00 0.00 0.00 3.18
2996 3068 2.386661 ATCGCCACACCTAAGTTGAG 57.613 50.000 0.00 0.00 0.00 3.02
2997 3069 0.320374 TCGCCACACCTAAGTTGAGG 59.680 55.000 0.00 0.00 42.89 3.86
3006 3078 3.695830 CCTAAGTTGAGGTGTTAGCCA 57.304 47.619 0.00 0.00 0.00 4.75
3007 3079 3.335579 CCTAAGTTGAGGTGTTAGCCAC 58.664 50.000 0.00 0.00 43.74 5.01
3008 3080 3.244422 CCTAAGTTGAGGTGTTAGCCACA 60.244 47.826 0.00 0.00 46.44 4.17
3030 3102 3.872603 TGGCACGCCACAGGAAGT 61.873 61.111 6.67 0.00 41.89 3.01
3039 3111 4.643387 ACAGGAAGTGTGGCGGGC 62.643 66.667 0.00 0.00 38.28 6.13
3040 3112 4.641645 CAGGAAGTGTGGCGGGCA 62.642 66.667 0.00 0.00 0.00 5.36
3041 3113 3.884774 AGGAAGTGTGGCGGGCAA 61.885 61.111 5.57 0.00 0.00 4.52
3042 3114 2.909965 GGAAGTGTGGCGGGCAAA 60.910 61.111 5.57 0.00 0.00 3.68
3043 3115 2.494530 GGAAGTGTGGCGGGCAAAA 61.495 57.895 5.57 0.00 0.00 2.44
3044 3116 1.665442 GAAGTGTGGCGGGCAAAAT 59.335 52.632 5.57 0.00 0.00 1.82
3045 3117 0.667184 GAAGTGTGGCGGGCAAAATG 60.667 55.000 5.57 0.00 0.00 2.32
3046 3118 2.048316 GTGTGGCGGGCAAAATGG 60.048 61.111 5.57 0.00 0.00 3.16
3047 3119 3.309506 TGTGGCGGGCAAAATGGG 61.310 61.111 5.57 0.00 0.00 4.00
3048 3120 4.758251 GTGGCGGGCAAAATGGGC 62.758 66.667 5.57 0.00 0.00 5.36
3054 3126 4.001226 GGCAAAATGGGCGCCACA 62.001 61.111 30.85 23.70 45.52 4.17
3055 3127 2.265424 GCAAAATGGGCGCCACAT 59.735 55.556 30.85 24.87 35.80 3.21
3056 3128 1.515020 GCAAAATGGGCGCCACATA 59.485 52.632 30.85 11.81 35.80 2.29
3057 3129 0.104671 GCAAAATGGGCGCCACATAT 59.895 50.000 30.85 17.30 35.80 1.78
3058 3130 1.869342 GCAAAATGGGCGCCACATATC 60.869 52.381 30.85 10.31 35.80 1.63
3059 3131 1.682854 CAAAATGGGCGCCACATATCT 59.317 47.619 30.85 11.36 35.80 1.98
3060 3132 2.071778 AAATGGGCGCCACATATCTT 57.928 45.000 30.85 16.35 35.80 2.40
3061 3133 1.321474 AATGGGCGCCACATATCTTG 58.679 50.000 30.85 0.00 35.80 3.02
3062 3134 0.473755 ATGGGCGCCACATATCTTGA 59.526 50.000 30.85 0.00 35.80 3.02
3063 3135 0.179048 TGGGCGCCACATATCTTGAG 60.179 55.000 30.85 0.00 0.00 3.02
3064 3136 0.106708 GGGCGCCACATATCTTGAGA 59.893 55.000 30.85 0.00 0.00 3.27
3065 3137 1.475034 GGGCGCCACATATCTTGAGAA 60.475 52.381 30.85 0.00 0.00 2.87
3066 3138 2.498167 GGCGCCACATATCTTGAGAAT 58.502 47.619 24.80 0.00 0.00 2.40
3067 3139 2.481952 GGCGCCACATATCTTGAGAATC 59.518 50.000 24.80 0.00 0.00 2.52
3068 3140 3.397482 GCGCCACATATCTTGAGAATCT 58.603 45.455 0.00 0.00 34.92 2.40
3069 3141 3.431572 GCGCCACATATCTTGAGAATCTC 59.568 47.826 2.75 2.75 34.92 2.75
3070 3142 4.798924 GCGCCACATATCTTGAGAATCTCT 60.799 45.833 11.92 0.00 34.92 3.10
3071 3143 4.685165 CGCCACATATCTTGAGAATCTCTG 59.315 45.833 11.92 2.80 34.92 3.35
3072 3144 4.451774 GCCACATATCTTGAGAATCTCTGC 59.548 45.833 11.92 0.00 34.92 4.26
3073 3145 5.742546 GCCACATATCTTGAGAATCTCTGCT 60.743 44.000 11.92 0.00 34.92 4.24
3074 3146 5.697178 CCACATATCTTGAGAATCTCTGCTG 59.303 44.000 11.92 3.67 34.92 4.41
3075 3147 5.177881 CACATATCTTGAGAATCTCTGCTGC 59.822 44.000 11.92 0.00 34.92 5.25
3076 3148 3.908643 ATCTTGAGAATCTCTGCTGCA 57.091 42.857 11.92 0.88 34.92 4.41
3077 3149 3.248495 TCTTGAGAATCTCTGCTGCAG 57.752 47.619 23.31 23.31 34.92 4.41
3078 3150 2.830321 TCTTGAGAATCTCTGCTGCAGA 59.170 45.455 28.77 28.77 38.25 4.26
3079 3151 3.260128 TCTTGAGAATCTCTGCTGCAGAA 59.740 43.478 30.00 21.21 40.18 3.02
3080 3152 3.248495 TGAGAATCTCTGCTGCAGAAG 57.752 47.619 30.00 18.34 40.18 2.85
3081 3153 2.677325 TGAGAATCTCTGCTGCAGAAGC 60.677 50.000 30.00 19.28 44.72 3.86
3082 3154 4.944450 TGAGAATCTCTGCTGCAGAAGCT 61.944 47.826 30.00 22.89 44.75 3.74
3083 3155 6.705747 TGAGAATCTCTGCTGCAGAAGCTC 62.706 50.000 30.00 27.86 44.75 4.09
3090 3162 2.637521 CTGCAGAAGCTCCTTTGCA 58.362 52.632 8.42 12.03 43.62 4.08
3091 3163 0.240411 CTGCAGAAGCTCCTTTGCAC 59.760 55.000 8.42 0.00 41.23 4.57
3092 3164 0.179009 TGCAGAAGCTCCTTTGCACT 60.179 50.000 9.46 0.00 41.23 4.40
3093 3165 0.240411 GCAGAAGCTCCTTTGCACTG 59.760 55.000 6.77 0.00 40.05 3.66
3094 3166 1.602311 CAGAAGCTCCTTTGCACTGT 58.398 50.000 0.00 0.00 36.09 3.55
3095 3167 1.266175 CAGAAGCTCCTTTGCACTGTG 59.734 52.381 2.76 2.76 36.09 3.66
3096 3168 0.595095 GAAGCTCCTTTGCACTGTGG 59.405 55.000 10.21 0.00 34.99 4.17
3097 3169 1.458639 AAGCTCCTTTGCACTGTGGC 61.459 55.000 10.21 2.45 34.99 5.01
3098 3170 2.949106 CTCCTTTGCACTGTGGCG 59.051 61.111 10.21 0.00 36.28 5.69
3099 3171 1.597854 CTCCTTTGCACTGTGGCGA 60.598 57.895 10.21 0.00 36.28 5.54
3100 3172 1.572085 CTCCTTTGCACTGTGGCGAG 61.572 60.000 10.21 4.67 36.28 5.03
3101 3173 2.253452 CTTTGCACTGTGGCGAGC 59.747 61.111 10.21 0.00 36.28 5.03
3102 3174 3.259425 CTTTGCACTGTGGCGAGCC 62.259 63.158 10.21 7.26 36.28 4.70
3103 3175 4.560743 TTGCACTGTGGCGAGCCA 62.561 61.111 13.49 13.49 45.02 4.75
3111 3183 4.577677 TGGCGAGCCAAACCTGCA 62.578 61.111 15.24 0.00 44.12 4.41
3112 3184 3.064324 GGCGAGCCAAACCTGCAT 61.064 61.111 9.58 0.00 35.81 3.96
3113 3185 1.748879 GGCGAGCCAAACCTGCATA 60.749 57.895 9.58 0.00 35.81 3.14
3114 3186 1.429423 GCGAGCCAAACCTGCATAC 59.571 57.895 0.00 0.00 0.00 2.39
3115 3187 1.305219 GCGAGCCAAACCTGCATACA 61.305 55.000 0.00 0.00 0.00 2.29
3116 3188 0.729116 CGAGCCAAACCTGCATACAG 59.271 55.000 0.00 0.00 44.05 2.74
3117 3189 0.453390 GAGCCAAACCTGCATACAGC 59.547 55.000 0.00 0.00 43.02 4.40
3127 3199 3.792716 GCATACAGCACCAAACACC 57.207 52.632 0.00 0.00 44.79 4.16
3128 3200 1.247567 GCATACAGCACCAAACACCT 58.752 50.000 0.00 0.00 44.79 4.00
3129 3201 1.068333 GCATACAGCACCAAACACCTG 60.068 52.381 0.00 0.00 44.79 4.00
3130 3202 1.068333 CATACAGCACCAAACACCTGC 60.068 52.381 0.00 0.00 0.00 4.85
3131 3203 0.821711 TACAGCACCAAACACCTGCC 60.822 55.000 0.00 0.00 0.00 4.85
3132 3204 1.829533 CAGCACCAAACACCTGCCT 60.830 57.895 0.00 0.00 0.00 4.75
3133 3205 0.537143 CAGCACCAAACACCTGCCTA 60.537 55.000 0.00 0.00 0.00 3.93
3134 3206 0.184933 AGCACCAAACACCTGCCTAA 59.815 50.000 0.00 0.00 0.00 2.69
3135 3207 0.598065 GCACCAAACACCTGCCTAAG 59.402 55.000 0.00 0.00 0.00 2.18
3144 3216 4.625800 CTGCCTAAGGAGGTGTGC 57.374 61.111 0.00 0.00 45.78 4.57
3145 3217 1.078143 CTGCCTAAGGAGGTGTGCC 60.078 63.158 0.00 0.00 45.78 5.01
3146 3218 2.272471 GCCTAAGGAGGTGTGCCC 59.728 66.667 0.00 0.00 45.78 5.36
3147 3219 2.584608 CCTAAGGAGGTGTGCCCG 59.415 66.667 0.00 0.00 38.16 6.13
3148 3220 2.291043 CCTAAGGAGGTGTGCCCGT 61.291 63.158 0.00 0.00 38.16 5.28
3149 3221 0.974010 CCTAAGGAGGTGTGCCCGTA 60.974 60.000 0.00 0.00 38.16 4.02
3150 3222 0.899720 CTAAGGAGGTGTGCCCGTAA 59.100 55.000 0.00 0.00 38.74 3.18
3151 3223 0.609662 TAAGGAGGTGTGCCCGTAAC 59.390 55.000 0.00 0.00 38.74 2.50
3152 3224 1.412453 AAGGAGGTGTGCCCGTAACA 61.412 55.000 0.00 0.00 38.74 2.41
3153 3225 1.375523 GGAGGTGTGCCCGTAACAG 60.376 63.158 0.00 0.00 38.74 3.16
3154 3226 2.032071 AGGTGTGCCCGTAACAGC 59.968 61.111 4.05 4.05 44.45 4.40
3155 3227 2.032071 GGTGTGCCCGTAACAGCT 59.968 61.111 4.81 0.00 41.64 4.24
3156 3228 1.599797 GGTGTGCCCGTAACAGCTT 60.600 57.895 4.81 0.00 41.64 3.74
3157 3229 1.170290 GGTGTGCCCGTAACAGCTTT 61.170 55.000 4.81 0.00 41.64 3.51
3158 3230 0.040425 GTGTGCCCGTAACAGCTTTG 60.040 55.000 0.00 0.00 0.00 2.77
3159 3231 1.169661 TGTGCCCGTAACAGCTTTGG 61.170 55.000 0.00 0.00 0.00 3.28
3160 3232 2.265182 TGCCCGTAACAGCTTTGGC 61.265 57.895 0.00 0.00 39.33 4.52
3161 3233 2.867472 CCCGTAACAGCTTTGGCG 59.133 61.111 0.00 0.00 44.37 5.69
3162 3234 1.964373 CCCGTAACAGCTTTGGCGT 60.964 57.895 0.00 0.00 44.37 5.68
3163 3235 1.206578 CCGTAACAGCTTTGGCGTG 59.793 57.895 0.00 0.00 44.37 5.34
3164 3236 1.206578 CGTAACAGCTTTGGCGTGG 59.793 57.895 0.00 0.00 44.37 4.94
3165 3237 1.081442 GTAACAGCTTTGGCGTGGC 60.081 57.895 0.00 0.00 44.37 5.01
3166 3238 1.527148 TAACAGCTTTGGCGTGGCA 60.527 52.632 0.00 0.00 44.37 4.92
3167 3239 1.103987 TAACAGCTTTGGCGTGGCAA 61.104 50.000 4.57 4.57 44.37 4.52
3168 3240 1.747325 AACAGCTTTGGCGTGGCAAT 61.747 50.000 9.78 0.00 44.37 3.56
3169 3241 1.444895 CAGCTTTGGCGTGGCAATC 60.445 57.895 9.78 5.42 44.37 2.67
3170 3242 1.604593 AGCTTTGGCGTGGCAATCT 60.605 52.632 9.78 7.50 44.37 2.40
3171 3243 0.322456 AGCTTTGGCGTGGCAATCTA 60.322 50.000 9.78 0.00 44.37 1.98
3172 3244 0.740737 GCTTTGGCGTGGCAATCTAT 59.259 50.000 9.78 0.00 0.00 1.98
3173 3245 1.534595 GCTTTGGCGTGGCAATCTATG 60.535 52.381 9.78 0.69 0.00 2.23
3174 3246 2.016318 CTTTGGCGTGGCAATCTATGA 58.984 47.619 9.78 0.00 0.00 2.15
3175 3247 1.378531 TTGGCGTGGCAATCTATGAC 58.621 50.000 4.57 0.00 37.68 3.06
3176 3248 0.541392 TGGCGTGGCAATCTATGACT 59.459 50.000 0.00 0.00 38.19 3.41
3177 3249 0.940126 GGCGTGGCAATCTATGACTG 59.060 55.000 0.00 0.00 38.19 3.51
3178 3250 0.940126 GCGTGGCAATCTATGACTGG 59.060 55.000 0.00 0.00 38.19 4.00
3179 3251 1.586422 CGTGGCAATCTATGACTGGG 58.414 55.000 0.00 0.00 38.19 4.45
3180 3252 1.138859 CGTGGCAATCTATGACTGGGA 59.861 52.381 0.00 0.00 38.19 4.37
3181 3253 2.419990 CGTGGCAATCTATGACTGGGAA 60.420 50.000 0.00 0.00 38.19 3.97
3182 3254 2.945668 GTGGCAATCTATGACTGGGAAC 59.054 50.000 0.00 0.00 38.19 3.62
3183 3255 2.092429 TGGCAATCTATGACTGGGAACC 60.092 50.000 0.00 0.00 42.74 3.62
3197 3269 1.963172 GGAACCAAATAGCCCCGTAG 58.037 55.000 0.00 0.00 0.00 3.51
3198 3270 1.211212 GGAACCAAATAGCCCCGTAGT 59.789 52.381 0.00 0.00 0.00 2.73
3199 3271 2.356432 GGAACCAAATAGCCCCGTAGTT 60.356 50.000 0.00 0.00 0.00 2.24
3200 3272 3.118298 GGAACCAAATAGCCCCGTAGTTA 60.118 47.826 0.00 0.00 0.00 2.24
3201 3273 4.516323 GAACCAAATAGCCCCGTAGTTAA 58.484 43.478 0.00 0.00 0.00 2.01
3202 3274 4.146745 ACCAAATAGCCCCGTAGTTAAG 57.853 45.455 0.00 0.00 0.00 1.85
3203 3275 3.776417 ACCAAATAGCCCCGTAGTTAAGA 59.224 43.478 0.00 0.00 0.00 2.10
3204 3276 4.411212 ACCAAATAGCCCCGTAGTTAAGAT 59.589 41.667 0.00 0.00 0.00 2.40
3205 3277 5.603813 ACCAAATAGCCCCGTAGTTAAGATA 59.396 40.000 0.00 0.00 0.00 1.98
3206 3278 6.271624 ACCAAATAGCCCCGTAGTTAAGATAT 59.728 38.462 0.00 0.00 0.00 1.63
3207 3279 6.817140 CCAAATAGCCCCGTAGTTAAGATATC 59.183 42.308 0.00 0.00 0.00 1.63
3208 3280 7.383687 CAAATAGCCCCGTAGTTAAGATATCA 58.616 38.462 5.32 0.00 0.00 2.15
3209 3281 7.735326 AATAGCCCCGTAGTTAAGATATCAT 57.265 36.000 5.32 0.00 0.00 2.45
3210 3282 5.662674 AGCCCCGTAGTTAAGATATCATC 57.337 43.478 5.32 0.00 0.00 2.92
3211 3283 5.334421 AGCCCCGTAGTTAAGATATCATCT 58.666 41.667 5.32 0.51 42.61 2.90
3212 3284 5.186021 AGCCCCGTAGTTAAGATATCATCTG 59.814 44.000 5.32 0.00 40.13 2.90
3213 3285 5.185249 GCCCCGTAGTTAAGATATCATCTGA 59.815 44.000 5.32 0.00 40.13 3.27
3214 3286 6.127310 GCCCCGTAGTTAAGATATCATCTGAT 60.127 42.308 5.32 0.00 40.13 2.90
3215 3287 7.068348 GCCCCGTAGTTAAGATATCATCTGATA 59.932 40.741 5.32 2.54 40.13 2.15
3216 3288 8.967918 CCCCGTAGTTAAGATATCATCTGATAA 58.032 37.037 5.32 0.00 40.09 1.75
3226 3298 8.532186 AGATATCATCTGATAATAGAACGGCT 57.468 34.615 5.32 0.00 40.09 5.52
3227 3299 8.412456 AGATATCATCTGATAATAGAACGGCTG 58.588 37.037 5.32 0.00 40.09 4.85
3228 3300 5.139435 TCATCTGATAATAGAACGGCTGG 57.861 43.478 0.00 0.00 0.00 4.85
3229 3301 4.021104 TCATCTGATAATAGAACGGCTGGG 60.021 45.833 0.00 0.00 0.00 4.45
3230 3302 3.305720 TCTGATAATAGAACGGCTGGGT 58.694 45.455 0.00 0.00 0.00 4.51
3231 3303 3.321111 TCTGATAATAGAACGGCTGGGTC 59.679 47.826 0.00 0.00 0.00 4.46
3232 3304 2.035449 TGATAATAGAACGGCTGGGTCG 59.965 50.000 0.00 0.00 36.42 4.79
3238 3310 2.590575 ACGGCTGGGTCGTTGTTG 60.591 61.111 0.00 0.00 42.79 3.33
3239 3311 2.590575 CGGCTGGGTCGTTGTTGT 60.591 61.111 0.00 0.00 0.00 3.32
3240 3312 2.184167 CGGCTGGGTCGTTGTTGTT 61.184 57.895 0.00 0.00 0.00 2.83
3241 3313 1.358759 GGCTGGGTCGTTGTTGTTG 59.641 57.895 0.00 0.00 0.00 3.33
3242 3314 1.381165 GGCTGGGTCGTTGTTGTTGT 61.381 55.000 0.00 0.00 0.00 3.32
3243 3315 0.454196 GCTGGGTCGTTGTTGTTGTT 59.546 50.000 0.00 0.00 0.00 2.83
3244 3316 1.797348 GCTGGGTCGTTGTTGTTGTTG 60.797 52.381 0.00 0.00 0.00 3.33
3245 3317 1.740585 CTGGGTCGTTGTTGTTGTTGA 59.259 47.619 0.00 0.00 0.00 3.18
3246 3318 1.740585 TGGGTCGTTGTTGTTGTTGAG 59.259 47.619 0.00 0.00 0.00 3.02
3247 3319 2.011222 GGGTCGTTGTTGTTGTTGAGA 58.989 47.619 0.00 0.00 0.00 3.27
3248 3320 2.616842 GGGTCGTTGTTGTTGTTGAGAT 59.383 45.455 0.00 0.00 0.00 2.75
3249 3321 3.066203 GGGTCGTTGTTGTTGTTGAGATT 59.934 43.478 0.00 0.00 0.00 2.40
3250 3322 4.439563 GGGTCGTTGTTGTTGTTGAGATTT 60.440 41.667 0.00 0.00 0.00 2.17
3251 3323 4.733405 GGTCGTTGTTGTTGTTGAGATTTC 59.267 41.667 0.00 0.00 0.00 2.17
3252 3324 5.328691 GTCGTTGTTGTTGTTGAGATTTCA 58.671 37.500 0.00 0.00 0.00 2.69
3253 3325 5.971202 GTCGTTGTTGTTGTTGAGATTTCAT 59.029 36.000 0.00 0.00 32.27 2.57
3254 3326 6.472163 GTCGTTGTTGTTGTTGAGATTTCATT 59.528 34.615 0.00 0.00 32.27 2.57
3255 3327 7.642194 GTCGTTGTTGTTGTTGAGATTTCATTA 59.358 33.333 0.00 0.00 32.27 1.90
3256 3328 8.184848 TCGTTGTTGTTGTTGAGATTTCATTAA 58.815 29.630 0.00 0.00 32.27 1.40
3257 3329 8.802856 CGTTGTTGTTGTTGAGATTTCATTAAA 58.197 29.630 0.00 0.00 32.27 1.52
3277 3349 9.323963 CATTAAAAATTTGTTATTTGGTTCGGC 57.676 29.630 0.00 0.00 0.00 5.54
3278 3350 6.927294 AAAAATTTGTTATTTGGTTCGGCA 57.073 29.167 0.00 0.00 0.00 5.69
3279 3351 5.915812 AAATTTGTTATTTGGTTCGGCAC 57.084 34.783 0.00 0.00 0.00 5.01
3280 3352 4.592485 ATTTGTTATTTGGTTCGGCACA 57.408 36.364 0.00 0.00 0.00 4.57
3281 3353 3.634568 TTGTTATTTGGTTCGGCACAG 57.365 42.857 0.00 0.00 0.00 3.66
3282 3354 2.577700 TGTTATTTGGTTCGGCACAGT 58.422 42.857 0.00 0.00 0.00 3.55
3283 3355 2.292016 TGTTATTTGGTTCGGCACAGTG 59.708 45.455 0.00 0.00 0.00 3.66
3284 3356 2.550606 GTTATTTGGTTCGGCACAGTGA 59.449 45.455 4.15 0.00 0.00 3.41
3285 3357 1.238439 ATTTGGTTCGGCACAGTGAG 58.762 50.000 4.15 0.00 0.00 3.51
3286 3358 0.179234 TTTGGTTCGGCACAGTGAGA 59.821 50.000 4.15 0.00 0.00 3.27
3287 3359 0.179234 TTGGTTCGGCACAGTGAGAA 59.821 50.000 4.15 6.27 0.00 2.87
3288 3360 0.249868 TGGTTCGGCACAGTGAGAAG 60.250 55.000 4.15 0.00 0.00 2.85
3289 3361 0.033504 GGTTCGGCACAGTGAGAAGA 59.966 55.000 4.15 0.00 0.00 2.87
3290 3362 1.338200 GGTTCGGCACAGTGAGAAGAT 60.338 52.381 4.15 0.00 0.00 2.40
3291 3363 1.728971 GTTCGGCACAGTGAGAAGATG 59.271 52.381 4.15 0.00 0.00 2.90
3292 3364 0.247460 TCGGCACAGTGAGAAGATGG 59.753 55.000 4.15 0.00 0.00 3.51
3293 3365 0.036952 CGGCACAGTGAGAAGATGGT 60.037 55.000 4.15 0.00 0.00 3.55
3294 3366 1.204704 CGGCACAGTGAGAAGATGGTA 59.795 52.381 4.15 0.00 0.00 3.25
3295 3367 2.159043 CGGCACAGTGAGAAGATGGTAT 60.159 50.000 4.15 0.00 0.00 2.73
3296 3368 3.201290 GGCACAGTGAGAAGATGGTATG 58.799 50.000 4.15 0.00 0.00 2.39
3297 3369 2.611292 GCACAGTGAGAAGATGGTATGC 59.389 50.000 4.15 0.00 0.00 3.14
3298 3370 2.862536 CACAGTGAGAAGATGGTATGCG 59.137 50.000 0.00 0.00 0.00 4.73
3299 3371 2.497675 ACAGTGAGAAGATGGTATGCGT 59.502 45.455 0.00 0.00 0.00 5.24
3300 3372 3.055819 ACAGTGAGAAGATGGTATGCGTT 60.056 43.478 0.00 0.00 0.00 4.84
3301 3373 3.935203 CAGTGAGAAGATGGTATGCGTTT 59.065 43.478 0.00 0.00 0.00 3.60
3302 3374 4.393062 CAGTGAGAAGATGGTATGCGTTTT 59.607 41.667 0.00 0.00 0.00 2.43
3303 3375 5.580691 CAGTGAGAAGATGGTATGCGTTTTA 59.419 40.000 0.00 0.00 0.00 1.52
3304 3376 6.258727 CAGTGAGAAGATGGTATGCGTTTTAT 59.741 38.462 0.00 0.00 0.00 1.40
3305 3377 6.823689 AGTGAGAAGATGGTATGCGTTTTATT 59.176 34.615 0.00 0.00 0.00 1.40
3306 3378 7.336931 AGTGAGAAGATGGTATGCGTTTTATTT 59.663 33.333 0.00 0.00 0.00 1.40
3307 3379 7.968405 GTGAGAAGATGGTATGCGTTTTATTTT 59.032 33.333 0.00 0.00 0.00 1.82
3308 3380 8.519526 TGAGAAGATGGTATGCGTTTTATTTTT 58.480 29.630 0.00 0.00 0.00 1.94
3309 3381 9.997482 GAGAAGATGGTATGCGTTTTATTTTTA 57.003 29.630 0.00 0.00 0.00 1.52
3329 3401 8.451908 TTTTTATTATTGGTTTGGTTTGGTGG 57.548 30.769 0.00 0.00 0.00 4.61
3330 3402 4.632327 ATTATTGGTTTGGTTTGGTGGG 57.368 40.909 0.00 0.00 0.00 4.61
3331 3403 1.886422 ATTGGTTTGGTTTGGTGGGT 58.114 45.000 0.00 0.00 0.00 4.51
3332 3404 0.905357 TTGGTTTGGTTTGGTGGGTG 59.095 50.000 0.00 0.00 0.00 4.61
3333 3405 0.041238 TGGTTTGGTTTGGTGGGTGA 59.959 50.000 0.00 0.00 0.00 4.02
3334 3406 1.196012 GGTTTGGTTTGGTGGGTGAA 58.804 50.000 0.00 0.00 0.00 3.18
3335 3407 1.555533 GGTTTGGTTTGGTGGGTGAAA 59.444 47.619 0.00 0.00 0.00 2.69
3336 3408 2.027100 GGTTTGGTTTGGTGGGTGAAAA 60.027 45.455 0.00 0.00 0.00 2.29
3337 3409 3.559384 GGTTTGGTTTGGTGGGTGAAAAA 60.559 43.478 0.00 0.00 0.00 1.94
3338 3410 3.618690 TTGGTTTGGTGGGTGAAAAAG 57.381 42.857 0.00 0.00 0.00 2.27
3339 3411 2.821437 TGGTTTGGTGGGTGAAAAAGA 58.179 42.857 0.00 0.00 0.00 2.52
3340 3412 3.379452 TGGTTTGGTGGGTGAAAAAGAT 58.621 40.909 0.00 0.00 0.00 2.40
3341 3413 3.133721 TGGTTTGGTGGGTGAAAAAGATG 59.866 43.478 0.00 0.00 0.00 2.90
3342 3414 3.386402 GGTTTGGTGGGTGAAAAAGATGA 59.614 43.478 0.00 0.00 0.00 2.92
3343 3415 4.040339 GGTTTGGTGGGTGAAAAAGATGAT 59.960 41.667 0.00 0.00 0.00 2.45
3344 3416 4.870123 TTGGTGGGTGAAAAAGATGATG 57.130 40.909 0.00 0.00 0.00 3.07
3345 3417 3.843422 TGGTGGGTGAAAAAGATGATGT 58.157 40.909 0.00 0.00 0.00 3.06
3346 3418 3.573538 TGGTGGGTGAAAAAGATGATGTG 59.426 43.478 0.00 0.00 0.00 3.21
3347 3419 3.573967 GGTGGGTGAAAAAGATGATGTGT 59.426 43.478 0.00 0.00 0.00 3.72
3348 3420 4.549458 GTGGGTGAAAAAGATGATGTGTG 58.451 43.478 0.00 0.00 0.00 3.82
3349 3421 4.037923 GTGGGTGAAAAAGATGATGTGTGT 59.962 41.667 0.00 0.00 0.00 3.72
3350 3422 4.648762 TGGGTGAAAAAGATGATGTGTGTT 59.351 37.500 0.00 0.00 0.00 3.32
3351 3423 5.128499 TGGGTGAAAAAGATGATGTGTGTTT 59.872 36.000 0.00 0.00 0.00 2.83
3352 3424 6.048509 GGGTGAAAAAGATGATGTGTGTTTT 58.951 36.000 0.00 0.00 0.00 2.43
3353 3425 7.147828 TGGGTGAAAAAGATGATGTGTGTTTTA 60.148 33.333 0.00 0.00 0.00 1.52
3354 3426 7.872483 GGGTGAAAAAGATGATGTGTGTTTTAT 59.128 33.333 0.00 0.00 0.00 1.40
3355 3427 9.260002 GGTGAAAAAGATGATGTGTGTTTTATT 57.740 29.630 0.00 0.00 0.00 1.40
3379 3451 9.891828 ATTTTGTATATATAATGCGGTGTGTTG 57.108 29.630 0.00 0.00 0.00 3.33
3380 3452 8.439993 TTTGTATATATAATGCGGTGTGTTGT 57.560 30.769 0.00 0.00 0.00 3.32
3381 3453 8.439993 TTGTATATATAATGCGGTGTGTTGTT 57.560 30.769 0.00 0.00 0.00 2.83
3382 3454 7.856556 TGTATATATAATGCGGTGTGTTGTTG 58.143 34.615 0.00 0.00 0.00 3.33
3383 3455 4.630894 ATATAATGCGGTGTGTTGTTGG 57.369 40.909 0.00 0.00 0.00 3.77
3384 3456 0.955178 TAATGCGGTGTGTTGTTGGG 59.045 50.000 0.00 0.00 0.00 4.12
3385 3457 2.362329 AATGCGGTGTGTTGTTGGGC 62.362 55.000 0.00 0.00 0.00 5.36
3386 3458 3.216292 GCGGTGTGTTGTTGGGCT 61.216 61.111 0.00 0.00 0.00 5.19
3387 3459 2.781158 GCGGTGTGTTGTTGGGCTT 61.781 57.895 0.00 0.00 0.00 4.35
3388 3460 1.813192 CGGTGTGTTGTTGGGCTTT 59.187 52.632 0.00 0.00 0.00 3.51
3389 3461 0.174617 CGGTGTGTTGTTGGGCTTTT 59.825 50.000 0.00 0.00 0.00 2.27
3390 3462 1.404851 CGGTGTGTTGTTGGGCTTTTT 60.405 47.619 0.00 0.00 0.00 1.94
3391 3463 2.006169 GGTGTGTTGTTGGGCTTTTTG 58.994 47.619 0.00 0.00 0.00 2.44
3392 3464 2.006169 GTGTGTTGTTGGGCTTTTTGG 58.994 47.619 0.00 0.00 0.00 3.28
3393 3465 1.013596 GTGTTGTTGGGCTTTTTGGC 58.986 50.000 0.00 0.00 40.96 4.52
3394 3466 0.615331 TGTTGTTGGGCTTTTTGGCA 59.385 45.000 0.00 0.00 43.83 4.92
3395 3467 1.298602 GTTGTTGGGCTTTTTGGCAG 58.701 50.000 0.00 0.00 43.83 4.85
3396 3468 0.908198 TTGTTGGGCTTTTTGGCAGT 59.092 45.000 0.00 0.00 43.83 4.40
3397 3469 0.177604 TGTTGGGCTTTTTGGCAGTG 59.822 50.000 0.00 0.00 43.83 3.66
3398 3470 0.177836 GTTGGGCTTTTTGGCAGTGT 59.822 50.000 0.00 0.00 43.83 3.55
3399 3471 1.410882 GTTGGGCTTTTTGGCAGTGTA 59.589 47.619 0.00 0.00 43.83 2.90
3400 3472 1.781786 TGGGCTTTTTGGCAGTGTAA 58.218 45.000 0.00 0.00 43.83 2.41
3401 3473 2.324541 TGGGCTTTTTGGCAGTGTAAT 58.675 42.857 0.00 0.00 43.83 1.89
3402 3474 2.703007 TGGGCTTTTTGGCAGTGTAATT 59.297 40.909 0.00 0.00 43.83 1.40
3403 3475 3.135530 TGGGCTTTTTGGCAGTGTAATTT 59.864 39.130 0.00 0.00 43.83 1.82
3404 3476 4.133820 GGGCTTTTTGGCAGTGTAATTTT 58.866 39.130 0.00 0.00 43.83 1.82
3405 3477 4.024133 GGGCTTTTTGGCAGTGTAATTTTG 60.024 41.667 0.00 0.00 43.83 2.44
3406 3478 4.574421 GGCTTTTTGGCAGTGTAATTTTGT 59.426 37.500 0.00 0.00 41.37 2.83
3407 3479 5.500825 GCTTTTTGGCAGTGTAATTTTGTG 58.499 37.500 0.00 0.00 0.00 3.33
3408 3480 5.064579 GCTTTTTGGCAGTGTAATTTTGTGT 59.935 36.000 0.00 0.00 0.00 3.72
3409 3481 6.403092 GCTTTTTGGCAGTGTAATTTTGTGTT 60.403 34.615 0.00 0.00 0.00 3.32
3410 3482 7.201565 GCTTTTTGGCAGTGTAATTTTGTGTTA 60.202 33.333 0.00 0.00 0.00 2.41
3411 3483 8.723942 TTTTTGGCAGTGTAATTTTGTGTTAT 57.276 26.923 0.00 0.00 0.00 1.89
3412 3484 7.938563 TTTGGCAGTGTAATTTTGTGTTATC 57.061 32.000 0.00 0.00 0.00 1.75
3413 3485 6.892658 TGGCAGTGTAATTTTGTGTTATCT 57.107 33.333 0.00 0.00 0.00 1.98
3414 3486 7.987750 TGGCAGTGTAATTTTGTGTTATCTA 57.012 32.000 0.00 0.00 0.00 1.98
3415 3487 7.812648 TGGCAGTGTAATTTTGTGTTATCTAC 58.187 34.615 0.00 0.00 0.00 2.59
3416 3488 7.663905 TGGCAGTGTAATTTTGTGTTATCTACT 59.336 33.333 0.00 0.00 0.00 2.57
3417 3489 9.158233 GGCAGTGTAATTTTGTGTTATCTACTA 57.842 33.333 0.00 0.00 0.00 1.82
3418 3490 9.968743 GCAGTGTAATTTTGTGTTATCTACTAC 57.031 33.333 0.00 0.00 0.00 2.73
3422 3494 9.880157 TGTAATTTTGTGTTATCTACTACTCCC 57.120 33.333 0.00 0.00 0.00 4.30
3425 3497 6.786967 TTTGTGTTATCTACTACTCCCTCC 57.213 41.667 0.00 0.00 0.00 4.30
3426 3498 4.458397 TGTGTTATCTACTACTCCCTCCG 58.542 47.826 0.00 0.00 0.00 4.63
3427 3499 4.080129 TGTGTTATCTACTACTCCCTCCGT 60.080 45.833 0.00 0.00 0.00 4.69
3428 3500 4.514816 GTGTTATCTACTACTCCCTCCGTC 59.485 50.000 0.00 0.00 0.00 4.79
3429 3501 2.955342 ATCTACTACTCCCTCCGTCC 57.045 55.000 0.00 0.00 0.00 4.79
3430 3502 0.842635 TCTACTACTCCCTCCGTCCC 59.157 60.000 0.00 0.00 0.00 4.46
3431 3503 0.549950 CTACTACTCCCTCCGTCCCA 59.450 60.000 0.00 0.00 0.00 4.37
3432 3504 1.145325 CTACTACTCCCTCCGTCCCAT 59.855 57.143 0.00 0.00 0.00 4.00
3433 3505 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3434 3506 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3435 3507 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3436 3508 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
3437 3509 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3438 3510 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3439 3511 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3440 3512 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3441 3513 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3442 3514 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3443 3515 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
3444 3516 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
3445 3517 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
3446 3518 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
3447 3519 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
3448 3520 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
3449 3521 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
3484 3556 7.414222 TTTACACTAGGGAGTACTTATGTGG 57.586 40.000 0.00 0.00 33.32 4.17
3485 3557 4.287552 ACACTAGGGAGTACTTATGTGGG 58.712 47.826 0.00 0.00 33.32 4.61
3486 3558 4.016851 ACACTAGGGAGTACTTATGTGGGA 60.017 45.833 0.00 0.00 33.32 4.37
3487 3559 4.960469 CACTAGGGAGTACTTATGTGGGAA 59.040 45.833 0.00 0.00 33.32 3.97
3488 3560 5.424252 CACTAGGGAGTACTTATGTGGGAAA 59.576 44.000 0.00 0.00 33.32 3.13
3489 3561 6.099845 CACTAGGGAGTACTTATGTGGGAAAT 59.900 42.308 0.00 0.00 33.32 2.17
3490 3562 6.677076 ACTAGGGAGTACTTATGTGGGAAATT 59.323 38.462 0.00 0.00 32.65 1.82
3491 3563 6.402981 AGGGAGTACTTATGTGGGAAATTT 57.597 37.500 0.00 0.00 0.00 1.82
3492 3564 6.424032 AGGGAGTACTTATGTGGGAAATTTC 58.576 40.000 9.83 9.83 0.00 2.17
3493 3565 6.217693 AGGGAGTACTTATGTGGGAAATTTCT 59.782 38.462 17.42 0.33 0.00 2.52
3494 3566 6.890268 GGGAGTACTTATGTGGGAAATTTCTT 59.110 38.462 17.42 1.73 0.00 2.52
3495 3567 7.148069 GGGAGTACTTATGTGGGAAATTTCTTG 60.148 40.741 17.42 2.95 0.00 3.02
3496 3568 7.148069 GGAGTACTTATGTGGGAAATTTCTTGG 60.148 40.741 17.42 3.41 0.00 3.61
3497 3569 6.663523 AGTACTTATGTGGGAAATTTCTTGGG 59.336 38.462 17.42 3.84 0.00 4.12
3498 3570 4.222810 ACTTATGTGGGAAATTTCTTGGGC 59.777 41.667 17.42 0.79 0.00 5.36
3499 3571 2.397044 TGTGGGAAATTTCTTGGGCT 57.603 45.000 17.42 0.00 0.00 5.19
3500 3572 1.969923 TGTGGGAAATTTCTTGGGCTG 59.030 47.619 17.42 0.00 0.00 4.85
3501 3573 1.276138 GTGGGAAATTTCTTGGGCTGG 59.724 52.381 17.42 0.00 0.00 4.85
3502 3574 1.132881 TGGGAAATTTCTTGGGCTGGT 60.133 47.619 17.42 0.00 0.00 4.00
3503 3575 1.276138 GGGAAATTTCTTGGGCTGGTG 59.724 52.381 17.42 0.00 0.00 4.17
3504 3576 1.276138 GGAAATTTCTTGGGCTGGTGG 59.724 52.381 17.42 0.00 0.00 4.61
3505 3577 0.686789 AAATTTCTTGGGCTGGTGGC 59.313 50.000 0.00 0.00 40.90 5.01
3516 3588 2.867109 GCTGGTGGCCATATCTATGT 57.133 50.000 9.72 0.00 30.82 2.29
3517 3589 3.146104 GCTGGTGGCCATATCTATGTT 57.854 47.619 9.72 0.00 30.82 2.71
3518 3590 2.816087 GCTGGTGGCCATATCTATGTTG 59.184 50.000 9.72 0.00 30.82 3.33
3519 3591 3.415212 CTGGTGGCCATATCTATGTTGG 58.585 50.000 9.72 0.00 30.82 3.77
3520 3592 2.782925 TGGTGGCCATATCTATGTTGGT 59.217 45.455 9.72 0.00 32.90 3.67
3521 3593 3.149196 GGTGGCCATATCTATGTTGGTG 58.851 50.000 9.72 0.00 32.90 4.17
3522 3594 3.435026 GGTGGCCATATCTATGTTGGTGT 60.435 47.826 9.72 0.00 32.90 4.16
3523 3595 4.207165 GTGGCCATATCTATGTTGGTGTT 58.793 43.478 9.72 0.00 32.90 3.32
3524 3596 5.373222 GTGGCCATATCTATGTTGGTGTTA 58.627 41.667 9.72 0.00 32.90 2.41
3525 3597 5.238650 GTGGCCATATCTATGTTGGTGTTAC 59.761 44.000 9.72 0.00 32.90 2.50
3526 3598 5.104318 TGGCCATATCTATGTTGGTGTTACA 60.104 40.000 0.00 0.00 32.90 2.41
3527 3599 5.470098 GGCCATATCTATGTTGGTGTTACAG 59.530 44.000 0.00 0.00 32.90 2.74
3528 3600 6.055588 GCCATATCTATGTTGGTGTTACAGT 58.944 40.000 0.00 0.00 32.90 3.55
3529 3601 6.017934 GCCATATCTATGTTGGTGTTACAGTG 60.018 42.308 0.00 0.00 32.90 3.66
3530 3602 7.047891 CCATATCTATGTTGGTGTTACAGTGT 58.952 38.462 0.00 0.00 31.82 3.55
3531 3603 7.224753 CCATATCTATGTTGGTGTTACAGTGTC 59.775 40.741 0.00 0.00 31.82 3.67
3532 3604 5.538849 TCTATGTTGGTGTTACAGTGTCA 57.461 39.130 0.00 0.00 0.00 3.58
3533 3605 6.109156 TCTATGTTGGTGTTACAGTGTCAT 57.891 37.500 0.00 0.00 0.00 3.06
3534 3606 7.234661 TCTATGTTGGTGTTACAGTGTCATA 57.765 36.000 0.00 0.00 0.00 2.15
3535 3607 7.847096 TCTATGTTGGTGTTACAGTGTCATAT 58.153 34.615 0.00 0.00 0.00 1.78
3536 3608 6.741992 ATGTTGGTGTTACAGTGTCATATG 57.258 37.500 0.00 0.00 0.00 1.78
3537 3609 5.616270 TGTTGGTGTTACAGTGTCATATGT 58.384 37.500 0.00 0.09 0.00 2.29
3538 3610 6.058833 TGTTGGTGTTACAGTGTCATATGTT 58.941 36.000 0.00 0.00 0.00 2.71
3539 3611 7.217906 TGTTGGTGTTACAGTGTCATATGTTA 58.782 34.615 0.00 0.00 0.00 2.41
3540 3612 7.386573 TGTTGGTGTTACAGTGTCATATGTTAG 59.613 37.037 0.00 0.00 0.00 2.34
3541 3613 7.234661 TGGTGTTACAGTGTCATATGTTAGA 57.765 36.000 0.00 0.00 0.00 2.10
3542 3614 7.847096 TGGTGTTACAGTGTCATATGTTAGAT 58.153 34.615 0.00 0.00 0.00 1.98
3543 3615 8.318412 TGGTGTTACAGTGTCATATGTTAGATT 58.682 33.333 0.00 0.00 0.00 2.40
3544 3616 9.162764 GGTGTTACAGTGTCATATGTTAGATTT 57.837 33.333 0.00 0.00 0.00 2.17
3568 3640 5.673337 TTTTAGGTGATGAGATAATGCGC 57.327 39.130 0.00 0.00 0.00 6.09
3569 3641 1.788258 AGGTGATGAGATAATGCGCG 58.212 50.000 0.00 0.00 0.00 6.86
3570 3642 0.792640 GGTGATGAGATAATGCGCGG 59.207 55.000 8.83 0.00 0.00 6.46
3571 3643 0.792640 GTGATGAGATAATGCGCGGG 59.207 55.000 8.83 0.00 0.00 6.13
3572 3644 0.678950 TGATGAGATAATGCGCGGGA 59.321 50.000 8.83 0.00 0.00 5.14
3573 3645 1.071605 GATGAGATAATGCGCGGGAC 58.928 55.000 8.83 0.00 0.00 4.46
3574 3646 0.681733 ATGAGATAATGCGCGGGACT 59.318 50.000 8.83 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.169561 GCGTATTTTGCGAACAATATCACAG 59.830 40.000 0.00 0.00 35.21 3.66
1 2 5.025190 GCGTATTTTGCGAACAATATCACA 58.975 37.500 0.00 0.00 35.21 3.58
75 76 4.584743 GTGGTTCCCATGTTCTCTTTTTCT 59.415 41.667 0.00 0.00 35.28 2.52
178 183 1.302271 GGAGTTTTCCGGCGGAACT 60.302 57.895 38.69 33.11 41.87 3.01
211 216 3.934391 GAGAACGTGGTGGGAGCGG 62.934 68.421 0.00 0.00 0.00 5.52
212 217 2.432628 GAGAACGTGGTGGGAGCG 60.433 66.667 0.00 0.00 0.00 5.03
213 218 1.079750 GAGAGAACGTGGTGGGAGC 60.080 63.158 0.00 0.00 0.00 4.70
214 219 1.592223 GGAGAGAACGTGGTGGGAG 59.408 63.158 0.00 0.00 0.00 4.30
255 263 2.161831 CGTGATTCGCTGCTTTGGA 58.838 52.632 0.00 0.00 0.00 3.53
256 264 4.751539 CGTGATTCGCTGCTTTGG 57.248 55.556 0.00 0.00 0.00 3.28
309 317 3.869272 CCTCGCATGCGCTGGTTC 61.869 66.667 34.45 0.00 39.59 3.62
560 572 4.410400 GAGCAACACGGGAGGGGG 62.410 72.222 0.00 0.00 37.82 5.40
589 608 1.169577 GCACTCGTCTCTCTCCTGAA 58.830 55.000 0.00 0.00 0.00 3.02
1477 1541 0.981183 ATGTAAGTGTCCTCGCCCAA 59.019 50.000 0.00 0.00 0.00 4.12
2055 2119 1.528824 CGCCATGAGGTCCTTGGAT 59.471 57.895 13.13 0.00 41.31 3.41
2127 2191 1.220206 CAGCTGCTCCGAGAATGGT 59.780 57.895 0.00 0.00 0.00 3.55
2490 2554 0.884704 GGTTGTTCTGCTCCTTCGCA 60.885 55.000 0.00 0.00 38.40 5.10
2567 2631 4.144297 ACTGAACAGGCAAAGCTATTCAA 58.856 39.130 6.76 0.00 0.00 2.69
2589 2653 3.039743 TGCTGTTCCGGGTGGTATATTA 58.960 45.455 0.00 0.00 36.30 0.98
2591 2655 1.502690 TGCTGTTCCGGGTGGTATAT 58.497 50.000 0.00 0.00 36.30 0.86
2592 2656 1.208535 CTTGCTGTTCCGGGTGGTATA 59.791 52.381 0.00 0.00 36.30 1.47
2783 2848 0.034089 CTCCTTTCGGGGCCAAGATT 60.034 55.000 4.39 0.00 35.33 2.40
2864 2936 3.670523 CGACAGGTTAGCACGATATGATG 59.329 47.826 0.00 0.00 0.00 3.07
2917 2989 2.097142 AGACGACAGGTTAGCACGATAC 59.903 50.000 0.00 0.00 0.00 2.24
2969 3041 0.321298 AGGTGTGGCGATTTTAGCGT 60.321 50.000 0.00 0.00 35.00 5.07
2970 3042 1.647346 TAGGTGTGGCGATTTTAGCG 58.353 50.000 0.00 0.00 35.00 4.26
2971 3043 3.007635 ACTTAGGTGTGGCGATTTTAGC 58.992 45.455 0.00 0.00 0.00 3.09
2972 3044 4.693566 TCAACTTAGGTGTGGCGATTTTAG 59.306 41.667 0.00 0.00 0.00 1.85
2973 3045 4.643463 TCAACTTAGGTGTGGCGATTTTA 58.357 39.130 0.00 0.00 0.00 1.52
2974 3046 3.482436 TCAACTTAGGTGTGGCGATTTT 58.518 40.909 0.00 0.00 0.00 1.82
2975 3047 3.074412 CTCAACTTAGGTGTGGCGATTT 58.926 45.455 0.00 0.00 0.00 2.17
2976 3048 2.615493 CCTCAACTTAGGTGTGGCGATT 60.615 50.000 5.38 0.00 31.46 3.34
2977 3049 1.066143 CCTCAACTTAGGTGTGGCGAT 60.066 52.381 5.38 0.00 31.46 4.58
2978 3050 0.320374 CCTCAACTTAGGTGTGGCGA 59.680 55.000 5.38 0.00 31.46 5.54
2979 3051 2.840974 CCTCAACTTAGGTGTGGCG 58.159 57.895 5.38 0.00 31.46 5.69
2986 3058 3.335579 GTGGCTAACACCTCAACTTAGG 58.664 50.000 0.00 0.00 44.49 2.69
3013 3085 3.872603 ACTTCCTGTGGCGTGCCA 61.873 61.111 10.06 10.06 45.02 4.92
3014 3086 3.357079 CACTTCCTGTGGCGTGCC 61.357 66.667 3.30 3.30 42.68 5.01
3022 3094 4.643387 GCCCGCCACACTTCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
3023 3095 4.641645 TGCCCGCCACACTTCCTG 62.642 66.667 0.00 0.00 0.00 3.86
3024 3096 2.920076 TTTTGCCCGCCACACTTCCT 62.920 55.000 0.00 0.00 0.00 3.36
3025 3097 1.815817 ATTTTGCCCGCCACACTTCC 61.816 55.000 0.00 0.00 0.00 3.46
3026 3098 0.667184 CATTTTGCCCGCCACACTTC 60.667 55.000 0.00 0.00 0.00 3.01
3027 3099 1.367102 CATTTTGCCCGCCACACTT 59.633 52.632 0.00 0.00 0.00 3.16
3028 3100 2.573083 CCATTTTGCCCGCCACACT 61.573 57.895 0.00 0.00 0.00 3.55
3029 3101 2.048316 CCATTTTGCCCGCCACAC 60.048 61.111 0.00 0.00 0.00 3.82
3030 3102 3.309506 CCCATTTTGCCCGCCACA 61.310 61.111 0.00 0.00 0.00 4.17
3031 3103 4.758251 GCCCATTTTGCCCGCCAC 62.758 66.667 0.00 0.00 0.00 5.01
3038 3110 0.104671 ATATGTGGCGCCCATTTTGC 59.895 50.000 27.94 10.51 35.28 3.68
3039 3111 1.682854 AGATATGTGGCGCCCATTTTG 59.317 47.619 27.94 0.00 35.28 2.44
3040 3112 2.071778 AGATATGTGGCGCCCATTTT 57.928 45.000 27.94 18.79 35.28 1.82
3041 3113 1.682854 CAAGATATGTGGCGCCCATTT 59.317 47.619 27.94 22.15 35.28 2.32
3042 3114 1.133823 TCAAGATATGTGGCGCCCATT 60.134 47.619 27.94 18.35 35.28 3.16
3043 3115 0.473755 TCAAGATATGTGGCGCCCAT 59.526 50.000 26.77 26.66 35.28 4.00
3044 3116 0.179048 CTCAAGATATGTGGCGCCCA 60.179 55.000 26.77 21.79 0.00 5.36
3045 3117 0.106708 TCTCAAGATATGTGGCGCCC 59.893 55.000 26.77 16.24 0.00 6.13
3046 3118 1.953559 TTCTCAAGATATGTGGCGCC 58.046 50.000 22.73 22.73 0.00 6.53
3047 3119 3.397482 AGATTCTCAAGATATGTGGCGC 58.603 45.455 0.00 0.00 0.00 6.53
3048 3120 4.685165 CAGAGATTCTCAAGATATGTGGCG 59.315 45.833 15.83 0.00 32.06 5.69
3049 3121 4.451774 GCAGAGATTCTCAAGATATGTGGC 59.548 45.833 15.83 0.79 32.06 5.01
3050 3122 5.697178 CAGCAGAGATTCTCAAGATATGTGG 59.303 44.000 15.83 0.00 32.06 4.17
3051 3123 5.177881 GCAGCAGAGATTCTCAAGATATGTG 59.822 44.000 15.83 4.05 32.06 3.21
3052 3124 5.163332 TGCAGCAGAGATTCTCAAGATATGT 60.163 40.000 15.83 0.00 32.06 2.29
3053 3125 5.298347 TGCAGCAGAGATTCTCAAGATATG 58.702 41.667 15.83 5.38 32.06 1.78
3054 3126 5.304871 TCTGCAGCAGAGATTCTCAAGATAT 59.695 40.000 21.85 0.00 35.39 1.63
3055 3127 4.648307 TCTGCAGCAGAGATTCTCAAGATA 59.352 41.667 21.85 0.00 35.39 1.98
3056 3128 3.451540 TCTGCAGCAGAGATTCTCAAGAT 59.548 43.478 21.85 3.99 35.39 2.40
3057 3129 2.830321 TCTGCAGCAGAGATTCTCAAGA 59.170 45.455 21.85 5.96 35.39 3.02
3058 3130 3.248495 TCTGCAGCAGAGATTCTCAAG 57.752 47.619 21.85 8.78 35.39 3.02
3059 3131 3.597255 CTTCTGCAGCAGAGATTCTCAA 58.403 45.455 24.15 7.07 41.75 3.02
3060 3132 3.248495 CTTCTGCAGCAGAGATTCTCA 57.752 47.619 24.15 7.80 41.75 3.27
3072 3144 0.240411 GTGCAAAGGAGCTTCTGCAG 59.760 55.000 9.12 7.63 44.93 4.41
3073 3145 0.179009 AGTGCAAAGGAGCTTCTGCA 60.179 50.000 4.84 4.84 42.28 4.41
3074 3146 0.240411 CAGTGCAAAGGAGCTTCTGC 59.760 55.000 0.00 0.00 40.05 4.26
3075 3147 1.266175 CACAGTGCAAAGGAGCTTCTG 59.734 52.381 0.00 0.00 40.28 3.02
3076 3148 1.602311 CACAGTGCAAAGGAGCTTCT 58.398 50.000 0.00 0.00 34.99 2.85
3077 3149 0.595095 CCACAGTGCAAAGGAGCTTC 59.405 55.000 0.00 0.00 34.99 3.86
3078 3150 1.458639 GCCACAGTGCAAAGGAGCTT 61.459 55.000 0.00 0.00 34.99 3.74
3079 3151 1.900498 GCCACAGTGCAAAGGAGCT 60.900 57.895 0.00 0.00 34.99 4.09
3080 3152 2.647297 GCCACAGTGCAAAGGAGC 59.353 61.111 0.00 0.00 0.00 4.70
3081 3153 1.572085 CTCGCCACAGTGCAAAGGAG 61.572 60.000 0.00 0.00 0.00 3.69
3082 3154 1.597854 CTCGCCACAGTGCAAAGGA 60.598 57.895 0.00 0.00 0.00 3.36
3083 3155 2.949106 CTCGCCACAGTGCAAAGG 59.051 61.111 0.00 0.00 0.00 3.11
3084 3156 2.253452 GCTCGCCACAGTGCAAAG 59.747 61.111 0.00 0.00 0.00 2.77
3085 3157 3.286751 GGCTCGCCACAGTGCAAA 61.287 61.111 2.41 0.00 35.81 3.68
3086 3158 4.560743 TGGCTCGCCACAGTGCAA 62.561 61.111 6.52 0.00 41.89 4.08
3094 3166 2.476852 TATGCAGGTTTGGCTCGCCA 62.477 55.000 6.52 6.52 45.63 5.69
3095 3167 1.748879 TATGCAGGTTTGGCTCGCC 60.749 57.895 0.00 0.00 0.00 5.54
3096 3168 1.305219 TGTATGCAGGTTTGGCTCGC 61.305 55.000 0.00 0.00 0.00 5.03
3097 3169 0.729116 CTGTATGCAGGTTTGGCTCG 59.271 55.000 2.35 0.00 39.01 5.03
3098 3170 0.453390 GCTGTATGCAGGTTTGGCTC 59.547 55.000 13.03 0.00 42.78 4.70
3099 3171 2.571548 GCTGTATGCAGGTTTGGCT 58.428 52.632 13.03 0.00 42.78 4.75
3109 3181 1.068333 CAGGTGTTTGGTGCTGTATGC 60.068 52.381 0.00 0.00 43.25 3.14
3110 3182 1.068333 GCAGGTGTTTGGTGCTGTATG 60.068 52.381 0.00 0.00 34.23 2.39
3111 3183 1.247567 GCAGGTGTTTGGTGCTGTAT 58.752 50.000 0.00 0.00 34.23 2.29
3112 3184 0.821711 GGCAGGTGTTTGGTGCTGTA 60.822 55.000 0.00 0.00 37.37 2.74
3113 3185 2.127232 GGCAGGTGTTTGGTGCTGT 61.127 57.895 0.00 0.00 37.37 4.40
3114 3186 0.537143 TAGGCAGGTGTTTGGTGCTG 60.537 55.000 0.00 0.00 37.37 4.41
3115 3187 0.184933 TTAGGCAGGTGTTTGGTGCT 59.815 50.000 0.00 0.00 37.37 4.40
3116 3188 0.598065 CTTAGGCAGGTGTTTGGTGC 59.402 55.000 0.00 0.00 36.42 5.01
3117 3189 1.202879 TCCTTAGGCAGGTGTTTGGTG 60.203 52.381 0.00 0.00 44.37 4.17
3118 3190 1.073923 CTCCTTAGGCAGGTGTTTGGT 59.926 52.381 0.00 0.00 44.37 3.67
3119 3191 1.614317 CCTCCTTAGGCAGGTGTTTGG 60.614 57.143 8.11 0.00 44.37 3.28
3120 3192 1.826385 CCTCCTTAGGCAGGTGTTTG 58.174 55.000 8.11 0.00 44.37 2.93
3131 3203 0.899720 TTACGGGCACACCTCCTTAG 59.100 55.000 0.00 0.00 36.97 2.18
3132 3204 0.609662 GTTACGGGCACACCTCCTTA 59.390 55.000 0.00 0.00 36.97 2.69
3133 3205 1.373812 GTTACGGGCACACCTCCTT 59.626 57.895 0.00 0.00 36.97 3.36
3134 3206 1.827399 CTGTTACGGGCACACCTCCT 61.827 60.000 0.00 0.00 36.97 3.69
3135 3207 1.375523 CTGTTACGGGCACACCTCC 60.376 63.158 0.00 0.00 36.97 4.30
3136 3208 2.033194 GCTGTTACGGGCACACCTC 61.033 63.158 0.00 0.00 36.97 3.85
3137 3209 2.032071 GCTGTTACGGGCACACCT 59.968 61.111 0.00 0.00 36.97 4.00
3138 3210 1.170290 AAAGCTGTTACGGGCACACC 61.170 55.000 0.00 0.00 0.00 4.16
3139 3211 0.040425 CAAAGCTGTTACGGGCACAC 60.040 55.000 0.00 0.00 0.00 3.82
3140 3212 1.169661 CCAAAGCTGTTACGGGCACA 61.170 55.000 0.00 0.00 0.00 4.57
3141 3213 1.579429 CCAAAGCTGTTACGGGCAC 59.421 57.895 0.00 0.00 0.00 5.01
3142 3214 2.265182 GCCAAAGCTGTTACGGGCA 61.265 57.895 0.00 0.00 41.02 5.36
3143 3215 2.566529 GCCAAAGCTGTTACGGGC 59.433 61.111 0.00 0.00 35.50 6.13
3144 3216 1.964373 ACGCCAAAGCTGTTACGGG 60.964 57.895 0.00 0.00 36.60 5.28
3145 3217 1.206578 CACGCCAAAGCTGTTACGG 59.793 57.895 0.00 0.00 36.60 4.02
3146 3218 1.206578 CCACGCCAAAGCTGTTACG 59.793 57.895 0.00 0.00 36.60 3.18
3147 3219 1.081442 GCCACGCCAAAGCTGTTAC 60.081 57.895 0.00 0.00 36.60 2.50
3148 3220 1.103987 TTGCCACGCCAAAGCTGTTA 61.104 50.000 0.00 0.00 36.60 2.41
3149 3221 1.747325 ATTGCCACGCCAAAGCTGTT 61.747 50.000 0.00 0.00 36.60 3.16
3150 3222 2.146073 GATTGCCACGCCAAAGCTGT 62.146 55.000 0.00 0.00 36.60 4.40
3151 3223 1.444895 GATTGCCACGCCAAAGCTG 60.445 57.895 0.00 0.00 36.60 4.24
3152 3224 0.322456 TAGATTGCCACGCCAAAGCT 60.322 50.000 0.00 0.00 36.60 3.74
3153 3225 0.740737 ATAGATTGCCACGCCAAAGC 59.259 50.000 0.00 0.00 0.00 3.51
3154 3226 2.016318 TCATAGATTGCCACGCCAAAG 58.984 47.619 0.00 0.00 0.00 2.77
3155 3227 1.742831 GTCATAGATTGCCACGCCAAA 59.257 47.619 0.00 0.00 0.00 3.28
3156 3228 1.065491 AGTCATAGATTGCCACGCCAA 60.065 47.619 0.00 0.00 0.00 4.52
3157 3229 0.541392 AGTCATAGATTGCCACGCCA 59.459 50.000 0.00 0.00 0.00 5.69
3158 3230 0.940126 CAGTCATAGATTGCCACGCC 59.060 55.000 0.00 0.00 0.00 5.68
3159 3231 0.940126 CCAGTCATAGATTGCCACGC 59.060 55.000 0.00 0.00 0.00 5.34
3160 3232 1.138859 TCCCAGTCATAGATTGCCACG 59.861 52.381 0.00 0.00 0.00 4.94
3161 3233 2.945668 GTTCCCAGTCATAGATTGCCAC 59.054 50.000 0.00 0.00 0.00 5.01
3162 3234 2.092429 GGTTCCCAGTCATAGATTGCCA 60.092 50.000 0.00 0.00 0.00 4.92
3163 3235 2.092429 TGGTTCCCAGTCATAGATTGCC 60.092 50.000 0.00 0.00 0.00 4.52
3164 3236 3.281727 TGGTTCCCAGTCATAGATTGC 57.718 47.619 0.00 0.00 0.00 3.56
3165 3237 6.016777 GCTATTTGGTTCCCAGTCATAGATTG 60.017 42.308 9.00 0.00 33.81 2.67
3166 3238 6.064717 GCTATTTGGTTCCCAGTCATAGATT 58.935 40.000 9.00 0.00 33.81 2.40
3167 3239 5.456763 GGCTATTTGGTTCCCAGTCATAGAT 60.457 44.000 9.00 0.00 33.81 1.98
3168 3240 4.141482 GGCTATTTGGTTCCCAGTCATAGA 60.141 45.833 9.00 0.00 33.81 1.98
3169 3241 4.137543 GGCTATTTGGTTCCCAGTCATAG 58.862 47.826 0.00 0.00 33.81 2.23
3170 3242 3.117663 GGGCTATTTGGTTCCCAGTCATA 60.118 47.826 0.00 0.00 38.62 2.15
3171 3243 2.358195 GGGCTATTTGGTTCCCAGTCAT 60.358 50.000 0.00 0.00 38.62 3.06
3172 3244 1.005450 GGGCTATTTGGTTCCCAGTCA 59.995 52.381 0.00 0.00 38.62 3.41
3173 3245 1.685180 GGGGCTATTTGGTTCCCAGTC 60.685 57.143 0.00 0.00 40.53 3.51
3174 3246 0.335019 GGGGCTATTTGGTTCCCAGT 59.665 55.000 0.00 0.00 40.53 4.00
3175 3247 0.751643 CGGGGCTATTTGGTTCCCAG 60.752 60.000 0.00 0.00 40.53 4.45
3176 3248 1.304952 CGGGGCTATTTGGTTCCCA 59.695 57.895 0.00 0.00 40.53 4.37
3177 3249 0.547553 TACGGGGCTATTTGGTTCCC 59.452 55.000 0.00 0.00 38.03 3.97
3178 3250 1.211212 ACTACGGGGCTATTTGGTTCC 59.789 52.381 0.00 0.00 0.00 3.62
3179 3251 2.704464 ACTACGGGGCTATTTGGTTC 57.296 50.000 0.00 0.00 0.00 3.62
3180 3252 4.225717 TCTTAACTACGGGGCTATTTGGTT 59.774 41.667 0.00 0.00 0.00 3.67
3181 3253 3.776417 TCTTAACTACGGGGCTATTTGGT 59.224 43.478 0.00 0.00 0.00 3.67
3182 3254 4.411256 TCTTAACTACGGGGCTATTTGG 57.589 45.455 0.00 0.00 0.00 3.28
3183 3255 7.383687 TGATATCTTAACTACGGGGCTATTTG 58.616 38.462 3.98 0.00 0.00 2.32
3184 3256 7.549147 TGATATCTTAACTACGGGGCTATTT 57.451 36.000 3.98 0.00 0.00 1.40
3185 3257 7.620094 AGATGATATCTTAACTACGGGGCTATT 59.380 37.037 3.98 0.00 35.76 1.73
3186 3258 7.068839 CAGATGATATCTTAACTACGGGGCTAT 59.931 40.741 3.98 0.00 37.58 2.97
3187 3259 6.377429 CAGATGATATCTTAACTACGGGGCTA 59.623 42.308 3.98 0.00 37.58 3.93
3188 3260 5.186021 CAGATGATATCTTAACTACGGGGCT 59.814 44.000 3.98 0.00 37.58 5.19
3189 3261 5.185249 TCAGATGATATCTTAACTACGGGGC 59.815 44.000 3.98 0.00 37.58 5.80
3190 3262 6.835819 TCAGATGATATCTTAACTACGGGG 57.164 41.667 3.98 0.00 37.58 5.73
3200 3272 8.976353 AGCCGTTCTATTATCAGATGATATCTT 58.024 33.333 3.98 0.00 37.58 2.40
3201 3273 8.412456 CAGCCGTTCTATTATCAGATGATATCT 58.588 37.037 3.98 0.00 41.15 1.98
3202 3274 7.651304 CCAGCCGTTCTATTATCAGATGATATC 59.349 40.741 3.47 0.00 36.94 1.63
3203 3275 7.418368 CCCAGCCGTTCTATTATCAGATGATAT 60.418 40.741 3.47 0.00 36.94 1.63
3204 3276 6.127338 CCCAGCCGTTCTATTATCAGATGATA 60.127 42.308 0.00 0.00 36.05 2.15
3205 3277 5.337894 CCCAGCCGTTCTATTATCAGATGAT 60.338 44.000 0.31 0.31 38.51 2.45
3206 3278 4.021104 CCCAGCCGTTCTATTATCAGATGA 60.021 45.833 0.00 0.00 0.00 2.92
3207 3279 4.248859 CCCAGCCGTTCTATTATCAGATG 58.751 47.826 0.00 0.00 0.00 2.90
3208 3280 3.904339 ACCCAGCCGTTCTATTATCAGAT 59.096 43.478 0.00 0.00 0.00 2.90
3209 3281 3.305720 ACCCAGCCGTTCTATTATCAGA 58.694 45.455 0.00 0.00 0.00 3.27
3210 3282 3.654414 GACCCAGCCGTTCTATTATCAG 58.346 50.000 0.00 0.00 0.00 2.90
3211 3283 2.035449 CGACCCAGCCGTTCTATTATCA 59.965 50.000 0.00 0.00 0.00 2.15
3212 3284 2.035576 ACGACCCAGCCGTTCTATTATC 59.964 50.000 0.00 0.00 36.83 1.75
3213 3285 2.037144 ACGACCCAGCCGTTCTATTAT 58.963 47.619 0.00 0.00 36.83 1.28
3214 3286 1.477553 ACGACCCAGCCGTTCTATTA 58.522 50.000 0.00 0.00 36.83 0.98
3215 3287 0.611714 AACGACCCAGCCGTTCTATT 59.388 50.000 0.00 0.00 45.74 1.73
3216 3288 0.108329 CAACGACCCAGCCGTTCTAT 60.108 55.000 0.00 0.00 46.85 1.98
3217 3289 1.290955 CAACGACCCAGCCGTTCTA 59.709 57.895 0.00 0.00 46.85 2.10
3218 3290 2.030562 CAACGACCCAGCCGTTCT 59.969 61.111 0.00 0.00 46.85 3.01
3219 3291 1.890510 AACAACGACCCAGCCGTTC 60.891 57.895 0.00 0.00 46.85 3.95
3221 3293 2.590575 CAACAACGACCCAGCCGT 60.591 61.111 0.00 0.00 42.61 5.68
3222 3294 2.184167 AACAACAACGACCCAGCCG 61.184 57.895 0.00 0.00 0.00 5.52
3223 3295 1.358759 CAACAACAACGACCCAGCC 59.641 57.895 0.00 0.00 0.00 4.85
3224 3296 0.454196 AACAACAACAACGACCCAGC 59.546 50.000 0.00 0.00 0.00 4.85
3225 3297 1.740585 TCAACAACAACAACGACCCAG 59.259 47.619 0.00 0.00 0.00 4.45
3226 3298 1.740585 CTCAACAACAACAACGACCCA 59.259 47.619 0.00 0.00 0.00 4.51
3227 3299 2.011222 TCTCAACAACAACAACGACCC 58.989 47.619 0.00 0.00 0.00 4.46
3228 3300 3.963383 ATCTCAACAACAACAACGACC 57.037 42.857 0.00 0.00 0.00 4.79
3229 3301 5.328691 TGAAATCTCAACAACAACAACGAC 58.671 37.500 0.00 0.00 0.00 4.34
3230 3302 5.553290 TGAAATCTCAACAACAACAACGA 57.447 34.783 0.00 0.00 0.00 3.85
3231 3303 6.810888 AATGAAATCTCAACAACAACAACG 57.189 33.333 0.00 0.00 34.49 4.10
3251 3323 9.323963 GCCGAACCAAATAACAAATTTTTAATG 57.676 29.630 0.00 0.00 0.00 1.90
3252 3324 9.057089 TGCCGAACCAAATAACAAATTTTTAAT 57.943 25.926 0.00 0.00 0.00 1.40
3253 3325 8.336080 GTGCCGAACCAAATAACAAATTTTTAA 58.664 29.630 0.00 0.00 0.00 1.52
3254 3326 7.494625 TGTGCCGAACCAAATAACAAATTTTTA 59.505 29.630 0.00 0.00 0.00 1.52
3255 3327 6.316390 TGTGCCGAACCAAATAACAAATTTTT 59.684 30.769 0.00 0.00 0.00 1.94
3256 3328 5.817816 TGTGCCGAACCAAATAACAAATTTT 59.182 32.000 0.00 0.00 0.00 1.82
3257 3329 5.360591 TGTGCCGAACCAAATAACAAATTT 58.639 33.333 0.00 0.00 0.00 1.82
3258 3330 4.950050 TGTGCCGAACCAAATAACAAATT 58.050 34.783 0.00 0.00 0.00 1.82
3259 3331 4.038642 ACTGTGCCGAACCAAATAACAAAT 59.961 37.500 0.00 0.00 0.00 2.32
3260 3332 3.381908 ACTGTGCCGAACCAAATAACAAA 59.618 39.130 0.00 0.00 0.00 2.83
3261 3333 2.952978 ACTGTGCCGAACCAAATAACAA 59.047 40.909 0.00 0.00 0.00 2.83
3262 3334 2.292016 CACTGTGCCGAACCAAATAACA 59.708 45.455 0.00 0.00 0.00 2.41
3263 3335 2.550606 TCACTGTGCCGAACCAAATAAC 59.449 45.455 2.12 0.00 0.00 1.89
3264 3336 2.811431 CTCACTGTGCCGAACCAAATAA 59.189 45.455 2.12 0.00 0.00 1.40
3265 3337 2.037902 TCTCACTGTGCCGAACCAAATA 59.962 45.455 2.12 0.00 0.00 1.40
3266 3338 1.202758 TCTCACTGTGCCGAACCAAAT 60.203 47.619 2.12 0.00 0.00 2.32
3267 3339 0.179234 TCTCACTGTGCCGAACCAAA 59.821 50.000 2.12 0.00 0.00 3.28
3268 3340 0.179234 TTCTCACTGTGCCGAACCAA 59.821 50.000 2.12 0.00 0.00 3.67
3269 3341 0.249868 CTTCTCACTGTGCCGAACCA 60.250 55.000 2.12 0.00 0.00 3.67
3270 3342 0.033504 TCTTCTCACTGTGCCGAACC 59.966 55.000 2.12 0.00 0.00 3.62
3271 3343 1.728971 CATCTTCTCACTGTGCCGAAC 59.271 52.381 2.12 0.00 0.00 3.95
3272 3344 1.338105 CCATCTTCTCACTGTGCCGAA 60.338 52.381 2.12 7.44 0.00 4.30
3273 3345 0.247460 CCATCTTCTCACTGTGCCGA 59.753 55.000 2.12 0.00 0.00 5.54
3274 3346 0.036952 ACCATCTTCTCACTGTGCCG 60.037 55.000 2.12 0.00 0.00 5.69
3275 3347 3.201290 CATACCATCTTCTCACTGTGCC 58.799 50.000 2.12 0.00 0.00 5.01
3276 3348 2.611292 GCATACCATCTTCTCACTGTGC 59.389 50.000 2.12 0.00 0.00 4.57
3277 3349 2.862536 CGCATACCATCTTCTCACTGTG 59.137 50.000 0.17 0.17 0.00 3.66
3278 3350 2.497675 ACGCATACCATCTTCTCACTGT 59.502 45.455 0.00 0.00 0.00 3.55
3279 3351 3.170791 ACGCATACCATCTTCTCACTG 57.829 47.619 0.00 0.00 0.00 3.66
3280 3352 3.895232 AACGCATACCATCTTCTCACT 57.105 42.857 0.00 0.00 0.00 3.41
3281 3353 4.946784 AAAACGCATACCATCTTCTCAC 57.053 40.909 0.00 0.00 0.00 3.51
3282 3354 7.624360 AAATAAAACGCATACCATCTTCTCA 57.376 32.000 0.00 0.00 0.00 3.27
3283 3355 8.911247 AAAAATAAAACGCATACCATCTTCTC 57.089 30.769 0.00 0.00 0.00 2.87
3303 3375 9.072375 CCACCAAACCAAACCAATAATAAAAAT 57.928 29.630 0.00 0.00 0.00 1.82
3304 3376 7.502561 CCCACCAAACCAAACCAATAATAAAAA 59.497 33.333 0.00 0.00 0.00 1.94
3305 3377 6.998673 CCCACCAAACCAAACCAATAATAAAA 59.001 34.615 0.00 0.00 0.00 1.52
3306 3378 6.101296 ACCCACCAAACCAAACCAATAATAAA 59.899 34.615 0.00 0.00 0.00 1.40
3307 3379 5.607171 ACCCACCAAACCAAACCAATAATAA 59.393 36.000 0.00 0.00 0.00 1.40
3308 3380 5.012148 CACCCACCAAACCAAACCAATAATA 59.988 40.000 0.00 0.00 0.00 0.98
3309 3381 3.977326 ACCCACCAAACCAAACCAATAAT 59.023 39.130 0.00 0.00 0.00 1.28
3310 3382 3.134804 CACCCACCAAACCAAACCAATAA 59.865 43.478 0.00 0.00 0.00 1.40
3311 3383 2.700897 CACCCACCAAACCAAACCAATA 59.299 45.455 0.00 0.00 0.00 1.90
3312 3384 1.488393 CACCCACCAAACCAAACCAAT 59.512 47.619 0.00 0.00 0.00 3.16
3313 3385 0.905357 CACCCACCAAACCAAACCAA 59.095 50.000 0.00 0.00 0.00 3.67
3314 3386 0.041238 TCACCCACCAAACCAAACCA 59.959 50.000 0.00 0.00 0.00 3.67
3315 3387 1.196012 TTCACCCACCAAACCAAACC 58.804 50.000 0.00 0.00 0.00 3.27
3316 3388 3.336138 TTTTCACCCACCAAACCAAAC 57.664 42.857 0.00 0.00 0.00 2.93
3317 3389 3.583086 TCTTTTTCACCCACCAAACCAAA 59.417 39.130 0.00 0.00 0.00 3.28
3318 3390 3.173965 TCTTTTTCACCCACCAAACCAA 58.826 40.909 0.00 0.00 0.00 3.67
3319 3391 2.821437 TCTTTTTCACCCACCAAACCA 58.179 42.857 0.00 0.00 0.00 3.67
3320 3392 3.386402 TCATCTTTTTCACCCACCAAACC 59.614 43.478 0.00 0.00 0.00 3.27
3321 3393 4.664150 TCATCTTTTTCACCCACCAAAC 57.336 40.909 0.00 0.00 0.00 2.93
3322 3394 4.653341 ACATCATCTTTTTCACCCACCAAA 59.347 37.500 0.00 0.00 0.00 3.28
3323 3395 4.039004 CACATCATCTTTTTCACCCACCAA 59.961 41.667 0.00 0.00 0.00 3.67
3324 3396 3.573538 CACATCATCTTTTTCACCCACCA 59.426 43.478 0.00 0.00 0.00 4.17
3325 3397 3.573967 ACACATCATCTTTTTCACCCACC 59.426 43.478 0.00 0.00 0.00 4.61
3326 3398 4.037923 ACACACATCATCTTTTTCACCCAC 59.962 41.667 0.00 0.00 0.00 4.61
3327 3399 4.214310 ACACACATCATCTTTTTCACCCA 58.786 39.130 0.00 0.00 0.00 4.51
3328 3400 4.853924 ACACACATCATCTTTTTCACCC 57.146 40.909 0.00 0.00 0.00 4.61
3329 3401 8.816640 ATAAAACACACATCATCTTTTTCACC 57.183 30.769 0.00 0.00 0.00 4.02
3353 3425 9.891828 CAACACACCGCATTATATATACAAAAT 57.108 29.630 0.00 0.00 0.00 1.82
3354 3426 8.894731 ACAACACACCGCATTATATATACAAAA 58.105 29.630 0.00 0.00 0.00 2.44
3355 3427 8.439993 ACAACACACCGCATTATATATACAAA 57.560 30.769 0.00 0.00 0.00 2.83
3356 3428 8.338986 CAACAACACACCGCATTATATATACAA 58.661 33.333 0.00 0.00 0.00 2.41
3357 3429 7.041712 CCAACAACACACCGCATTATATATACA 60.042 37.037 0.00 0.00 0.00 2.29
3358 3430 7.295201 CCAACAACACACCGCATTATATATAC 58.705 38.462 0.00 0.00 0.00 1.47
3359 3431 6.428465 CCCAACAACACACCGCATTATATATA 59.572 38.462 0.00 0.00 0.00 0.86
3360 3432 5.240623 CCCAACAACACACCGCATTATATAT 59.759 40.000 0.00 0.00 0.00 0.86
3361 3433 4.576873 CCCAACAACACACCGCATTATATA 59.423 41.667 0.00 0.00 0.00 0.86
3362 3434 3.380004 CCCAACAACACACCGCATTATAT 59.620 43.478 0.00 0.00 0.00 0.86
3363 3435 2.750166 CCCAACAACACACCGCATTATA 59.250 45.455 0.00 0.00 0.00 0.98
3364 3436 1.543802 CCCAACAACACACCGCATTAT 59.456 47.619 0.00 0.00 0.00 1.28
3365 3437 0.955178 CCCAACAACACACCGCATTA 59.045 50.000 0.00 0.00 0.00 1.90
3366 3438 1.739049 CCCAACAACACACCGCATT 59.261 52.632 0.00 0.00 0.00 3.56
3367 3439 2.855514 GCCCAACAACACACCGCAT 61.856 57.895 0.00 0.00 0.00 4.73
3368 3440 3.522731 GCCCAACAACACACCGCA 61.523 61.111 0.00 0.00 0.00 5.69
3369 3441 2.291457 AAAGCCCAACAACACACCGC 62.291 55.000 0.00 0.00 0.00 5.68
3370 3442 0.174617 AAAAGCCCAACAACACACCG 59.825 50.000 0.00 0.00 0.00 4.94
3371 3443 2.006169 CAAAAAGCCCAACAACACACC 58.994 47.619 0.00 0.00 0.00 4.16
3372 3444 2.006169 CCAAAAAGCCCAACAACACAC 58.994 47.619 0.00 0.00 0.00 3.82
3373 3445 1.677217 GCCAAAAAGCCCAACAACACA 60.677 47.619 0.00 0.00 0.00 3.72
3374 3446 1.013596 GCCAAAAAGCCCAACAACAC 58.986 50.000 0.00 0.00 0.00 3.32
3375 3447 0.615331 TGCCAAAAAGCCCAACAACA 59.385 45.000 0.00 0.00 0.00 3.33
3376 3448 1.298602 CTGCCAAAAAGCCCAACAAC 58.701 50.000 0.00 0.00 0.00 3.32
3377 3449 0.908198 ACTGCCAAAAAGCCCAACAA 59.092 45.000 0.00 0.00 0.00 2.83
3378 3450 0.177604 CACTGCCAAAAAGCCCAACA 59.822 50.000 0.00 0.00 0.00 3.33
3379 3451 0.177836 ACACTGCCAAAAAGCCCAAC 59.822 50.000 0.00 0.00 0.00 3.77
3380 3452 1.781786 TACACTGCCAAAAAGCCCAA 58.218 45.000 0.00 0.00 0.00 4.12
3381 3453 1.781786 TTACACTGCCAAAAAGCCCA 58.218 45.000 0.00 0.00 0.00 5.36
3382 3454 3.401033 AATTACACTGCCAAAAAGCCC 57.599 42.857 0.00 0.00 0.00 5.19
3383 3455 4.574421 ACAAAATTACACTGCCAAAAAGCC 59.426 37.500 0.00 0.00 0.00 4.35
3384 3456 5.064579 ACACAAAATTACACTGCCAAAAAGC 59.935 36.000 0.00 0.00 0.00 3.51
3385 3457 6.660887 ACACAAAATTACACTGCCAAAAAG 57.339 33.333 0.00 0.00 0.00 2.27
3386 3458 8.723942 ATAACACAAAATTACACTGCCAAAAA 57.276 26.923 0.00 0.00 0.00 1.94
3387 3459 8.200792 AGATAACACAAAATTACACTGCCAAAA 58.799 29.630 0.00 0.00 0.00 2.44
3388 3460 7.721402 AGATAACACAAAATTACACTGCCAAA 58.279 30.769 0.00 0.00 0.00 3.28
3389 3461 7.283625 AGATAACACAAAATTACACTGCCAA 57.716 32.000 0.00 0.00 0.00 4.52
3390 3462 6.892658 AGATAACACAAAATTACACTGCCA 57.107 33.333 0.00 0.00 0.00 4.92
3391 3463 8.040716 AGTAGATAACACAAAATTACACTGCC 57.959 34.615 0.00 0.00 0.00 4.85
3392 3464 9.968743 GTAGTAGATAACACAAAATTACACTGC 57.031 33.333 0.00 0.00 0.00 4.40
3396 3468 9.880157 GGGAGTAGTAGATAACACAAAATTACA 57.120 33.333 0.00 0.00 0.00 2.41
3399 3471 8.265764 GGAGGGAGTAGTAGATAACACAAAATT 58.734 37.037 0.00 0.00 0.00 1.82
3400 3472 7.417570 CGGAGGGAGTAGTAGATAACACAAAAT 60.418 40.741 0.00 0.00 0.00 1.82
3401 3473 6.127535 CGGAGGGAGTAGTAGATAACACAAAA 60.128 42.308 0.00 0.00 0.00 2.44
3402 3474 5.359009 CGGAGGGAGTAGTAGATAACACAAA 59.641 44.000 0.00 0.00 0.00 2.83
3403 3475 4.885907 CGGAGGGAGTAGTAGATAACACAA 59.114 45.833 0.00 0.00 0.00 3.33
3404 3476 4.080129 ACGGAGGGAGTAGTAGATAACACA 60.080 45.833 0.00 0.00 0.00 3.72
3405 3477 4.459330 ACGGAGGGAGTAGTAGATAACAC 58.541 47.826 0.00 0.00 0.00 3.32
3406 3478 4.445448 GGACGGAGGGAGTAGTAGATAACA 60.445 50.000 0.00 0.00 0.00 2.41
3407 3479 4.071423 GGACGGAGGGAGTAGTAGATAAC 58.929 52.174 0.00 0.00 0.00 1.89
3408 3480 3.073650 GGGACGGAGGGAGTAGTAGATAA 59.926 52.174 0.00 0.00 0.00 1.75
3409 3481 2.641815 GGGACGGAGGGAGTAGTAGATA 59.358 54.545 0.00 0.00 0.00 1.98
3410 3482 1.424684 GGGACGGAGGGAGTAGTAGAT 59.575 57.143 0.00 0.00 0.00 1.98
3411 3483 0.842635 GGGACGGAGGGAGTAGTAGA 59.157 60.000 0.00 0.00 0.00 2.59
3412 3484 0.549950 TGGGACGGAGGGAGTAGTAG 59.450 60.000 0.00 0.00 0.00 2.57
3413 3485 1.229131 ATGGGACGGAGGGAGTAGTA 58.771 55.000 0.00 0.00 0.00 1.82
3414 3486 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
3415 3487 2.376695 TTATGGGACGGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
3416 3488 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3417 3489 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3418 3490 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3419 3491 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
3420 3492 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
3421 3493 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
3422 3494 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
3423 3495 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
3424 3496 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
3425 3497 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
3458 3530 8.316214 CCACATAAGTACTCCCTAGTGTAAAAA 58.684 37.037 0.00 0.00 36.36 1.94
3459 3531 7.093201 CCCACATAAGTACTCCCTAGTGTAAAA 60.093 40.741 0.00 0.00 36.36 1.52
3460 3532 6.381994 CCCACATAAGTACTCCCTAGTGTAAA 59.618 42.308 0.00 0.00 36.36 2.01
3461 3533 5.895534 CCCACATAAGTACTCCCTAGTGTAA 59.104 44.000 0.00 0.00 36.36 2.41
3462 3534 5.194334 TCCCACATAAGTACTCCCTAGTGTA 59.806 44.000 0.00 0.00 36.36 2.90
3463 3535 4.016851 TCCCACATAAGTACTCCCTAGTGT 60.017 45.833 0.00 0.00 36.36 3.55
3464 3536 4.543689 TCCCACATAAGTACTCCCTAGTG 58.456 47.826 0.00 1.64 36.36 2.74
3465 3537 4.894252 TCCCACATAAGTACTCCCTAGT 57.106 45.455 0.00 0.00 39.91 2.57
3466 3538 6.749036 ATTTCCCACATAAGTACTCCCTAG 57.251 41.667 0.00 0.00 0.00 3.02
3467 3539 7.404980 AGAAATTTCCCACATAAGTACTCCCTA 59.595 37.037 14.61 0.00 0.00 3.53
3468 3540 6.217693 AGAAATTTCCCACATAAGTACTCCCT 59.782 38.462 14.61 0.00 0.00 4.20
3469 3541 6.424032 AGAAATTTCCCACATAAGTACTCCC 58.576 40.000 14.61 0.00 0.00 4.30
3470 3542 7.148069 CCAAGAAATTTCCCACATAAGTACTCC 60.148 40.741 14.61 0.00 0.00 3.85
3471 3543 7.148069 CCCAAGAAATTTCCCACATAAGTACTC 60.148 40.741 14.61 0.00 0.00 2.59
3472 3544 6.663523 CCCAAGAAATTTCCCACATAAGTACT 59.336 38.462 14.61 0.00 0.00 2.73
3473 3545 6.627287 GCCCAAGAAATTTCCCACATAAGTAC 60.627 42.308 14.61 0.00 0.00 2.73
3474 3546 5.420739 GCCCAAGAAATTTCCCACATAAGTA 59.579 40.000 14.61 0.00 0.00 2.24
3475 3547 4.222810 GCCCAAGAAATTTCCCACATAAGT 59.777 41.667 14.61 0.00 0.00 2.24
3476 3548 4.467438 AGCCCAAGAAATTTCCCACATAAG 59.533 41.667 14.61 0.00 0.00 1.73
3477 3549 4.222588 CAGCCCAAGAAATTTCCCACATAA 59.777 41.667 14.61 0.00 0.00 1.90
3478 3550 3.768757 CAGCCCAAGAAATTTCCCACATA 59.231 43.478 14.61 0.00 0.00 2.29
3479 3551 2.568509 CAGCCCAAGAAATTTCCCACAT 59.431 45.455 14.61 0.00 0.00 3.21
3480 3552 1.969923 CAGCCCAAGAAATTTCCCACA 59.030 47.619 14.61 0.00 0.00 4.17
3481 3553 1.276138 CCAGCCCAAGAAATTTCCCAC 59.724 52.381 14.61 0.92 0.00 4.61
3482 3554 1.132881 ACCAGCCCAAGAAATTTCCCA 60.133 47.619 14.61 0.00 0.00 4.37
3483 3555 1.276138 CACCAGCCCAAGAAATTTCCC 59.724 52.381 14.61 0.00 0.00 3.97
3484 3556 1.276138 CCACCAGCCCAAGAAATTTCC 59.724 52.381 14.61 0.00 0.00 3.13
3485 3557 1.338105 GCCACCAGCCCAAGAAATTTC 60.338 52.381 10.33 10.33 34.35 2.17
3486 3558 0.686789 GCCACCAGCCCAAGAAATTT 59.313 50.000 0.00 0.00 34.35 1.82
3487 3559 2.365410 GCCACCAGCCCAAGAAATT 58.635 52.632 0.00 0.00 34.35 1.82
3488 3560 4.118584 GCCACCAGCCCAAGAAAT 57.881 55.556 0.00 0.00 34.35 2.17
3497 3569 2.816087 CAACATAGATATGGCCACCAGC 59.184 50.000 8.16 0.74 36.75 4.85
3498 3570 3.181440 ACCAACATAGATATGGCCACCAG 60.181 47.826 8.16 0.00 36.75 4.00
3499 3571 2.782925 ACCAACATAGATATGGCCACCA 59.217 45.455 8.16 0.00 37.77 4.17
3500 3572 3.149196 CACCAACATAGATATGGCCACC 58.851 50.000 8.16 0.00 37.77 4.61
3501 3573 3.820557 ACACCAACATAGATATGGCCAC 58.179 45.455 8.16 0.00 37.77 5.01
3502 3574 4.518278 AACACCAACATAGATATGGCCA 57.482 40.909 8.56 8.56 37.77 5.36
3503 3575 5.373222 TGTAACACCAACATAGATATGGCC 58.627 41.667 0.00 0.00 37.77 5.36
3504 3576 6.017934 CACTGTAACACCAACATAGATATGGC 60.018 42.308 4.93 0.00 37.77 4.40
3505 3577 7.047891 ACACTGTAACACCAACATAGATATGG 58.952 38.462 4.93 0.00 38.00 2.74
3506 3578 7.763985 TGACACTGTAACACCAACATAGATATG 59.236 37.037 0.00 0.00 39.55 1.78
3507 3579 7.847096 TGACACTGTAACACCAACATAGATAT 58.153 34.615 0.00 0.00 0.00 1.63
3508 3580 7.234661 TGACACTGTAACACCAACATAGATA 57.765 36.000 0.00 0.00 0.00 1.98
3509 3581 6.109156 TGACACTGTAACACCAACATAGAT 57.891 37.500 0.00 0.00 0.00 1.98
3510 3582 5.538849 TGACACTGTAACACCAACATAGA 57.461 39.130 0.00 0.00 0.00 1.98
3511 3583 7.549134 ACATATGACACTGTAACACCAACATAG 59.451 37.037 10.38 0.00 0.00 2.23
3512 3584 7.390823 ACATATGACACTGTAACACCAACATA 58.609 34.615 10.38 0.00 0.00 2.29
3513 3585 6.237901 ACATATGACACTGTAACACCAACAT 58.762 36.000 10.38 0.00 0.00 2.71
3514 3586 5.616270 ACATATGACACTGTAACACCAACA 58.384 37.500 10.38 0.00 0.00 3.33
3515 3587 6.554334 AACATATGACACTGTAACACCAAC 57.446 37.500 10.38 0.00 0.00 3.77
3516 3588 7.672240 TCTAACATATGACACTGTAACACCAA 58.328 34.615 10.38 0.00 0.00 3.67
3517 3589 7.234661 TCTAACATATGACACTGTAACACCA 57.765 36.000 10.38 0.00 0.00 4.17
3518 3590 8.718102 AATCTAACATATGACACTGTAACACC 57.282 34.615 10.38 0.00 0.00 4.16
3545 3617 5.277297 CGCGCATTATCTCATCACCTAAAAA 60.277 40.000 8.75 0.00 0.00 1.94
3546 3618 4.211164 CGCGCATTATCTCATCACCTAAAA 59.789 41.667 8.75 0.00 0.00 1.52
3547 3619 3.740832 CGCGCATTATCTCATCACCTAAA 59.259 43.478 8.75 0.00 0.00 1.85
3548 3620 3.317150 CGCGCATTATCTCATCACCTAA 58.683 45.455 8.75 0.00 0.00 2.69
3549 3621 2.352715 CCGCGCATTATCTCATCACCTA 60.353 50.000 8.75 0.00 0.00 3.08
3550 3622 1.606480 CCGCGCATTATCTCATCACCT 60.606 52.381 8.75 0.00 0.00 4.00
3551 3623 0.792640 CCGCGCATTATCTCATCACC 59.207 55.000 8.75 0.00 0.00 4.02
3552 3624 0.792640 CCCGCGCATTATCTCATCAC 59.207 55.000 8.75 0.00 0.00 3.06
3553 3625 0.678950 TCCCGCGCATTATCTCATCA 59.321 50.000 8.75 0.00 0.00 3.07
3554 3626 1.071605 GTCCCGCGCATTATCTCATC 58.928 55.000 8.75 0.00 0.00 2.92
3555 3627 0.681733 AGTCCCGCGCATTATCTCAT 59.318 50.000 8.75 0.00 0.00 2.90
3556 3628 2.124293 AGTCCCGCGCATTATCTCA 58.876 52.632 8.75 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.