Multiple sequence alignment - TraesCS6D01G164200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G164200 chr6D 100.000 5109 0 0 1 5109 143396096 143401204 0.000000e+00 9435
1 TraesCS6D01G164200 chr6B 92.878 2696 137 23 255 2910 255263773 255266453 0.000000e+00 3864
2 TraesCS6D01G164200 chr6B 94.070 1602 73 11 2908 4503 255266612 255268197 0.000000e+00 2412
3 TraesCS6D01G164200 chr6B 91.304 115 4 2 5001 5109 255268775 255268889 8.860000e-33 152
4 TraesCS6D01G164200 chr6B 85.401 137 6 6 4876 5006 255268617 255268745 4.150000e-26 130
5 TraesCS6D01G164200 chr6A 93.304 1792 85 22 2727 4503 205107006 205105235 0.000000e+00 2612
6 TraesCS6D01G164200 chr6A 93.526 1174 44 10 1195 2348 205109018 205107857 0.000000e+00 1718
7 TraesCS6D01G164200 chr6A 96.883 385 12 0 2344 2728 205107600 205107216 0.000000e+00 645
8 TraesCS6D01G164200 chr6A 92.708 384 24 4 255 637 205110107 205109727 7.480000e-153 551
9 TraesCS6D01G164200 chr6A 92.574 202 13 1 1 202 22038791 22038990 6.470000e-74 289
10 TraesCS6D01G164200 chr6A 91.133 203 16 1 1 203 531100260 531100060 1.810000e-69 274
11 TraesCS6D01G164200 chr6A 86.758 219 20 5 909 1119 205109291 205109074 8.550000e-58 235
12 TraesCS6D01G164200 chr6A 82.778 180 8 9 4833 5006 205104801 205104639 6.900000e-29 139
13 TraesCS6D01G164200 chr2A 93.069 202 12 1 1 202 778370077 778369878 1.390000e-75 294
14 TraesCS6D01G164200 chr7B 91.584 202 13 2 1 202 718078681 718078878 5.040000e-70 276
15 TraesCS6D01G164200 chr7B 91.129 124 8 2 78 200 22539334 22539213 1.140000e-36 165
16 TraesCS6D01G164200 chr7B 91.250 80 5 1 1 80 22539798 22539721 1.950000e-19 108
17 TraesCS6D01G164200 chr7A 91.626 203 12 4 1 202 80325820 80325622 5.040000e-70 276
18 TraesCS6D01G164200 chr5D 85.572 201 23 2 2 202 533113096 533113290 6.710000e-49 206
19 TraesCS6D01G164200 chr5A 92.623 122 7 1 1 122 456478047 456478166 1.890000e-39 174
20 TraesCS6D01G164200 chr5A 92.105 114 4 2 90 203 231064232 231064124 6.850000e-34 156
21 TraesCS6D01G164200 chr3A 92.593 108 6 1 18 125 20201309 20201204 2.460000e-33 154
22 TraesCS6D01G164200 chr2B 87.619 105 10 3 109 211 31071389 31071492 8.990000e-23 119


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G164200 chr6D 143396096 143401204 5108 False 9435.000000 9435 100.000000 1 5109 1 chr6D.!!$F1 5108
1 TraesCS6D01G164200 chr6B 255263773 255268889 5116 False 1639.500000 3864 90.913250 255 5109 4 chr6B.!!$F1 4854
2 TraesCS6D01G164200 chr6A 205104639 205110107 5468 True 983.333333 2612 90.992833 255 5006 6 chr6A.!!$R2 4751

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.250727 TCCCTGCCGCTTAATATGCC 60.251 55.000 0.00 0.00 0.00 4.40 F
86 87 0.250901 CCCTGCCGCTTAATATGCCT 60.251 55.000 0.00 0.00 0.00 4.75 F
1124 1314 0.187361 TCCTCAGGTGGGGTTTTTGG 59.813 55.000 0.00 0.00 0.00 3.28 F
1499 1701 0.034863 TTGCGGGGGAATAGTTGGAC 60.035 55.000 0.00 0.00 0.00 4.02 F
1644 1846 0.656259 CATGGCGCATCTTCTCACTG 59.344 55.000 10.83 0.00 0.00 3.66 F
1647 1849 1.270785 TGGCGCATCTTCTCACTGAAA 60.271 47.619 10.83 0.00 33.79 2.69 F
3535 4392 0.884704 ATTTCCAAGCACGTGTCGCT 60.885 50.000 18.38 5.06 42.98 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1124 1314 0.037160 TACGACTTCCCCCAAAAGGC 59.963 55.000 0.00 0.0 0.00 4.35 R
1499 1701 0.097674 GCCGCAATGTTAGCACTCTG 59.902 55.000 0.00 0.0 0.00 3.35 R
2017 2237 1.269257 GCACTTTCAAAGAGTGTGGGC 60.269 52.381 3.49 0.0 44.88 5.36 R
2500 2984 1.682702 GTGACACATGATGGGGCATCA 60.683 52.381 6.46 0.0 43.19 3.07 R
3529 4386 0.871722 CAAACCCGAAATCAGCGACA 59.128 50.000 0.00 0.0 0.00 4.35 R
3601 4458 3.204418 GGCGCTAGGTAACCGAGT 58.796 61.111 7.64 0.0 37.17 4.18 R
4694 5590 0.250467 GTCTGGCAAGCTCTGGACAA 60.250 55.000 0.00 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.773864 TCATCAAGTGTGTAACGAACTTTAA 57.226 32.000 0.00 0.00 42.39 1.52
25 26 8.199176 TCATCAAGTGTGTAACGAACTTTAAA 57.801 30.769 0.00 0.00 42.39 1.52
26 27 8.832521 TCATCAAGTGTGTAACGAACTTTAAAT 58.167 29.630 0.00 0.00 42.39 1.40
27 28 9.445786 CATCAAGTGTGTAACGAACTTTAAATT 57.554 29.630 0.00 0.00 42.39 1.82
29 30 9.843334 TCAAGTGTGTAACGAACTTTAAATTTT 57.157 25.926 0.00 0.00 42.39 1.82
30 31 9.879973 CAAGTGTGTAACGAACTTTAAATTTTG 57.120 29.630 0.00 4.43 42.39 2.44
31 32 9.628746 AAGTGTGTAACGAACTTTAAATTTTGT 57.371 25.926 5.56 5.56 42.39 2.83
32 33 9.628746 AGTGTGTAACGAACTTTAAATTTTGTT 57.371 25.926 21.07 21.07 42.39 2.83
33 34 9.875660 GTGTGTAACGAACTTTAAATTTTGTTC 57.124 29.630 20.98 14.43 42.39 3.18
34 35 9.074443 TGTGTAACGAACTTTAAATTTTGTTCC 57.926 29.630 20.98 13.90 42.39 3.62
35 36 9.292846 GTGTAACGAACTTTAAATTTTGTTCCT 57.707 29.630 20.98 6.81 36.43 3.36
36 37 9.291664 TGTAACGAACTTTAAATTTTGTTCCTG 57.708 29.630 20.98 8.44 36.43 3.86
37 38 9.505995 GTAACGAACTTTAAATTTTGTTCCTGA 57.494 29.630 20.98 7.13 36.43 3.86
39 40 8.574196 ACGAACTTTAAATTTTGTTCCTGATG 57.426 30.769 17.65 10.63 36.43 3.07
40 41 8.410141 ACGAACTTTAAATTTTGTTCCTGATGA 58.590 29.630 17.65 0.00 36.43 2.92
41 42 9.410556 CGAACTTTAAATTTTGTTCCTGATGAT 57.589 29.630 17.65 0.00 36.43 2.45
49 50 9.649167 AAATTTTGTTCCTGATGATCTCAAATC 57.351 29.630 0.00 0.00 32.14 2.17
50 51 6.764308 TTTGTTCCTGATGATCTCAAATCC 57.236 37.500 0.00 0.00 32.14 3.01
51 52 4.785301 TGTTCCTGATGATCTCAAATCCC 58.215 43.478 0.00 0.00 32.14 3.85
52 53 4.476113 TGTTCCTGATGATCTCAAATCCCT 59.524 41.667 0.00 0.00 32.14 4.20
53 54 4.701651 TCCTGATGATCTCAAATCCCTG 57.298 45.455 0.00 0.00 32.14 4.45
54 55 3.393609 TCCTGATGATCTCAAATCCCTGG 59.606 47.826 0.00 0.00 32.14 4.45
55 56 3.137913 CCTGATGATCTCAAATCCCTGGT 59.862 47.826 0.00 0.00 32.14 4.00
56 57 4.386088 CCTGATGATCTCAAATCCCTGGTT 60.386 45.833 0.00 0.00 32.14 3.67
57 58 5.197224 TGATGATCTCAAATCCCTGGTTT 57.803 39.130 0.00 0.00 0.00 3.27
58 59 5.195940 TGATGATCTCAAATCCCTGGTTTC 58.804 41.667 0.00 0.00 0.00 2.78
59 60 4.934797 TGATCTCAAATCCCTGGTTTCT 57.065 40.909 0.00 0.00 0.00 2.52
60 61 4.848357 TGATCTCAAATCCCTGGTTTCTC 58.152 43.478 0.00 0.00 0.00 2.87
61 62 3.721087 TCTCAAATCCCTGGTTTCTCC 57.279 47.619 0.00 0.00 0.00 3.71
62 63 3.260205 TCTCAAATCCCTGGTTTCTCCT 58.740 45.455 0.00 0.00 37.07 3.69
63 64 3.009473 TCTCAAATCCCTGGTTTCTCCTG 59.991 47.826 0.00 0.00 37.07 3.86
68 69 1.301293 CCTGGTTTCTCCTGGCTCC 59.699 63.158 0.00 0.00 45.83 4.70
69 70 1.301293 CTGGTTTCTCCTGGCTCCC 59.699 63.158 0.00 0.00 37.07 4.30
70 71 1.151810 TGGTTTCTCCTGGCTCCCT 60.152 57.895 0.00 0.00 37.07 4.20
71 72 1.301293 GGTTTCTCCTGGCTCCCTG 59.699 63.158 0.00 0.00 0.00 4.45
72 73 1.377856 GTTTCTCCTGGCTCCCTGC 60.378 63.158 0.00 0.00 41.94 4.85
82 83 3.633361 GCTCCCTGCCGCTTAATAT 57.367 52.632 0.00 0.00 35.15 1.28
83 84 1.160137 GCTCCCTGCCGCTTAATATG 58.840 55.000 0.00 0.00 35.15 1.78
84 85 1.160137 CTCCCTGCCGCTTAATATGC 58.840 55.000 0.00 0.00 0.00 3.14
85 86 0.250727 TCCCTGCCGCTTAATATGCC 60.251 55.000 0.00 0.00 0.00 4.40
86 87 0.250901 CCCTGCCGCTTAATATGCCT 60.251 55.000 0.00 0.00 0.00 4.75
87 88 1.003118 CCCTGCCGCTTAATATGCCTA 59.997 52.381 0.00 0.00 0.00 3.93
88 89 2.356125 CCCTGCCGCTTAATATGCCTAT 60.356 50.000 0.00 0.00 0.00 2.57
89 90 3.347216 CCTGCCGCTTAATATGCCTATT 58.653 45.455 0.00 0.00 0.00 1.73
90 91 4.513442 CCTGCCGCTTAATATGCCTATTA 58.487 43.478 0.00 0.00 0.00 0.98
91 92 5.126067 CCTGCCGCTTAATATGCCTATTAT 58.874 41.667 2.75 0.00 31.49 1.28
92 93 5.008019 CCTGCCGCTTAATATGCCTATTATG 59.992 44.000 2.75 6.36 31.49 1.90
93 94 4.335315 TGCCGCTTAATATGCCTATTATGC 59.665 41.667 20.36 20.36 42.22 3.14
94 95 4.335315 GCCGCTTAATATGCCTATTATGCA 59.665 41.667 25.32 0.00 43.94 3.96
95 96 5.163663 GCCGCTTAATATGCCTATTATGCAA 60.164 40.000 25.32 7.19 43.94 4.08
96 97 6.460123 GCCGCTTAATATGCCTATTATGCAAT 60.460 38.462 25.32 0.00 43.94 3.56
97 98 7.255104 GCCGCTTAATATGCCTATTATGCAATA 60.255 37.037 25.32 5.13 43.94 1.90
98 99 8.620416 CCGCTTAATATGCCTATTATGCAATAA 58.380 33.333 25.32 5.91 43.94 1.40
99 100 9.438291 CGCTTAATATGCCTATTATGCAATAAC 57.562 33.333 25.32 8.05 42.43 1.89
104 105 5.437289 TGCCTATTATGCAATAACACTGC 57.563 39.130 0.00 0.00 42.43 4.40
133 134 9.916360 ATACTATAAAAAGTAAAGTGGAAGGGG 57.084 33.333 0.00 0.00 35.65 4.79
134 135 5.995565 ATAAAAAGTAAAGTGGAAGGGGC 57.004 39.130 0.00 0.00 0.00 5.80
135 136 1.905637 AAAGTAAAGTGGAAGGGGCG 58.094 50.000 0.00 0.00 0.00 6.13
136 137 0.608308 AAGTAAAGTGGAAGGGGCGC 60.608 55.000 0.00 0.00 0.00 6.53
137 138 2.044555 GTAAAGTGGAAGGGGCGCC 61.045 63.158 21.18 21.18 0.00 6.53
138 139 2.228480 TAAAGTGGAAGGGGCGCCT 61.228 57.895 28.56 18.22 0.00 5.52
139 140 2.193087 TAAAGTGGAAGGGGCGCCTC 62.193 60.000 28.56 25.59 0.00 4.70
141 142 4.475135 GTGGAAGGGGCGCCTCTC 62.475 72.222 33.24 22.48 0.00 3.20
143 144 4.475135 GGAAGGGGCGCCTCTCAC 62.475 72.222 33.24 25.71 0.00 3.51
144 145 3.394836 GAAGGGGCGCCTCTCACT 61.395 66.667 33.24 15.67 0.00 3.41
145 146 2.930562 AAGGGGCGCCTCTCACTT 60.931 61.111 33.24 20.34 0.00 3.16
146 147 3.259633 AAGGGGCGCCTCTCACTTG 62.260 63.158 33.24 0.00 0.00 3.16
147 148 3.706373 GGGGCGCCTCTCACTTGA 61.706 66.667 28.56 0.00 0.00 3.02
148 149 2.435059 GGGCGCCTCTCACTTGAC 60.435 66.667 28.56 0.41 0.00 3.18
149 150 2.343758 GGCGCCTCTCACTTGACA 59.656 61.111 22.15 0.00 0.00 3.58
150 151 2.029844 GGCGCCTCTCACTTGACAC 61.030 63.158 22.15 0.00 0.00 3.67
151 152 2.029844 GCGCCTCTCACTTGACACC 61.030 63.158 0.00 0.00 0.00 4.16
152 153 1.734477 CGCCTCTCACTTGACACCG 60.734 63.158 0.00 0.00 0.00 4.94
153 154 2.029844 GCCTCTCACTTGACACCGC 61.030 63.158 0.00 0.00 0.00 5.68
154 155 1.374758 CCTCTCACTTGACACCGCC 60.375 63.158 0.00 0.00 0.00 6.13
155 156 1.374758 CTCTCACTTGACACCGCCC 60.375 63.158 0.00 0.00 0.00 6.13
156 157 2.099652 CTCTCACTTGACACCGCCCA 62.100 60.000 0.00 0.00 0.00 5.36
157 158 1.669115 CTCACTTGACACCGCCCAG 60.669 63.158 0.00 0.00 0.00 4.45
158 159 3.357079 CACTTGACACCGCCCAGC 61.357 66.667 0.00 0.00 0.00 4.85
159 160 3.560251 ACTTGACACCGCCCAGCT 61.560 61.111 0.00 0.00 0.00 4.24
160 161 2.281761 CTTGACACCGCCCAGCTT 60.282 61.111 0.00 0.00 0.00 3.74
161 162 2.281484 TTGACACCGCCCAGCTTC 60.281 61.111 0.00 0.00 0.00 3.86
162 163 3.842925 TTGACACCGCCCAGCTTCC 62.843 63.158 0.00 0.00 0.00 3.46
163 164 4.021925 GACACCGCCCAGCTTCCT 62.022 66.667 0.00 0.00 0.00 3.36
164 165 3.959991 GACACCGCCCAGCTTCCTC 62.960 68.421 0.00 0.00 0.00 3.71
165 166 3.710722 CACCGCCCAGCTTCCTCT 61.711 66.667 0.00 0.00 0.00 3.69
166 167 3.394836 ACCGCCCAGCTTCCTCTC 61.395 66.667 0.00 0.00 0.00 3.20
167 168 3.393970 CCGCCCAGCTTCCTCTCA 61.394 66.667 0.00 0.00 0.00 3.27
168 169 2.186384 CGCCCAGCTTCCTCTCAG 59.814 66.667 0.00 0.00 0.00 3.35
169 170 2.588989 GCCCAGCTTCCTCTCAGG 59.411 66.667 0.00 0.00 36.46 3.86
170 171 2.588989 CCCAGCTTCCTCTCAGGC 59.411 66.667 0.00 0.00 34.61 4.85
171 172 2.186384 CCAGCTTCCTCTCAGGCG 59.814 66.667 0.00 0.00 34.61 5.52
172 173 2.186384 CAGCTTCCTCTCAGGCGG 59.814 66.667 0.00 0.00 34.61 6.13
173 174 3.780173 AGCTTCCTCTCAGGCGGC 61.780 66.667 0.00 0.00 34.61 6.53
200 201 4.028490 TGGCGCCCCAACCACTAG 62.028 66.667 26.77 0.00 38.46 2.57
201 202 4.029809 GGCGCCCCAACCACTAGT 62.030 66.667 18.11 0.00 0.00 2.57
202 203 2.662070 GGCGCCCCAACCACTAGTA 61.662 63.158 18.11 0.00 0.00 1.82
203 204 1.297364 GCGCCCCAACCACTAGTAA 59.703 57.895 0.00 0.00 0.00 2.24
204 205 1.022982 GCGCCCCAACCACTAGTAAC 61.023 60.000 0.00 0.00 0.00 2.50
205 206 0.322322 CGCCCCAACCACTAGTAACA 59.678 55.000 0.00 0.00 0.00 2.41
206 207 1.065709 CGCCCCAACCACTAGTAACAT 60.066 52.381 0.00 0.00 0.00 2.71
207 208 2.617021 CGCCCCAACCACTAGTAACATT 60.617 50.000 0.00 0.00 0.00 2.71
208 209 3.014623 GCCCCAACCACTAGTAACATTC 58.985 50.000 0.00 0.00 0.00 2.67
209 210 3.560453 GCCCCAACCACTAGTAACATTCA 60.560 47.826 0.00 0.00 0.00 2.57
210 211 4.007659 CCCCAACCACTAGTAACATTCAC 58.992 47.826 0.00 0.00 0.00 3.18
211 212 4.505918 CCCCAACCACTAGTAACATTCACA 60.506 45.833 0.00 0.00 0.00 3.58
212 213 5.067273 CCCAACCACTAGTAACATTCACAA 58.933 41.667 0.00 0.00 0.00 3.33
213 214 5.048991 CCCAACCACTAGTAACATTCACAAC 60.049 44.000 0.00 0.00 0.00 3.32
214 215 5.333798 CCAACCACTAGTAACATTCACAACG 60.334 44.000 0.00 0.00 0.00 4.10
215 216 4.312443 ACCACTAGTAACATTCACAACGG 58.688 43.478 0.00 0.00 0.00 4.44
216 217 4.202284 ACCACTAGTAACATTCACAACGGT 60.202 41.667 0.00 0.00 0.00 4.83
217 218 4.151689 CCACTAGTAACATTCACAACGGTG 59.848 45.833 0.00 0.00 46.66 4.94
218 219 4.748102 CACTAGTAACATTCACAACGGTGT 59.252 41.667 0.00 0.00 45.45 4.16
228 229 2.590575 AACGGTGTGGCGGTTGAG 60.591 61.111 0.00 0.00 38.86 3.02
229 230 4.619227 ACGGTGTGGCGGTTGAGG 62.619 66.667 0.00 0.00 0.00 3.86
234 235 4.752879 GTGGCGGTTGAGGCGCTA 62.753 66.667 7.64 0.00 42.83 4.26
235 236 4.451150 TGGCGGTTGAGGCGCTAG 62.451 66.667 7.64 0.00 39.82 3.42
237 238 4.821589 GCGGTTGAGGCGCTAGCT 62.822 66.667 13.93 0.00 44.37 3.32
238 239 2.583593 CGGTTGAGGCGCTAGCTC 60.584 66.667 13.93 4.27 44.37 4.09
239 240 2.202946 GGTTGAGGCGCTAGCTCC 60.203 66.667 16.24 16.24 44.37 4.70
240 241 2.583593 GTTGAGGCGCTAGCTCCG 60.584 66.667 17.82 0.62 44.37 4.63
241 242 3.838271 TTGAGGCGCTAGCTCCGG 61.838 66.667 17.82 0.00 44.37 5.14
250 251 4.733725 TAGCTCCGGCCCCTGGTT 62.734 66.667 0.00 0.00 39.73 3.67
266 267 0.523335 GGTTCGCGCCAATGAATGTC 60.523 55.000 0.00 0.00 0.00 3.06
290 292 8.936864 GTCTTGCTAAACAATAGTGTAAGATGT 58.063 33.333 8.28 0.00 36.80 3.06
306 308 3.564511 AGATGTAACGCAATTTGCACAC 58.435 40.909 20.56 14.13 45.36 3.82
307 309 2.851805 TGTAACGCAATTTGCACACA 57.148 40.000 20.56 16.24 45.36 3.72
318 320 2.834574 TTGCACACAAAAACGACGAT 57.165 40.000 0.00 0.00 31.21 3.73
407 409 4.020307 CCCCCATTGTTTGCACTTATCTTT 60.020 41.667 0.00 0.00 0.00 2.52
661 664 1.068417 GGTTCAAAACCCGCCAACC 59.932 57.895 0.00 0.00 46.12 3.77
794 797 2.356553 CAACGCCCCGAGAACGAA 60.357 61.111 0.00 0.00 42.66 3.85
811 819 0.823356 GAAAACTCCTGTGCTGCCCA 60.823 55.000 0.00 0.00 0.00 5.36
819 827 0.462225 CTGTGCTGCCCATCTCTCTG 60.462 60.000 0.00 0.00 0.00 3.35
824 832 0.690411 CTGCCCATCTCTCTGTCCCT 60.690 60.000 0.00 0.00 0.00 4.20
825 833 0.689080 TGCCCATCTCTCTGTCCCTC 60.689 60.000 0.00 0.00 0.00 4.30
826 834 0.398381 GCCCATCTCTCTGTCCCTCT 60.398 60.000 0.00 0.00 0.00 3.69
827 835 1.703411 CCCATCTCTCTGTCCCTCTC 58.297 60.000 0.00 0.00 0.00 3.20
828 836 1.703411 CCATCTCTCTGTCCCTCTCC 58.297 60.000 0.00 0.00 0.00 3.71
829 837 1.703411 CATCTCTCTGTCCCTCTCCC 58.297 60.000 0.00 0.00 0.00 4.30
830 838 1.217689 CATCTCTCTGTCCCTCTCCCT 59.782 57.143 0.00 0.00 0.00 4.20
973 1142 2.501316 TGCTGATTTGAGGGAGATTCGA 59.499 45.455 0.00 0.00 0.00 3.71
976 1145 3.107601 TGATTTGAGGGAGATTCGAGGT 58.892 45.455 0.00 0.00 0.00 3.85
977 1146 3.519510 TGATTTGAGGGAGATTCGAGGTT 59.480 43.478 0.00 0.00 0.00 3.50
985 1160 0.970937 AGATTCGAGGTTGGAGCCGA 60.971 55.000 0.00 0.00 0.00 5.54
1104 1283 1.116308 CCGTTTTGGGGAAGTTTGGT 58.884 50.000 0.00 0.00 0.00 3.67
1107 1286 2.482316 CGTTTTGGGGAAGTTTGGTTCC 60.482 50.000 0.00 0.00 44.81 3.62
1112 1291 1.547901 GGGGAAGTTTGGTTCCTCAGG 60.548 57.143 2.79 0.00 45.43 3.86
1117 1296 0.539669 GTTTGGTTCCTCAGGTGGGG 60.540 60.000 0.00 0.00 0.00 4.96
1118 1297 0.996762 TTTGGTTCCTCAGGTGGGGT 60.997 55.000 0.00 0.00 0.00 4.95
1124 1314 0.187361 TCCTCAGGTGGGGTTTTTGG 59.813 55.000 0.00 0.00 0.00 3.28
1138 1328 1.135960 TTTTGGCCTTTTGGGGGAAG 58.864 50.000 3.32 0.00 40.82 3.46
1146 1336 2.423577 CTTTTGGGGGAAGTCGTACAG 58.576 52.381 0.00 0.00 0.00 2.74
1149 1339 1.079336 GGGGGAAGTCGTACAGCAC 60.079 63.158 0.00 0.00 0.00 4.40
1162 1352 1.512926 ACAGCACGATTGTTCCAGTC 58.487 50.000 0.00 0.00 0.00 3.51
1176 1366 4.202357 TGTTCCAGTCTTATCTGCTGTTGT 60.202 41.667 0.00 0.00 34.47 3.32
1177 1367 4.193826 TCCAGTCTTATCTGCTGTTGTC 57.806 45.455 0.00 0.00 34.47 3.18
1210 1409 6.345920 AGGTTGAATTAGCTTACGAATTCG 57.654 37.500 25.64 25.64 45.57 3.34
1290 1489 1.639108 GGGGAAATACTGAGGTTGGGT 59.361 52.381 0.00 0.00 0.00 4.51
1499 1701 0.034863 TTGCGGGGGAATAGTTGGAC 60.035 55.000 0.00 0.00 0.00 4.02
1529 1731 2.112998 ACATTGCGGCCTTACCTAGTA 58.887 47.619 0.00 0.00 35.61 1.82
1644 1846 0.656259 CATGGCGCATCTTCTCACTG 59.344 55.000 10.83 0.00 0.00 3.66
1647 1849 1.270785 TGGCGCATCTTCTCACTGAAA 60.271 47.619 10.83 0.00 33.79 2.69
1872 2090 2.859165 GGACAATGAAGTGGAGTCCA 57.141 50.000 8.12 8.12 46.15 4.02
2017 2237 4.605640 ATGAACAACAATCCAAACTGGG 57.394 40.909 0.00 0.00 38.32 4.45
2041 2261 4.441913 CCCACACTCTTTGAAAGTGCAAAT 60.442 41.667 4.68 0.00 46.48 2.32
2111 2331 9.403583 TCAACTATTGGTTTACTTTTCAAGTCT 57.596 29.630 0.00 0.00 38.27 3.24
2202 2423 4.713814 AGAAGGTCTCATGATCACAAGCTA 59.286 41.667 0.00 0.00 0.00 3.32
2203 2424 4.399004 AGGTCTCATGATCACAAGCTAC 57.601 45.455 0.00 0.00 0.00 3.58
2204 2425 4.029520 AGGTCTCATGATCACAAGCTACT 58.970 43.478 0.00 0.00 0.00 2.57
2500 2984 7.549488 CACGTCTTAGTTTCCTTCCTGATAAAT 59.451 37.037 0.00 0.00 0.00 1.40
2610 3094 6.342111 GGCCATATATCTACCTGCTAGTTTC 58.658 44.000 0.00 0.00 0.00 2.78
2651 3135 8.391075 AGTGCATAACTAAAAACTGCTAGAAA 57.609 30.769 0.00 0.00 37.36 2.52
2658 3142 6.068670 ACTAAAAACTGCTAGAAACCCACAT 58.931 36.000 0.00 0.00 0.00 3.21
2706 3190 8.894592 AGAATCCTATGAGCATATTAAAGGGAA 58.105 33.333 0.00 0.00 0.00 3.97
2963 3820 6.295039 TCGCCAGAAGTTTTAAGTTGTTAG 57.705 37.500 0.00 0.00 0.00 2.34
3042 3899 7.315142 TCCATGTAAAGTCAAGAAATTGCATC 58.685 34.615 0.00 0.00 0.00 3.91
3052 3909 8.810041 AGTCAAGAAATTGCATCTTAATTCCTT 58.190 29.630 0.83 0.00 35.43 3.36
3057 3914 6.475596 AATTGCATCTTAATTCCTTCCCAG 57.524 37.500 0.00 0.00 0.00 4.45
3069 3926 1.559682 CCTTCCCAGCCTAGTTAGCAA 59.440 52.381 0.00 0.00 0.00 3.91
3089 3946 4.622740 GCAACTCAACTGTTTATTCCATGC 59.377 41.667 0.00 0.00 0.00 4.06
3199 4056 2.613133 GCATAAGAGCCTCTTGAGCTTG 59.387 50.000 17.22 7.75 41.75 4.01
3529 4386 1.206578 CGCGAATTTCCAAGCACGT 59.793 52.632 0.00 0.00 0.00 4.49
3535 4392 0.884704 ATTTCCAAGCACGTGTCGCT 60.885 50.000 18.38 5.06 42.98 4.93
3613 4470 1.636148 AAGGCACACTCGGTTACCTA 58.364 50.000 0.00 0.00 33.33 3.08
3628 4485 2.049063 CTAGCGCCGGAGTATGCC 60.049 66.667 5.05 0.00 0.00 4.40
3658 4515 2.394563 GGCCAAAGAGAGCTGCGAC 61.395 63.158 0.00 0.00 0.00 5.19
3748 4605 1.070758 ACGACAAAGCTCACCATCACT 59.929 47.619 0.00 0.00 0.00 3.41
3901 4758 1.194781 AACAGAGGCCGGTGATGTCT 61.195 55.000 13.77 0.00 0.00 3.41
3904 4761 0.904865 AGAGGCCGGTGATGTCTGAA 60.905 55.000 1.90 0.00 0.00 3.02
3945 4802 2.355209 GGGAATCTGCCGAGAAGTTCTT 60.355 50.000 6.88 0.00 0.00 2.52
3946 4803 3.339141 GGAATCTGCCGAGAAGTTCTTT 58.661 45.455 6.88 0.00 0.00 2.52
3982 4839 2.087646 GATCTGTTCAAGCCTCAACCC 58.912 52.381 0.00 0.00 0.00 4.11
4111 4971 0.041238 TGCCCTCAGCTAGGTAGTGT 59.959 55.000 0.00 0.00 44.90 3.55
4112 4972 1.196012 GCCCTCAGCTAGGTAGTGTT 58.804 55.000 0.00 0.00 44.90 3.32
4113 4973 2.291996 TGCCCTCAGCTAGGTAGTGTTA 60.292 50.000 0.00 0.00 44.90 2.41
4162 5024 4.780815 TCCTGGGATATGTGATTTGTGTC 58.219 43.478 0.00 0.00 0.00 3.67
4195 5057 2.966050 TGGTTGTTTCTTGTTGTTGGC 58.034 42.857 0.00 0.00 0.00 4.52
4196 5058 2.300152 TGGTTGTTTCTTGTTGTTGGCA 59.700 40.909 0.00 0.00 0.00 4.92
4206 5068 2.729194 TGTTGTTGGCAGGTTACTTGT 58.271 42.857 0.00 0.00 0.00 3.16
4213 5075 1.328279 GCAGGTTACTTGTGCCCTTT 58.672 50.000 0.00 0.00 0.00 3.11
4223 5085 0.109723 TGTGCCCTTTACCAGTCCAC 59.890 55.000 0.00 0.00 0.00 4.02
4236 5098 3.006967 ACCAGTCCACAGATGTACTTGTC 59.993 47.826 0.00 0.00 0.00 3.18
4237 5099 3.259374 CCAGTCCACAGATGTACTTGTCT 59.741 47.826 0.00 0.00 0.00 3.41
4238 5100 4.240888 CAGTCCACAGATGTACTTGTCTG 58.759 47.826 16.64 16.64 45.65 3.51
4249 5111 0.179056 ACTTGTCTGGGTTCCGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
4251 5113 0.462937 TTGTCTGGGTTCCGTGTGTG 60.463 55.000 0.00 0.00 0.00 3.82
4330 5192 5.209977 GGTTCCGACAATAACAAGTTGTTC 58.790 41.667 24.06 9.34 40.22 3.18
4336 5198 6.072948 CCGACAATAACAAGTTGTTCCATGTA 60.073 38.462 24.06 6.80 40.22 2.29
4386 5248 4.021544 TCAATTATCTGGTGTGCAAAACCC 60.022 41.667 15.44 0.00 46.76 4.11
4391 5253 2.279186 GTGTGCAAAACCCACGGC 60.279 61.111 0.00 0.00 36.01 5.68
4417 5279 4.494199 GCGACTTATACTTGCGCAAAAGAT 60.494 41.667 29.45 21.66 46.19 2.40
4428 5290 4.402583 TGCGCAAAAGATATTTTCACTCG 58.597 39.130 8.16 0.00 0.00 4.18
4429 5291 3.786048 GCGCAAAAGATATTTTCACTCGG 59.214 43.478 0.30 0.00 0.00 4.63
4431 5293 4.142687 CGCAAAAGATATTTTCACTCGGGT 60.143 41.667 0.00 0.00 0.00 5.28
4448 5310 8.210946 TCACTCGGGTAGATTTTATCATGATTT 58.789 33.333 14.65 0.00 0.00 2.17
4450 5312 8.840321 ACTCGGGTAGATTTTATCATGATTTTG 58.160 33.333 14.65 0.00 0.00 2.44
4451 5313 8.746052 TCGGGTAGATTTTATCATGATTTTGT 57.254 30.769 14.65 0.00 0.00 2.83
4452 5314 8.836413 TCGGGTAGATTTTATCATGATTTTGTC 58.164 33.333 14.65 7.95 0.00 3.18
4453 5315 8.620416 CGGGTAGATTTTATCATGATTTTGTCA 58.380 33.333 14.65 0.00 42.06 3.58
4454 5316 9.956720 GGGTAGATTTTATCATGATTTTGTCAG 57.043 33.333 14.65 0.00 40.92 3.51
4480 5353 6.940831 AATGGGAAACAAAAATTGTCCAAG 57.059 33.333 6.32 0.00 44.59 3.61
4488 5361 5.911752 ACAAAAATTGTCCAAGCACACATA 58.088 33.333 0.00 0.00 40.56 2.29
4498 5371 5.874810 GTCCAAGCACACATAGAGAACATAA 59.125 40.000 0.00 0.00 0.00 1.90
4503 5376 7.239166 AGCACACATAGAGAACATAATTTCG 57.761 36.000 0.00 0.00 0.00 3.46
4504 5377 6.818644 AGCACACATAGAGAACATAATTTCGT 59.181 34.615 0.00 0.00 0.00 3.85
4505 5378 7.334421 AGCACACATAGAGAACATAATTTCGTT 59.666 33.333 0.00 0.00 0.00 3.85
4506 5379 8.600625 GCACACATAGAGAACATAATTTCGTTA 58.399 33.333 0.00 0.00 0.00 3.18
4528 5401 8.431020 GTTAAAAACGTCACCATCTTTATGTC 57.569 34.615 0.00 0.00 0.00 3.06
4529 5402 6.627395 AAAAACGTCACCATCTTTATGTCA 57.373 33.333 0.00 0.00 0.00 3.58
4530 5403 6.817765 AAAACGTCACCATCTTTATGTCAT 57.182 33.333 0.00 0.00 0.00 3.06
4531 5404 7.915293 AAAACGTCACCATCTTTATGTCATA 57.085 32.000 0.00 0.00 0.00 2.15
4532 5405 8.506168 AAAACGTCACCATCTTTATGTCATAT 57.494 30.769 0.00 0.00 0.00 1.78
4533 5406 8.506168 AAACGTCACCATCTTTATGTCATATT 57.494 30.769 0.00 0.00 0.00 1.28
4534 5407 7.715265 ACGTCACCATCTTTATGTCATATTC 57.285 36.000 0.00 0.00 0.00 1.75
4535 5408 7.500992 ACGTCACCATCTTTATGTCATATTCT 58.499 34.615 0.00 0.00 0.00 2.40
4536 5409 7.987458 ACGTCACCATCTTTATGTCATATTCTT 59.013 33.333 0.00 0.00 0.00 2.52
4537 5410 8.278408 CGTCACCATCTTTATGTCATATTCTTG 58.722 37.037 0.00 0.00 0.00 3.02
4538 5411 9.330063 GTCACCATCTTTATGTCATATTCTTGA 57.670 33.333 0.00 0.00 0.00 3.02
4539 5412 9.330063 TCACCATCTTTATGTCATATTCTTGAC 57.670 33.333 0.00 0.00 45.05 3.18
4558 5431 8.462143 TCTTGACAAATATAAGAGTTCGTCAC 57.538 34.615 0.00 0.00 32.27 3.67
4566 5439 0.522180 AGAGTTCGTCACAGGCTACG 59.478 55.000 1.94 1.94 40.40 3.51
4572 5445 1.134310 TCGTCACAGGCTACGGATAGA 60.134 52.381 8.31 0.00 39.52 1.98
4579 5452 4.279671 CACAGGCTACGGATAGAATCTCTT 59.720 45.833 0.00 0.00 0.00 2.85
4585 5458 7.558444 AGGCTACGGATAGAATCTCTTAATAGG 59.442 40.741 0.00 0.00 0.00 2.57
4588 5461 7.726033 ACGGATAGAATCTCTTAATAGGCAT 57.274 36.000 0.00 0.00 0.00 4.40
4604 5477 9.796120 TTAATAGGCATGTTTAATACAAACAGC 57.204 29.630 8.37 10.53 42.57 4.40
4606 5479 5.713025 AGGCATGTTTAATACAAACAGCAG 58.287 37.500 17.64 9.30 42.57 4.24
4607 5480 5.476599 AGGCATGTTTAATACAAACAGCAGA 59.523 36.000 17.64 0.00 42.57 4.26
4608 5481 6.015519 AGGCATGTTTAATACAAACAGCAGAA 60.016 34.615 17.64 0.00 42.57 3.02
4613 5486 7.767261 TGTTTAATACAAACAGCAGAAACACT 58.233 30.769 0.00 0.00 35.45 3.55
4615 5488 9.083080 GTTTAATACAAACAGCAGAAACACTTT 57.917 29.630 0.00 0.00 0.00 2.66
4617 5490 9.724839 TTAATACAAACAGCAGAAACACTTTAC 57.275 29.630 0.00 0.00 0.00 2.01
4618 5491 4.993905 ACAAACAGCAGAAACACTTTACC 58.006 39.130 0.00 0.00 0.00 2.85
4620 5493 5.127031 ACAAACAGCAGAAACACTTTACCAT 59.873 36.000 0.00 0.00 0.00 3.55
4621 5494 6.320164 ACAAACAGCAGAAACACTTTACCATA 59.680 34.615 0.00 0.00 0.00 2.74
4622 5495 7.014230 ACAAACAGCAGAAACACTTTACCATAT 59.986 33.333 0.00 0.00 0.00 1.78
4623 5496 8.511321 CAAACAGCAGAAACACTTTACCATATA 58.489 33.333 0.00 0.00 0.00 0.86
4624 5497 8.807948 AACAGCAGAAACACTTTACCATATAT 57.192 30.769 0.00 0.00 0.00 0.86
4625 5498 8.438676 ACAGCAGAAACACTTTACCATATATC 57.561 34.615 0.00 0.00 0.00 1.63
4626 5499 8.046708 ACAGCAGAAACACTTTACCATATATCA 58.953 33.333 0.00 0.00 0.00 2.15
4627 5500 9.060347 CAGCAGAAACACTTTACCATATATCAT 57.940 33.333 0.00 0.00 0.00 2.45
4649 5522 8.964420 TCATTAATTTTGCACTACTGCTTTAC 57.036 30.769 0.00 0.00 44.57 2.01
4650 5523 8.572185 TCATTAATTTTGCACTACTGCTTTACA 58.428 29.630 0.00 0.00 44.57 2.41
4652 5548 9.927668 ATTAATTTTGCACTACTGCTTTACATT 57.072 25.926 0.00 0.00 44.57 2.71
4654 5550 8.661352 AATTTTGCACTACTGCTTTACATTTT 57.339 26.923 0.00 0.00 44.57 1.82
4656 5552 7.692908 TTTGCACTACTGCTTTACATTTTTC 57.307 32.000 0.00 0.00 44.57 2.29
4658 5554 6.437928 TGCACTACTGCTTTACATTTTTCTG 58.562 36.000 0.00 0.00 44.57 3.02
4665 5561 7.687445 ACTGCTTTACATTTTTCTGCTTTTTG 58.313 30.769 0.00 0.00 0.00 2.44
4666 5562 7.334171 ACTGCTTTACATTTTTCTGCTTTTTGT 59.666 29.630 0.00 0.00 0.00 2.83
4668 5564 8.599774 TGCTTTACATTTTTCTGCTTTTTGTAC 58.400 29.630 0.00 0.00 0.00 2.90
4669 5565 8.817100 GCTTTACATTTTTCTGCTTTTTGTACT 58.183 29.630 0.00 0.00 0.00 2.73
4681 5577 9.677567 TCTGCTTTTTGTACTATCAAATTTGTC 57.322 29.630 17.47 4.32 37.20 3.18
4682 5578 9.462174 CTGCTTTTTGTACTATCAAATTTGTCA 57.538 29.630 17.47 6.24 37.20 3.58
4683 5579 9.809096 TGCTTTTTGTACTATCAAATTTGTCAA 57.191 25.926 17.47 11.09 37.20 3.18
4700 5596 8.961294 ATTTGTCAATTCAAAGATTTTGTCCA 57.039 26.923 1.92 0.00 40.00 4.02
4701 5597 8.422973 TTTGTCAATTCAAAGATTTTGTCCAG 57.577 30.769 1.92 0.00 34.02 3.86
4702 5598 7.345422 TGTCAATTCAAAGATTTTGTCCAGA 57.655 32.000 1.92 0.00 0.00 3.86
4703 5599 7.428020 TGTCAATTCAAAGATTTTGTCCAGAG 58.572 34.615 1.92 0.00 0.00 3.35
4704 5600 6.364435 GTCAATTCAAAGATTTTGTCCAGAGC 59.636 38.462 1.92 0.00 0.00 4.09
4705 5601 6.266103 TCAATTCAAAGATTTTGTCCAGAGCT 59.734 34.615 0.00 0.00 0.00 4.09
4706 5602 6.661304 ATTCAAAGATTTTGTCCAGAGCTT 57.339 33.333 0.00 0.00 0.00 3.74
4707 5603 5.443185 TCAAAGATTTTGTCCAGAGCTTG 57.557 39.130 0.00 0.00 0.00 4.01
4708 5604 3.930634 AAGATTTTGTCCAGAGCTTGC 57.069 42.857 0.00 0.00 0.00 4.01
4709 5605 2.165998 AGATTTTGTCCAGAGCTTGCC 58.834 47.619 0.00 0.00 0.00 4.52
4710 5606 1.888512 GATTTTGTCCAGAGCTTGCCA 59.111 47.619 0.00 0.00 0.00 4.92
4711 5607 1.321474 TTTTGTCCAGAGCTTGCCAG 58.679 50.000 0.00 0.00 0.00 4.85
4712 5608 0.473755 TTTGTCCAGAGCTTGCCAGA 59.526 50.000 0.00 0.00 0.00 3.86
4713 5609 0.250467 TTGTCCAGAGCTTGCCAGAC 60.250 55.000 0.00 0.00 0.00 3.51
4714 5610 1.376553 GTCCAGAGCTTGCCAGACC 60.377 63.158 0.00 0.00 0.00 3.85
4720 5616 0.324943 GAGCTTGCCAGACCCTTGTA 59.675 55.000 0.00 0.00 0.00 2.41
4725 5621 3.954258 GCTTGCCAGACCCTTGTATTTAT 59.046 43.478 0.00 0.00 0.00 1.40
4730 5626 5.045213 TGCCAGACCCTTGTATTTATCAAGA 60.045 40.000 7.16 0.00 43.17 3.02
4731 5627 5.885912 GCCAGACCCTTGTATTTATCAAGAA 59.114 40.000 7.16 0.00 43.17 2.52
4733 5629 7.719633 GCCAGACCCTTGTATTTATCAAGAATA 59.280 37.037 7.16 0.00 43.17 1.75
4734 5630 9.627123 CCAGACCCTTGTATTTATCAAGAATAA 57.373 33.333 7.16 0.00 43.17 1.40
4751 5647 9.074576 TCAAGAATAATATAGCGTAGAGGTTCA 57.925 33.333 0.00 0.00 0.00 3.18
4752 5648 9.347934 CAAGAATAATATAGCGTAGAGGTTCAG 57.652 37.037 0.00 0.00 0.00 3.02
4754 5650 6.835819 ATAATATAGCGTAGAGGTTCAGCA 57.164 37.500 0.00 0.00 0.00 4.41
4755 5651 5.730296 AATATAGCGTAGAGGTTCAGCAT 57.270 39.130 0.00 0.00 0.00 3.79
4756 5652 6.835819 AATATAGCGTAGAGGTTCAGCATA 57.164 37.500 0.00 0.00 0.00 3.14
4757 5653 7.411486 AATATAGCGTAGAGGTTCAGCATAT 57.589 36.000 0.00 0.00 0.00 1.78
4761 5657 6.443934 AGCGTAGAGGTTCAGCATATATAG 57.556 41.667 0.00 0.00 0.00 1.31
4762 5658 5.946972 AGCGTAGAGGTTCAGCATATATAGT 59.053 40.000 0.00 0.00 0.00 2.12
4764 5660 7.776030 AGCGTAGAGGTTCAGCATATATAGTAT 59.224 37.037 0.00 0.00 0.00 2.12
4765 5661 8.407064 GCGTAGAGGTTCAGCATATATAGTATT 58.593 37.037 0.00 0.00 0.00 1.89
4792 5688 9.807386 ATATTCGCTACGACTAATTAATTTTGC 57.193 29.630 5.91 0.05 34.89 3.68
4794 5690 6.471839 TCGCTACGACTAATTAATTTTGCAC 58.528 36.000 5.91 0.00 0.00 4.57
4795 5691 6.311935 TCGCTACGACTAATTAATTTTGCACT 59.688 34.615 5.91 0.00 0.00 4.40
4796 5692 7.488792 TCGCTACGACTAATTAATTTTGCACTA 59.511 33.333 5.91 0.00 0.00 2.74
4797 5693 7.787935 CGCTACGACTAATTAATTTTGCACTAG 59.212 37.037 5.91 0.00 0.00 2.57
4799 5695 9.901724 CTACGACTAATTAATTTTGCACTAGTG 57.098 33.333 18.93 18.93 0.00 2.74
4815 5711 4.913924 CACTAGTGCTTCAAATGTTTCTGC 59.086 41.667 10.54 0.00 0.00 4.26
4817 5713 3.973657 AGTGCTTCAAATGTTTCTGCTG 58.026 40.909 0.00 0.00 0.00 4.41
4819 5715 4.114794 GTGCTTCAAATGTTTCTGCTGTT 58.885 39.130 0.00 0.00 0.00 3.16
4821 5717 4.567558 TGCTTCAAATGTTTCTGCTGTTTG 59.432 37.500 0.00 0.00 0.00 2.93
4828 5923 9.462174 TCAAATGTTTCTGCTGTTTGTATTAAG 57.538 29.630 0.00 0.00 32.97 1.85
4829 5924 9.462174 CAAATGTTTCTGCTGTTTGTATTAAGA 57.538 29.630 0.00 0.00 0.00 2.10
4831 5926 9.683069 AATGTTTCTGCTGTTTGTATTAAGAAG 57.317 29.630 0.00 0.00 0.00 2.85
4838 5933 9.478019 CTGCTGTTTGTATTAAGAAGAATAACG 57.522 33.333 0.00 0.00 0.00 3.18
4850 5945 6.525578 AGAAGAATAACGACACATACAGGA 57.474 37.500 0.00 0.00 0.00 3.86
4921 6016 2.733227 GCACATGCTTCACAGTAATGCC 60.733 50.000 0.00 0.00 38.21 4.40
4925 6020 1.009829 GCTTCACAGTAATGCCGGAG 58.990 55.000 5.05 0.00 0.00 4.63
4940 6041 0.460987 CGGAGCATGGAGAGGTGAAC 60.461 60.000 0.00 0.00 0.00 3.18
4942 6043 1.211457 GGAGCATGGAGAGGTGAACAT 59.789 52.381 0.00 0.00 0.00 2.71
4957 6058 2.684374 TGAACATTATGCGCATTCAGCT 59.316 40.909 30.42 10.95 42.61 4.24
4958 6059 3.242837 TGAACATTATGCGCATTCAGCTC 60.243 43.478 30.42 19.16 42.61 4.09
4959 6060 2.291365 ACATTATGCGCATTCAGCTCA 58.709 42.857 30.42 5.25 42.99 4.26
4960 6061 2.032550 ACATTATGCGCATTCAGCTCAC 59.967 45.455 30.42 0.00 41.38 3.51
4961 6062 1.736612 TTATGCGCATTCAGCTCACA 58.263 45.000 30.42 3.49 41.38 3.58
4962 6063 1.009078 TATGCGCATTCAGCTCACAC 58.991 50.000 30.42 0.00 41.38 3.82
4963 6064 1.651240 ATGCGCATTCAGCTCACACC 61.651 55.000 19.28 0.00 41.38 4.16
5042 6179 7.663081 AGGATGAACATTATACATCATCACACC 59.337 37.037 14.42 0.91 46.31 4.16
5086 6228 7.585210 CACAAGCATATATGTTCTCATCAAACG 59.415 37.037 14.14 0.00 35.70 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.773864 TTAAAGTTCGTTACACACTTGATGA 57.226 32.000 0.00 0.00 31.00 2.92
1 2 9.445786 AATTTAAAGTTCGTTACACACTTGATG 57.554 29.630 0.00 0.00 31.00 3.07
3 4 9.843334 AAAATTTAAAGTTCGTTACACACTTGA 57.157 25.926 0.75 0.00 31.00 3.02
4 5 9.879973 CAAAATTTAAAGTTCGTTACACACTTG 57.120 29.630 0.75 0.00 31.00 3.16
5 6 9.628746 ACAAAATTTAAAGTTCGTTACACACTT 57.371 25.926 0.75 0.00 31.90 3.16
6 7 9.628746 AACAAAATTTAAAGTTCGTTACACACT 57.371 25.926 3.05 0.00 0.00 3.55
7 8 9.875660 GAACAAAATTTAAAGTTCGTTACACAC 57.124 29.630 4.82 0.00 32.17 3.82
8 9 9.074443 GGAACAAAATTTAAAGTTCGTTACACA 57.926 29.630 9.06 0.00 40.83 3.72
9 10 9.292846 AGGAACAAAATTTAAAGTTCGTTACAC 57.707 29.630 14.84 5.47 40.83 2.90
10 11 9.291664 CAGGAACAAAATTTAAAGTTCGTTACA 57.708 29.630 14.84 0.00 40.83 2.41
11 12 9.505995 TCAGGAACAAAATTTAAAGTTCGTTAC 57.494 29.630 6.35 6.35 40.83 2.50
13 14 9.030301 CATCAGGAACAAAATTTAAAGTTCGTT 57.970 29.630 16.76 4.51 40.83 3.85
14 15 8.410141 TCATCAGGAACAAAATTTAAAGTTCGT 58.590 29.630 17.54 16.26 40.83 3.85
15 16 8.795786 TCATCAGGAACAAAATTTAAAGTTCG 57.204 30.769 17.54 0.00 40.83 3.95
23 24 9.649167 GATTTGAGATCATCAGGAACAAAATTT 57.351 29.630 0.00 0.00 39.68 1.82
24 25 8.255905 GGATTTGAGATCATCAGGAACAAAATT 58.744 33.333 0.00 0.00 39.68 1.82
25 26 7.147776 GGGATTTGAGATCATCAGGAACAAAAT 60.148 37.037 0.00 0.00 39.68 1.82
26 27 6.153340 GGGATTTGAGATCATCAGGAACAAAA 59.847 38.462 0.00 0.00 39.68 2.44
27 28 5.653769 GGGATTTGAGATCATCAGGAACAAA 59.346 40.000 0.00 0.00 39.68 2.83
28 29 5.044624 AGGGATTTGAGATCATCAGGAACAA 60.045 40.000 0.00 0.00 39.68 2.83
29 30 4.476113 AGGGATTTGAGATCATCAGGAACA 59.524 41.667 0.00 0.00 39.68 3.18
30 31 4.820716 CAGGGATTTGAGATCATCAGGAAC 59.179 45.833 0.00 0.00 39.68 3.62
31 32 4.141321 CCAGGGATTTGAGATCATCAGGAA 60.141 45.833 0.00 0.00 39.68 3.36
32 33 3.393609 CCAGGGATTTGAGATCATCAGGA 59.606 47.826 0.00 0.00 39.68 3.86
33 34 3.137913 ACCAGGGATTTGAGATCATCAGG 59.862 47.826 0.00 0.00 39.68 3.86
34 35 4.434545 ACCAGGGATTTGAGATCATCAG 57.565 45.455 0.00 0.00 39.68 2.90
35 36 4.868172 AACCAGGGATTTGAGATCATCA 57.132 40.909 0.00 0.00 35.62 3.07
36 37 5.444176 AGAAACCAGGGATTTGAGATCATC 58.556 41.667 0.00 0.00 0.00 2.92
37 38 5.444176 GAGAAACCAGGGATTTGAGATCAT 58.556 41.667 0.00 0.00 0.00 2.45
38 39 4.324563 GGAGAAACCAGGGATTTGAGATCA 60.325 45.833 0.00 0.00 38.79 2.92
39 40 4.080072 AGGAGAAACCAGGGATTTGAGATC 60.080 45.833 0.00 0.00 42.04 2.75
40 41 3.854994 AGGAGAAACCAGGGATTTGAGAT 59.145 43.478 0.00 0.00 42.04 2.75
41 42 3.009473 CAGGAGAAACCAGGGATTTGAGA 59.991 47.826 0.00 0.00 42.04 3.27
42 43 3.350833 CAGGAGAAACCAGGGATTTGAG 58.649 50.000 0.00 0.00 42.04 3.02
43 44 2.041620 CCAGGAGAAACCAGGGATTTGA 59.958 50.000 0.00 0.00 41.01 2.69
44 45 2.450476 CCAGGAGAAACCAGGGATTTG 58.550 52.381 0.00 0.00 41.01 2.32
45 46 1.272704 GCCAGGAGAAACCAGGGATTT 60.273 52.381 0.00 0.00 44.30 2.17
46 47 0.332972 GCCAGGAGAAACCAGGGATT 59.667 55.000 0.00 0.00 44.30 3.01
47 48 0.551131 AGCCAGGAGAAACCAGGGAT 60.551 55.000 0.00 0.00 44.30 3.85
48 49 1.151810 AGCCAGGAGAAACCAGGGA 60.152 57.895 0.00 0.00 44.30 4.20
49 50 1.301293 GAGCCAGGAGAAACCAGGG 59.699 63.158 0.00 0.00 44.30 4.45
50 51 1.301293 GGAGCCAGGAGAAACCAGG 59.699 63.158 0.00 0.00 46.49 4.45
51 52 1.204113 AGGGAGCCAGGAGAAACCAG 61.204 60.000 0.00 0.00 42.04 4.00
52 53 1.151810 AGGGAGCCAGGAGAAACCA 60.152 57.895 0.00 0.00 42.04 3.67
53 54 1.301293 CAGGGAGCCAGGAGAAACC 59.699 63.158 0.00 0.00 39.35 3.27
54 55 1.377856 GCAGGGAGCCAGGAGAAAC 60.378 63.158 0.00 0.00 37.23 2.78
55 56 3.081554 GCAGGGAGCCAGGAGAAA 58.918 61.111 0.00 0.00 37.23 2.52
64 65 1.160137 CATATTAAGCGGCAGGGAGC 58.840 55.000 1.45 0.00 44.65 4.70
65 66 1.160137 GCATATTAAGCGGCAGGGAG 58.840 55.000 1.45 0.00 0.00 4.30
66 67 0.250727 GGCATATTAAGCGGCAGGGA 60.251 55.000 1.45 0.00 0.00 4.20
67 68 0.250901 AGGCATATTAAGCGGCAGGG 60.251 55.000 1.45 0.00 0.00 4.45
68 69 2.472695 TAGGCATATTAAGCGGCAGG 57.527 50.000 1.45 0.00 0.00 4.85
69 70 5.504665 GCATAATAGGCATATTAAGCGGCAG 60.505 44.000 18.80 4.95 38.24 4.85
70 71 4.335315 GCATAATAGGCATATTAAGCGGCA 59.665 41.667 18.80 0.00 38.24 5.69
71 72 4.335315 TGCATAATAGGCATATTAAGCGGC 59.665 41.667 24.58 19.44 45.25 6.53
72 73 6.435430 TTGCATAATAGGCATATTAAGCGG 57.565 37.500 24.58 12.87 45.25 5.52
73 74 9.438291 GTTATTGCATAATAGGCATATTAAGCG 57.562 33.333 24.58 14.03 45.25 4.68
78 79 8.246180 GCAGTGTTATTGCATAATAGGCATATT 58.754 33.333 8.86 8.86 41.58 1.28
79 80 7.394077 TGCAGTGTTATTGCATAATAGGCATAT 59.606 33.333 0.00 0.72 45.89 1.78
80 81 6.714356 TGCAGTGTTATTGCATAATAGGCATA 59.286 34.615 0.00 0.00 45.89 3.14
81 82 5.535783 TGCAGTGTTATTGCATAATAGGCAT 59.464 36.000 0.00 0.00 45.89 4.40
82 83 4.886489 TGCAGTGTTATTGCATAATAGGCA 59.114 37.500 0.00 0.00 45.89 4.75
83 84 5.437289 TGCAGTGTTATTGCATAATAGGC 57.563 39.130 0.00 0.00 45.89 3.93
107 108 9.916360 CCCCTTCCACTTTACTTTTTATAGTAT 57.084 33.333 0.00 0.00 31.09 2.12
108 109 7.830697 GCCCCTTCCACTTTACTTTTTATAGTA 59.169 37.037 0.00 0.00 0.00 1.82
109 110 6.662234 GCCCCTTCCACTTTACTTTTTATAGT 59.338 38.462 0.00 0.00 0.00 2.12
110 111 6.183360 CGCCCCTTCCACTTTACTTTTTATAG 60.183 42.308 0.00 0.00 0.00 1.31
111 112 5.648960 CGCCCCTTCCACTTTACTTTTTATA 59.351 40.000 0.00 0.00 0.00 0.98
112 113 4.461431 CGCCCCTTCCACTTTACTTTTTAT 59.539 41.667 0.00 0.00 0.00 1.40
113 114 3.822167 CGCCCCTTCCACTTTACTTTTTA 59.178 43.478 0.00 0.00 0.00 1.52
114 115 2.626266 CGCCCCTTCCACTTTACTTTTT 59.374 45.455 0.00 0.00 0.00 1.94
115 116 2.235891 CGCCCCTTCCACTTTACTTTT 58.764 47.619 0.00 0.00 0.00 2.27
116 117 1.905637 CGCCCCTTCCACTTTACTTT 58.094 50.000 0.00 0.00 0.00 2.66
117 118 0.608308 GCGCCCCTTCCACTTTACTT 60.608 55.000 0.00 0.00 0.00 2.24
118 119 1.002502 GCGCCCCTTCCACTTTACT 60.003 57.895 0.00 0.00 0.00 2.24
119 120 2.044555 GGCGCCCCTTCCACTTTAC 61.045 63.158 18.11 0.00 0.00 2.01
120 121 2.193087 GAGGCGCCCCTTCCACTTTA 62.193 60.000 26.15 0.00 43.12 1.85
121 122 3.569200 GAGGCGCCCCTTCCACTTT 62.569 63.158 26.15 0.00 43.12 2.66
122 123 4.035102 GAGGCGCCCCTTCCACTT 62.035 66.667 26.15 0.00 43.12 3.16
124 125 4.475135 GAGAGGCGCCCCTTCCAC 62.475 72.222 26.15 7.96 43.12 4.02
126 127 4.475135 GTGAGAGGCGCCCCTTCC 62.475 72.222 26.15 6.21 43.12 3.46
127 128 2.960688 AAGTGAGAGGCGCCCCTTC 61.961 63.158 26.15 18.73 43.12 3.46
128 129 2.930562 AAGTGAGAGGCGCCCCTT 60.931 61.111 26.15 14.53 43.12 3.95
129 130 3.710722 CAAGTGAGAGGCGCCCCT 61.711 66.667 26.15 19.44 46.74 4.79
130 131 3.706373 TCAAGTGAGAGGCGCCCC 61.706 66.667 26.15 12.96 0.00 5.80
131 132 2.435059 GTCAAGTGAGAGGCGCCC 60.435 66.667 26.15 15.34 0.00 6.13
132 133 2.029844 GTGTCAAGTGAGAGGCGCC 61.030 63.158 21.89 21.89 0.00 6.53
133 134 2.029844 GGTGTCAAGTGAGAGGCGC 61.030 63.158 0.00 0.00 0.00 6.53
134 135 1.734477 CGGTGTCAAGTGAGAGGCG 60.734 63.158 0.00 0.00 0.00 5.52
135 136 2.029844 GCGGTGTCAAGTGAGAGGC 61.030 63.158 0.00 0.00 0.00 4.70
136 137 1.374758 GGCGGTGTCAAGTGAGAGG 60.375 63.158 0.00 0.00 0.00 3.69
137 138 1.374758 GGGCGGTGTCAAGTGAGAG 60.375 63.158 0.00 0.00 0.00 3.20
138 139 2.099652 CTGGGCGGTGTCAAGTGAGA 62.100 60.000 0.00 0.00 0.00 3.27
139 140 1.669115 CTGGGCGGTGTCAAGTGAG 60.669 63.158 0.00 0.00 0.00 3.51
140 141 2.425592 CTGGGCGGTGTCAAGTGA 59.574 61.111 0.00 0.00 0.00 3.41
141 142 3.357079 GCTGGGCGGTGTCAAGTG 61.357 66.667 0.00 0.00 0.00 3.16
142 143 3.120086 AAGCTGGGCGGTGTCAAGT 62.120 57.895 0.00 0.00 0.00 3.16
143 144 2.281761 AAGCTGGGCGGTGTCAAG 60.282 61.111 0.00 0.00 0.00 3.02
144 145 2.281484 GAAGCTGGGCGGTGTCAA 60.281 61.111 0.00 0.00 0.00 3.18
145 146 4.329545 GGAAGCTGGGCGGTGTCA 62.330 66.667 0.00 0.00 0.00 3.58
146 147 3.959991 GAGGAAGCTGGGCGGTGTC 62.960 68.421 0.00 0.00 0.00 3.67
147 148 4.021925 GAGGAAGCTGGGCGGTGT 62.022 66.667 0.00 0.00 0.00 4.16
148 149 3.672295 GAGAGGAAGCTGGGCGGTG 62.672 68.421 0.00 0.00 0.00 4.94
149 150 3.394836 GAGAGGAAGCTGGGCGGT 61.395 66.667 0.00 0.00 0.00 5.68
150 151 3.382803 CTGAGAGGAAGCTGGGCGG 62.383 68.421 0.00 0.00 0.00 6.13
151 152 2.186384 CTGAGAGGAAGCTGGGCG 59.814 66.667 0.00 0.00 0.00 6.13
152 153 2.588989 CCTGAGAGGAAGCTGGGC 59.411 66.667 0.00 0.00 37.67 5.36
153 154 2.588989 GCCTGAGAGGAAGCTGGG 59.411 66.667 0.00 0.00 37.67 4.45
154 155 2.186384 CGCCTGAGAGGAAGCTGG 59.814 66.667 0.00 0.00 37.67 4.85
155 156 2.186384 CCGCCTGAGAGGAAGCTG 59.814 66.667 0.00 0.00 37.67 4.24
156 157 3.780173 GCCGCCTGAGAGGAAGCT 61.780 66.667 0.00 0.00 37.67 3.74
183 184 4.028490 CTAGTGGTTGGGGCGCCA 62.028 66.667 30.85 20.22 0.00 5.69
184 185 2.187896 TTACTAGTGGTTGGGGCGCC 62.188 60.000 21.18 21.18 0.00 6.53
185 186 1.022982 GTTACTAGTGGTTGGGGCGC 61.023 60.000 5.39 0.00 0.00 6.53
186 187 0.322322 TGTTACTAGTGGTTGGGGCG 59.678 55.000 5.39 0.00 0.00 6.13
187 188 2.801077 ATGTTACTAGTGGTTGGGGC 57.199 50.000 5.39 0.00 0.00 5.80
188 189 4.007659 GTGAATGTTACTAGTGGTTGGGG 58.992 47.826 5.39 0.00 0.00 4.96
189 190 4.647611 TGTGAATGTTACTAGTGGTTGGG 58.352 43.478 5.39 0.00 0.00 4.12
190 191 5.333798 CGTTGTGAATGTTACTAGTGGTTGG 60.334 44.000 5.39 0.00 0.00 3.77
191 192 5.333798 CCGTTGTGAATGTTACTAGTGGTTG 60.334 44.000 5.39 0.00 0.00 3.77
192 193 4.753107 CCGTTGTGAATGTTACTAGTGGTT 59.247 41.667 5.39 0.00 0.00 3.67
193 194 4.202284 ACCGTTGTGAATGTTACTAGTGGT 60.202 41.667 5.39 0.00 0.00 4.16
194 195 4.151689 CACCGTTGTGAATGTTACTAGTGG 59.848 45.833 5.39 0.00 45.76 4.00
195 196 4.748102 ACACCGTTGTGAATGTTACTAGTG 59.252 41.667 5.39 0.00 45.76 2.74
196 197 4.952460 ACACCGTTGTGAATGTTACTAGT 58.048 39.130 0.00 0.00 45.76 2.57
209 210 3.206246 CAACCGCCACACCGTTGT 61.206 61.111 0.00 0.00 35.84 3.32
210 211 2.892334 CTCAACCGCCACACCGTTG 61.892 63.158 0.00 0.00 0.00 4.10
211 212 2.590575 CTCAACCGCCACACCGTT 60.591 61.111 0.00 0.00 0.00 4.44
212 213 4.619227 CCTCAACCGCCACACCGT 62.619 66.667 0.00 0.00 0.00 4.83
221 222 2.583593 GAGCTAGCGCCTCAACCG 60.584 66.667 9.55 0.00 36.60 4.44
222 223 2.202946 GGAGCTAGCGCCTCAACC 60.203 66.667 28.22 11.35 36.60 3.77
223 224 2.583593 CGGAGCTAGCGCCTCAAC 60.584 66.667 31.16 8.58 36.60 3.18
224 225 3.838271 CCGGAGCTAGCGCCTCAA 61.838 66.667 31.16 0.00 36.60 3.02
233 234 4.733725 AACCAGGGGCCGGAGCTA 62.734 66.667 5.05 0.00 39.73 3.32
243 244 3.814268 CATTGGCGCGAACCAGGG 61.814 66.667 12.10 0.54 41.82 4.45
244 245 1.656818 ATTCATTGGCGCGAACCAGG 61.657 55.000 12.10 5.23 41.82 4.45
245 246 0.523968 CATTCATTGGCGCGAACCAG 60.524 55.000 12.10 0.63 41.82 4.00
246 247 1.240641 ACATTCATTGGCGCGAACCA 61.241 50.000 12.10 5.63 38.16 3.67
247 248 0.523335 GACATTCATTGGCGCGAACC 60.523 55.000 12.10 2.07 0.00 3.62
248 249 0.447801 AGACATTCATTGGCGCGAAC 59.552 50.000 12.10 1.21 38.94 3.95
249 250 1.135717 CAAGACATTCATTGGCGCGAA 60.136 47.619 12.10 7.47 38.94 4.70
250 251 0.447406 CAAGACATTCATTGGCGCGA 59.553 50.000 12.10 0.00 38.94 5.87
251 252 1.135699 GCAAGACATTCATTGGCGCG 61.136 55.000 0.00 0.00 38.94 6.86
252 253 0.171903 AGCAAGACATTCATTGGCGC 59.828 50.000 0.00 0.00 38.94 6.53
253 254 3.763097 TTAGCAAGACATTCATTGGCG 57.237 42.857 0.00 0.00 38.94 5.69
306 308 5.567154 TGTATTGATTGCATCGTCGTTTTTG 59.433 36.000 0.00 0.00 0.00 2.44
307 309 5.694816 TGTATTGATTGCATCGTCGTTTTT 58.305 33.333 0.00 0.00 0.00 1.94
313 315 6.628856 GTGTGTAATGTATTGATTGCATCGTC 59.371 38.462 0.00 0.00 31.69 4.20
318 320 5.871465 ACGTGTGTAATGTATTGATTGCA 57.129 34.783 0.00 0.00 0.00 4.08
352 354 8.336235 TGTTATTTTAGATGGATTGGGAGAACT 58.664 33.333 0.00 0.00 0.00 3.01
407 409 2.410322 ATTGCTGGGGACACTTCGCA 62.410 55.000 0.00 0.00 36.18 5.10
550 553 3.670377 GTTGGTTGCGGCCCTGTC 61.670 66.667 0.00 0.00 0.00 3.51
600 603 2.000983 GGGATTAAACCGGGGGTGA 58.999 57.895 6.32 0.00 35.34 4.02
794 797 0.610232 GATGGGCAGCACAGGAGTTT 60.610 55.000 2.40 0.00 0.00 2.66
811 819 1.499007 GAGGGAGAGGGACAGAGAGAT 59.501 57.143 0.00 0.00 0.00 2.75
819 827 0.686112 CTCAGTGGAGGGAGAGGGAC 60.686 65.000 0.00 0.00 37.51 4.46
824 832 0.333312 GGAGACTCAGTGGAGGGAGA 59.667 60.000 4.53 0.00 45.81 3.71
825 833 0.334676 AGGAGACTCAGTGGAGGGAG 59.665 60.000 4.53 0.00 45.81 4.30
826 834 0.040351 CAGGAGACTCAGTGGAGGGA 59.960 60.000 4.53 0.00 45.81 4.20
827 835 0.252012 ACAGGAGACTCAGTGGAGGG 60.252 60.000 4.53 0.00 45.81 4.30
828 836 0.894141 CACAGGAGACTCAGTGGAGG 59.106 60.000 15.73 0.92 45.81 4.30
829 837 0.246086 GCACAGGAGACTCAGTGGAG 59.754 60.000 21.61 10.18 46.96 3.86
830 838 0.178950 AGCACAGGAGACTCAGTGGA 60.179 55.000 21.61 0.00 40.21 4.02
1065 1240 2.752903 GGCACGGAAATTACACTTCCAT 59.247 45.455 2.76 0.00 42.22 3.41
1067 1242 2.913777 GGCACGGAAATTACACTTCC 57.086 50.000 0.00 0.00 39.25 3.46
1104 1283 1.412361 CCAAAAACCCCACCTGAGGAA 60.412 52.381 4.99 0.00 0.00 3.36
1107 1286 1.471829 GGCCAAAAACCCCACCTGAG 61.472 60.000 0.00 0.00 0.00 3.35
1110 1289 0.327095 AAAGGCCAAAAACCCCACCT 60.327 50.000 5.01 0.00 0.00 4.00
1112 1291 1.674359 CAAAAGGCCAAAAACCCCAC 58.326 50.000 5.01 0.00 0.00 4.61
1117 1296 0.840617 TCCCCCAAAAGGCCAAAAAC 59.159 50.000 5.01 0.00 0.00 2.43
1118 1297 1.492599 CTTCCCCCAAAAGGCCAAAAA 59.507 47.619 5.01 0.00 0.00 1.94
1124 1314 0.037160 TACGACTTCCCCCAAAAGGC 59.963 55.000 0.00 0.00 0.00 4.35
1146 1336 4.033358 CAGATAAGACTGGAACAATCGTGC 59.967 45.833 0.00 0.00 40.74 5.34
1149 1339 4.269603 CAGCAGATAAGACTGGAACAATCG 59.730 45.833 0.00 0.00 40.74 3.34
1162 1352 4.083643 CCACACAAGACAACAGCAGATAAG 60.084 45.833 0.00 0.00 0.00 1.73
1176 1366 3.593442 AATTCAACCTCCCACACAAGA 57.407 42.857 0.00 0.00 0.00 3.02
1177 1367 3.191371 GCTAATTCAACCTCCCACACAAG 59.809 47.826 0.00 0.00 0.00 3.16
1290 1489 7.667219 AGAAATGAAGCTCACAGATTTAGGAAA 59.333 33.333 0.00 0.00 0.00 3.13
1345 1544 7.554835 AGCAATATTCCCGATAACAACAGTAAA 59.445 33.333 0.00 0.00 0.00 2.01
1401 1600 7.798596 AAAATCTGCACTCCATTCTATGTAG 57.201 36.000 0.00 0.00 0.00 2.74
1404 1603 7.594015 GCATAAAAATCTGCACTCCATTCTATG 59.406 37.037 0.00 0.00 38.28 2.23
1457 1657 7.148590 GCAAGTTTGAACAATTTTCTTCACAGT 60.149 33.333 0.00 0.00 0.00 3.55
1466 1666 3.202097 CCCCGCAAGTTTGAACAATTTT 58.798 40.909 0.00 0.00 0.00 1.82
1477 1677 1.615919 CCAACTATTCCCCCGCAAGTT 60.616 52.381 0.00 0.00 0.00 2.66
1499 1701 0.097674 GCCGCAATGTTAGCACTCTG 59.902 55.000 0.00 0.00 0.00 3.35
1529 1731 5.648092 GCAGATTCAAGTACTTGTTGGGTAT 59.352 40.000 29.83 16.48 41.16 2.73
1644 1846 1.195674 GTCGCCAACTGAAGCTCTTTC 59.804 52.381 0.00 0.00 36.29 2.62
1647 1849 1.004440 GGTCGCCAACTGAAGCTCT 60.004 57.895 0.00 0.00 0.00 4.09
1674 1876 7.552687 CCTTCACCAAGCTTGTTATCATAGTTA 59.447 37.037 24.35 2.24 0.00 2.24
1786 1990 6.336566 ACAACAAATCATAACACAAGTTGCA 58.663 32.000 1.81 0.00 38.82 4.08
1844 2062 3.432252 CCACTTCATTGTCCTGTTCGTAC 59.568 47.826 0.00 0.00 0.00 3.67
1872 2090 1.752694 ACAAGCACCAACAACCGCT 60.753 52.632 0.00 0.00 35.90 5.52
2017 2237 1.269257 GCACTTTCAAAGAGTGTGGGC 60.269 52.381 3.49 0.00 44.88 5.36
2041 2261 3.493699 CCACCAGACCAGAAAGTTCGTTA 60.494 47.826 0.00 0.00 0.00 3.18
2248 2471 8.031277 CAGGCCATATATGCTTTCTAATTTTCC 58.969 37.037 5.01 0.00 0.00 3.13
2470 2954 2.457366 AGGAAACTAAGACGTGGCAG 57.543 50.000 0.00 0.00 40.61 4.85
2500 2984 1.682702 GTGACACATGATGGGGCATCA 60.683 52.381 6.46 0.00 43.19 3.07
2610 3094 1.746615 ACTTATGCCACTGCGCCAG 60.747 57.895 4.18 4.99 41.78 4.85
2658 3142 6.588204 TCTAGAAAAACACAAGCTACCAAGA 58.412 36.000 0.00 0.00 0.00 3.02
2752 3447 6.202954 AGCAGTTCTAACACACTGTCATTTAC 59.797 38.462 1.55 0.00 42.19 2.01
2963 3820 2.362077 ACATGGCACTTCAACTGAAACC 59.638 45.455 0.00 0.00 33.07 3.27
3042 3899 4.779993 ACTAGGCTGGGAAGGAATTAAG 57.220 45.455 2.02 0.00 0.00 1.85
3052 3909 1.831736 GAGTTGCTAACTAGGCTGGGA 59.168 52.381 2.02 0.00 43.03 4.37
3057 3914 3.665190 ACAGTTGAGTTGCTAACTAGGC 58.335 45.455 0.00 0.00 43.03 3.93
3069 3926 5.301551 TGTTGCATGGAATAAACAGTTGAGT 59.698 36.000 1.94 0.00 31.06 3.41
3089 3946 2.664916 CCTTTTCACCGCAATCTGTTG 58.335 47.619 0.00 0.00 38.39 3.33
3426 4283 6.253758 TGAAGATAACTACAAGGTGGAGAGA 58.746 40.000 0.00 0.00 31.17 3.10
3431 4288 5.817816 GGTGATGAAGATAACTACAAGGTGG 59.182 44.000 0.00 0.00 0.00 4.61
3529 4386 0.871722 CAAACCCGAAATCAGCGACA 59.128 50.000 0.00 0.00 0.00 4.35
3601 4458 3.204418 GGCGCTAGGTAACCGAGT 58.796 61.111 7.64 0.00 37.17 4.18
3613 4470 3.550431 ATGGCATACTCCGGCGCT 61.550 61.111 7.64 0.00 0.00 5.92
3658 4515 0.798771 GCACTCCGAAGCTGTAGACG 60.799 60.000 0.00 0.00 0.00 4.18
3712 4569 5.988310 TTGTCGTAGGGTTTATCTTCTCA 57.012 39.130 0.00 0.00 0.00 3.27
3901 4758 3.405831 CTTGAGCATCTCCACAACTTCA 58.594 45.455 0.00 0.00 34.92 3.02
3904 4761 1.004044 CCCTTGAGCATCTCCACAACT 59.996 52.381 0.00 0.00 34.92 3.16
3945 4802 6.471233 ACAGATCGTCATTCTCCAAGATAA 57.529 37.500 0.00 0.00 0.00 1.75
3946 4803 6.096846 TGAACAGATCGTCATTCTCCAAGATA 59.903 38.462 0.00 0.00 0.00 1.98
3982 4839 2.667418 CCCTGGACAGAGCTGGTG 59.333 66.667 0.00 0.00 34.19 4.17
4021 4881 0.965866 TCTCTTCGGTGATGGCGTCT 60.966 55.000 8.40 0.00 0.00 4.18
4149 5009 3.251729 GCACAGACAGACACAAATCACAT 59.748 43.478 0.00 0.00 0.00 3.21
4162 5024 1.795768 ACAACCATACGCACAGACAG 58.204 50.000 0.00 0.00 0.00 3.51
4195 5057 2.817844 GGTAAAGGGCACAAGTAACCTG 59.182 50.000 0.00 0.00 32.66 4.00
4196 5058 2.444010 TGGTAAAGGGCACAAGTAACCT 59.556 45.455 0.00 0.00 34.04 3.50
4206 5068 0.400213 CTGTGGACTGGTAAAGGGCA 59.600 55.000 0.00 0.00 0.00 5.36
4223 5085 3.600388 GGAACCCAGACAAGTACATCTG 58.400 50.000 12.52 12.52 41.75 2.90
4236 5098 1.153046 AACCACACACGGAACCCAG 60.153 57.895 0.00 0.00 0.00 4.45
4237 5099 1.452289 CAACCACACACGGAACCCA 60.452 57.895 0.00 0.00 0.00 4.51
4238 5100 0.536460 ATCAACCACACACGGAACCC 60.536 55.000 0.00 0.00 0.00 4.11
4249 5111 4.213906 CCATTGCCAAAAGAAATCAACCAC 59.786 41.667 0.00 0.00 0.00 4.16
4251 5113 4.388485 ACCATTGCCAAAAGAAATCAACC 58.612 39.130 0.00 0.00 0.00 3.77
4276 5138 3.074412 AGAATCTTACAAGCCCACGTTG 58.926 45.455 0.00 0.00 0.00 4.10
4277 5139 3.418684 AGAATCTTACAAGCCCACGTT 57.581 42.857 0.00 0.00 0.00 3.99
4279 5141 5.220854 CCAATAAGAATCTTACAAGCCCACG 60.221 44.000 4.66 0.00 0.00 4.94
4282 5144 6.038714 CAGTCCAATAAGAATCTTACAAGCCC 59.961 42.308 4.66 0.00 0.00 5.19
4330 5192 5.598416 TGAGTGAGTACAGGAATACATGG 57.402 43.478 0.00 0.00 31.68 3.66
4336 5198 8.375506 TGAGTTAAATTGAGTGAGTACAGGAAT 58.624 33.333 0.00 0.00 0.00 3.01
4386 5248 3.043586 CAAGTATAAGTCGCTAGCCGTG 58.956 50.000 9.66 0.00 38.35 4.94
4391 5253 2.727777 TGCGCAAGTATAAGTCGCTAG 58.272 47.619 8.16 0.00 45.24 3.42
4428 5290 9.956720 CTGACAAAATCATGATAAAATCTACCC 57.043 33.333 9.04 0.00 36.48 3.69
4440 5302 7.773489 TTCCCATTAACTGACAAAATCATGA 57.227 32.000 0.00 0.00 36.48 3.07
4448 5310 8.887717 CAATTTTTGTTTCCCATTAACTGACAA 58.112 29.630 0.00 0.00 0.00 3.18
4450 5312 8.432110 ACAATTTTTGTTTCCCATTAACTGAC 57.568 30.769 0.00 0.00 42.22 3.51
4451 5313 7.713073 GGACAATTTTTGTTTCCCATTAACTGA 59.287 33.333 0.00 0.00 45.52 3.41
4452 5314 7.497249 TGGACAATTTTTGTTTCCCATTAACTG 59.503 33.333 0.00 0.00 45.52 3.16
4453 5315 7.569240 TGGACAATTTTTGTTTCCCATTAACT 58.431 30.769 0.00 0.00 45.52 2.24
4454 5316 7.793927 TGGACAATTTTTGTTTCCCATTAAC 57.206 32.000 0.00 0.00 45.52 2.01
4480 5353 7.005062 ACGAAATTATGTTCTCTATGTGTGC 57.995 36.000 0.00 0.00 0.00 4.57
4503 5376 8.071368 TGACATAAAGATGGTGACGTTTTTAAC 58.929 33.333 0.00 0.00 38.79 2.01
4504 5377 8.155821 TGACATAAAGATGGTGACGTTTTTAA 57.844 30.769 0.00 0.00 38.79 1.52
4505 5378 7.731882 TGACATAAAGATGGTGACGTTTTTA 57.268 32.000 0.00 0.00 39.40 1.52
4506 5379 6.627395 TGACATAAAGATGGTGACGTTTTT 57.373 33.333 0.00 0.00 37.42 1.94
4507 5380 6.817765 ATGACATAAAGATGGTGACGTTTT 57.182 33.333 0.00 0.00 37.39 2.43
4508 5381 8.506168 AATATGACATAAAGATGGTGACGTTT 57.494 30.769 0.00 0.00 37.39 3.60
4509 5382 7.987458 AGAATATGACATAAAGATGGTGACGTT 59.013 33.333 0.00 0.00 37.39 3.99
4510 5383 7.500992 AGAATATGACATAAAGATGGTGACGT 58.499 34.615 0.00 0.00 37.39 4.34
4511 5384 7.953158 AGAATATGACATAAAGATGGTGACG 57.047 36.000 0.00 0.00 37.39 4.35
4512 5385 9.330063 TCAAGAATATGACATAAAGATGGTGAC 57.670 33.333 0.00 0.00 37.39 3.67
4531 5404 9.653287 TGACGAACTCTTATATTTGTCAAGAAT 57.347 29.630 4.87 0.00 43.23 2.40
4532 5405 8.922676 GTGACGAACTCTTATATTTGTCAAGAA 58.077 33.333 8.29 0.00 46.08 2.52
4533 5406 8.085909 TGTGACGAACTCTTATATTTGTCAAGA 58.914 33.333 8.29 0.00 46.08 3.02
4534 5407 8.239681 TGTGACGAACTCTTATATTTGTCAAG 57.760 34.615 8.29 0.00 46.08 3.02
4535 5408 7.330946 CCTGTGACGAACTCTTATATTTGTCAA 59.669 37.037 8.29 0.00 46.08 3.18
4536 5409 6.811665 CCTGTGACGAACTCTTATATTTGTCA 59.188 38.462 3.46 3.46 43.72 3.58
4537 5410 6.237861 GCCTGTGACGAACTCTTATATTTGTC 60.238 42.308 0.00 0.00 38.98 3.18
4538 5411 5.581085 GCCTGTGACGAACTCTTATATTTGT 59.419 40.000 0.00 0.00 0.00 2.83
4539 5412 5.812642 AGCCTGTGACGAACTCTTATATTTG 59.187 40.000 0.00 0.00 0.00 2.32
4540 5413 5.978814 AGCCTGTGACGAACTCTTATATTT 58.021 37.500 0.00 0.00 0.00 1.40
4541 5414 5.599999 AGCCTGTGACGAACTCTTATATT 57.400 39.130 0.00 0.00 0.00 1.28
4542 5415 5.277876 CGTAGCCTGTGACGAACTCTTATAT 60.278 44.000 0.00 0.00 41.60 0.86
4543 5416 4.034858 CGTAGCCTGTGACGAACTCTTATA 59.965 45.833 0.00 0.00 41.60 0.98
4544 5417 3.181499 CGTAGCCTGTGACGAACTCTTAT 60.181 47.826 0.00 0.00 41.60 1.73
4545 5418 2.161012 CGTAGCCTGTGACGAACTCTTA 59.839 50.000 0.00 0.00 41.60 2.10
4546 5419 1.068472 CGTAGCCTGTGACGAACTCTT 60.068 52.381 0.00 0.00 41.60 2.85
4553 5426 1.306148 TCTATCCGTAGCCTGTGACG 58.694 55.000 0.00 0.00 38.79 4.35
4555 5428 3.821600 GAGATTCTATCCGTAGCCTGTGA 59.178 47.826 0.00 0.00 0.00 3.58
4558 5431 6.576662 TTAAGAGATTCTATCCGTAGCCTG 57.423 41.667 0.00 0.00 0.00 4.85
4566 5439 9.732130 AAACATGCCTATTAAGAGATTCTATCC 57.268 33.333 0.00 0.00 0.00 2.59
4579 5452 8.961634 TGCTGTTTGTATTAAACATGCCTATTA 58.038 29.630 16.54 0.00 39.16 0.98
4585 5458 7.168972 TGTTTCTGCTGTTTGTATTAAACATGC 59.831 33.333 5.77 10.98 39.16 4.06
4588 5461 7.767261 AGTGTTTCTGCTGTTTGTATTAAACA 58.233 30.769 5.27 5.27 37.76 2.83
4595 5468 5.648526 TGGTAAAGTGTTTCTGCTGTTTGTA 59.351 36.000 0.00 0.00 0.00 2.41
4596 5469 4.461081 TGGTAAAGTGTTTCTGCTGTTTGT 59.539 37.500 0.00 0.00 0.00 2.83
4597 5470 4.992688 TGGTAAAGTGTTTCTGCTGTTTG 58.007 39.130 0.00 0.00 0.00 2.93
4598 5471 5.852282 ATGGTAAAGTGTTTCTGCTGTTT 57.148 34.783 0.00 0.00 0.00 2.83
4600 5473 8.046708 TGATATATGGTAAAGTGTTTCTGCTGT 58.953 33.333 0.00 0.00 0.00 4.40
4601 5474 8.437360 TGATATATGGTAAAGTGTTTCTGCTG 57.563 34.615 0.00 0.00 0.00 4.41
4636 5509 6.672147 AGCAGAAAAATGTAAAGCAGTAGTG 58.328 36.000 0.00 0.00 0.00 2.74
4637 5510 6.884280 AGCAGAAAAATGTAAAGCAGTAGT 57.116 33.333 0.00 0.00 0.00 2.73
4640 5513 7.334171 ACAAAAAGCAGAAAAATGTAAAGCAGT 59.666 29.630 0.00 0.00 0.00 4.40
4641 5514 7.687445 ACAAAAAGCAGAAAAATGTAAAGCAG 58.313 30.769 0.00 0.00 0.00 4.24
4642 5515 7.608308 ACAAAAAGCAGAAAAATGTAAAGCA 57.392 28.000 0.00 0.00 0.00 3.91
4643 5516 8.817100 AGTACAAAAAGCAGAAAAATGTAAAGC 58.183 29.630 0.00 0.00 0.00 3.51
4656 5552 9.462174 TGACAAATTTGATAGTACAAAAAGCAG 57.538 29.630 24.64 0.00 41.88 4.24
4681 5577 6.453092 AGCTCTGGACAAAATCTTTGAATTG 58.547 36.000 6.15 0.00 0.00 2.32
4682 5578 6.661304 AGCTCTGGACAAAATCTTTGAATT 57.339 33.333 6.15 0.00 0.00 2.17
4683 5579 6.453092 CAAGCTCTGGACAAAATCTTTGAAT 58.547 36.000 6.15 0.00 0.00 2.57
4684 5580 5.737063 GCAAGCTCTGGACAAAATCTTTGAA 60.737 40.000 6.15 0.00 0.00 2.69
4685 5581 4.261741 GCAAGCTCTGGACAAAATCTTTGA 60.262 41.667 6.15 0.00 0.00 2.69
4686 5582 3.985925 GCAAGCTCTGGACAAAATCTTTG 59.014 43.478 0.00 0.00 0.00 2.77
4687 5583 3.006217 GGCAAGCTCTGGACAAAATCTTT 59.994 43.478 0.00 0.00 0.00 2.52
4688 5584 2.560105 GGCAAGCTCTGGACAAAATCTT 59.440 45.455 0.00 0.00 0.00 2.40
4689 5585 2.165998 GGCAAGCTCTGGACAAAATCT 58.834 47.619 0.00 0.00 0.00 2.40
4690 5586 1.888512 TGGCAAGCTCTGGACAAAATC 59.111 47.619 0.00 0.00 0.00 2.17
4691 5587 1.891150 CTGGCAAGCTCTGGACAAAAT 59.109 47.619 0.00 0.00 0.00 1.82
4692 5588 1.133823 TCTGGCAAGCTCTGGACAAAA 60.134 47.619 0.00 0.00 0.00 2.44
4693 5589 0.473755 TCTGGCAAGCTCTGGACAAA 59.526 50.000 0.00 0.00 0.00 2.83
4694 5590 0.250467 GTCTGGCAAGCTCTGGACAA 60.250 55.000 0.00 0.00 0.00 3.18
4695 5591 1.372683 GTCTGGCAAGCTCTGGACA 59.627 57.895 0.00 0.00 0.00 4.02
4696 5592 1.376553 GGTCTGGCAAGCTCTGGAC 60.377 63.158 0.00 0.00 0.00 4.02
4697 5593 2.596851 GGGTCTGGCAAGCTCTGGA 61.597 63.158 0.00 0.00 0.00 3.86
4698 5594 2.045536 GGGTCTGGCAAGCTCTGG 60.046 66.667 0.00 0.00 0.00 3.86
4699 5595 0.959372 CAAGGGTCTGGCAAGCTCTG 60.959 60.000 0.00 0.00 0.00 3.35
4700 5596 1.377994 CAAGGGTCTGGCAAGCTCT 59.622 57.895 0.00 0.00 0.00 4.09
4701 5597 0.324943 TACAAGGGTCTGGCAAGCTC 59.675 55.000 0.00 0.00 0.00 4.09
4702 5598 0.995024 ATACAAGGGTCTGGCAAGCT 59.005 50.000 0.00 0.00 0.00 3.74
4703 5599 1.839424 AATACAAGGGTCTGGCAAGC 58.161 50.000 0.00 0.00 0.00 4.01
4704 5600 5.192927 TGATAAATACAAGGGTCTGGCAAG 58.807 41.667 0.00 0.00 0.00 4.01
4705 5601 5.186256 TGATAAATACAAGGGTCTGGCAA 57.814 39.130 0.00 0.00 0.00 4.52
4706 5602 4.853468 TGATAAATACAAGGGTCTGGCA 57.147 40.909 0.00 0.00 0.00 4.92
4707 5603 5.437060 TCTTGATAAATACAAGGGTCTGGC 58.563 41.667 0.00 0.00 43.11 4.85
4708 5604 9.627123 TTATTCTTGATAAATACAAGGGTCTGG 57.373 33.333 0.00 0.00 43.11 3.86
4725 5621 9.074576 TGAACCTCTACGCTATATTATTCTTGA 57.925 33.333 0.00 0.00 0.00 3.02
4730 5626 7.228314 TGCTGAACCTCTACGCTATATTATT 57.772 36.000 0.00 0.00 0.00 1.40
4731 5627 6.835819 TGCTGAACCTCTACGCTATATTAT 57.164 37.500 0.00 0.00 0.00 1.28
4733 5629 5.730296 ATGCTGAACCTCTACGCTATATT 57.270 39.130 0.00 0.00 0.00 1.28
4734 5630 8.698973 ATATATGCTGAACCTCTACGCTATAT 57.301 34.615 0.00 0.00 0.00 0.86
4735 5631 9.274206 CTATATATGCTGAACCTCTACGCTATA 57.726 37.037 0.00 0.00 0.00 1.31
4736 5632 7.776030 ACTATATATGCTGAACCTCTACGCTAT 59.224 37.037 0.00 0.00 0.00 2.97
4737 5633 7.110810 ACTATATATGCTGAACCTCTACGCTA 58.889 38.462 0.00 0.00 0.00 4.26
4739 5635 6.197364 ACTATATATGCTGAACCTCTACGC 57.803 41.667 0.00 0.00 0.00 4.42
4766 5662 9.807386 GCAAAATTAATTAGTCGTAGCGAATAT 57.193 29.630 0.01 0.00 36.39 1.28
4768 5664 7.638683 GTGCAAAATTAATTAGTCGTAGCGAAT 59.361 33.333 0.01 0.00 37.72 3.34
4769 5665 6.957077 GTGCAAAATTAATTAGTCGTAGCGAA 59.043 34.615 0.01 0.00 37.72 4.70
4771 5667 6.475207 AGTGCAAAATTAATTAGTCGTAGCG 58.525 36.000 0.01 0.00 0.00 4.26
4772 5668 8.601476 ACTAGTGCAAAATTAATTAGTCGTAGC 58.399 33.333 0.01 0.00 0.00 3.58
4792 5688 4.913924 GCAGAAACATTTGAAGCACTAGTG 59.086 41.667 18.93 18.93 0.00 2.74
4794 5690 5.152097 CAGCAGAAACATTTGAAGCACTAG 58.848 41.667 0.00 0.00 0.00 2.57
4795 5691 4.580167 ACAGCAGAAACATTTGAAGCACTA 59.420 37.500 0.00 0.00 0.00 2.74
4796 5692 3.382546 ACAGCAGAAACATTTGAAGCACT 59.617 39.130 0.00 0.00 0.00 4.40
4797 5693 3.709987 ACAGCAGAAACATTTGAAGCAC 58.290 40.909 0.00 0.00 0.00 4.40
4799 5695 4.567959 ACAAACAGCAGAAACATTTGAAGC 59.432 37.500 2.27 0.00 34.93 3.86
4800 5696 7.935338 ATACAAACAGCAGAAACATTTGAAG 57.065 32.000 2.27 0.00 34.93 3.02
4803 5699 9.462174 TCTTAATACAAACAGCAGAAACATTTG 57.538 29.630 0.00 0.00 36.54 2.32
4806 5702 9.066892 TCTTCTTAATACAAACAGCAGAAACAT 57.933 29.630 0.00 0.00 0.00 2.71
4808 5704 9.899226 ATTCTTCTTAATACAAACAGCAGAAAC 57.101 29.630 0.00 0.00 0.00 2.78
4812 5708 9.478019 CGTTATTCTTCTTAATACAAACAGCAG 57.522 33.333 0.00 0.00 0.00 4.24
4814 5710 9.474249 GTCGTTATTCTTCTTAATACAAACAGC 57.526 33.333 0.00 0.00 0.00 4.40
4828 5923 7.591006 TTTCCTGTATGTGTCGTTATTCTTC 57.409 36.000 0.00 0.00 0.00 2.87
4829 5924 7.442969 TGTTTTCCTGTATGTGTCGTTATTCTT 59.557 33.333 0.00 0.00 0.00 2.52
4831 5926 7.124347 TGTTTTCCTGTATGTGTCGTTATTC 57.876 36.000 0.00 0.00 0.00 1.75
4838 5933 9.774742 GAGATTTTATGTTTTCCTGTATGTGTC 57.225 33.333 0.00 0.00 0.00 3.67
4845 5940 7.454380 TGGGAATGAGATTTTATGTTTTCCTGT 59.546 33.333 0.00 0.00 33.51 4.00
4850 5945 8.879227 TCCTTTGGGAATGAGATTTTATGTTTT 58.121 29.630 0.00 0.00 38.93 2.43
4884 5979 3.808466 TGTGCTTTATGTGTTTGCCAA 57.192 38.095 0.00 0.00 0.00 4.52
4921 6016 0.460987 GTTCACCTCTCCATGCTCCG 60.461 60.000 0.00 0.00 0.00 4.63
4925 6020 3.004106 GCATAATGTTCACCTCTCCATGC 59.996 47.826 0.00 0.00 0.00 4.06
4962 6063 4.039245 ACGGATAATGTATCACCTGTGAGG 59.961 45.833 6.13 0.00 43.61 3.86
4963 6064 5.201713 ACGGATAATGTATCACCTGTGAG 57.798 43.478 6.13 0.00 43.61 3.51
5002 6103 6.785337 TGTTCATCCTCGTTAGAAATCCTA 57.215 37.500 0.00 0.00 0.00 2.94
5015 6151 8.715998 GTGTGATGATGTATAATGTTCATCCTC 58.284 37.037 8.75 0.00 42.35 3.71
5042 6179 2.125991 ATTTGCAACGCCGCATGG 60.126 55.556 0.00 0.00 42.62 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.