Multiple sequence alignment - TraesCS6D01G165700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G165700 chr6D 100.000 7096 0 0 2222 9317 145458364 145465459 0.000000e+00 13104.0
1 TraesCS6D01G165700 chr6D 100.000 1747 0 0 1 1747 145456143 145457889 0.000000e+00 3227.0
2 TraesCS6D01G165700 chr6D 87.405 262 32 1 5190 5450 374123979 374123718 5.470000e-77 300.0
3 TraesCS6D01G165700 chr6D 88.776 98 9 2 116 212 406112745 406112649 1.640000e-22 119.0
4 TraesCS6D01G165700 chr6D 97.872 47 1 0 5726 5772 62122873 62122919 2.160000e-11 82.4
5 TraesCS6D01G165700 chr6D 95.556 45 2 0 9215 9259 145465397 145465441 1.300000e-08 73.1
6 TraesCS6D01G165700 chr6B 97.746 2263 21 6 6226 8481 259296014 259298253 0.000000e+00 3869.0
7 TraesCS6D01G165700 chr6B 98.758 1610 16 3 4320 5928 259292154 259293760 0.000000e+00 2859.0
8 TraesCS6D01G165700 chr6B 98.443 1606 16 1 2726 4322 259290506 259292111 0.000000e+00 2819.0
9 TraesCS6D01G165700 chr6B 97.787 1220 15 1 528 1747 259287902 259289109 0.000000e+00 2093.0
10 TraesCS6D01G165700 chr6B 97.368 456 12 0 8482 8937 259298289 259298744 0.000000e+00 776.0
11 TraesCS6D01G165700 chr6B 97.020 302 9 0 2371 2672 259290049 259290350 8.350000e-140 508.0
12 TraesCS6D01G165700 chr6B 99.111 225 2 0 5923 6147 259295794 259296018 1.130000e-108 405.0
13 TraesCS6D01G165700 chr6B 93.133 233 10 3 248 474 259287672 259287904 4.170000e-88 337.0
14 TraesCS6D01G165700 chr6B 91.960 199 15 1 7737 7934 690815719 690815917 2.560000e-70 278.0
15 TraesCS6D01G165700 chr6B 99.259 135 1 0 2243 2377 259289729 259289863 2.600000e-60 244.0
16 TraesCS6D01G165700 chr6B 100.000 45 0 0 5729 5773 135867626 135867582 6.000000e-12 84.2
17 TraesCS6D01G165700 chr6B 100.000 31 0 0 8952 8982 259300148 259300118 3.630000e-04 58.4
18 TraesCS6D01G165700 chr6A 97.143 1610 33 3 2726 4322 201368661 201370270 0.000000e+00 2706.0
19 TraesCS6D01G165700 chr6A 94.737 1539 34 8 6226 7742 201372634 201374147 0.000000e+00 2350.0
20 TraesCS6D01G165700 chr6A 96.517 1407 38 4 4320 5724 201370313 201371710 0.000000e+00 2316.0
21 TraesCS6D01G165700 chr6A 95.748 588 17 3 568 1154 201367012 201367592 0.000000e+00 941.0
22 TraesCS6D01G165700 chr6A 91.737 593 23 10 8482 9051 201374726 201375315 0.000000e+00 800.0
23 TraesCS6D01G165700 chr6A 91.176 578 18 3 7904 8481 201374146 201374690 0.000000e+00 754.0
24 TraesCS6D01G165700 chr6A 86.411 574 48 13 2 561 201366307 201366864 1.340000e-167 601.0
25 TraesCS6D01G165700 chr6A 94.955 337 15 2 1183 1518 201367584 201367919 2.300000e-145 527.0
26 TraesCS6D01G165700 chr6A 92.105 304 14 2 1454 1747 201367914 201368217 4.020000e-113 420.0
27 TraesCS6D01G165700 chr6A 93.651 252 10 2 5897 6147 201372392 201372638 1.140000e-98 372.0
28 TraesCS6D01G165700 chr6A 97.581 124 3 0 5783 5906 201371943 201372066 7.330000e-51 213.0
29 TraesCS6D01G165700 chr6A 89.474 95 9 1 119 212 601390280 601390374 1.640000e-22 119.0
30 TraesCS6D01G165700 chr6A 91.429 70 6 0 2731 2800 61027719 61027788 7.700000e-16 97.1
31 TraesCS6D01G165700 chr6A 91.803 61 4 1 9257 9316 492289778 492289718 6.000000e-12 84.2
32 TraesCS6D01G165700 chr5A 89.147 258 27 1 5194 5450 535518504 535518761 4.200000e-83 320.0
33 TraesCS6D01G165700 chr5A 87.984 258 30 1 5194 5450 371024466 371024723 4.230000e-78 303.0
34 TraesCS6D01G165700 chr5A 94.624 186 9 1 7737 7922 349787348 349787532 4.260000e-73 287.0
35 TraesCS6D01G165700 chr5A 95.480 177 8 0 7737 7913 519179315 519179491 5.510000e-72 283.0
36 TraesCS6D01G165700 chr5A 92.737 179 11 2 6321 6498 475324529 475324352 3.340000e-64 257.0
37 TraesCS6D01G165700 chr5A 94.845 97 3 2 6134 6229 635512574 635512479 5.830000e-32 150.0
38 TraesCS6D01G165700 chr5A 88.298 94 11 0 119 212 354534313 354534220 7.650000e-21 113.0
39 TraesCS6D01G165700 chr5A 93.103 58 3 1 9257 9313 422462377 422462434 6.000000e-12 84.2
40 TraesCS6D01G165700 chr1D 88.372 258 27 3 5194 5450 285439497 285439752 3.270000e-79 307.0
41 TraesCS6D01G165700 chr1D 88.123 261 24 6 2543 2796 225405049 225405309 4.230000e-78 303.0
42 TraesCS6D01G165700 chr1D 95.082 183 6 3 7740 7919 238940215 238940397 1.530000e-72 285.0
43 TraesCS6D01G165700 chr1D 100.000 29 0 0 6294 6322 58573622 58573650 5.000000e-03 54.7
44 TraesCS6D01G165700 chr3A 86.909 275 32 3 5191 5463 721830157 721830429 1.180000e-78 305.0
45 TraesCS6D01G165700 chr3A 95.652 92 3 1 6139 6229 488042638 488042547 7.540000e-31 147.0
46 TraesCS6D01G165700 chr3A 87.500 104 9 4 111 212 629674880 629674981 5.910000e-22 117.0
47 TraesCS6D01G165700 chr3A 79.042 167 23 7 9105 9259 590154636 590154802 4.600000e-18 104.0
48 TraesCS6D01G165700 chr3A 94.340 53 3 0 5729 5781 360822508 360822560 2.160000e-11 82.4
49 TraesCS6D01G165700 chr3D 87.786 262 29 3 5191 5450 151444897 151445157 4.230000e-78 303.0
50 TraesCS6D01G165700 chr3D 87.984 258 30 1 5194 5450 341493336 341493079 4.230000e-78 303.0
51 TraesCS6D01G165700 chr4D 96.045 177 7 0 7737 7913 475719549 475719725 1.180000e-73 289.0
52 TraesCS6D01G165700 chr4D 96.296 162 6 0 6321 6482 334164552 334164391 5.550000e-67 267.0
53 TraesCS6D01G165700 chr4D 92.063 189 13 2 2542 2730 304305053 304304867 1.990000e-66 265.0
54 TraesCS6D01G165700 chr4D 90.306 196 16 3 2536 2730 479956932 479957125 4.320000e-63 254.0
55 TraesCS6D01G165700 chr4D 87.755 98 10 2 116 212 50754860 50754956 7.650000e-21 113.0
56 TraesCS6D01G165700 chr3B 95.082 183 8 1 7739 7921 571752691 571752510 4.260000e-73 287.0
57 TraesCS6D01G165700 chr3B 95.745 47 2 0 5729 5775 659588122 659588168 1.000000e-09 76.8
58 TraesCS6D01G165700 chr3B 88.333 60 4 3 215 273 576324745 576324802 1.680000e-07 69.4
59 TraesCS6D01G165700 chr3B 77.982 109 13 4 9105 9202 346990096 346990204 3.630000e-04 58.4
60 TraesCS6D01G165700 chr2D 94.595 185 10 0 7737 7921 207665128 207664944 4.260000e-73 287.0
61 TraesCS6D01G165700 chr2D 95.210 167 6 1 6321 6485 582498656 582498490 7.170000e-66 263.0
62 TraesCS6D01G165700 chr2D 83.333 78 9 4 5729 5803 267347193 267347117 1.680000e-07 69.4
63 TraesCS6D01G165700 chr5D 93.651 189 11 1 7737 7925 533712796 533712609 1.980000e-71 281.0
64 TraesCS6D01G165700 chr5D 92.647 68 5 0 2731 2798 73754646 73754579 2.140000e-16 99.0
65 TraesCS6D01G165700 chr5D 96.429 56 2 0 9262 9317 204085237 204085292 9.960000e-15 93.5
66 TraesCS6D01G165700 chr5D 96.364 55 2 0 9262 9316 196082527 196082473 3.580000e-14 91.6
67 TraesCS6D01G165700 chr7A 92.553 188 14 0 2543 2730 503428825 503428638 4.290000e-68 270.0
68 TraesCS6D01G165700 chr7A 93.000 100 6 1 6139 6237 68186871 68186970 2.710000e-30 145.0
69 TraesCS6D01G165700 chr7A 88.421 95 10 1 119 212 726906112 726906206 7.650000e-21 113.0
70 TraesCS6D01G165700 chr1A 92.021 188 15 0 2543 2730 208884129 208883942 1.990000e-66 265.0
71 TraesCS6D01G165700 chr1A 91.489 188 16 0 2543 2730 208893886 208894073 9.280000e-65 259.0
72 TraesCS6D01G165700 chr1A 77.679 224 29 16 2589 2797 202089643 202089426 5.910000e-22 117.0
73 TraesCS6D01G165700 chr1A 96.364 55 2 0 9262 9316 232517739 232517685 3.580000e-14 91.6
74 TraesCS6D01G165700 chr1A 85.455 55 8 0 6482 6536 31162224 31162170 3.630000e-04 58.4
75 TraesCS6D01G165700 chr4B 94.152 171 8 2 6317 6486 549841752 549841921 9.280000e-65 259.0
76 TraesCS6D01G165700 chr4B 96.667 90 2 1 6145 6233 142696664 142696575 2.100000e-31 148.0
77 TraesCS6D01G165700 chr4B 97.959 49 1 0 5726 5774 49466805 49466853 1.670000e-12 86.1
78 TraesCS6D01G165700 chr2B 94.152 171 8 2 6317 6486 206593723 206593554 9.280000e-65 259.0
79 TraesCS6D01G165700 chr2A 93.220 177 10 2 6315 6490 184561148 184561323 9.280000e-65 259.0
80 TraesCS6D01G165700 chr2A 86.239 218 24 5 6319 6533 744795933 744796147 2.020000e-56 231.0
81 TraesCS6D01G165700 chr2A 97.701 87 1 1 6145 6230 227632697 227632611 2.100000e-31 148.0
82 TraesCS6D01G165700 chr2A 97.701 87 1 1 6144 6229 589690421 589690507 2.100000e-31 148.0
83 TraesCS6D01G165700 chr2A 93.814 97 4 2 6134 6229 98882826 98882731 2.710000e-30 145.0
84 TraesCS6D01G165700 chr2A 88.421 95 10 1 119 212 35560068 35560162 7.650000e-21 113.0
85 TraesCS6D01G165700 chr2A 87.778 90 11 0 9158 9247 329108122 329108211 1.280000e-18 106.0
86 TraesCS6D01G165700 chr2A 96.364 55 2 0 9262 9316 256239970 256239916 3.580000e-14 91.6
87 TraesCS6D01G165700 chr2A 96.364 55 2 0 9262 9316 340754028 340753974 3.580000e-14 91.6
88 TraesCS6D01G165700 chrUn 91.489 188 14 1 2543 2730 129560447 129560632 3.340000e-64 257.0
89 TraesCS6D01G165700 chrUn 96.364 55 2 0 9262 9316 206731490 206731544 3.580000e-14 91.6
90 TraesCS6D01G165700 chrUn 96.364 55 2 0 9262 9316 329476656 329476710 3.580000e-14 91.6
91 TraesCS6D01G165700 chr7B 91.489 188 15 1 2543 2730 446166208 446166394 3.340000e-64 257.0
92 TraesCS6D01G165700 chr7B 96.703 91 2 1 6140 6229 605909704 605909614 5.830000e-32 150.0
93 TraesCS6D01G165700 chr7B 93.939 66 4 0 2731 2796 622247097 622247162 5.950000e-17 100.0
94 TraesCS6D01G165700 chr7B 100.000 28 0 0 6295 6322 522138237 522138210 1.700000e-02 52.8
95 TraesCS6D01G165700 chr5B 90.566 106 7 3 6125 6229 330847735 330847838 4.540000e-28 137.0
96 TraesCS6D01G165700 chr5B 88.421 95 10 1 119 212 554586008 554585914 7.650000e-21 113.0
97 TraesCS6D01G165700 chr5B 97.872 47 1 0 5729 5775 634526998 634526952 2.160000e-11 82.4
98 TraesCS6D01G165700 chr5B 100.000 28 0 0 8959 8986 315895519 315895546 1.700000e-02 52.8
99 TraesCS6D01G165700 chr1B 93.939 66 4 0 2731 2796 130642655 130642590 5.950000e-17 100.0
100 TraesCS6D01G165700 chr1B 85.714 56 6 2 6482 6536 49933992 49933938 3.630000e-04 58.4
101 TraesCS6D01G165700 chr7D 91.429 70 5 1 2731 2800 473621773 473621705 2.770000e-15 95.3
102 TraesCS6D01G165700 chr4A 97.826 46 1 0 5729 5774 567699924 567699879 7.760000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G165700 chr6D 145456143 145465459 9316 False 5468.033333 13104 98.518667 1 9317 3 chr6D.!!$F2 9316
1 TraesCS6D01G165700 chr6B 259287672 259298744 11072 False 1545.555556 3869 97.625000 248 8937 9 chr6B.!!$F2 8689
2 TraesCS6D01G165700 chr6A 201366307 201375315 9008 False 1090.909091 2706 93.796455 2 9051 11 chr6A.!!$F3 9049

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.107945 GAGGAGATTCAAGCGTGGCT 60.108 55.000 0.00 0.0 42.56 4.75 F
562 580 0.527817 CGCCCGTCTGGATTCTACAC 60.528 60.000 0.00 0.0 37.49 2.90 F
1191 1353 3.219281 GGAGTCTAGAGTGGCTTAGAGG 58.781 54.545 4.36 0.0 0.00 3.69 F
2241 2473 2.124278 GGACCCCTTTGATCCCGC 60.124 66.667 0.00 0.0 0.00 6.13 F
2712 3260 0.107081 CCCCTTTGTGTCCACGTGTA 59.893 55.000 15.65 0.0 0.00 2.90 F
2716 3264 0.533308 TTTGTGTCCACGTGTAGGCC 60.533 55.000 15.65 0.0 0.00 5.19 F
2723 3271 1.079127 CACGTGTAGGCCCCTTGAG 60.079 63.158 7.58 0.0 0.00 3.02 F
4165 4819 1.623311 TGCTCCTCAACTTCGGATTGA 59.377 47.619 0.00 0.0 34.89 2.57 F
6165 9424 1.702957 ACTCCTCCGTTCCAAAATGGA 59.297 47.619 0.00 0.0 46.61 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1116 1278 0.108585 AAGGAAGCGAACTGGAGCAA 59.891 50.000 0.00 0.0 35.48 3.91 R
1551 1773 0.259938 AGTCATCCAAATGGGCCTCC 59.740 55.000 4.53 0.0 36.21 4.30 R
2693 3241 0.107081 TACACGTGGACACAAAGGGG 59.893 55.000 21.57 0.0 0.00 4.79 R
4165 4819 2.094675 CATTCGGCTTTGGAGGTTCAT 58.905 47.619 0.00 0.0 0.00 2.57 R
4626 5334 1.001378 CTGCCTACTTGTGGTGTTTGC 60.001 52.381 0.00 0.0 0.00 3.68 R
5192 5901 4.004314 GACTAAAAAGGAACAGAGGGAGC 58.996 47.826 0.00 0.0 0.00 4.70 R
5553 6263 3.749609 AGTAACGGTCAAAGTTGCATACC 59.250 43.478 0.00 0.0 36.81 2.73 R
6219 9478 0.033011 TGCTCTCAGGTACTCCCTCC 60.033 60.000 0.00 0.0 43.86 4.30 R
8879 12205 0.250727 CAAGGCTCGGAGGGAACAAA 60.251 55.000 7.20 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.641648 GAGATCTGAGGAGATTCAAGCG 58.358 50.000 0.00 0.00 39.19 4.68
25 26 0.391661 TGAGGAGATTCAAGCGTGGC 60.392 55.000 0.00 0.00 0.00 5.01
26 27 0.107945 GAGGAGATTCAAGCGTGGCT 60.108 55.000 0.00 0.00 42.56 4.75
72 77 3.665173 GTCCATGAGACGAGAAATTGC 57.335 47.619 0.00 0.00 35.30 3.56
87 92 8.655970 ACGAGAAATTGCAATAATTTTAAAGCC 58.344 29.630 13.39 0.00 30.68 4.35
122 127 2.610433 GCAAGATGCTTTGTTAAGGGC 58.390 47.619 0.00 0.00 40.96 5.19
125 130 2.450476 AGATGCTTTGTTAAGGGCCAG 58.550 47.619 6.18 0.00 31.76 4.85
136 141 5.202004 TGTTAAGGGCCAGTTCTTTTGTTA 58.798 37.500 6.18 0.00 0.00 2.41
172 182 5.491323 GCTGAAATAAGCTACCCCTATCT 57.509 43.478 0.00 0.00 40.20 1.98
174 184 6.635755 GCTGAAATAAGCTACCCCTATCTAG 58.364 44.000 0.00 0.00 40.20 2.43
244 255 5.937111 TGGATAAGGGGCAACTTATTCTAC 58.063 41.667 15.96 8.72 42.19 2.59
251 262 3.352648 GGCAACTTATTCTACAAGCCCA 58.647 45.455 0.00 0.00 34.94 5.36
324 335 7.823799 TGCTCAATGTCTGTAAACATTCTGATA 59.176 33.333 0.00 0.00 45.68 2.15
400 413 1.750682 GCCTAAACGGGATCATTGCCT 60.751 52.381 0.00 0.00 0.00 4.75
405 418 0.620556 ACGGGATCATTGCCTGAGTT 59.379 50.000 0.00 0.00 37.28 3.01
406 419 1.837439 ACGGGATCATTGCCTGAGTTA 59.163 47.619 0.00 0.00 37.28 2.24
489 506 1.546773 CCAAAACCGGAGAACCATCCA 60.547 52.381 9.46 0.00 39.53 3.41
490 507 2.235016 CAAAACCGGAGAACCATCCAA 58.765 47.619 9.46 0.00 39.53 3.53
557 575 1.144057 ACATCGCCCGTCTGGATTC 59.856 57.895 0.00 0.00 37.49 2.52
562 580 0.527817 CGCCCGTCTGGATTCTACAC 60.528 60.000 0.00 0.00 37.49 2.90
1108 1270 4.649218 ACTGCAACAATTTGGTAGGTTTCT 59.351 37.500 0.78 0.00 32.81 2.52
1115 1277 7.554959 ACAATTTGGTAGGTTTCTCTCTAGA 57.445 36.000 0.78 0.00 0.00 2.43
1116 1278 8.152023 ACAATTTGGTAGGTTTCTCTCTAGAT 57.848 34.615 0.78 0.00 0.00 1.98
1191 1353 3.219281 GGAGTCTAGAGTGGCTTAGAGG 58.781 54.545 4.36 0.00 0.00 3.69
1378 1541 3.495753 CCGTGGTCCTAAATAAATACGGC 59.504 47.826 0.00 0.00 42.47 5.68
1551 1773 2.795329 AGCTACCAATGTGGAAACTGG 58.205 47.619 0.18 0.00 40.96 4.00
1743 1975 8.628280 TGTTGTCAATTGTTCATGTTCTATTCA 58.372 29.630 5.13 0.00 0.00 2.57
2240 2472 2.595655 GGGACCCCTTTGATCCCG 59.404 66.667 0.00 0.00 42.78 5.14
2241 2473 2.124278 GGACCCCTTTGATCCCGC 60.124 66.667 0.00 0.00 0.00 6.13
2442 2990 5.382618 TCCATCGTGTCTCTGATATGATG 57.617 43.478 15.12 15.12 42.66 3.07
2472 3020 9.113876 CCATCTAATGTTTTTAACGTGAAGAAC 57.886 33.333 11.31 11.31 31.19 3.01
2545 3093 5.163530 TGCCCATTGATGTCATATTTGTGTC 60.164 40.000 0.00 0.00 0.00 3.67
2557 3105 9.030301 TGTCATATTTGTGTCGAAGTGTATATG 57.970 33.333 9.88 9.88 0.00 1.78
2577 3125 2.179427 GTGGATTGCCTAGCCCTTTTT 58.821 47.619 0.00 0.00 34.31 1.94
2585 3133 4.270008 TGCCTAGCCCTTTTTATCAGTTC 58.730 43.478 0.00 0.00 0.00 3.01
2586 3134 4.263727 TGCCTAGCCCTTTTTATCAGTTCA 60.264 41.667 0.00 0.00 0.00 3.18
2631 3179 3.628942 TGCATGAAGCTTGACATGGTATC 59.371 43.478 22.64 11.22 45.94 2.24
2694 3242 7.994425 ATTTATCCAAAAATTGTTGTTCCCC 57.006 32.000 7.58 0.00 0.00 4.81
2695 3243 3.847671 TCCAAAAATTGTTGTTCCCCC 57.152 42.857 7.58 0.00 0.00 5.40
2709 3257 2.513895 CCCCCTTTGTGTCCACGT 59.486 61.111 0.00 0.00 0.00 4.49
2710 3258 1.896660 CCCCCTTTGTGTCCACGTG 60.897 63.158 9.08 9.08 0.00 4.49
2711 3259 1.153046 CCCCTTTGTGTCCACGTGT 60.153 57.895 15.65 0.00 0.00 4.49
2712 3260 0.107081 CCCCTTTGTGTCCACGTGTA 59.893 55.000 15.65 0.00 0.00 2.90
2713 3261 1.508632 CCCTTTGTGTCCACGTGTAG 58.491 55.000 15.65 0.00 0.00 2.74
2714 3262 1.508632 CCTTTGTGTCCACGTGTAGG 58.491 55.000 15.65 0.00 0.00 3.18
2715 3263 0.865769 CTTTGTGTCCACGTGTAGGC 59.134 55.000 15.65 1.69 0.00 3.93
2716 3264 0.533308 TTTGTGTCCACGTGTAGGCC 60.533 55.000 15.65 0.00 0.00 5.19
2717 3265 2.047560 GTGTCCACGTGTAGGCCC 60.048 66.667 15.65 0.00 0.00 5.80
2718 3266 3.315949 TGTCCACGTGTAGGCCCC 61.316 66.667 15.65 0.00 0.00 5.80
2719 3267 3.001406 GTCCACGTGTAGGCCCCT 61.001 66.667 15.65 0.00 0.00 4.79
2720 3268 2.203877 TCCACGTGTAGGCCCCTT 60.204 61.111 15.65 0.00 0.00 3.95
2721 3269 2.046314 CCACGTGTAGGCCCCTTG 60.046 66.667 15.65 0.00 0.00 3.61
2722 3270 2.589157 CCACGTGTAGGCCCCTTGA 61.589 63.158 15.65 0.00 0.00 3.02
2723 3271 1.079127 CACGTGTAGGCCCCTTGAG 60.079 63.158 7.58 0.00 0.00 3.02
2724 3272 2.291043 ACGTGTAGGCCCCTTGAGG 61.291 63.158 0.00 0.00 0.00 3.86
4165 4819 1.623311 TGCTCCTCAACTTCGGATTGA 59.377 47.619 0.00 0.00 34.89 2.57
4351 5059 4.424061 TGTCTTGCATGTTTCATACTGC 57.576 40.909 0.00 0.00 33.93 4.40
4626 5334 2.048503 GCTTTTGGCCAGCAGCAG 60.049 61.111 26.00 12.23 46.50 4.24
5192 5901 5.286438 CCATTGCTTGATTGATGTGGTATG 58.714 41.667 0.00 0.00 0.00 2.39
5553 6263 2.535574 GCTTTTTGTTTTGCAGTCTCCG 59.464 45.455 0.00 0.00 0.00 4.63
5748 6458 9.268268 CCTTACAGTTGTACTAAATCAAAGACA 57.732 33.333 0.00 0.00 0.00 3.41
5777 6490 2.237893 TGGGACGGAGGGAGTATTTTTC 59.762 50.000 0.00 0.00 0.00 2.29
6162 9421 6.911250 AAAAATACTCCTCCGTTCCAAAAT 57.089 33.333 0.00 0.00 0.00 1.82
6163 9422 5.897377 AAATACTCCTCCGTTCCAAAATG 57.103 39.130 0.00 0.00 0.00 2.32
6164 9423 2.200373 ACTCCTCCGTTCCAAAATGG 57.800 50.000 0.00 0.00 42.15 3.16
6165 9424 1.702957 ACTCCTCCGTTCCAAAATGGA 59.297 47.619 0.00 0.00 46.61 3.41
6181 9440 8.956426 TCCAAAATGGATGACTCAACTTTATAC 58.044 33.333 0.00 0.00 42.67 1.47
6182 9441 8.960591 CCAAAATGGATGACTCAACTTTATACT 58.039 33.333 0.00 0.00 40.96 2.12
6219 9478 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
6220 9479 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
6221 9480 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
6222 9481 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
6223 9482 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
6224 9483 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
6546 9805 7.577303 AGGGAGTATAACACATGTTCATTGAT 58.423 34.615 0.00 0.00 39.31 2.57
6558 9817 7.383029 CACATGTTCATTGATGTTAACAGCTTT 59.617 33.333 23.17 9.03 35.48 3.51
6944 10210 1.839354 TGCAGTCATATCCTCAGGCAA 59.161 47.619 0.00 0.00 0.00 4.52
7253 10535 3.857157 ACACTTCCTGCTTTACCTTGA 57.143 42.857 0.00 0.00 0.00 3.02
7254 10536 4.373156 ACACTTCCTGCTTTACCTTGAT 57.627 40.909 0.00 0.00 0.00 2.57
7677 10965 8.100791 TCCTGTAAGTTGAAATGTTAGTGCTAT 58.899 33.333 0.00 0.00 0.00 2.97
7761 11050 8.120538 TCATATACTCCCTCCGTTCCTAAATAT 58.879 37.037 0.00 0.00 0.00 1.28
7770 11059 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
7872 11161 7.328493 CGTATGTAGTCACTTGTTGAAATCTCA 59.672 37.037 0.00 0.00 35.39 3.27
8082 11371 2.025981 ACTAGCATCCCACTTGCAATGA 60.026 45.455 0.00 0.00 42.62 2.57
8131 11420 5.987953 TCAAATCTGATAAGAGCGATCAAGG 59.012 40.000 2.38 0.00 33.01 3.61
8132 11421 3.377346 TCTGATAAGAGCGATCAAGGC 57.623 47.619 2.38 0.00 33.01 4.35
8133 11422 2.961741 TCTGATAAGAGCGATCAAGGCT 59.038 45.455 2.38 0.00 45.00 4.58
8134 11423 3.058450 CTGATAAGAGCGATCAAGGCTG 58.942 50.000 2.38 0.00 41.72 4.85
8135 11424 2.432146 TGATAAGAGCGATCAAGGCTGT 59.568 45.455 2.38 0.00 41.72 4.40
8136 11425 3.636764 TGATAAGAGCGATCAAGGCTGTA 59.363 43.478 2.38 0.00 41.72 2.74
8137 11426 4.281941 TGATAAGAGCGATCAAGGCTGTAT 59.718 41.667 2.38 0.00 41.72 2.29
8138 11427 2.522836 AGAGCGATCAAGGCTGTATG 57.477 50.000 2.38 0.00 41.72 2.39
8139 11428 1.759445 AGAGCGATCAAGGCTGTATGT 59.241 47.619 2.38 0.00 41.72 2.29
8140 11429 1.863454 GAGCGATCAAGGCTGTATGTG 59.137 52.381 0.00 0.00 41.72 3.21
8174 11463 2.229792 TGTGATCTTTCTGGCAACACC 58.770 47.619 0.00 0.00 46.17 4.16
8720 12045 1.814394 TGCAATGCATGACTGAAGGAC 59.186 47.619 2.72 0.00 31.71 3.85
8839 12165 3.635373 GGGAGGAACGATCTATACACACA 59.365 47.826 0.00 0.00 0.00 3.72
8847 12173 7.201444 GGAACGATCTATACACACAAGTTTGAG 60.201 40.741 0.00 0.00 0.00 3.02
8879 12205 2.242043 CTTGGATTGGACTTTGCCTGT 58.758 47.619 0.00 0.00 0.00 4.00
8896 12222 1.375326 GTTTGTTCCCTCCGAGCCT 59.625 57.895 0.00 0.00 0.00 4.58
8946 12272 7.660112 CAGACTTAGAGCTTGATCATGTATCT 58.340 38.462 16.87 16.87 35.45 1.98
8950 12276 8.575589 ACTTAGAGCTTGATCATGTATCTGTAG 58.424 37.037 19.65 18.03 35.45 2.74
8955 12281 9.270640 GAGCTTGATCATGTATCTGTAGAAAAT 57.729 33.333 10.05 0.00 35.45 1.82
9003 12350 5.932619 ACCATTTATAGAAAGTTTGGGCC 57.067 39.130 0.00 0.00 29.75 5.80
9004 12351 5.337788 ACCATTTATAGAAAGTTTGGGCCA 58.662 37.500 0.00 0.00 29.75 5.36
9009 12356 8.720562 CATTTATAGAAAGTTTGGGCCAAAAAG 58.279 33.333 31.94 7.02 35.03 2.27
9010 12357 7.604657 TTATAGAAAGTTTGGGCCAAAAAGA 57.395 32.000 31.94 14.95 35.03 2.52
9011 12358 4.137116 AGAAAGTTTGGGCCAAAAAGAC 57.863 40.909 31.94 20.66 35.03 3.01
9012 12359 2.595124 AAGTTTGGGCCAAAAAGACG 57.405 45.000 31.94 0.00 35.03 4.18
9053 12400 7.923414 ATAGGATCTTGTAAACTTGACCAAC 57.077 36.000 0.00 0.00 0.00 3.77
9054 12401 5.941788 AGGATCTTGTAAACTTGACCAACT 58.058 37.500 0.00 0.00 0.00 3.16
9055 12402 6.365520 AGGATCTTGTAAACTTGACCAACTT 58.634 36.000 0.00 0.00 0.00 2.66
9056 12403 6.263168 AGGATCTTGTAAACTTGACCAACTTG 59.737 38.462 0.00 0.00 0.00 3.16
9057 12404 6.262273 GGATCTTGTAAACTTGACCAACTTGA 59.738 38.462 0.00 0.00 0.00 3.02
9058 12405 6.431198 TCTTGTAAACTTGACCAACTTGAC 57.569 37.500 0.00 0.00 0.00 3.18
9059 12406 5.355910 TCTTGTAAACTTGACCAACTTGACC 59.644 40.000 0.00 0.00 0.00 4.02
9060 12407 3.949113 TGTAAACTTGACCAACTTGACCC 59.051 43.478 0.00 0.00 0.00 4.46
9061 12408 2.067365 AACTTGACCAACTTGACCCC 57.933 50.000 0.00 0.00 0.00 4.95
9062 12409 0.923358 ACTTGACCAACTTGACCCCA 59.077 50.000 0.00 0.00 0.00 4.96
9063 12410 1.286553 ACTTGACCAACTTGACCCCAA 59.713 47.619 0.00 0.00 0.00 4.12
9064 12411 1.681264 CTTGACCAACTTGACCCCAAC 59.319 52.381 0.00 0.00 0.00 3.77
9065 12412 0.923358 TGACCAACTTGACCCCAACT 59.077 50.000 0.00 0.00 0.00 3.16
9066 12413 1.286553 TGACCAACTTGACCCCAACTT 59.713 47.619 0.00 0.00 0.00 2.66
9067 12414 1.954382 GACCAACTTGACCCCAACTTC 59.046 52.381 0.00 0.00 0.00 3.01
9068 12415 1.328279 CCAACTTGACCCCAACTTCC 58.672 55.000 0.00 0.00 0.00 3.46
9069 12416 1.328279 CAACTTGACCCCAACTTCCC 58.672 55.000 0.00 0.00 0.00 3.97
9070 12417 0.930726 AACTTGACCCCAACTTCCCA 59.069 50.000 0.00 0.00 0.00 4.37
9071 12418 1.158007 ACTTGACCCCAACTTCCCAT 58.842 50.000 0.00 0.00 0.00 4.00
9072 12419 1.503347 ACTTGACCCCAACTTCCCATT 59.497 47.619 0.00 0.00 0.00 3.16
9073 12420 1.895131 CTTGACCCCAACTTCCCATTG 59.105 52.381 0.00 0.00 0.00 2.82
9074 12421 0.114168 TGACCCCAACTTCCCATTGG 59.886 55.000 0.00 0.00 45.36 3.16
9075 12422 1.229177 ACCCCAACTTCCCATTGGC 60.229 57.895 0.00 0.00 44.57 4.52
9076 12423 1.079073 CCCCAACTTCCCATTGGCT 59.921 57.895 0.00 0.00 44.57 4.75
9077 12424 0.334676 CCCCAACTTCCCATTGGCTA 59.665 55.000 0.00 0.00 44.57 3.93
9078 12425 1.272985 CCCCAACTTCCCATTGGCTAA 60.273 52.381 0.00 0.00 44.57 3.09
9079 12426 2.102578 CCCAACTTCCCATTGGCTAAG 58.897 52.381 12.19 12.19 44.57 2.18
9080 12427 2.102578 CCAACTTCCCATTGGCTAAGG 58.897 52.381 16.15 0.00 40.25 2.69
9081 12428 2.102578 CAACTTCCCATTGGCTAAGGG 58.897 52.381 6.51 6.51 44.22 3.95
9087 12434 1.986882 CCATTGGCTAAGGGGCTAAG 58.013 55.000 5.47 0.00 41.48 2.18
9088 12435 1.479389 CCATTGGCTAAGGGGCTAAGG 60.479 57.143 5.47 0.00 41.48 2.69
9089 12436 0.853530 ATTGGCTAAGGGGCTAAGGG 59.146 55.000 0.00 0.00 41.48 3.95
9090 12437 0.253441 TTGGCTAAGGGGCTAAGGGA 60.253 55.000 0.00 0.00 41.48 4.20
9091 12438 0.694444 TGGCTAAGGGGCTAAGGGAG 60.694 60.000 0.00 0.00 41.48 4.30
9092 12439 0.400093 GGCTAAGGGGCTAAGGGAGA 60.400 60.000 0.00 0.00 37.53 3.71
9093 12440 1.052617 GCTAAGGGGCTAAGGGAGAG 58.947 60.000 0.00 0.00 0.00 3.20
9094 12441 1.693083 GCTAAGGGGCTAAGGGAGAGT 60.693 57.143 0.00 0.00 0.00 3.24
9095 12442 2.765502 CTAAGGGGCTAAGGGAGAGTT 58.234 52.381 0.00 0.00 0.00 3.01
9096 12443 2.061264 AAGGGGCTAAGGGAGAGTTT 57.939 50.000 0.00 0.00 0.00 2.66
9097 12444 2.061264 AGGGGCTAAGGGAGAGTTTT 57.939 50.000 0.00 0.00 0.00 2.43
9098 12445 2.359243 AGGGGCTAAGGGAGAGTTTTT 58.641 47.619 0.00 0.00 0.00 1.94
9117 12464 3.819564 TTTATGCGAGCATCCTACAGT 57.180 42.857 14.35 0.00 37.82 3.55
9118 12465 3.371102 TTATGCGAGCATCCTACAGTC 57.629 47.619 14.35 0.00 37.82 3.51
9119 12466 1.114627 ATGCGAGCATCCTACAGTCA 58.885 50.000 4.52 0.00 29.42 3.41
9120 12467 1.114627 TGCGAGCATCCTACAGTCAT 58.885 50.000 0.00 0.00 0.00 3.06
9121 12468 1.067669 TGCGAGCATCCTACAGTCATC 59.932 52.381 0.00 0.00 0.00 2.92
9122 12469 1.604185 GCGAGCATCCTACAGTCATCC 60.604 57.143 0.00 0.00 0.00 3.51
9123 12470 1.000283 CGAGCATCCTACAGTCATCCC 60.000 57.143 0.00 0.00 0.00 3.85
9124 12471 2.042464 GAGCATCCTACAGTCATCCCA 58.958 52.381 0.00 0.00 0.00 4.37
9125 12472 2.636893 GAGCATCCTACAGTCATCCCAT 59.363 50.000 0.00 0.00 0.00 4.00
9126 12473 2.371179 AGCATCCTACAGTCATCCCATG 59.629 50.000 0.00 0.00 0.00 3.66
9127 12474 2.105477 GCATCCTACAGTCATCCCATGT 59.895 50.000 0.00 0.00 0.00 3.21
9128 12475 3.324846 GCATCCTACAGTCATCCCATGTA 59.675 47.826 0.00 0.00 0.00 2.29
9129 12476 4.800914 GCATCCTACAGTCATCCCATGTAC 60.801 50.000 0.00 0.00 0.00 2.90
9130 12477 3.989056 TCCTACAGTCATCCCATGTACA 58.011 45.455 0.00 0.00 0.00 2.90
9131 12478 3.704566 TCCTACAGTCATCCCATGTACAC 59.295 47.826 0.00 0.00 0.00 2.90
9132 12479 3.706594 CCTACAGTCATCCCATGTACACT 59.293 47.826 0.00 0.00 0.00 3.55
9133 12480 4.893524 CCTACAGTCATCCCATGTACACTA 59.106 45.833 0.00 0.00 0.00 2.74
9134 12481 5.540337 CCTACAGTCATCCCATGTACACTAT 59.460 44.000 0.00 0.00 0.00 2.12
9135 12482 5.282055 ACAGTCATCCCATGTACACTATG 57.718 43.478 0.00 0.00 0.00 2.23
9136 12483 4.962362 ACAGTCATCCCATGTACACTATGA 59.038 41.667 0.00 2.52 0.00 2.15
9137 12484 5.163405 ACAGTCATCCCATGTACACTATGAC 60.163 44.000 22.10 22.10 42.12 3.06
9138 12485 5.211973 AGTCATCCCATGTACACTATGACT 58.788 41.667 24.44 24.44 45.25 3.41
9139 12486 6.650427 GTCATCCCATGTACACTATGACTA 57.350 41.667 22.21 2.34 39.88 2.59
9140 12487 6.448006 GTCATCCCATGTACACTATGACTAC 58.552 44.000 22.21 5.94 39.88 2.73
9141 12488 5.538813 TCATCCCATGTACACTATGACTACC 59.461 44.000 0.00 0.00 0.00 3.18
9142 12489 4.220724 TCCCATGTACACTATGACTACCC 58.779 47.826 0.00 0.00 0.00 3.69
9143 12490 3.323979 CCCATGTACACTATGACTACCCC 59.676 52.174 0.00 0.00 0.00 4.95
9144 12491 3.323979 CCATGTACACTATGACTACCCCC 59.676 52.174 0.00 0.00 0.00 5.40
9160 12507 2.734755 CCCCCAAGCATATGTTGAGA 57.265 50.000 15.37 0.00 0.00 3.27
9161 12508 2.301346 CCCCCAAGCATATGTTGAGAC 58.699 52.381 15.37 0.00 0.00 3.36
9162 12509 2.301346 CCCCAAGCATATGTTGAGACC 58.699 52.381 15.37 0.00 0.00 3.85
9163 12510 2.092212 CCCCAAGCATATGTTGAGACCT 60.092 50.000 15.37 0.00 0.00 3.85
9164 12511 3.624777 CCCAAGCATATGTTGAGACCTT 58.375 45.455 15.37 2.72 0.00 3.50
9165 12512 3.379372 CCCAAGCATATGTTGAGACCTTG 59.621 47.826 15.37 12.22 0.00 3.61
9166 12513 4.264253 CCAAGCATATGTTGAGACCTTGA 58.736 43.478 14.74 0.00 32.22 3.02
9167 12514 4.334759 CCAAGCATATGTTGAGACCTTGAG 59.665 45.833 14.74 5.44 32.22 3.02
9168 12515 3.539604 AGCATATGTTGAGACCTTGAGC 58.460 45.455 4.29 0.00 0.00 4.26
9169 12516 3.054875 AGCATATGTTGAGACCTTGAGCA 60.055 43.478 4.29 0.00 0.00 4.26
9170 12517 3.064545 GCATATGTTGAGACCTTGAGCAC 59.935 47.826 4.29 0.00 0.00 4.40
9171 12518 2.936919 ATGTTGAGACCTTGAGCACA 57.063 45.000 0.00 0.00 0.00 4.57
9172 12519 1.953559 TGTTGAGACCTTGAGCACAC 58.046 50.000 0.00 0.00 0.00 3.82
9173 12520 0.861837 GTTGAGACCTTGAGCACACG 59.138 55.000 0.00 0.00 0.00 4.49
9174 12521 0.464036 TTGAGACCTTGAGCACACGT 59.536 50.000 0.00 0.00 0.00 4.49
9175 12522 0.032130 TGAGACCTTGAGCACACGTC 59.968 55.000 3.24 3.24 0.00 4.34
9176 12523 0.032130 GAGACCTTGAGCACACGTCA 59.968 55.000 11.48 0.00 31.71 4.35
9177 12524 0.681733 AGACCTTGAGCACACGTCAT 59.318 50.000 11.48 0.00 31.71 3.06
9178 12525 1.070758 AGACCTTGAGCACACGTCATT 59.929 47.619 11.48 0.00 31.71 2.57
9179 12526 1.195448 GACCTTGAGCACACGTCATTG 59.805 52.381 5.88 0.00 0.00 2.82
9180 12527 0.518636 CCTTGAGCACACGTCATTGG 59.481 55.000 0.00 0.00 0.00 3.16
9181 12528 1.511850 CTTGAGCACACGTCATTGGA 58.488 50.000 0.00 0.00 0.00 3.53
9182 12529 1.195448 CTTGAGCACACGTCATTGGAC 59.805 52.381 0.00 0.00 40.77 4.02
9183 12530 0.105778 TGAGCACACGTCATTGGACA 59.894 50.000 0.00 0.00 44.54 4.02
9184 12531 0.512952 GAGCACACGTCATTGGACAC 59.487 55.000 0.00 0.00 44.54 3.67
9185 12532 0.179059 AGCACACGTCATTGGACACA 60.179 50.000 0.00 0.00 44.54 3.72
9186 12533 0.660488 GCACACGTCATTGGACACAA 59.340 50.000 0.00 0.00 44.54 3.33
9187 12534 1.334059 GCACACGTCATTGGACACAAG 60.334 52.381 0.00 0.00 44.54 3.16
9188 12535 1.264020 CACACGTCATTGGACACAAGG 59.736 52.381 0.00 0.00 44.54 3.61
9189 12536 1.134220 ACACGTCATTGGACACAAGGT 60.134 47.619 0.00 0.00 44.54 3.50
9190 12537 1.946768 CACGTCATTGGACACAAGGTT 59.053 47.619 0.00 0.00 44.54 3.50
9191 12538 3.135225 CACGTCATTGGACACAAGGTTA 58.865 45.455 0.00 0.00 44.54 2.85
9192 12539 3.562141 CACGTCATTGGACACAAGGTTAA 59.438 43.478 0.00 0.00 44.54 2.01
9193 12540 3.562557 ACGTCATTGGACACAAGGTTAAC 59.437 43.478 0.00 0.00 44.54 2.01
9194 12541 3.813166 CGTCATTGGACACAAGGTTAACT 59.187 43.478 5.42 0.00 44.54 2.24
9195 12542 4.274950 CGTCATTGGACACAAGGTTAACTT 59.725 41.667 5.42 0.00 44.54 2.66
9196 12543 5.519722 GTCATTGGACACAAGGTTAACTTG 58.480 41.667 8.64 8.64 46.67 3.16
9197 12544 6.016309 GTCATTGGACACAAGGTTAACTTGC 61.016 44.000 10.24 0.00 45.97 4.01
9198 12545 8.123601 GTCATTGGACACAAGGTTAACTTGCT 62.124 42.308 10.24 0.00 45.97 3.91
9199 12546 9.789713 GTCATTGGACACAAGGTTAACTTGCTC 62.790 44.444 10.24 4.94 45.97 4.26
9207 12554 4.706842 AGGTTAACTTGCTCCTCTTTGA 57.293 40.909 5.42 0.00 0.00 2.69
9208 12555 5.048846 AGGTTAACTTGCTCCTCTTTGAA 57.951 39.130 5.42 0.00 0.00 2.69
9209 12556 4.822350 AGGTTAACTTGCTCCTCTTTGAAC 59.178 41.667 5.42 0.00 0.00 3.18
9210 12557 4.319549 GGTTAACTTGCTCCTCTTTGAACG 60.320 45.833 5.42 0.00 0.00 3.95
9211 12558 1.884235 ACTTGCTCCTCTTTGAACGG 58.116 50.000 0.00 0.00 0.00 4.44
9212 12559 1.141053 ACTTGCTCCTCTTTGAACGGT 59.859 47.619 0.00 0.00 0.00 4.83
9213 12560 1.801178 CTTGCTCCTCTTTGAACGGTC 59.199 52.381 0.00 0.00 0.00 4.79
9214 12561 0.756294 TGCTCCTCTTTGAACGGTCA 59.244 50.000 0.00 0.00 0.00 4.02
9215 12562 1.149148 GCTCCTCTTTGAACGGTCAC 58.851 55.000 0.44 0.00 31.90 3.67
9216 12563 1.270358 GCTCCTCTTTGAACGGTCACT 60.270 52.381 0.44 0.00 31.90 3.41
9217 12564 2.807108 GCTCCTCTTTGAACGGTCACTT 60.807 50.000 0.44 0.00 31.90 3.16
9218 12565 3.467803 CTCCTCTTTGAACGGTCACTTT 58.532 45.455 0.44 0.00 31.90 2.66
9219 12566 3.877508 CTCCTCTTTGAACGGTCACTTTT 59.122 43.478 0.44 0.00 31.90 2.27
9220 12567 4.266714 TCCTCTTTGAACGGTCACTTTTT 58.733 39.130 0.44 0.00 31.90 1.94
9221 12568 5.430007 TCCTCTTTGAACGGTCACTTTTTA 58.570 37.500 0.44 0.00 31.90 1.52
9222 12569 5.295045 TCCTCTTTGAACGGTCACTTTTTAC 59.705 40.000 0.44 0.00 31.90 2.01
9223 12570 5.065474 CCTCTTTGAACGGTCACTTTTTACA 59.935 40.000 0.44 0.00 31.90 2.41
9224 12571 6.238648 CCTCTTTGAACGGTCACTTTTTACAT 60.239 38.462 0.44 0.00 31.90 2.29
9225 12572 7.041644 CCTCTTTGAACGGTCACTTTTTACATA 60.042 37.037 0.44 0.00 31.90 2.29
9226 12573 8.385898 TCTTTGAACGGTCACTTTTTACATAT 57.614 30.769 0.44 0.00 31.90 1.78
9227 12574 8.286800 TCTTTGAACGGTCACTTTTTACATATG 58.713 33.333 0.44 0.00 31.90 1.78
9228 12575 7.731882 TTGAACGGTCACTTTTTACATATGA 57.268 32.000 0.44 0.00 31.90 2.15
9229 12576 7.359262 TGAACGGTCACTTTTTACATATGAG 57.641 36.000 10.38 0.00 0.00 2.90
9230 12577 7.156000 TGAACGGTCACTTTTTACATATGAGA 58.844 34.615 10.38 0.00 0.00 3.27
9231 12578 6.963049 ACGGTCACTTTTTACATATGAGAC 57.037 37.500 10.38 4.25 0.00 3.36
9232 12579 6.460781 ACGGTCACTTTTTACATATGAGACA 58.539 36.000 10.38 0.00 0.00 3.41
9233 12580 7.103641 ACGGTCACTTTTTACATATGAGACAT 58.896 34.615 10.38 0.00 0.00 3.06
9234 12581 7.064609 ACGGTCACTTTTTACATATGAGACATG 59.935 37.037 10.38 0.00 0.00 3.21
9235 12582 7.465916 CGGTCACTTTTTACATATGAGACATGG 60.466 40.741 10.38 0.00 0.00 3.66
9236 12583 7.189512 GTCACTTTTTACATATGAGACATGGC 58.810 38.462 10.38 0.00 0.00 4.40
9237 12584 6.318648 TCACTTTTTACATATGAGACATGGCC 59.681 38.462 10.38 0.00 0.00 5.36
9238 12585 6.095300 CACTTTTTACATATGAGACATGGCCA 59.905 38.462 8.56 8.56 0.00 5.36
9239 12586 6.095440 ACTTTTTACATATGAGACATGGCCAC 59.905 38.462 8.16 0.00 0.00 5.01
9240 12587 5.372343 TTTACATATGAGACATGGCCACT 57.628 39.130 8.16 0.00 0.00 4.00
9241 12588 6.493189 TTTACATATGAGACATGGCCACTA 57.507 37.500 8.16 0.00 0.00 2.74
9242 12589 4.342862 ACATATGAGACATGGCCACTAC 57.657 45.455 8.16 1.46 0.00 2.73
9243 12590 3.071602 ACATATGAGACATGGCCACTACC 59.928 47.826 8.16 0.00 0.00 3.18
9244 12591 1.885049 ATGAGACATGGCCACTACCT 58.115 50.000 8.16 2.43 0.00 3.08
9245 12592 1.195115 TGAGACATGGCCACTACCTC 58.805 55.000 8.16 13.23 0.00 3.85
9246 12593 1.195115 GAGACATGGCCACTACCTCA 58.805 55.000 8.16 0.00 0.00 3.86
9247 12594 1.765314 GAGACATGGCCACTACCTCAT 59.235 52.381 8.16 0.00 0.00 2.90
9248 12595 1.487976 AGACATGGCCACTACCTCATG 59.512 52.381 8.16 1.39 41.74 3.07
9249 12596 0.107017 ACATGGCCACTACCTCATGC 60.107 55.000 8.16 0.00 40.22 4.06
9250 12597 0.107066 CATGGCCACTACCTCATGCA 60.107 55.000 8.16 0.00 32.04 3.96
9251 12598 0.848735 ATGGCCACTACCTCATGCAT 59.151 50.000 8.16 0.00 0.00 3.96
9252 12599 0.107066 TGGCCACTACCTCATGCATG 60.107 55.000 21.07 21.07 0.00 4.06
9253 12600 0.820891 GGCCACTACCTCATGCATGG 60.821 60.000 25.97 14.00 0.00 3.66
9254 12601 0.181114 GCCACTACCTCATGCATGGA 59.819 55.000 25.97 12.05 0.00 3.41
9255 12602 1.959042 CCACTACCTCATGCATGGAC 58.041 55.000 25.97 0.00 0.00 4.02
9256 12603 1.475751 CCACTACCTCATGCATGGACC 60.476 57.143 25.97 0.00 0.00 4.46
9257 12604 1.487976 CACTACCTCATGCATGGACCT 59.512 52.381 25.97 9.20 0.00 3.85
9258 12605 2.092753 CACTACCTCATGCATGGACCTT 60.093 50.000 25.97 9.23 0.00 3.50
9259 12606 2.578021 ACTACCTCATGCATGGACCTTT 59.422 45.455 25.97 7.91 0.00 3.11
9260 12607 2.610438 ACCTCATGCATGGACCTTTT 57.390 45.000 25.97 1.84 0.00 2.27
9261 12608 3.737559 ACCTCATGCATGGACCTTTTA 57.262 42.857 25.97 3.58 0.00 1.52
9262 12609 3.356290 ACCTCATGCATGGACCTTTTAC 58.644 45.455 25.97 0.00 0.00 2.01
9263 12610 3.245229 ACCTCATGCATGGACCTTTTACA 60.245 43.478 25.97 2.08 0.00 2.41
9264 12611 3.956199 CCTCATGCATGGACCTTTTACAT 59.044 43.478 25.97 0.00 0.00 2.29
9265 12612 4.202080 CCTCATGCATGGACCTTTTACATG 60.202 45.833 25.97 0.00 43.58 3.21
9266 12613 4.343231 TCATGCATGGACCTTTTACATGT 58.657 39.130 25.97 2.69 42.89 3.21
9267 12614 4.158209 TCATGCATGGACCTTTTACATGTG 59.842 41.667 25.97 0.00 42.89 3.21
9268 12615 3.760738 TGCATGGACCTTTTACATGTGA 58.239 40.909 9.11 0.00 42.89 3.58
9269 12616 3.758023 TGCATGGACCTTTTACATGTGAG 59.242 43.478 9.11 3.73 42.89 3.51
9270 12617 4.009675 GCATGGACCTTTTACATGTGAGA 58.990 43.478 9.11 0.00 42.89 3.27
9271 12618 4.142600 GCATGGACCTTTTACATGTGAGAC 60.143 45.833 9.11 2.39 42.89 3.36
9272 12619 4.698201 TGGACCTTTTACATGTGAGACA 57.302 40.909 9.11 2.05 0.00 3.41
9273 12620 5.241403 TGGACCTTTTACATGTGAGACAT 57.759 39.130 9.11 0.00 39.91 3.06
9282 12629 2.698855 ATGTGAGACATGGCCACTAC 57.301 50.000 8.16 1.46 37.45 2.73
9283 12630 0.613260 TGTGAGACATGGCCACTACC 59.387 55.000 8.16 0.00 0.00 3.18
9284 12631 0.905357 GTGAGACATGGCCACTACCT 59.095 55.000 8.16 2.43 0.00 3.08
9285 12632 1.134670 GTGAGACATGGCCACTACCTC 60.135 57.143 8.16 13.23 0.00 3.85
9286 12633 1.195115 GAGACATGGCCACTACCTCA 58.805 55.000 8.16 0.00 0.00 3.86
9287 12634 1.765314 GAGACATGGCCACTACCTCAT 59.235 52.381 8.16 0.00 0.00 2.90
9288 12635 1.487976 AGACATGGCCACTACCTCATG 59.512 52.381 8.16 1.39 41.74 3.07
9289 12636 0.107017 ACATGGCCACTACCTCATGC 60.107 55.000 8.16 0.00 40.22 4.06
9290 12637 0.107066 CATGGCCACTACCTCATGCA 60.107 55.000 8.16 0.00 32.04 3.96
9291 12638 0.848735 ATGGCCACTACCTCATGCAT 59.151 50.000 8.16 0.00 0.00 3.96
9292 12639 0.107066 TGGCCACTACCTCATGCATG 60.107 55.000 21.07 21.07 0.00 4.06
9293 12640 0.820891 GGCCACTACCTCATGCATGG 60.821 60.000 25.97 14.00 0.00 3.66
9294 12641 0.181114 GCCACTACCTCATGCATGGA 59.819 55.000 25.97 12.05 0.00 3.41
9295 12642 1.959042 CCACTACCTCATGCATGGAC 58.041 55.000 25.97 0.00 0.00 4.02
9296 12643 1.475751 CCACTACCTCATGCATGGACC 60.476 57.143 25.97 0.00 0.00 4.46
9297 12644 1.487976 CACTACCTCATGCATGGACCT 59.512 52.381 25.97 9.20 0.00 3.85
9298 12645 2.092753 CACTACCTCATGCATGGACCTT 60.093 50.000 25.97 9.23 0.00 3.50
9299 12646 2.092753 ACTACCTCATGCATGGACCTTG 60.093 50.000 25.97 14.11 0.00 3.61
9300 12647 0.700564 ACCTCATGCATGGACCTTGT 59.299 50.000 25.97 11.37 0.00 3.16
9301 12648 1.100510 CCTCATGCATGGACCTTGTG 58.899 55.000 25.97 0.00 0.00 3.33
9302 12649 1.615116 CCTCATGCATGGACCTTGTGT 60.615 52.381 25.97 0.00 0.00 3.72
9303 12650 2.356022 CCTCATGCATGGACCTTGTGTA 60.356 50.000 25.97 2.08 0.00 2.90
9304 12651 3.548770 CTCATGCATGGACCTTGTGTAT 58.451 45.455 25.97 0.52 0.00 2.29
9305 12652 4.444733 CCTCATGCATGGACCTTGTGTATA 60.445 45.833 25.97 1.34 0.00 1.47
9306 12653 4.450976 TCATGCATGGACCTTGTGTATAC 58.549 43.478 25.97 0.00 0.00 1.47
9307 12654 4.164030 TCATGCATGGACCTTGTGTATACT 59.836 41.667 25.97 0.00 0.00 2.12
9308 12655 4.137116 TGCATGGACCTTGTGTATACTC 57.863 45.455 9.01 0.83 0.00 2.59
9309 12656 3.517500 TGCATGGACCTTGTGTATACTCA 59.482 43.478 9.01 3.83 0.00 3.41
9310 12657 4.122776 GCATGGACCTTGTGTATACTCAG 58.877 47.826 9.01 1.12 0.00 3.35
9311 12658 4.697514 CATGGACCTTGTGTATACTCAGG 58.302 47.826 15.76 15.76 35.34 3.86
9312 12659 2.500098 TGGACCTTGTGTATACTCAGGC 59.500 50.000 16.63 7.17 33.56 4.85
9313 12660 2.500098 GGACCTTGTGTATACTCAGGCA 59.500 50.000 16.63 2.16 33.56 4.75
9314 12661 3.522553 GACCTTGTGTATACTCAGGCAC 58.477 50.000 16.63 11.00 33.56 5.01
9315 12662 2.903784 ACCTTGTGTATACTCAGGCACA 59.096 45.455 16.63 5.73 39.68 4.57
9316 12663 3.055819 ACCTTGTGTATACTCAGGCACAG 60.056 47.826 16.63 8.85 41.89 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.068024 ACGCTTGAATCTCCTCAGATCTC 59.932 47.826 0.00 0.00 38.55 2.75
1 2 3.030291 ACGCTTGAATCTCCTCAGATCT 58.970 45.455 0.00 0.00 38.55 2.75
2 3 3.122297 CACGCTTGAATCTCCTCAGATC 58.878 50.000 0.00 0.00 38.55 2.75
3 4 2.158986 CCACGCTTGAATCTCCTCAGAT 60.159 50.000 0.00 0.00 41.59 2.90
4 5 1.205655 CCACGCTTGAATCTCCTCAGA 59.794 52.381 0.00 0.00 0.00 3.27
5 6 1.649664 CCACGCTTGAATCTCCTCAG 58.350 55.000 0.00 0.00 0.00 3.35
6 7 0.391661 GCCACGCTTGAATCTCCTCA 60.392 55.000 0.00 0.00 0.00 3.86
7 8 0.107945 AGCCACGCTTGAATCTCCTC 60.108 55.000 0.00 0.00 33.89 3.71
8 9 0.392193 CAGCCACGCTTGAATCTCCT 60.392 55.000 0.00 0.00 36.40 3.69
9 10 1.986575 GCAGCCACGCTTGAATCTCC 61.987 60.000 0.00 0.00 36.40 3.71
21 22 2.050077 GCAAAGTTCGGCAGCCAC 60.050 61.111 13.30 2.52 0.00 5.01
25 26 0.386478 GCAGAAGCAAAGTTCGGCAG 60.386 55.000 4.15 0.00 44.28 4.85
26 27 0.819259 AGCAGAAGCAAAGTTCGGCA 60.819 50.000 10.29 0.00 46.42 5.69
63 68 8.945057 TGGGCTTTAAAATTATTGCAATTTCTC 58.055 29.630 18.75 0.00 0.00 2.87
72 77 7.277760 GCTAGGTTGTGGGCTTTAAAATTATTG 59.722 37.037 0.00 0.00 0.00 1.90
87 92 3.334583 TCTTGCTTAGCTAGGTTGTGG 57.665 47.619 14.90 0.00 32.69 4.17
119 124 2.239400 AGCTAACAAAAGAACTGGCCC 58.761 47.619 0.00 0.00 0.00 5.80
122 127 7.730364 TTCTAGAAGCTAACAAAAGAACTGG 57.270 36.000 0.00 0.00 0.00 4.00
125 130 9.762062 GCTTATTCTAGAAGCTAACAAAAGAAC 57.238 33.333 11.53 0.00 44.83 3.01
210 220 4.079212 TGCCCCTTATCCAGCTTATTCTTT 60.079 41.667 0.00 0.00 0.00 2.52
217 227 1.002857 AGTTGCCCCTTATCCAGCTT 58.997 50.000 0.00 0.00 0.00 3.74
219 229 2.729028 TAAGTTGCCCCTTATCCAGC 57.271 50.000 0.00 0.00 0.00 4.85
220 230 5.053978 AGAATAAGTTGCCCCTTATCCAG 57.946 43.478 5.68 0.00 36.79 3.86
222 232 5.937111 TGTAGAATAAGTTGCCCCTTATCC 58.063 41.667 5.68 0.00 36.79 2.59
261 272 2.354510 CACTTGCGGTCAGTTCTTTTGA 59.645 45.455 0.00 0.00 0.00 2.69
273 284 4.555709 TCGGCCAACACTTGCGGT 62.556 61.111 2.24 0.00 0.00 5.68
324 335 6.743575 AACACTGCTAAGCTTTATCGATTT 57.256 33.333 3.20 0.00 0.00 2.17
489 506 0.111061 GAACGGTGGTAGGGGGTTTT 59.889 55.000 0.00 0.00 0.00 2.43
490 507 1.763120 GAACGGTGGTAGGGGGTTT 59.237 57.895 0.00 0.00 0.00 3.27
557 575 3.155167 GGAGGGAGGCGGGTGTAG 61.155 72.222 0.00 0.00 0.00 2.74
686 847 4.084693 GCGCGTGTTAGTAGAAAAGAGTTT 60.085 41.667 8.43 0.00 0.00 2.66
1108 1270 2.099921 GCGAACTGGAGCAATCTAGAGA 59.900 50.000 0.00 0.00 0.00 3.10
1115 1277 0.326264 AGGAAGCGAACTGGAGCAAT 59.674 50.000 0.00 0.00 35.48 3.56
1116 1278 0.108585 AAGGAAGCGAACTGGAGCAA 59.891 50.000 0.00 0.00 35.48 3.91
1191 1353 1.696832 GGCGGATGAAGTCAAGCGAC 61.697 60.000 0.00 0.00 42.95 5.19
1378 1541 1.001048 CCAACACCATGCTTGTGACTG 60.001 52.381 7.48 4.70 37.18 3.51
1551 1773 0.259938 AGTCATCCAAATGGGCCTCC 59.740 55.000 4.53 0.00 36.21 4.30
2222 2454 3.016260 GGGATCAAAGGGGTCCCC 58.984 66.667 20.85 20.85 44.80 4.81
2223 2455 2.595655 CGGGATCAAAGGGGTCCC 59.404 66.667 0.00 0.00 46.63 4.46
2224 2456 2.124278 GCGGGATCAAAGGGGTCC 60.124 66.667 0.00 0.00 0.00 4.46
2225 2457 2.124278 GGCGGGATCAAAGGGGTC 60.124 66.667 0.00 0.00 0.00 4.46
2226 2458 4.109675 CGGCGGGATCAAAGGGGT 62.110 66.667 0.00 0.00 0.00 4.95
2227 2459 3.120086 ATCGGCGGGATCAAAGGGG 62.120 63.158 7.21 0.00 0.00 4.79
2228 2460 1.893808 CATCGGCGGGATCAAAGGG 60.894 63.158 7.21 0.00 31.28 3.95
2229 2461 2.546494 GCATCGGCGGGATCAAAGG 61.546 63.158 7.21 0.00 31.28 3.11
2230 2462 3.025619 GCATCGGCGGGATCAAAG 58.974 61.111 7.21 0.00 31.28 2.77
2372 2728 6.980397 GCAATTTTATGCATAGCAAACTAGGT 59.020 34.615 6.50 0.00 43.62 3.08
2442 2990 6.858993 TCACGTTAAAAACATTAGATGGTTGC 59.141 34.615 0.00 0.00 39.78 4.17
2472 3020 2.768698 TGGCTTGTCCATTTTGCATTG 58.231 42.857 0.00 0.00 40.72 2.82
2545 3093 4.380531 AGGCAATCCACATATACACTTCG 58.619 43.478 0.00 0.00 33.74 3.79
2557 3105 1.852633 AAAAGGGCTAGGCAATCCAC 58.147 50.000 19.14 0.00 33.74 4.02
2577 3125 4.213270 CGCAACCAAAAGTCTGAACTGATA 59.787 41.667 0.00 0.00 35.36 2.15
2585 3133 1.134175 ACCAACGCAACCAAAAGTCTG 59.866 47.619 0.00 0.00 0.00 3.51
2586 3134 1.470051 ACCAACGCAACCAAAAGTCT 58.530 45.000 0.00 0.00 0.00 3.24
2631 3179 1.280457 ACTCAAGACCTTAGGCCCTG 58.720 55.000 0.00 0.00 0.00 4.45
2672 3220 5.870706 GGGGGAACAACAATTTTTGGATAA 58.129 37.500 9.06 0.00 34.12 1.75
2673 3221 5.491323 GGGGGAACAACAATTTTTGGATA 57.509 39.130 9.06 0.00 34.12 2.59
2674 3222 4.365514 GGGGGAACAACAATTTTTGGAT 57.634 40.909 9.06 0.00 34.12 3.41
2675 3223 3.847671 GGGGGAACAACAATTTTTGGA 57.152 42.857 9.06 0.00 34.12 3.53
2692 3240 1.896660 CACGTGGACACAAAGGGGG 60.897 63.158 7.95 0.00 0.00 5.40
2693 3241 0.107081 TACACGTGGACACAAAGGGG 59.893 55.000 21.57 0.00 0.00 4.79
2694 3242 1.508632 CTACACGTGGACACAAAGGG 58.491 55.000 21.57 0.00 0.00 3.95
2695 3243 1.508632 CCTACACGTGGACACAAAGG 58.491 55.000 21.57 3.50 0.00 3.11
2696 3244 0.865769 GCCTACACGTGGACACAAAG 59.134 55.000 21.57 0.00 0.00 2.77
2697 3245 0.533308 GGCCTACACGTGGACACAAA 60.533 55.000 21.57 0.00 31.53 2.83
2698 3246 1.070105 GGCCTACACGTGGACACAA 59.930 57.895 21.57 0.00 31.53 3.33
2699 3247 2.738480 GGCCTACACGTGGACACA 59.262 61.111 21.57 0.00 31.53 3.72
2700 3248 2.047560 GGGCCTACACGTGGACAC 60.048 66.667 21.57 3.38 33.26 3.67
2701 3249 3.315949 GGGGCCTACACGTGGACA 61.316 66.667 21.57 3.45 33.26 4.02
2702 3250 2.590114 AAGGGGCCTACACGTGGAC 61.590 63.158 21.57 3.67 0.00 4.02
2703 3251 2.203877 AAGGGGCCTACACGTGGA 60.204 61.111 21.57 11.23 0.00 4.02
2704 3252 2.046314 CAAGGGGCCTACACGTGG 60.046 66.667 21.57 2.78 0.00 4.94
2705 3253 1.079127 CTCAAGGGGCCTACACGTG 60.079 63.158 15.48 15.48 0.00 4.49
2706 3254 2.291043 CCTCAAGGGGCCTACACGT 61.291 63.158 0.84 0.00 0.00 4.49
2707 3255 2.584608 CCTCAAGGGGCCTACACG 59.415 66.667 0.84 0.00 0.00 4.49
2708 3256 2.272471 GCCTCAAGGGGCCTACAC 59.728 66.667 0.84 0.00 45.92 2.90
2715 3263 0.474184 AATCCGTATGCCTCAAGGGG 59.526 55.000 0.00 0.00 35.18 4.79
2716 3264 1.597742 CAATCCGTATGCCTCAAGGG 58.402 55.000 0.00 0.00 35.18 3.95
2717 3265 0.947244 GCAATCCGTATGCCTCAAGG 59.053 55.000 0.00 0.00 37.85 3.61
2724 3272 0.955919 GGGCTAGGCAATCCGTATGC 60.956 60.000 19.14 0.00 43.08 3.14
2897 3548 3.244700 ACAAGCTGGCACTCATAAGTTCT 60.245 43.478 0.00 0.00 31.71 3.01
4165 4819 2.094675 CATTCGGCTTTGGAGGTTCAT 58.905 47.619 0.00 0.00 0.00 2.57
4351 5059 1.202510 GCTGGCAGTAGATGTCCTCTG 60.203 57.143 17.16 0.00 35.28 3.35
4626 5334 1.001378 CTGCCTACTTGTGGTGTTTGC 60.001 52.381 0.00 0.00 0.00 3.68
5192 5901 4.004314 GACTAAAAAGGAACAGAGGGAGC 58.996 47.826 0.00 0.00 0.00 4.70
5553 6263 3.749609 AGTAACGGTCAAAGTTGCATACC 59.250 43.478 0.00 0.00 36.81 2.73
5748 6458 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
6142 9401 4.018779 TCCATTTTGGAACGGAGGAGTATT 60.019 41.667 0.00 0.00 45.00 1.89
6143 9402 3.521937 TCCATTTTGGAACGGAGGAGTAT 59.478 43.478 0.00 0.00 45.00 2.12
6144 9403 2.907696 TCCATTTTGGAACGGAGGAGTA 59.092 45.455 0.00 0.00 45.00 2.59
6145 9404 1.702957 TCCATTTTGGAACGGAGGAGT 59.297 47.619 0.00 0.00 45.00 3.85
6146 9405 2.489938 TCCATTTTGGAACGGAGGAG 57.510 50.000 0.00 0.00 45.00 3.69
6156 9415 8.960591 AGTATAAAGTTGAGTCATCCATTTTGG 58.039 33.333 0.00 0.00 39.43 3.28
6193 9452 8.717821 CGTTCCAAAATAGATGACTCAACTTTA 58.282 33.333 0.00 0.00 0.00 1.85
6194 9453 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
6195 9454 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
6196 9455 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
6197 9456 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
6198 9457 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
6199 9458 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
6200 9459 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
6201 9460 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
6202 9461 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
6203 9462 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
6204 9463 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
6205 9464 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
6206 9465 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
6207 9466 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
6208 9467 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
6209 9468 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
6210 9469 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
6211 9470 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
6212 9471 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
6213 9472 0.613853 CAGGTACTCCCTCCGTTCCA 60.614 60.000 0.00 0.00 43.86 3.53
6214 9473 0.324091 TCAGGTACTCCCTCCGTTCC 60.324 60.000 0.00 0.00 43.86 3.62
6215 9474 1.104630 CTCAGGTACTCCCTCCGTTC 58.895 60.000 0.00 0.00 43.86 3.95
6216 9475 0.702902 TCTCAGGTACTCCCTCCGTT 59.297 55.000 0.00 0.00 43.86 4.44
6217 9476 0.256464 CTCTCAGGTACTCCCTCCGT 59.744 60.000 0.00 0.00 43.86 4.69
6218 9477 1.104577 GCTCTCAGGTACTCCCTCCG 61.105 65.000 0.00 0.00 43.86 4.63
6219 9478 0.033011 TGCTCTCAGGTACTCCCTCC 60.033 60.000 0.00 0.00 43.86 4.30
6220 9479 1.960689 GATGCTCTCAGGTACTCCCTC 59.039 57.143 0.00 0.00 43.86 4.30
6222 9481 1.781786 TGATGCTCTCAGGTACTCCC 58.218 55.000 0.00 0.00 34.60 4.30
6223 9482 4.560513 GCTAATGATGCTCTCAGGTACTCC 60.561 50.000 0.00 0.00 37.28 3.85
6224 9483 4.555262 GCTAATGATGCTCTCAGGTACTC 58.445 47.826 0.00 0.00 37.28 2.59
6558 9817 6.631971 ACACATGTCAACACATATGAACAA 57.368 33.333 10.38 0.00 39.47 2.83
6629 9895 7.656137 TCAGCTTATCACGTTCTTAAAAAGACT 59.344 33.333 0.00 0.00 37.23 3.24
6944 10210 8.862325 TGTTGATATGTAGGTTGAGAAAATGT 57.138 30.769 0.00 0.00 0.00 2.71
7677 10965 1.302366 CTCGGCTCATATGCAAAGCA 58.698 50.000 14.73 0.00 44.86 3.91
7723 11012 6.864421 AGGGAGTATATGACTAAGATGTGGA 58.136 40.000 0.00 0.00 39.06 4.02
7770 11059 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
7821 11110 7.192232 GGAGCAAAATGAGTGAATCTACATTC 58.808 38.462 0.00 0.00 39.24 2.67
7894 11183 9.901651 TTTGTTACCTATATTATACTCCCTCCA 57.098 33.333 0.00 0.00 0.00 3.86
8037 11326 9.775854 AGTAGGATGAAGATGAAATAATCACAG 57.224 33.333 0.00 0.00 41.93 3.66
8082 11371 2.158534 TGCAAACAAGGACTACCCATGT 60.159 45.455 0.00 0.00 38.03 3.21
8131 11420 6.183360 ACAATAAACATACAGCCACATACAGC 60.183 38.462 0.00 0.00 0.00 4.40
8132 11421 7.065683 TCACAATAAACATACAGCCACATACAG 59.934 37.037 0.00 0.00 0.00 2.74
8133 11422 6.881602 TCACAATAAACATACAGCCACATACA 59.118 34.615 0.00 0.00 0.00 2.29
8134 11423 7.315247 TCACAATAAACATACAGCCACATAC 57.685 36.000 0.00 0.00 0.00 2.39
8135 11424 7.992608 AGATCACAATAAACATACAGCCACATA 59.007 33.333 0.00 0.00 0.00 2.29
8136 11425 6.830324 AGATCACAATAAACATACAGCCACAT 59.170 34.615 0.00 0.00 0.00 3.21
8137 11426 6.179756 AGATCACAATAAACATACAGCCACA 58.820 36.000 0.00 0.00 0.00 4.17
8138 11427 6.683974 AGATCACAATAAACATACAGCCAC 57.316 37.500 0.00 0.00 0.00 5.01
8139 11428 7.611467 AGAAAGATCACAATAAACATACAGCCA 59.389 33.333 0.00 0.00 0.00 4.75
8140 11429 7.912250 CAGAAAGATCACAATAAACATACAGCC 59.088 37.037 0.00 0.00 0.00 4.85
8408 11697 3.444742 CAGGGCTTTGTGCATTCTTATCA 59.555 43.478 0.00 0.00 45.15 2.15
8839 12165 6.042143 CCAAGTGTATTTGTTGCTCAAACTT 58.958 36.000 9.12 6.87 46.77 2.66
8847 12173 4.923281 GTCCAATCCAAGTGTATTTGTTGC 59.077 41.667 0.00 0.00 0.00 4.17
8858 12184 2.242043 CAGGCAAAGTCCAATCCAAGT 58.758 47.619 0.00 0.00 0.00 3.16
8879 12205 0.250727 CAAGGCTCGGAGGGAACAAA 60.251 55.000 7.20 0.00 0.00 2.83
8896 12222 2.841988 GCCAAGCACCAACCCCAA 60.842 61.111 0.00 0.00 0.00 4.12
8955 12281 7.351166 ACTCCCTCCGATCCAAAATTATTTTA 58.649 34.615 2.37 0.00 0.00 1.52
8956 12282 6.194967 ACTCCCTCCGATCCAAAATTATTTT 58.805 36.000 0.00 0.00 0.00 1.82
8957 12283 5.766590 ACTCCCTCCGATCCAAAATTATTT 58.233 37.500 0.00 0.00 0.00 1.40
8959 12285 5.221864 GGTACTCCCTCCGATCCAAAATTAT 60.222 44.000 0.00 0.00 0.00 1.28
8960 12286 4.102054 GGTACTCCCTCCGATCCAAAATTA 59.898 45.833 0.00 0.00 0.00 1.40
8961 12287 3.118000 GGTACTCCCTCCGATCCAAAATT 60.118 47.826 0.00 0.00 0.00 1.82
8973 12320 9.110502 CAAACTTTCTATAAATGGTACTCCCTC 57.889 37.037 0.00 0.00 0.00 4.30
9003 12350 8.574196 AAATTTATTCCACAGACGTCTTTTTG 57.426 30.769 17.26 13.03 0.00 2.44
9009 12356 8.882415 TCCTATAAATTTATTCCACAGACGTC 57.118 34.615 15.64 7.70 0.00 4.34
9010 12357 9.490379 GATCCTATAAATTTATTCCACAGACGT 57.510 33.333 15.64 0.00 0.00 4.34
9011 12358 9.712305 AGATCCTATAAATTTATTCCACAGACG 57.288 33.333 15.64 0.00 0.00 4.18
9051 12398 0.930726 TGGGAAGTTGGGGTCAAGTT 59.069 50.000 0.00 0.00 46.01 2.66
9052 12399 1.158007 ATGGGAAGTTGGGGTCAAGT 58.842 50.000 0.00 0.00 38.11 3.16
9053 12400 1.895131 CAATGGGAAGTTGGGGTCAAG 59.105 52.381 0.00 0.00 32.92 3.02
9054 12401 1.482177 CCAATGGGAAGTTGGGGTCAA 60.482 52.381 0.00 0.00 41.90 3.18
9055 12402 0.114168 CCAATGGGAAGTTGGGGTCA 59.886 55.000 0.00 0.00 41.90 4.02
9056 12403 1.257750 GCCAATGGGAAGTTGGGGTC 61.258 60.000 0.00 0.00 44.96 4.46
9057 12404 1.229177 GCCAATGGGAAGTTGGGGT 60.229 57.895 0.00 0.00 44.96 4.95
9058 12405 0.334676 TAGCCAATGGGAAGTTGGGG 59.665 55.000 0.00 0.00 44.96 4.96
9059 12406 2.102578 CTTAGCCAATGGGAAGTTGGG 58.897 52.381 0.00 0.00 44.96 4.12
9061 12408 2.102578 CCCTTAGCCAATGGGAAGTTG 58.897 52.381 0.00 0.00 43.47 3.16
9062 12409 1.007118 CCCCTTAGCCAATGGGAAGTT 59.993 52.381 0.00 0.00 41.03 2.66
9063 12410 0.631212 CCCCTTAGCCAATGGGAAGT 59.369 55.000 0.00 0.00 41.03 3.01
9064 12411 0.756815 GCCCCTTAGCCAATGGGAAG 60.757 60.000 9.37 0.00 41.03 3.46
9065 12412 1.221213 AGCCCCTTAGCCAATGGGAA 61.221 55.000 9.37 0.00 41.03 3.97
9066 12413 0.328061 TAGCCCCTTAGCCAATGGGA 60.328 55.000 9.37 0.00 41.03 4.37
9067 12414 0.555769 TTAGCCCCTTAGCCAATGGG 59.444 55.000 0.00 0.77 41.37 4.00
9068 12415 1.479389 CCTTAGCCCCTTAGCCAATGG 60.479 57.143 0.00 0.00 0.00 3.16
9069 12416 1.479389 CCCTTAGCCCCTTAGCCAATG 60.479 57.143 0.00 0.00 0.00 2.82
9070 12417 0.853530 CCCTTAGCCCCTTAGCCAAT 59.146 55.000 0.00 0.00 0.00 3.16
9071 12418 0.253441 TCCCTTAGCCCCTTAGCCAA 60.253 55.000 0.00 0.00 0.00 4.52
9072 12419 0.694444 CTCCCTTAGCCCCTTAGCCA 60.694 60.000 0.00 0.00 0.00 4.75
9073 12420 0.400093 TCTCCCTTAGCCCCTTAGCC 60.400 60.000 0.00 0.00 0.00 3.93
9074 12421 1.052617 CTCTCCCTTAGCCCCTTAGC 58.947 60.000 0.00 0.00 0.00 3.09
9075 12422 2.480642 ACTCTCCCTTAGCCCCTTAG 57.519 55.000 0.00 0.00 0.00 2.18
9076 12423 2.963654 AACTCTCCCTTAGCCCCTTA 57.036 50.000 0.00 0.00 0.00 2.69
9077 12424 2.061264 AAACTCTCCCTTAGCCCCTT 57.939 50.000 0.00 0.00 0.00 3.95
9078 12425 2.061264 AAAACTCTCCCTTAGCCCCT 57.939 50.000 0.00 0.00 0.00 4.79
9079 12426 2.901338 AAAAACTCTCCCTTAGCCCC 57.099 50.000 0.00 0.00 0.00 5.80
9095 12442 4.513442 ACTGTAGGATGCTCGCATAAAAA 58.487 39.130 4.10 0.00 36.70 1.94
9096 12443 4.119862 GACTGTAGGATGCTCGCATAAAA 58.880 43.478 4.10 0.00 36.70 1.52
9097 12444 3.132111 TGACTGTAGGATGCTCGCATAAA 59.868 43.478 4.10 0.00 36.70 1.40
9098 12445 2.693074 TGACTGTAGGATGCTCGCATAA 59.307 45.455 4.10 0.00 36.70 1.90
9099 12446 2.306847 TGACTGTAGGATGCTCGCATA 58.693 47.619 4.10 0.00 36.70 3.14
9100 12447 1.114627 TGACTGTAGGATGCTCGCAT 58.885 50.000 3.70 3.70 39.69 4.73
9101 12448 1.067669 GATGACTGTAGGATGCTCGCA 59.932 52.381 0.00 0.00 0.00 5.10
9102 12449 1.604185 GGATGACTGTAGGATGCTCGC 60.604 57.143 0.00 0.00 0.00 5.03
9103 12450 1.000283 GGGATGACTGTAGGATGCTCG 60.000 57.143 0.00 0.00 0.00 5.03
9104 12451 2.042464 TGGGATGACTGTAGGATGCTC 58.958 52.381 0.00 0.00 0.00 4.26
9105 12452 2.180946 TGGGATGACTGTAGGATGCT 57.819 50.000 0.00 0.00 0.00 3.79
9106 12453 2.105477 ACATGGGATGACTGTAGGATGC 59.895 50.000 0.00 0.00 0.00 3.91
9107 12454 4.344968 TGTACATGGGATGACTGTAGGATG 59.655 45.833 0.00 0.00 0.00 3.51
9108 12455 4.345257 GTGTACATGGGATGACTGTAGGAT 59.655 45.833 0.00 0.00 0.00 3.24
9109 12456 3.704566 GTGTACATGGGATGACTGTAGGA 59.295 47.826 0.00 0.00 0.00 2.94
9110 12457 3.706594 AGTGTACATGGGATGACTGTAGG 59.293 47.826 0.00 0.00 0.00 3.18
9111 12458 6.265422 TCATAGTGTACATGGGATGACTGTAG 59.735 42.308 0.00 0.00 0.00 2.74
9112 12459 6.040504 GTCATAGTGTACATGGGATGACTGTA 59.959 42.308 22.30 0.00 39.89 2.74
9113 12460 4.962362 TCATAGTGTACATGGGATGACTGT 59.038 41.667 0.00 0.00 0.00 3.55
9114 12461 5.292765 GTCATAGTGTACATGGGATGACTG 58.707 45.833 22.30 5.71 39.89 3.51
9115 12462 5.211973 AGTCATAGTGTACATGGGATGACT 58.788 41.667 24.49 24.49 45.33 3.41
9116 12463 5.537300 AGTCATAGTGTACATGGGATGAC 57.463 43.478 22.19 22.19 42.16 3.06
9117 12464 5.538813 GGTAGTCATAGTGTACATGGGATGA 59.461 44.000 0.00 3.53 0.00 2.92
9118 12465 5.279506 GGGTAGTCATAGTGTACATGGGATG 60.280 48.000 0.00 1.09 0.00 3.51
9119 12466 4.838986 GGGTAGTCATAGTGTACATGGGAT 59.161 45.833 0.00 0.00 0.00 3.85
9120 12467 4.220724 GGGTAGTCATAGTGTACATGGGA 58.779 47.826 0.00 0.00 0.00 4.37
9121 12468 3.323979 GGGGTAGTCATAGTGTACATGGG 59.676 52.174 0.00 0.00 0.00 4.00
9122 12469 3.323979 GGGGGTAGTCATAGTGTACATGG 59.676 52.174 0.00 0.00 0.00 3.66
9123 12470 4.602340 GGGGGTAGTCATAGTGTACATG 57.398 50.000 0.00 0.00 0.00 3.21
9141 12488 2.301346 GTCTCAACATATGCTTGGGGG 58.699 52.381 14.16 8.12 0.00 5.40
9142 12489 2.092212 AGGTCTCAACATATGCTTGGGG 60.092 50.000 14.16 9.73 0.00 4.96
9143 12490 3.287867 AGGTCTCAACATATGCTTGGG 57.712 47.619 1.58 7.05 0.00 4.12
9144 12491 4.264253 TCAAGGTCTCAACATATGCTTGG 58.736 43.478 1.58 2.46 30.71 3.61
9145 12492 4.201891 GCTCAAGGTCTCAACATATGCTTG 60.202 45.833 1.58 6.63 30.87 4.01
9146 12493 3.944015 GCTCAAGGTCTCAACATATGCTT 59.056 43.478 1.58 0.00 0.00 3.91
9147 12494 3.054875 TGCTCAAGGTCTCAACATATGCT 60.055 43.478 1.58 0.00 0.00 3.79
9148 12495 3.064545 GTGCTCAAGGTCTCAACATATGC 59.935 47.826 1.58 0.00 0.00 3.14
9149 12496 4.093998 GTGTGCTCAAGGTCTCAACATATG 59.906 45.833 0.00 0.00 0.00 1.78
9150 12497 4.256920 GTGTGCTCAAGGTCTCAACATAT 58.743 43.478 0.00 0.00 0.00 1.78
9151 12498 3.664107 GTGTGCTCAAGGTCTCAACATA 58.336 45.455 0.00 0.00 0.00 2.29
9152 12499 2.498167 GTGTGCTCAAGGTCTCAACAT 58.502 47.619 0.00 0.00 0.00 2.71
9153 12500 1.806247 CGTGTGCTCAAGGTCTCAACA 60.806 52.381 0.00 0.00 0.00 3.33
9154 12501 0.861837 CGTGTGCTCAAGGTCTCAAC 59.138 55.000 0.00 0.00 0.00 3.18
9155 12502 0.464036 ACGTGTGCTCAAGGTCTCAA 59.536 50.000 6.65 0.00 0.00 3.02
9156 12503 0.032130 GACGTGTGCTCAAGGTCTCA 59.968 55.000 0.00 0.00 0.00 3.27
9157 12504 0.032130 TGACGTGTGCTCAAGGTCTC 59.968 55.000 17.08 4.18 33.38 3.36
9158 12505 0.681733 ATGACGTGTGCTCAAGGTCT 59.318 50.000 17.08 5.61 33.38 3.85
9159 12506 1.195448 CAATGACGTGTGCTCAAGGTC 59.805 52.381 0.00 12.02 33.06 3.85
9160 12507 1.229428 CAATGACGTGTGCTCAAGGT 58.771 50.000 0.00 0.45 0.00 3.50
9161 12508 0.518636 CCAATGACGTGTGCTCAAGG 59.481 55.000 0.00 0.00 0.00 3.61
9162 12509 1.195448 GTCCAATGACGTGTGCTCAAG 59.805 52.381 0.00 0.00 0.00 3.02
9163 12510 1.225855 GTCCAATGACGTGTGCTCAA 58.774 50.000 0.00 0.00 0.00 3.02
9164 12511 0.105778 TGTCCAATGACGTGTGCTCA 59.894 50.000 0.00 0.00 44.86 4.26
9165 12512 0.512952 GTGTCCAATGACGTGTGCTC 59.487 55.000 0.00 0.00 44.86 4.26
9166 12513 0.179059 TGTGTCCAATGACGTGTGCT 60.179 50.000 0.00 0.00 44.86 4.40
9167 12514 0.660488 TTGTGTCCAATGACGTGTGC 59.340 50.000 0.00 0.00 44.86 4.57
9168 12515 1.264020 CCTTGTGTCCAATGACGTGTG 59.736 52.381 0.00 0.00 44.86 3.82
9169 12516 1.134220 ACCTTGTGTCCAATGACGTGT 60.134 47.619 0.00 0.00 44.86 4.49
9170 12517 1.593196 ACCTTGTGTCCAATGACGTG 58.407 50.000 0.00 0.00 44.86 4.49
9171 12518 2.341846 AACCTTGTGTCCAATGACGT 57.658 45.000 0.00 0.00 44.86 4.34
9172 12519 3.813166 AGTTAACCTTGTGTCCAATGACG 59.187 43.478 0.88 0.00 44.86 4.35
9173 12520 5.519722 CAAGTTAACCTTGTGTCCAATGAC 58.480 41.667 0.88 0.00 44.64 3.06
9174 12521 5.766150 CAAGTTAACCTTGTGTCCAATGA 57.234 39.130 0.88 0.00 44.64 2.57
9185 12532 5.048846 TCAAAGAGGAGCAAGTTAACCTT 57.951 39.130 0.88 0.00 32.53 3.50
9186 12533 4.706842 TCAAAGAGGAGCAAGTTAACCT 57.293 40.909 0.88 0.00 35.29 3.50
9187 12534 4.319549 CGTTCAAAGAGGAGCAAGTTAACC 60.320 45.833 0.88 0.00 0.00 2.85
9188 12535 4.319549 CCGTTCAAAGAGGAGCAAGTTAAC 60.320 45.833 0.00 0.00 0.00 2.01
9189 12536 3.813166 CCGTTCAAAGAGGAGCAAGTTAA 59.187 43.478 0.00 0.00 0.00 2.01
9190 12537 3.181458 ACCGTTCAAAGAGGAGCAAGTTA 60.181 43.478 0.00 0.00 0.00 2.24
9191 12538 2.222027 CCGTTCAAAGAGGAGCAAGTT 58.778 47.619 0.00 0.00 0.00 2.66
9192 12539 1.141053 ACCGTTCAAAGAGGAGCAAGT 59.859 47.619 0.00 0.00 0.00 3.16
9193 12540 1.801178 GACCGTTCAAAGAGGAGCAAG 59.199 52.381 0.00 0.00 0.00 4.01
9194 12541 1.140052 TGACCGTTCAAAGAGGAGCAA 59.860 47.619 0.00 0.00 0.00 3.91
9195 12542 0.756294 TGACCGTTCAAAGAGGAGCA 59.244 50.000 0.00 0.00 0.00 4.26
9196 12543 1.149148 GTGACCGTTCAAAGAGGAGC 58.851 55.000 0.00 0.00 31.90 4.70
9197 12544 2.821991 AGTGACCGTTCAAAGAGGAG 57.178 50.000 0.00 0.00 31.90 3.69
9198 12545 3.553828 AAAGTGACCGTTCAAAGAGGA 57.446 42.857 0.00 0.00 31.90 3.71
9199 12546 4.632538 AAAAAGTGACCGTTCAAAGAGG 57.367 40.909 0.00 0.00 31.90 3.69
9200 12547 6.114221 TGTAAAAAGTGACCGTTCAAAGAG 57.886 37.500 0.00 0.00 31.90 2.85
9201 12548 6.687081 ATGTAAAAAGTGACCGTTCAAAGA 57.313 33.333 0.00 0.00 31.90 2.52
9202 12549 8.286800 TCATATGTAAAAAGTGACCGTTCAAAG 58.713 33.333 1.90 0.00 31.90 2.77
9203 12550 8.155821 TCATATGTAAAAAGTGACCGTTCAAA 57.844 30.769 1.90 0.00 31.90 2.69
9204 12551 7.658167 TCTCATATGTAAAAAGTGACCGTTCAA 59.342 33.333 1.90 0.00 31.90 2.69
9205 12552 7.117236 GTCTCATATGTAAAAAGTGACCGTTCA 59.883 37.037 1.90 0.00 0.00 3.18
9206 12553 7.117236 TGTCTCATATGTAAAAAGTGACCGTTC 59.883 37.037 1.90 0.00 0.00 3.95
9207 12554 6.932400 TGTCTCATATGTAAAAAGTGACCGTT 59.068 34.615 1.90 0.00 0.00 4.44
9208 12555 6.460781 TGTCTCATATGTAAAAAGTGACCGT 58.539 36.000 1.90 0.00 0.00 4.83
9209 12556 6.961359 TGTCTCATATGTAAAAAGTGACCG 57.039 37.500 1.90 0.00 0.00 4.79
9210 12557 7.679638 GCCATGTCTCATATGTAAAAAGTGACC 60.680 40.741 1.90 0.00 0.00 4.02
9211 12558 7.189512 GCCATGTCTCATATGTAAAAAGTGAC 58.810 38.462 1.90 0.00 0.00 3.67
9212 12559 6.318648 GGCCATGTCTCATATGTAAAAAGTGA 59.681 38.462 0.00 0.00 0.00 3.41
9213 12560 6.095300 TGGCCATGTCTCATATGTAAAAAGTG 59.905 38.462 0.00 0.00 0.00 3.16
9214 12561 6.095440 GTGGCCATGTCTCATATGTAAAAAGT 59.905 38.462 9.72 0.00 0.00 2.66
9215 12562 6.319658 AGTGGCCATGTCTCATATGTAAAAAG 59.680 38.462 9.72 0.00 0.00 2.27
9216 12563 6.186957 AGTGGCCATGTCTCATATGTAAAAA 58.813 36.000 9.72 0.00 0.00 1.94
9217 12564 5.754782 AGTGGCCATGTCTCATATGTAAAA 58.245 37.500 9.72 0.00 0.00 1.52
9218 12565 5.372343 AGTGGCCATGTCTCATATGTAAA 57.628 39.130 9.72 0.00 0.00 2.01
9219 12566 5.221641 GGTAGTGGCCATGTCTCATATGTAA 60.222 44.000 9.72 0.00 0.00 2.41
9220 12567 4.283467 GGTAGTGGCCATGTCTCATATGTA 59.717 45.833 9.72 0.00 0.00 2.29
9221 12568 3.071602 GGTAGTGGCCATGTCTCATATGT 59.928 47.826 9.72 0.00 0.00 2.29
9222 12569 3.326006 AGGTAGTGGCCATGTCTCATATG 59.674 47.826 9.72 0.00 0.00 1.78
9223 12570 3.580458 GAGGTAGTGGCCATGTCTCATAT 59.420 47.826 9.72 0.00 0.00 1.78
9224 12571 2.965831 GAGGTAGTGGCCATGTCTCATA 59.034 50.000 9.72 0.00 0.00 2.15
9225 12572 1.765314 GAGGTAGTGGCCATGTCTCAT 59.235 52.381 9.72 0.00 0.00 2.90
9226 12573 1.195115 GAGGTAGTGGCCATGTCTCA 58.805 55.000 9.72 0.00 0.00 3.27
9227 12574 1.195115 TGAGGTAGTGGCCATGTCTC 58.805 55.000 9.72 14.36 0.00 3.36
9228 12575 1.487976 CATGAGGTAGTGGCCATGTCT 59.512 52.381 9.72 3.65 33.62 3.41
9229 12576 1.959042 CATGAGGTAGTGGCCATGTC 58.041 55.000 9.72 1.62 33.62 3.06
9230 12577 0.107017 GCATGAGGTAGTGGCCATGT 60.107 55.000 9.72 1.31 38.78 3.21
9231 12578 0.107066 TGCATGAGGTAGTGGCCATG 60.107 55.000 9.72 0.43 39.35 3.66
9232 12579 0.848735 ATGCATGAGGTAGTGGCCAT 59.151 50.000 9.72 0.00 0.00 4.40
9233 12580 0.107066 CATGCATGAGGTAGTGGCCA 60.107 55.000 22.59 0.00 0.00 5.36
9234 12581 0.820891 CCATGCATGAGGTAGTGGCC 60.821 60.000 28.31 0.00 0.00 5.36
9235 12582 0.181114 TCCATGCATGAGGTAGTGGC 59.819 55.000 28.31 0.00 0.00 5.01
9236 12583 1.475751 GGTCCATGCATGAGGTAGTGG 60.476 57.143 28.31 10.43 0.00 4.00
9237 12584 1.487976 AGGTCCATGCATGAGGTAGTG 59.512 52.381 28.31 9.32 0.00 2.74
9238 12585 1.885049 AGGTCCATGCATGAGGTAGT 58.115 50.000 28.31 4.43 0.00 2.73
9239 12586 3.287867 AAAGGTCCATGCATGAGGTAG 57.712 47.619 28.31 10.81 0.00 3.18
9240 12587 3.737559 AAAAGGTCCATGCATGAGGTA 57.262 42.857 28.31 7.53 0.00 3.08
9241 12588 2.610438 AAAAGGTCCATGCATGAGGT 57.390 45.000 28.31 6.62 0.00 3.85
9242 12589 3.355378 TGTAAAAGGTCCATGCATGAGG 58.645 45.455 28.31 12.64 0.00 3.86
9243 12590 4.400251 ACATGTAAAAGGTCCATGCATGAG 59.600 41.667 28.31 17.31 38.82 2.90
9244 12591 4.158209 CACATGTAAAAGGTCCATGCATGA 59.842 41.667 28.31 11.26 38.82 3.07
9245 12592 4.158209 TCACATGTAAAAGGTCCATGCATG 59.842 41.667 20.19 20.19 41.21 4.06
9246 12593 4.343231 TCACATGTAAAAGGTCCATGCAT 58.657 39.130 0.00 0.00 39.62 3.96
9247 12594 3.758023 CTCACATGTAAAAGGTCCATGCA 59.242 43.478 0.00 0.00 39.62 3.96
9248 12595 4.009675 TCTCACATGTAAAAGGTCCATGC 58.990 43.478 0.00 0.00 39.62 4.06
9249 12596 5.003160 TGTCTCACATGTAAAAGGTCCATG 58.997 41.667 0.00 0.00 41.31 3.66
9250 12597 5.241403 TGTCTCACATGTAAAAGGTCCAT 57.759 39.130 0.00 0.00 0.00 3.41
9251 12598 4.698201 TGTCTCACATGTAAAAGGTCCA 57.302 40.909 0.00 0.00 0.00 4.02
9263 12610 1.210478 GGTAGTGGCCATGTCTCACAT 59.790 52.381 9.72 0.00 39.91 3.21
9264 12611 0.613260 GGTAGTGGCCATGTCTCACA 59.387 55.000 9.72 0.00 34.17 3.58
9265 12612 0.905357 AGGTAGTGGCCATGTCTCAC 59.095 55.000 9.72 0.51 0.00 3.51
9266 12613 1.195115 GAGGTAGTGGCCATGTCTCA 58.805 55.000 9.72 0.00 0.00 3.27
9267 12614 1.195115 TGAGGTAGTGGCCATGTCTC 58.805 55.000 9.72 14.36 0.00 3.36
9268 12615 1.487976 CATGAGGTAGTGGCCATGTCT 59.512 52.381 9.72 3.65 33.62 3.41
9269 12616 1.959042 CATGAGGTAGTGGCCATGTC 58.041 55.000 9.72 1.62 33.62 3.06
9270 12617 0.107017 GCATGAGGTAGTGGCCATGT 60.107 55.000 9.72 1.31 38.78 3.21
9271 12618 0.107066 TGCATGAGGTAGTGGCCATG 60.107 55.000 9.72 0.43 39.35 3.66
9272 12619 0.848735 ATGCATGAGGTAGTGGCCAT 59.151 50.000 9.72 0.00 0.00 4.40
9273 12620 0.107066 CATGCATGAGGTAGTGGCCA 60.107 55.000 22.59 0.00 0.00 5.36
9274 12621 0.820891 CCATGCATGAGGTAGTGGCC 60.821 60.000 28.31 0.00 0.00 5.36
9275 12622 0.181114 TCCATGCATGAGGTAGTGGC 59.819 55.000 28.31 0.00 0.00 5.01
9276 12623 1.475751 GGTCCATGCATGAGGTAGTGG 60.476 57.143 28.31 10.43 0.00 4.00
9277 12624 1.487976 AGGTCCATGCATGAGGTAGTG 59.512 52.381 28.31 9.32 0.00 2.74
9278 12625 1.885049 AGGTCCATGCATGAGGTAGT 58.115 50.000 28.31 4.43 0.00 2.73
9279 12626 2.092753 ACAAGGTCCATGCATGAGGTAG 60.093 50.000 28.31 14.45 0.00 3.18
9280 12627 1.915489 ACAAGGTCCATGCATGAGGTA 59.085 47.619 28.31 7.53 0.00 3.08
9281 12628 0.700564 ACAAGGTCCATGCATGAGGT 59.299 50.000 28.31 12.57 0.00 3.85
9282 12629 1.100510 CACAAGGTCCATGCATGAGG 58.899 55.000 28.31 12.64 0.00 3.86
9283 12630 1.830279 ACACAAGGTCCATGCATGAG 58.170 50.000 28.31 17.31 0.00 2.90
9284 12631 3.650281 ATACACAAGGTCCATGCATGA 57.350 42.857 28.31 11.26 0.00 3.07
9285 12632 4.454678 AGTATACACAAGGTCCATGCATG 58.545 43.478 20.19 20.19 0.00 4.06
9286 12633 4.164030 TGAGTATACACAAGGTCCATGCAT 59.836 41.667 5.50 0.00 0.00 3.96
9287 12634 3.517500 TGAGTATACACAAGGTCCATGCA 59.482 43.478 5.50 0.00 0.00 3.96
9288 12635 4.122776 CTGAGTATACACAAGGTCCATGC 58.877 47.826 5.50 0.00 0.00 4.06
9289 12636 4.697514 CCTGAGTATACACAAGGTCCATG 58.302 47.826 5.50 0.00 0.00 3.66
9290 12637 3.134804 GCCTGAGTATACACAAGGTCCAT 59.865 47.826 15.80 0.00 34.68 3.41
9291 12638 2.500098 GCCTGAGTATACACAAGGTCCA 59.500 50.000 15.80 0.00 34.68 4.02
9292 12639 2.500098 TGCCTGAGTATACACAAGGTCC 59.500 50.000 15.80 5.38 34.68 4.46
9293 12640 3.056107 TGTGCCTGAGTATACACAAGGTC 60.056 47.826 15.80 10.71 39.91 3.85
9294 12641 2.903784 TGTGCCTGAGTATACACAAGGT 59.096 45.455 15.80 0.00 39.91 3.50
9295 12642 3.525537 CTGTGCCTGAGTATACACAAGG 58.474 50.000 5.50 9.52 42.07 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.