Multiple sequence alignment - TraesCS6D01G164100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G164100 chr6D 100.000 4905 0 0 1 4905 143374823 143379727 0.000000e+00 9058.0
1 TraesCS6D01G164100 chr6D 100.000 32 0 0 2979 3010 143377629 143377660 5.300000e-05 60.2
2 TraesCS6D01G164100 chr6B 87.285 2092 180 34 800 2861 431540483 431538448 0.000000e+00 2311.0
3 TraesCS6D01G164100 chr4A 87.214 2096 168 33 797 2861 16450636 16452662 0.000000e+00 2294.0
4 TraesCS6D01G164100 chr4A 91.944 993 48 7 854 1837 707479160 707480129 0.000000e+00 1362.0
5 TraesCS6D01G164100 chr4A 95.645 620 22 3 2334 2953 707480123 707480737 0.000000e+00 990.0
6 TraesCS6D01G164100 chr4A 90.315 413 31 2 196 600 707478473 707478884 2.600000e-147 532.0
7 TraesCS6D01G164100 chr4A 94.737 247 10 2 3366 3610 707482018 707482263 9.960000e-102 381.0
8 TraesCS6D01G164100 chr4A 92.776 263 18 1 3009 3271 707481461 707481722 3.580000e-101 379.0
9 TraesCS6D01G164100 chr4A 86.400 250 28 5 3716 3963 343882153 343881908 8.090000e-68 268.0
10 TraesCS6D01G164100 chr4A 92.562 121 9 0 2862 2982 16452799 16452919 1.810000e-39 174.0
11 TraesCS6D01G164100 chr4A 100.000 42 0 0 781 822 707479123 707479164 1.460000e-10 78.7
12 TraesCS6D01G164100 chr4A 100.000 32 0 0 2979 3010 16452608 16452639 5.300000e-05 60.2
13 TraesCS6D01G164100 chr4A 100.000 32 0 0 2979 3010 707480593 707480624 5.300000e-05 60.2
14 TraesCS6D01G164100 chr1D 95.804 1406 52 4 1455 2856 370521325 370522727 0.000000e+00 2263.0
15 TraesCS6D01G164100 chr1D 92.978 1239 64 8 781 2011 370354490 370355713 0.000000e+00 1784.0
16 TraesCS6D01G164100 chr1D 93.792 741 32 5 781 1521 370356948 370357674 0.000000e+00 1101.0
17 TraesCS6D01G164100 chr1D 93.520 679 30 6 781 1459 370503883 370504547 0.000000e+00 998.0
18 TraesCS6D01G164100 chr1D 95.556 495 17 2 1522 2011 370502154 370502648 0.000000e+00 787.0
19 TraesCS6D01G164100 chr1D 93.287 432 27 2 169 600 370353270 370353699 1.930000e-178 636.0
20 TraesCS6D01G164100 chr1D 93.056 432 29 1 169 600 370502665 370503095 8.960000e-177 630.0
21 TraesCS6D01G164100 chr1D 92.593 432 28 3 169 600 370355730 370356157 6.980000e-173 617.0
22 TraesCS6D01G164100 chr1D 91.935 186 8 3 600 778 370354260 370354445 2.270000e-63 254.0
23 TraesCS6D01G164100 chr1D 90.674 193 10 4 594 778 370356711 370356903 2.930000e-62 250.0
24 TraesCS6D01G164100 chr1D 90.751 173 11 4 1 170 110656999 110656829 4.940000e-55 226.0
25 TraesCS6D01G164100 chr1D 86.957 184 9 3 1 170 307837284 307837466 5.010000e-45 193.0
26 TraesCS6D01G164100 chr1D 89.109 101 10 1 2882 2982 370522726 370522825 1.850000e-24 124.0
27 TraesCS6D01G164100 chr1D 100.000 32 0 0 2979 3010 370522679 370522710 5.300000e-05 60.2
28 TraesCS6D01G164100 chr4D 89.744 1404 109 12 1259 2643 220956852 220958239 0.000000e+00 1762.0
29 TraesCS6D01G164100 chr4D 87.683 341 25 7 3329 3663 220959398 220959727 9.960000e-102 381.0
30 TraesCS6D01G164100 chr4D 95.495 111 5 0 2863 2973 220958279 220958389 1.400000e-40 178.0
31 TraesCS6D01G164100 chr4D 83.249 197 6 14 1 170 92078470 92078274 6.570000e-34 156.0
32 TraesCS6D01G164100 chr4D 87.218 133 13 1 3088 3220 220959237 220959365 1.100000e-31 148.0
33 TraesCS6D01G164100 chr2D 88.988 1462 104 19 1410 2861 429278416 429279830 0.000000e+00 1755.0
34 TraesCS6D01G164100 chr2D 89.655 174 10 5 1 170 393211657 393211488 1.070000e-51 215.0
35 TraesCS6D01G164100 chr2D 84.018 219 30 5 3445 3663 429281155 429281368 6.440000e-49 206.0
36 TraesCS6D01G164100 chr2D 86.486 185 10 5 1 170 588795078 588794894 6.480000e-44 189.0
37 TraesCS6D01G164100 chr2D 88.571 140 13 3 3445 3584 429280998 429281134 3.040000e-37 167.0
38 TraesCS6D01G164100 chr2D 89.764 127 10 2 2858 2982 429279966 429280091 5.080000e-35 159.0
39 TraesCS6D01G164100 chr2D 100.000 32 0 0 2979 3010 429279776 429279807 5.300000e-05 60.2
40 TraesCS6D01G164100 chr2B 92.665 1118 62 11 3693 4803 491061140 491062244 0.000000e+00 1592.0
41 TraesCS6D01G164100 chr2B 89.098 743 43 11 1496 2218 753103814 753103090 0.000000e+00 889.0
42 TraesCS6D01G164100 chr2B 86.000 250 29 5 3716 3963 23782724 23782479 3.770000e-66 263.0
43 TraesCS6D01G164100 chr2B 92.308 130 8 1 598 725 491060982 491061111 3.020000e-42 183.0
44 TraesCS6D01G164100 chr4B 93.333 1065 39 11 781 1835 611243424 611244466 0.000000e+00 1544.0
45 TraesCS6D01G164100 chr4B 95.968 620 21 3 2334 2953 611244462 611245077 0.000000e+00 1003.0
46 TraesCS6D01G164100 chr4B 90.777 412 29 5 196 600 611242776 611243185 4.320000e-150 542.0
47 TraesCS6D01G164100 chr4B 94.098 305 17 1 3306 3610 611246362 611246665 3.460000e-126 462.0
48 TraesCS6D01G164100 chr4B 92.308 299 22 1 3314 3611 611284442 611284740 1.630000e-114 424.0
49 TraesCS6D01G164100 chr4B 93.238 281 18 1 3009 3289 611283959 611284238 3.530000e-111 412.0
50 TraesCS6D01G164100 chr4B 93.478 276 18 0 3009 3284 611245832 611246107 1.270000e-110 411.0
51 TraesCS6D01G164100 chr4B 100.000 32 0 0 2979 3010 611244932 611244963 5.300000e-05 60.2
52 TraesCS6D01G164100 chr3B 91.943 1117 68 11 3693 4803 733632562 733633662 0.000000e+00 1544.0
53 TraesCS6D01G164100 chr3B 90.827 1101 70 13 3693 4776 17634945 17633859 0.000000e+00 1445.0
54 TraesCS6D01G164100 chr3B 89.416 548 44 9 3693 4237 691278964 691279500 0.000000e+00 678.0
55 TraesCS6D01G164100 chr3B 92.500 400 29 1 201 600 17636059 17635661 5.510000e-159 571.0
56 TraesCS6D01G164100 chr3B 92.462 398 28 2 203 598 733631440 733631837 7.130000e-158 568.0
57 TraesCS6D01G164100 chr3B 92.348 379 29 0 222 600 691277872 691278250 1.550000e-149 540.0
58 TraesCS6D01G164100 chr3B 92.694 219 15 1 3693 3910 823037844 823038062 1.020000e-81 315.0
59 TraesCS6D01G164100 chr3B 92.029 138 4 2 598 728 733632399 733632536 2.330000e-43 187.0
60 TraesCS6D01G164100 chr3B 92.537 134 4 2 598 725 823037682 823037815 2.330000e-43 187.0
61 TraesCS6D01G164100 chr3B 91.241 137 6 2 598 728 691278802 691278938 1.080000e-41 182.0
62 TraesCS6D01G164100 chr3B 93.069 101 5 2 203 303 654427824 654427922 3.960000e-31 147.0
63 TraesCS6D01G164100 chr3B 92.079 101 6 2 203 303 120669506 120669604 1.840000e-29 141.0
64 TraesCS6D01G164100 chr1A 86.996 1415 111 21 799 2185 529600846 529602215 0.000000e+00 1526.0
65 TraesCS6D01G164100 chr1A 89.415 633 42 12 2231 2861 529602205 529602814 0.000000e+00 774.0
66 TraesCS6D01G164100 chr1A 91.736 121 10 0 2862 2982 529602952 529603072 8.440000e-38 169.0
67 TraesCS6D01G164100 chr1A 94.872 39 0 2 2972 3010 529602755 529602791 5.300000e-05 60.2
68 TraesCS6D01G164100 chr7D 90.343 963 72 9 1901 2861 593970780 593971723 0.000000e+00 1243.0
69 TraesCS6D01G164100 chr7D 87.477 543 60 5 808 1348 593970086 593970622 1.940000e-173 619.0
70 TraesCS6D01G164100 chr7D 93.250 400 22 4 201 600 497790033 497789639 7.070000e-163 584.0
71 TraesCS6D01G164100 chr7D 93.567 171 7 2 1 170 51894266 51894433 8.150000e-63 252.0
72 TraesCS6D01G164100 chr7D 91.279 172 12 3 1 169 203036680 203036509 1.060000e-56 231.0
73 TraesCS6D01G164100 chr7D 89.516 124 4 2 598 712 497789080 497788957 1.100000e-31 148.0
74 TraesCS6D01G164100 chrUn 85.462 1245 116 27 801 2028 164915214 164914018 0.000000e+00 1236.0
75 TraesCS6D01G164100 chrUn 85.406 1158 105 26 801 1942 332870424 332869315 0.000000e+00 1144.0
76 TraesCS6D01G164100 chr7B 92.352 876 51 7 3936 4807 202753452 202754315 0.000000e+00 1232.0
77 TraesCS6D01G164100 chr7B 84.000 250 33 6 3716 3963 426351618 426351374 2.950000e-57 233.0
78 TraesCS6D01G164100 chr7B 84.388 237 30 6 3729 3963 426343193 426342962 4.940000e-55 226.0
79 TraesCS6D01G164100 chr7A 94.317 739 31 10 4071 4803 185972561 185971828 0.000000e+00 1122.0
80 TraesCS6D01G164100 chr7A 94.278 367 18 2 1223 1586 185972938 185972572 4.290000e-155 558.0
81 TraesCS6D01G164100 chr7A 87.940 199 10 6 598 785 185973352 185973157 6.390000e-54 222.0
82 TraesCS6D01G164100 chr5B 90.148 741 60 8 2122 2861 634066038 634066766 0.000000e+00 952.0
83 TraesCS6D01G164100 chr5B 87.217 618 62 8 799 1407 634064502 634065111 0.000000e+00 688.0
84 TraesCS6D01G164100 chr5B 88.571 140 13 3 3445 3584 634069274 634069410 3.040000e-37 167.0
85 TraesCS6D01G164100 chr5B 81.013 237 16 10 3088 3310 634068893 634069114 1.410000e-35 161.0
86 TraesCS6D01G164100 chr5B 87.407 135 14 3 3450 3584 634069122 634069253 8.500000e-33 152.0
87 TraesCS6D01G164100 chr5D 91.860 172 10 4 1 170 454287541 454287710 2.280000e-58 237.0
88 TraesCS6D01G164100 chr5D 86.275 153 9 5 1 141 41813928 41814080 6.570000e-34 156.0
89 TraesCS6D01G164100 chr3D 87.500 184 8 3 1 170 560126228 560126410 1.080000e-46 198.0
90 TraesCS6D01G164100 chr3D 85.405 185 11 4 1 170 101854124 101854307 1.400000e-40 178.0
91 TraesCS6D01G164100 chr6A 86.826 167 16 6 8 170 35152082 35151918 1.080000e-41 182.0
92 TraesCS6D01G164100 chr6A 87.302 63 3 3 146 207 270742790 270742732 3.170000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G164100 chr6D 143374823 143379727 4904 False 4559.100000 9058 100.000000 1 4905 2 chr6D.!!$F1 4904
1 TraesCS6D01G164100 chr6B 431538448 431540483 2035 True 2311.000000 2311 87.285000 800 2861 1 chr6B.!!$R1 2061
2 TraesCS6D01G164100 chr4A 16450636 16452919 2283 False 842.733333 2294 93.258667 797 3010 3 chr4A.!!$F1 2213
3 TraesCS6D01G164100 chr4A 707478473 707482263 3790 False 540.414286 1362 95.059571 196 3610 7 chr4A.!!$F2 3414
4 TraesCS6D01G164100 chr1D 370521325 370522825 1500 False 815.733333 2263 94.971000 1455 3010 3 chr1D.!!$F4 1555
5 TraesCS6D01G164100 chr1D 370502154 370504547 2393 False 805.000000 998 94.044000 169 2011 3 chr1D.!!$F3 1842
6 TraesCS6D01G164100 chr1D 370353270 370357674 4404 False 773.666667 1784 92.543167 169 2011 6 chr1D.!!$F2 1842
7 TraesCS6D01G164100 chr4D 220956852 220959727 2875 False 617.250000 1762 90.035000 1259 3663 4 chr4D.!!$F1 2404
8 TraesCS6D01G164100 chr2D 429278416 429281368 2952 False 469.440000 1755 90.268200 1410 3663 5 chr2D.!!$F1 2253
9 TraesCS6D01G164100 chr2B 753103090 753103814 724 True 889.000000 889 89.098000 1496 2218 1 chr2B.!!$R2 722
10 TraesCS6D01G164100 chr2B 491060982 491062244 1262 False 887.500000 1592 92.486500 598 4803 2 chr2B.!!$F1 4205
11 TraesCS6D01G164100 chr4B 611242776 611246665 3889 False 670.366667 1544 94.609000 196 3610 6 chr4B.!!$F1 3414
12 TraesCS6D01G164100 chr4B 611283959 611284740 781 False 418.000000 424 92.773000 3009 3611 2 chr4B.!!$F2 602
13 TraesCS6D01G164100 chr3B 17633859 17636059 2200 True 1008.000000 1445 91.663500 201 4776 2 chr3B.!!$R1 4575
14 TraesCS6D01G164100 chr3B 733631440 733633662 2222 False 766.333333 1544 92.144667 203 4803 3 chr3B.!!$F4 4600
15 TraesCS6D01G164100 chr3B 691277872 691279500 1628 False 466.666667 678 91.001667 222 4237 3 chr3B.!!$F3 4015
16 TraesCS6D01G164100 chr1A 529600846 529603072 2226 False 632.300000 1526 90.754750 799 3010 4 chr1A.!!$F1 2211
17 TraesCS6D01G164100 chr7D 593970086 593971723 1637 False 931.000000 1243 88.910000 808 2861 2 chr7D.!!$F2 2053
18 TraesCS6D01G164100 chr7D 497788957 497790033 1076 True 366.000000 584 91.383000 201 712 2 chr7D.!!$R2 511
19 TraesCS6D01G164100 chrUn 164914018 164915214 1196 True 1236.000000 1236 85.462000 801 2028 1 chrUn.!!$R1 1227
20 TraesCS6D01G164100 chrUn 332869315 332870424 1109 True 1144.000000 1144 85.406000 801 1942 1 chrUn.!!$R2 1141
21 TraesCS6D01G164100 chr7B 202753452 202754315 863 False 1232.000000 1232 92.352000 3936 4807 1 chr7B.!!$F1 871
22 TraesCS6D01G164100 chr7A 185971828 185973352 1524 True 634.000000 1122 92.178333 598 4803 3 chr7A.!!$R1 4205
23 TraesCS6D01G164100 chr5B 634064502 634069410 4908 False 424.000000 952 86.871200 799 3584 5 chr5B.!!$F1 2785

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
883 1516 0.326143 TCTGCCCCCTGTACAGCATA 60.326 55.000 17.86 3.18 34.16 3.14 F
1106 1750 0.657840 CATCCCGCGATCCAAAGTTC 59.342 55.000 8.23 0.00 0.00 3.01 F
1529 2485 1.007849 CGCAGGAAACCAAAACCCG 60.008 57.895 0.00 0.00 0.00 5.28 F
2982 5728 0.625849 CCCCCTAGCTGTCACCATTT 59.374 55.000 0.00 0.00 0.00 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1849 3131 0.034670 AGAGCAACATGGAGGGAAGC 60.035 55.0 0.00 0.0 0.00 3.86 R
2957 5703 0.399091 TGACAGCTAGGGGGATGAGG 60.399 60.0 0.00 0.0 0.00 3.86 R
3339 8222 0.249120 TGGTTCATACCCACTCGCAG 59.751 55.0 0.00 0.0 44.35 5.18 R
4463 9596 0.178068 GCCCATGGACTCGCTAAGAA 59.822 55.0 15.22 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.687604 AGTGGAAAGAAAAATAAACCGATGG 58.312 36.000 0.00 0.00 0.00 3.51
25 26 6.492087 AGTGGAAAGAAAAATAAACCGATGGA 59.508 34.615 0.00 0.00 0.00 3.41
26 27 6.584942 GTGGAAAGAAAAATAAACCGATGGAC 59.415 38.462 0.00 0.00 0.00 4.02
27 28 6.097356 GGAAAGAAAAATAAACCGATGGACC 58.903 40.000 0.00 0.00 0.00 4.46
28 29 6.294843 GGAAAGAAAAATAAACCGATGGACCA 60.295 38.462 0.00 0.00 0.00 4.02
29 30 5.897377 AGAAAAATAAACCGATGGACCAG 57.103 39.130 0.00 0.00 0.00 4.00
30 31 4.705023 AGAAAAATAAACCGATGGACCAGG 59.295 41.667 0.00 0.00 0.00 4.45
31 32 2.729028 AATAAACCGATGGACCAGGG 57.271 50.000 11.84 11.84 0.00 4.45
32 33 1.591768 ATAAACCGATGGACCAGGGT 58.408 50.000 13.04 13.04 0.00 4.34
33 34 0.616371 TAAACCGATGGACCAGGGTG 59.384 55.000 18.15 1.79 31.96 4.61
34 35 2.137177 AAACCGATGGACCAGGGTGG 62.137 60.000 18.15 10.73 45.02 4.61
35 36 3.797353 CCGATGGACCAGGGTGGG 61.797 72.222 0.00 0.00 43.37 4.61
36 37 2.687200 CGATGGACCAGGGTGGGA 60.687 66.667 0.00 0.00 43.37 4.37
37 38 2.735772 CGATGGACCAGGGTGGGAG 61.736 68.421 0.00 0.00 43.37 4.30
38 39 2.286425 ATGGACCAGGGTGGGAGG 60.286 66.667 0.00 0.00 43.37 4.30
39 40 3.970363 ATGGACCAGGGTGGGAGGG 62.970 68.421 0.00 0.00 43.37 4.30
41 42 4.677151 GACCAGGGTGGGAGGGGT 62.677 72.222 0.00 0.00 43.37 4.95
48 49 4.995058 GTGGGAGGGGTGGTGGGA 62.995 72.222 0.00 0.00 0.00 4.37
49 50 4.209620 TGGGAGGGGTGGTGGGAA 62.210 66.667 0.00 0.00 0.00 3.97
50 51 3.339093 GGGAGGGGTGGTGGGAAG 61.339 72.222 0.00 0.00 0.00 3.46
51 52 2.204090 GGAGGGGTGGTGGGAAGA 60.204 66.667 0.00 0.00 0.00 2.87
52 53 2.301738 GGAGGGGTGGTGGGAAGAG 61.302 68.421 0.00 0.00 0.00 2.85
53 54 1.229529 GAGGGGTGGTGGGAAGAGA 60.230 63.158 0.00 0.00 0.00 3.10
54 55 1.229658 AGGGGTGGTGGGAAGAGAG 60.230 63.158 0.00 0.00 0.00 3.20
55 56 1.229529 GGGGTGGTGGGAAGAGAGA 60.230 63.158 0.00 0.00 0.00 3.10
56 57 1.554583 GGGGTGGTGGGAAGAGAGAC 61.555 65.000 0.00 0.00 0.00 3.36
57 58 0.836400 GGGTGGTGGGAAGAGAGACA 60.836 60.000 0.00 0.00 0.00 3.41
58 59 1.056660 GGTGGTGGGAAGAGAGACAA 58.943 55.000 0.00 0.00 0.00 3.18
59 60 1.420138 GGTGGTGGGAAGAGAGACAAA 59.580 52.381 0.00 0.00 0.00 2.83
60 61 2.158667 GGTGGTGGGAAGAGAGACAAAA 60.159 50.000 0.00 0.00 0.00 2.44
61 62 3.551846 GTGGTGGGAAGAGAGACAAAAA 58.448 45.455 0.00 0.00 0.00 1.94
81 82 4.804608 AAAACCAGCAAAAATAAACCGC 57.195 36.364 0.00 0.00 0.00 5.68
82 83 2.058913 ACCAGCAAAAATAAACCGCG 57.941 45.000 0.00 0.00 0.00 6.46
83 84 1.336424 ACCAGCAAAAATAAACCGCGG 60.336 47.619 26.86 26.86 0.00 6.46
84 85 1.068194 CCAGCAAAAATAAACCGCGGA 60.068 47.619 35.90 10.61 0.00 5.54
85 86 1.982913 CAGCAAAAATAAACCGCGGAC 59.017 47.619 35.90 7.23 0.00 4.79
86 87 1.068125 AGCAAAAATAAACCGCGGACC 60.068 47.619 35.90 6.63 0.00 4.46
87 88 1.336056 GCAAAAATAAACCGCGGACCA 60.336 47.619 35.90 16.27 0.00 4.02
88 89 2.591133 CAAAAATAAACCGCGGACCAG 58.409 47.619 35.90 4.58 0.00 4.00
89 90 1.170442 AAAATAAACCGCGGACCAGG 58.830 50.000 35.90 3.66 0.00 4.45
90 91 0.678684 AAATAAACCGCGGACCAGGG 60.679 55.000 35.90 2.75 0.00 4.45
91 92 1.844544 AATAAACCGCGGACCAGGGT 61.845 55.000 35.90 3.57 34.99 4.34
92 93 2.530958 ATAAACCGCGGACCAGGGTG 62.531 60.000 35.90 0.93 33.47 4.61
98 99 4.715130 CGGACCAGGGTGGGAGGA 62.715 72.222 0.00 0.00 43.37 3.71
99 100 2.689034 GGACCAGGGTGGGAGGAG 60.689 72.222 0.00 0.00 43.37 3.69
100 101 2.450243 GACCAGGGTGGGAGGAGA 59.550 66.667 0.00 0.00 43.37 3.71
101 102 1.687493 GACCAGGGTGGGAGGAGAG 60.687 68.421 0.00 0.00 43.37 3.20
102 103 2.169590 GACCAGGGTGGGAGGAGAGA 62.170 65.000 0.00 0.00 43.37 3.10
103 104 1.316266 CCAGGGTGGGAGGAGAGAT 59.684 63.158 0.00 0.00 32.67 2.75
104 105 1.053264 CCAGGGTGGGAGGAGAGATG 61.053 65.000 0.00 0.00 32.67 2.90
105 106 1.053264 CAGGGTGGGAGGAGAGATGG 61.053 65.000 0.00 0.00 0.00 3.51
106 107 1.231751 AGGGTGGGAGGAGAGATGGA 61.232 60.000 0.00 0.00 0.00 3.41
107 108 0.326618 GGGTGGGAGGAGAGATGGAA 60.327 60.000 0.00 0.00 0.00 3.53
108 109 1.584724 GGTGGGAGGAGAGATGGAAA 58.415 55.000 0.00 0.00 0.00 3.13
109 110 1.916181 GGTGGGAGGAGAGATGGAAAA 59.084 52.381 0.00 0.00 0.00 2.29
110 111 2.308866 GGTGGGAGGAGAGATGGAAAAA 59.691 50.000 0.00 0.00 0.00 1.94
132 133 4.901866 AAACCAGCAAAAATAAATCGCG 57.098 36.364 0.00 0.00 0.00 5.87
133 134 2.874849 ACCAGCAAAAATAAATCGCGG 58.125 42.857 6.13 0.00 0.00 6.46
134 135 2.490115 ACCAGCAAAAATAAATCGCGGA 59.510 40.909 6.13 0.00 0.00 5.54
135 136 3.108144 CCAGCAAAAATAAATCGCGGAG 58.892 45.455 6.13 0.00 0.00 4.63
136 137 3.181501 CCAGCAAAAATAAATCGCGGAGA 60.182 43.478 6.13 0.00 0.00 3.71
137 138 3.786048 CAGCAAAAATAAATCGCGGAGAC 59.214 43.478 6.13 0.00 0.00 3.36
151 152 1.630148 GGAGACGATTCACCAACTCG 58.370 55.000 0.00 0.00 38.34 4.18
154 155 3.509388 ACGATTCACCAACTCGTCC 57.491 52.632 0.00 0.00 41.42 4.79
155 156 0.677288 ACGATTCACCAACTCGTCCA 59.323 50.000 0.00 0.00 41.42 4.02
156 157 1.275291 ACGATTCACCAACTCGTCCAT 59.725 47.619 0.00 0.00 41.42 3.41
157 158 2.289444 ACGATTCACCAACTCGTCCATT 60.289 45.455 0.00 0.00 41.42 3.16
158 159 3.056393 ACGATTCACCAACTCGTCCATTA 60.056 43.478 0.00 0.00 41.42 1.90
159 160 3.551890 CGATTCACCAACTCGTCCATTAG 59.448 47.826 0.00 0.00 0.00 1.73
160 161 3.328382 TTCACCAACTCGTCCATTAGG 57.672 47.619 0.00 0.00 0.00 2.69
161 162 2.531771 TCACCAACTCGTCCATTAGGA 58.468 47.619 0.00 0.00 43.21 2.94
162 163 2.496070 TCACCAACTCGTCCATTAGGAG 59.504 50.000 0.00 0.00 46.92 3.69
171 172 5.050126 TCGTCCATTAGGAGTAGAGATGT 57.950 43.478 0.00 0.00 46.92 3.06
199 200 2.502130 TGGTGAATAGCATCCACGGTTA 59.498 45.455 0.00 0.00 0.00 2.85
310 318 4.866508 TCAGAACTTTCCATACTGACGT 57.133 40.909 0.00 0.00 33.57 4.34
460 468 5.710567 CGTGGATCTCCTAACCAGATATGTA 59.289 44.000 0.00 0.00 36.82 2.29
587 596 1.605058 GCTACCCTCTCCACTTCGCA 61.605 60.000 0.00 0.00 0.00 5.10
655 1243 3.575687 CTCTTTCCTTTGCCCTCACATTT 59.424 43.478 0.00 0.00 0.00 2.32
778 1366 5.240403 ACGTTAGTCTCTTCGTCTAACCTTT 59.760 40.000 0.00 0.00 39.82 3.11
779 1367 5.794448 CGTTAGTCTCTTCGTCTAACCTTTC 59.206 44.000 0.00 0.00 39.82 2.62
883 1516 0.326143 TCTGCCCCCTGTACAGCATA 60.326 55.000 17.86 3.18 34.16 3.14
884 1517 0.767375 CTGCCCCCTGTACAGCATAT 59.233 55.000 17.86 0.00 34.16 1.78
1106 1750 0.657840 CATCCCGCGATCCAAAGTTC 59.342 55.000 8.23 0.00 0.00 3.01
1115 1759 1.555533 GATCCAAAGTTCCCCTCGTCT 59.444 52.381 0.00 0.00 0.00 4.18
1120 1764 3.459063 GTTCCCCTCGTCTCCGGG 61.459 72.222 0.00 0.00 40.29 5.73
1123 1767 4.444081 CCCCTCGTCTCCGGGTCT 62.444 72.222 0.00 0.00 38.88 3.85
1274 1922 4.326826 AGGAGAAAGCAATCGAACATGAA 58.673 39.130 0.00 0.00 0.00 2.57
1379 2042 2.559668 TCGTGTTCTTGGTACGATTCCT 59.440 45.455 0.00 0.00 41.33 3.36
1451 2401 8.985315 TCTTTCTACGTTGTAAGGATAGGATA 57.015 34.615 14.26 0.00 0.00 2.59
1529 2485 1.007849 CGCAGGAAACCAAAACCCG 60.008 57.895 0.00 0.00 0.00 5.28
1578 2688 4.105697 GGTATCCAGGGAAAATATGGTGGA 59.894 45.833 0.00 0.00 38.43 4.02
1849 3131 5.123502 CAGGAAGCCTATGCATAAGCTTATG 59.876 44.000 32.48 33.05 45.20 1.90
1899 3185 8.706322 ATGGTTTGGTGAATTAGTTACTTCTT 57.294 30.769 0.00 0.00 0.00 2.52
1963 3250 9.961264 AAGAATCACATATCATAGCATCATCTT 57.039 29.630 0.00 0.00 0.00 2.40
2056 3355 9.482175 AGAGACACATATTCTAGAAGTTTAGGT 57.518 33.333 11.53 3.89 0.00 3.08
2057 3356 9.522804 GAGACACATATTCTAGAAGTTTAGGTG 57.477 37.037 20.01 20.01 0.00 4.00
2058 3357 7.982354 AGACACATATTCTAGAAGTTTAGGTGC 59.018 37.037 20.92 15.87 0.00 5.01
2059 3358 7.620880 ACACATATTCTAGAAGTTTAGGTGCA 58.379 34.615 20.92 0.00 0.00 4.57
2060 3359 7.766278 ACACATATTCTAGAAGTTTAGGTGCAG 59.234 37.037 20.92 6.52 0.00 4.41
2104 3562 1.991264 CTCGTTCTCACATGCAGTCTG 59.009 52.381 0.00 0.00 0.00 3.51
2146 3604 4.397103 GTGATGATTGCAGAATTCCAGTCA 59.603 41.667 10.71 10.71 33.24 3.41
2298 4719 3.866651 CCATCCCACTTCAGTAGTTGAG 58.133 50.000 0.00 0.00 37.07 3.02
2299 4720 3.265791 CATCCCACTTCAGTAGTTGAGC 58.734 50.000 0.00 0.00 37.07 4.26
2424 4848 1.836802 AGGATGCTCCTCTTCCTTCAC 59.163 52.381 0.00 0.00 45.66 3.18
2448 4886 4.271049 TGACTGCTTCTCGTTTTTCTCTTG 59.729 41.667 0.00 0.00 0.00 3.02
2592 5030 2.623416 GTTAGCTTTGTGGCCAGAAAGT 59.377 45.455 40.09 31.44 41.90 2.66
2668 5123 7.382110 TGCTACATCATTAGAGCTTATTCCTC 58.618 38.462 0.00 0.00 35.89 3.71
2670 5125 8.744652 GCTACATCATTAGAGCTTATTCCTCTA 58.255 37.037 0.00 0.00 40.08 2.43
2896 5640 4.814771 GGGTACTGTATACAGAACCAATGC 59.185 45.833 34.16 16.67 46.59 3.56
2940 5684 9.834628 GTTCCATTATTGATTTCAAACGAGTAA 57.165 29.630 0.00 0.00 39.55 2.24
2982 5728 0.625849 CCCCCTAGCTGTCACCATTT 59.374 55.000 0.00 0.00 0.00 2.32
2984 5730 2.094675 CCCCTAGCTGTCACCATTTTG 58.905 52.381 0.00 0.00 0.00 2.44
2985 5731 2.290896 CCCCTAGCTGTCACCATTTTGA 60.291 50.000 0.00 0.00 0.00 2.69
2986 5732 3.624777 CCCTAGCTGTCACCATTTTGAT 58.375 45.455 0.00 0.00 0.00 2.57
2990 5736 6.322201 CCCTAGCTGTCACCATTTTGATTATT 59.678 38.462 0.00 0.00 0.00 1.40
2992 5738 7.703621 CCTAGCTGTCACCATTTTGATTATTTG 59.296 37.037 0.00 0.00 0.00 2.32
2993 5739 7.230849 AGCTGTCACCATTTTGATTATTTGA 57.769 32.000 0.00 0.00 0.00 2.69
2994 5740 7.844009 AGCTGTCACCATTTTGATTATTTGAT 58.156 30.769 0.00 0.00 0.00 2.57
2996 5742 8.938906 GCTGTCACCATTTTGATTATTTGATTT 58.061 29.630 0.00 0.00 0.00 2.17
3033 7670 5.904362 ATGTAGTCAATCTTTTTGAGGGC 57.096 39.130 0.00 0.00 0.00 5.19
3041 7678 7.015584 AGTCAATCTTTTTGAGGGCAAATACTT 59.984 33.333 0.00 0.00 43.07 2.24
3076 7713 0.704664 GTCCAAGGAAGACCCCCAAT 59.295 55.000 0.00 0.00 36.73 3.16
3120 7757 2.517127 AGCTGGATTGAGGAATTGGGAT 59.483 45.455 0.00 0.00 0.00 3.85
3135 7772 8.221251 AGGAATTGGGATAAGACCTAGAAATTC 58.779 37.037 0.00 0.00 0.00 2.17
3195 7832 8.518720 TTCTATCTATCCATGTATTTGGGGAA 57.481 34.615 0.00 0.00 37.37 3.97
3196 7833 8.518720 TCTATCTATCCATGTATTTGGGGAAA 57.481 34.615 0.00 0.00 37.37 3.13
3357 8343 0.535335 TCTGCGAGTGGGTATGAACC 59.465 55.000 0.00 0.00 45.97 3.62
3385 8371 0.389025 GTTGTTCAACTTGCTGGGGG 59.611 55.000 8.23 0.00 0.00 5.40
3396 8383 2.863988 CTGGGGGTTGAAGGGGGT 60.864 66.667 0.00 0.00 0.00 4.95
3402 8389 1.781001 GGTTGAAGGGGGTTGGGAT 59.219 57.895 0.00 0.00 0.00 3.85
3485 8472 4.437682 TCAAACAATCCCTCAAGAGTGT 57.562 40.909 0.00 0.00 46.28 3.55
3546 8535 9.570488 AAACTACATAAAGAGTGATCTAACGTC 57.430 33.333 0.00 0.00 0.00 4.34
3594 8583 9.918630 CCAAACAAGAAAAATAATGATCTCACT 57.081 29.630 0.00 0.00 0.00 3.41
3628 8617 9.929180 ATATATATAGACATTGTTGCTTGACGT 57.071 29.630 0.00 0.00 0.00 4.34
3629 8618 4.668576 ATAGACATTGTTGCTTGACGTG 57.331 40.909 0.00 0.00 0.00 4.49
3630 8619 1.002468 AGACATTGTTGCTTGACGTGC 60.002 47.619 0.00 0.00 0.00 5.34
3631 8620 0.737804 ACATTGTTGCTTGACGTGCA 59.262 45.000 0.00 0.00 38.80 4.57
3632 8621 1.133982 ACATTGTTGCTTGACGTGCAA 59.866 42.857 7.62 7.62 46.48 4.08
3646 8635 6.662414 TGACGTGCAAGAATATCCTAAAAG 57.338 37.500 6.65 0.00 0.00 2.27
3647 8636 6.170506 TGACGTGCAAGAATATCCTAAAAGT 58.829 36.000 6.65 0.00 0.00 2.66
3648 8637 7.324935 TGACGTGCAAGAATATCCTAAAAGTA 58.675 34.615 6.65 0.00 0.00 2.24
3649 8638 7.985184 TGACGTGCAAGAATATCCTAAAAGTAT 59.015 33.333 6.65 0.00 0.00 2.12
3650 8639 9.472361 GACGTGCAAGAATATCCTAAAAGTATA 57.528 33.333 6.65 0.00 0.00 1.47
3651 8640 9.998106 ACGTGCAAGAATATCCTAAAAGTATAT 57.002 29.630 6.65 0.00 0.00 0.86
3673 8662 8.791327 ATATGTGATACGATTAATTCATGGCA 57.209 30.769 0.00 0.00 0.00 4.92
3674 8663 6.934048 TGTGATACGATTAATTCATGGCAA 57.066 33.333 0.00 0.00 0.00 4.52
3675 8664 7.509141 TGTGATACGATTAATTCATGGCAAT 57.491 32.000 0.00 0.00 0.00 3.56
3676 8665 7.361894 TGTGATACGATTAATTCATGGCAATG 58.638 34.615 0.00 0.00 34.88 2.82
3677 8666 6.306356 GTGATACGATTAATTCATGGCAATGC 59.694 38.462 0.00 0.00 33.47 3.56
3678 8667 4.652421 ACGATTAATTCATGGCAATGCA 57.348 36.364 7.79 0.00 33.47 3.96
3679 8668 4.362279 ACGATTAATTCATGGCAATGCAC 58.638 39.130 7.79 0.00 33.47 4.57
3680 8669 3.422876 CGATTAATTCATGGCAATGCACG 59.577 43.478 7.79 0.00 33.47 5.34
3681 8670 2.867287 TAATTCATGGCAATGCACGG 57.133 45.000 7.79 0.00 33.47 4.94
3682 8671 0.176219 AATTCATGGCAATGCACGGG 59.824 50.000 7.79 0.00 33.47 5.28
3683 8672 0.683828 ATTCATGGCAATGCACGGGA 60.684 50.000 7.79 0.00 33.47 5.14
3684 8673 0.897401 TTCATGGCAATGCACGGGAA 60.897 50.000 7.79 2.19 33.47 3.97
3685 8674 0.897401 TCATGGCAATGCACGGGAAA 60.897 50.000 7.79 0.00 33.47 3.13
3686 8675 0.176219 CATGGCAATGCACGGGAAAT 59.824 50.000 7.79 0.00 0.00 2.17
3687 8676 0.903942 ATGGCAATGCACGGGAAATT 59.096 45.000 7.79 0.00 0.00 1.82
3688 8677 1.550327 TGGCAATGCACGGGAAATTA 58.450 45.000 7.79 0.00 0.00 1.40
3689 8678 1.895798 TGGCAATGCACGGGAAATTAA 59.104 42.857 7.79 0.00 0.00 1.40
3690 8679 2.267426 GGCAATGCACGGGAAATTAAC 58.733 47.619 7.79 0.00 0.00 2.01
3691 8680 2.094234 GGCAATGCACGGGAAATTAACT 60.094 45.455 7.79 0.00 0.00 2.24
3692 8681 3.129638 GGCAATGCACGGGAAATTAACTA 59.870 43.478 7.79 0.00 0.00 2.24
3693 8682 4.202111 GGCAATGCACGGGAAATTAACTAT 60.202 41.667 7.79 0.00 0.00 2.12
3694 8683 5.348164 GCAATGCACGGGAAATTAACTATT 58.652 37.500 0.00 0.00 0.00 1.73
3695 8684 5.231991 GCAATGCACGGGAAATTAACTATTG 59.768 40.000 0.00 0.00 0.00 1.90
3696 8685 6.329496 CAATGCACGGGAAATTAACTATTGT 58.671 36.000 0.00 0.00 0.00 2.71
3697 8686 5.968528 TGCACGGGAAATTAACTATTGTT 57.031 34.783 0.00 0.00 39.98 2.83
3698 8687 7.633193 ATGCACGGGAAATTAACTATTGTTA 57.367 32.000 0.00 0.00 37.59 2.41
3699 8688 7.079182 TGCACGGGAAATTAACTATTGTTAG 57.921 36.000 0.00 0.00 39.49 2.34
3700 8689 6.879993 TGCACGGGAAATTAACTATTGTTAGA 59.120 34.615 0.00 0.00 39.49 2.10
3701 8690 7.390996 TGCACGGGAAATTAACTATTGTTAGAA 59.609 33.333 0.00 0.00 39.49 2.10
3702 8691 8.403236 GCACGGGAAATTAACTATTGTTAGAAT 58.597 33.333 0.00 0.00 39.49 2.40
3714 8703 7.716612 ACTATTGTTAGAATAATTTGGGCAGC 58.283 34.615 0.00 0.00 0.00 5.25
3715 8704 6.796785 ATTGTTAGAATAATTTGGGCAGCT 57.203 33.333 0.00 0.00 0.00 4.24
3716 8705 5.581126 TGTTAGAATAATTTGGGCAGCTG 57.419 39.130 10.11 10.11 0.00 4.24
3717 8706 4.402155 TGTTAGAATAATTTGGGCAGCTGG 59.598 41.667 17.12 0.00 0.00 4.85
3718 8707 1.758862 AGAATAATTTGGGCAGCTGGC 59.241 47.619 30.97 30.97 43.74 4.85
3727 8716 4.400961 GCAGCTGGCCCTCGTTCT 62.401 66.667 17.12 0.00 36.11 3.01
3728 8717 2.348998 CAGCTGGCCCTCGTTCTT 59.651 61.111 5.57 0.00 0.00 2.52
3729 8718 1.302832 CAGCTGGCCCTCGTTCTTT 60.303 57.895 5.57 0.00 0.00 2.52
3730 8719 0.890996 CAGCTGGCCCTCGTTCTTTT 60.891 55.000 5.57 0.00 0.00 2.27
3731 8720 0.606673 AGCTGGCCCTCGTTCTTTTC 60.607 55.000 0.00 0.00 0.00 2.29
3732 8721 0.606673 GCTGGCCCTCGTTCTTTTCT 60.607 55.000 0.00 0.00 0.00 2.52
3733 8722 1.338769 GCTGGCCCTCGTTCTTTTCTA 60.339 52.381 0.00 0.00 0.00 2.10
3734 8723 2.681097 GCTGGCCCTCGTTCTTTTCTAT 60.681 50.000 0.00 0.00 0.00 1.98
3735 8724 3.610911 CTGGCCCTCGTTCTTTTCTATT 58.389 45.455 0.00 0.00 0.00 1.73
3736 8725 4.010349 CTGGCCCTCGTTCTTTTCTATTT 58.990 43.478 0.00 0.00 0.00 1.40
3737 8726 3.756434 TGGCCCTCGTTCTTTTCTATTTG 59.244 43.478 0.00 0.00 0.00 2.32
3738 8727 4.007659 GGCCCTCGTTCTTTTCTATTTGA 58.992 43.478 0.00 0.00 0.00 2.69
3739 8728 4.457949 GGCCCTCGTTCTTTTCTATTTGAA 59.542 41.667 0.00 0.00 0.00 2.69
3740 8729 5.125578 GGCCCTCGTTCTTTTCTATTTGAAT 59.874 40.000 0.00 0.00 34.24 2.57
3741 8730 6.350194 GGCCCTCGTTCTTTTCTATTTGAATT 60.350 38.462 0.00 0.00 34.24 2.17
3742 8731 7.148137 GGCCCTCGTTCTTTTCTATTTGAATTA 60.148 37.037 0.00 0.00 34.24 1.40
3743 8732 7.910683 GCCCTCGTTCTTTTCTATTTGAATTAG 59.089 37.037 0.00 0.00 34.24 1.73
3744 8733 9.162764 CCCTCGTTCTTTTCTATTTGAATTAGA 57.837 33.333 0.00 0.00 34.24 2.10
3759 8748 9.985730 ATTTGAATTAGATTTGCTTGTTCTGAA 57.014 25.926 0.00 0.00 0.00 3.02
3760 8749 9.814899 TTTGAATTAGATTTGCTTGTTCTGAAA 57.185 25.926 0.00 0.00 0.00 2.69
3761 8750 9.985730 TTGAATTAGATTTGCTTGTTCTGAAAT 57.014 25.926 0.00 0.00 0.00 2.17
3762 8751 9.985730 TGAATTAGATTTGCTTGTTCTGAAATT 57.014 25.926 0.00 0.00 0.00 1.82
3765 8754 9.768662 ATTAGATTTGCTTGTTCTGAAATTTGT 57.231 25.926 0.00 0.00 0.00 2.83
3767 8756 8.807667 AGATTTGCTTGTTCTGAAATTTGTAG 57.192 30.769 0.00 0.00 0.00 2.74
3768 8757 7.869429 AGATTTGCTTGTTCTGAAATTTGTAGG 59.131 33.333 0.00 0.00 0.00 3.18
3769 8758 4.870363 TGCTTGTTCTGAAATTTGTAGGC 58.130 39.130 0.00 0.00 0.00 3.93
3770 8759 4.340666 TGCTTGTTCTGAAATTTGTAGGCA 59.659 37.500 0.00 0.00 0.00 4.75
3771 8760 5.010922 TGCTTGTTCTGAAATTTGTAGGCAT 59.989 36.000 0.00 0.00 0.00 4.40
3772 8761 5.346822 GCTTGTTCTGAAATTTGTAGGCATG 59.653 40.000 0.00 0.00 0.00 4.06
3773 8762 6.403866 TTGTTCTGAAATTTGTAGGCATGT 57.596 33.333 0.00 0.00 0.00 3.21
3774 8763 5.771469 TGTTCTGAAATTTGTAGGCATGTG 58.229 37.500 0.00 0.00 0.00 3.21
3775 8764 5.163513 GTTCTGAAATTTGTAGGCATGTGG 58.836 41.667 0.00 0.00 0.00 4.17
3776 8765 4.406456 TCTGAAATTTGTAGGCATGTGGT 58.594 39.130 0.00 0.00 0.00 4.16
3777 8766 4.218200 TCTGAAATTTGTAGGCATGTGGTG 59.782 41.667 0.00 0.00 0.00 4.17
3778 8767 3.894427 TGAAATTTGTAGGCATGTGGTGT 59.106 39.130 0.00 0.00 0.00 4.16
3779 8768 3.940209 AATTTGTAGGCATGTGGTGTG 57.060 42.857 0.00 0.00 0.00 3.82
3780 8769 2.356665 TTTGTAGGCATGTGGTGTGT 57.643 45.000 0.00 0.00 0.00 3.72
3781 8770 2.356665 TTGTAGGCATGTGGTGTGTT 57.643 45.000 0.00 0.00 0.00 3.32
3782 8771 1.603456 TGTAGGCATGTGGTGTGTTG 58.397 50.000 0.00 0.00 0.00 3.33
3783 8772 1.133945 TGTAGGCATGTGGTGTGTTGT 60.134 47.619 0.00 0.00 0.00 3.32
3784 8773 2.104963 TGTAGGCATGTGGTGTGTTGTA 59.895 45.455 0.00 0.00 0.00 2.41
3785 8774 2.584835 AGGCATGTGGTGTGTTGTAT 57.415 45.000 0.00 0.00 0.00 2.29
3786 8775 2.875296 AGGCATGTGGTGTGTTGTATT 58.125 42.857 0.00 0.00 0.00 1.89
3787 8776 2.557924 AGGCATGTGGTGTGTTGTATTG 59.442 45.455 0.00 0.00 0.00 1.90
3788 8777 2.556189 GGCATGTGGTGTGTTGTATTGA 59.444 45.455 0.00 0.00 0.00 2.57
3789 8778 3.193267 GGCATGTGGTGTGTTGTATTGAT 59.807 43.478 0.00 0.00 0.00 2.57
3790 8779 4.414852 GCATGTGGTGTGTTGTATTGATC 58.585 43.478 0.00 0.00 0.00 2.92
3791 8780 4.156556 GCATGTGGTGTGTTGTATTGATCT 59.843 41.667 0.00 0.00 0.00 2.75
3792 8781 5.335897 GCATGTGGTGTGTTGTATTGATCTT 60.336 40.000 0.00 0.00 0.00 2.40
3793 8782 5.687770 TGTGGTGTGTTGTATTGATCTTG 57.312 39.130 0.00 0.00 0.00 3.02
3794 8783 4.518590 TGTGGTGTGTTGTATTGATCTTGG 59.481 41.667 0.00 0.00 0.00 3.61
3795 8784 4.518970 GTGGTGTGTTGTATTGATCTTGGT 59.481 41.667 0.00 0.00 0.00 3.67
3796 8785 4.759693 TGGTGTGTTGTATTGATCTTGGTC 59.240 41.667 0.00 0.00 0.00 4.02
3797 8786 5.003804 GGTGTGTTGTATTGATCTTGGTCT 58.996 41.667 0.00 0.00 0.00 3.85
3798 8787 5.473504 GGTGTGTTGTATTGATCTTGGTCTT 59.526 40.000 0.00 0.00 0.00 3.01
3799 8788 6.373779 GTGTGTTGTATTGATCTTGGTCTTG 58.626 40.000 0.00 0.00 0.00 3.02
3800 8789 6.017109 GTGTGTTGTATTGATCTTGGTCTTGT 60.017 38.462 0.00 0.00 0.00 3.16
3801 8790 6.545666 TGTGTTGTATTGATCTTGGTCTTGTT 59.454 34.615 0.00 0.00 0.00 2.83
3802 8791 7.068103 TGTGTTGTATTGATCTTGGTCTTGTTT 59.932 33.333 0.00 0.00 0.00 2.83
3803 8792 7.379529 GTGTTGTATTGATCTTGGTCTTGTTTG 59.620 37.037 0.00 0.00 0.00 2.93
3804 8793 7.068103 TGTTGTATTGATCTTGGTCTTGTTTGT 59.932 33.333 0.00 0.00 0.00 2.83
3805 8794 7.581213 TGTATTGATCTTGGTCTTGTTTGTT 57.419 32.000 0.00 0.00 0.00 2.83
3806 8795 7.424803 TGTATTGATCTTGGTCTTGTTTGTTG 58.575 34.615 0.00 0.00 0.00 3.33
3807 8796 4.305989 TGATCTTGGTCTTGTTTGTTGC 57.694 40.909 0.00 0.00 0.00 4.17
3808 8797 3.698539 TGATCTTGGTCTTGTTTGTTGCA 59.301 39.130 0.00 0.00 0.00 4.08
3809 8798 3.781079 TCTTGGTCTTGTTTGTTGCAG 57.219 42.857 0.00 0.00 0.00 4.41
3810 8799 3.351740 TCTTGGTCTTGTTTGTTGCAGA 58.648 40.909 0.00 0.00 0.00 4.26
3811 8800 3.378112 TCTTGGTCTTGTTTGTTGCAGAG 59.622 43.478 0.00 0.00 0.00 3.35
3812 8801 2.997980 TGGTCTTGTTTGTTGCAGAGA 58.002 42.857 0.00 0.00 0.00 3.10
3813 8802 2.682856 TGGTCTTGTTTGTTGCAGAGAC 59.317 45.455 0.00 0.00 34.32 3.36
3814 8803 2.682856 GGTCTTGTTTGTTGCAGAGACA 59.317 45.455 0.00 0.00 36.21 3.41
3815 8804 3.487544 GGTCTTGTTTGTTGCAGAGACAC 60.488 47.826 0.00 0.00 36.21 3.67
3816 8805 2.682856 TCTTGTTTGTTGCAGAGACACC 59.317 45.455 0.00 0.00 0.00 4.16
3817 8806 2.418368 TGTTTGTTGCAGAGACACCT 57.582 45.000 0.00 0.00 0.00 4.00
3818 8807 2.016318 TGTTTGTTGCAGAGACACCTG 58.984 47.619 0.00 0.00 37.23 4.00
3819 8808 1.334869 GTTTGTTGCAGAGACACCTGG 59.665 52.381 0.00 0.00 34.82 4.45
3820 8809 0.819259 TTGTTGCAGAGACACCTGGC 60.819 55.000 0.00 0.00 34.82 4.85
3821 8810 2.031012 TTGCAGAGACACCTGGCG 59.969 61.111 0.00 0.00 34.82 5.69
3822 8811 2.506957 TTGCAGAGACACCTGGCGA 61.507 57.895 0.00 0.00 34.82 5.54
3823 8812 1.830587 TTGCAGAGACACCTGGCGAT 61.831 55.000 0.00 0.00 34.82 4.58
3824 8813 1.812922 GCAGAGACACCTGGCGATG 60.813 63.158 0.00 0.00 34.82 3.84
3825 8814 1.593787 CAGAGACACCTGGCGATGT 59.406 57.895 0.00 0.00 0.00 3.06
3826 8815 0.817654 CAGAGACACCTGGCGATGTA 59.182 55.000 0.00 0.00 0.00 2.29
3827 8816 1.410517 CAGAGACACCTGGCGATGTAT 59.589 52.381 0.00 0.00 0.00 2.29
3828 8817 1.683917 AGAGACACCTGGCGATGTATC 59.316 52.381 3.17 3.17 37.33 2.24
3842 8831 4.981389 GATGTATCGAAATCTGTCCTGC 57.019 45.455 0.00 0.00 0.00 4.85
3843 8832 3.885724 TGTATCGAAATCTGTCCTGCA 57.114 42.857 0.00 0.00 0.00 4.41
3844 8833 4.406648 TGTATCGAAATCTGTCCTGCAT 57.593 40.909 0.00 0.00 0.00 3.96
3856 8845 3.466836 TGTCCTGCATAATAAAGGAGCG 58.533 45.455 0.00 0.00 40.76 5.03
3866 8855 1.485124 TAAAGGAGCGCTGAGGATGA 58.515 50.000 18.48 0.00 0.00 2.92
3895 8884 3.193903 TCATGTTGGTTTGGATGATGCTG 59.806 43.478 0.00 0.00 0.00 4.41
3915 8904 1.672145 GGTTCGGTAGTGTGGCTTCTC 60.672 57.143 0.00 0.00 0.00 2.87
3916 8905 1.272769 GTTCGGTAGTGTGGCTTCTCT 59.727 52.381 0.00 0.00 0.00 3.10
3925 8914 2.675348 GTGTGGCTTCTCTTATGTCAGC 59.325 50.000 0.00 0.00 0.00 4.26
3927 8916 2.935201 GTGGCTTCTCTTATGTCAGCTG 59.065 50.000 7.63 7.63 0.00 4.24
3928 8917 1.939255 GGCTTCTCTTATGTCAGCTGC 59.061 52.381 9.47 4.92 0.00 5.25
3929 8918 2.625737 GCTTCTCTTATGTCAGCTGCA 58.374 47.619 9.47 11.14 0.00 4.41
3931 8920 3.181512 GCTTCTCTTATGTCAGCTGCAAC 60.182 47.826 9.47 3.37 0.00 4.17
3933 8922 2.568956 TCTCTTATGTCAGCTGCAACCT 59.431 45.455 9.47 0.00 0.00 3.50
3934 8923 3.008375 TCTCTTATGTCAGCTGCAACCTT 59.992 43.478 9.47 0.00 0.00 3.50
3969 8958 0.027194 CGCTGATTCTCCACATTGCG 59.973 55.000 0.00 0.00 36.41 4.85
4007 8996 2.547007 CGGTTAGGTGTGATGTGTGTCA 60.547 50.000 0.00 0.00 0.00 3.58
4063 9052 1.445871 TGCTTGTGACAGCATGCTAG 58.554 50.000 22.19 16.90 45.14 3.42
4064 9053 0.731417 GCTTGTGACAGCATGCTAGG 59.269 55.000 22.19 12.00 42.53 3.02
4065 9054 1.947678 GCTTGTGACAGCATGCTAGGT 60.948 52.381 22.19 15.64 42.53 3.08
4066 9055 2.677902 GCTTGTGACAGCATGCTAGGTA 60.678 50.000 22.19 4.38 42.53 3.08
4067 9056 3.599343 CTTGTGACAGCATGCTAGGTAA 58.401 45.455 22.19 5.40 42.53 2.85
4068 9057 3.912496 TGTGACAGCATGCTAGGTAAT 57.088 42.857 22.19 1.48 42.53 1.89
4145 9137 5.466728 ACGACAATACTTCATATGATGTGGC 59.533 40.000 26.41 15.46 34.74 5.01
4173 9165 4.590918 TGTTAATTGGGAATTCAGCCGTA 58.409 39.130 7.93 0.00 32.38 4.02
4230 9222 6.208007 TGCATCAAATAGCCTCATAAATCTGG 59.792 38.462 0.00 0.00 0.00 3.86
4507 9640 1.339631 CCGTACCCATTTCTTGCCTGA 60.340 52.381 0.00 0.00 0.00 3.86
4557 9690 3.700538 TGCCTTCCATTCTTTGCTACAT 58.299 40.909 0.00 0.00 0.00 2.29
4701 9836 3.323691 AGTGTTTTGGGATTGTTAAGGGC 59.676 43.478 0.00 0.00 0.00 5.19
4706 9841 1.093496 GGGATTGTTAAGGGCCGTCG 61.093 60.000 0.00 0.00 0.00 5.12
4765 9900 8.903570 TTCAACACTAACACTTGTAACATTTG 57.096 30.769 0.00 0.00 0.00 2.32
4784 9919 8.877864 ACATTTGAACTCTTTATGATACCCAA 57.122 30.769 0.00 0.00 0.00 4.12
4803 9938 1.075600 GTGGGAGGGAGGGAGAGAG 60.076 68.421 0.00 0.00 0.00 3.20
4807 9942 0.478507 GGAGGGAGGGAGAGAGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
4808 9943 1.518367 GAGGGAGGGAGAGAGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
4809 9944 1.421646 GAGGGAGGGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
4810 9945 1.010793 AGGGAGGGAGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
4811 9946 1.421646 GGGAGGGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
4812 9947 2.408565 GGAGGGAGAGAGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
4813 9948 2.370189 GGAGGGAGAGAGAGAGAGAGAG 59.630 59.091 0.00 0.00 0.00 3.20
4814 9949 2.370189 GAGGGAGAGAGAGAGAGAGAGG 59.630 59.091 0.00 0.00 0.00 3.69
4815 9950 1.421646 GGGAGAGAGAGAGAGAGAGGG 59.578 61.905 0.00 0.00 0.00 4.30
4816 9951 2.408565 GGAGAGAGAGAGAGAGAGGGA 58.591 57.143 0.00 0.00 0.00 4.20
4817 9952 2.370189 GGAGAGAGAGAGAGAGAGGGAG 59.630 59.091 0.00 0.00 0.00 4.30
4818 9953 2.370189 GAGAGAGAGAGAGAGAGGGAGG 59.630 59.091 0.00 0.00 0.00 4.30
4819 9954 1.421646 GAGAGAGAGAGAGAGGGAGGG 59.578 61.905 0.00 0.00 0.00 4.30
4820 9955 1.010793 AGAGAGAGAGAGAGGGAGGGA 59.989 57.143 0.00 0.00 0.00 4.20
4821 9956 1.421646 GAGAGAGAGAGAGGGAGGGAG 59.578 61.905 0.00 0.00 0.00 4.30
4822 9957 0.478507 GAGAGAGAGAGGGAGGGAGG 59.521 65.000 0.00 0.00 0.00 4.30
4823 9958 0.998945 AGAGAGAGAGGGAGGGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
4824 9959 0.996762 GAGAGAGAGGGAGGGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
4825 9960 0.998945 AGAGAGAGGGAGGGAGGGAG 60.999 65.000 0.00 0.00 0.00 4.30
4826 9961 2.018086 AGAGAGGGAGGGAGGGAGG 61.018 68.421 0.00 0.00 0.00 4.30
4827 9962 3.039526 AGAGGGAGGGAGGGAGGG 61.040 72.222 0.00 0.00 0.00 4.30
4828 9963 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
4829 9964 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
4830 9965 4.179599 GGGAGGGAGGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
4831 9966 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
4832 9967 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
4833 9968 3.039526 AGGGAGGGAGGGAGGGAG 61.040 72.222 0.00 0.00 0.00 4.30
4834 9969 3.036959 GGGAGGGAGGGAGGGAGA 61.037 72.222 0.00 0.00 0.00 3.71
4835 9970 2.612251 GGAGGGAGGGAGGGAGAG 59.388 72.222 0.00 0.00 0.00 3.20
4836 9971 2.015726 GGAGGGAGGGAGGGAGAGA 61.016 68.421 0.00 0.00 0.00 3.10
4837 9972 1.376249 GGAGGGAGGGAGGGAGAGAT 61.376 65.000 0.00 0.00 0.00 2.75
4838 9973 0.178935 GAGGGAGGGAGGGAGAGATG 60.179 65.000 0.00 0.00 0.00 2.90
4839 9974 1.152139 GGGAGGGAGGGAGAGATGG 60.152 68.421 0.00 0.00 0.00 3.51
4840 9975 1.669927 GGGAGGGAGGGAGAGATGGA 61.670 65.000 0.00 0.00 0.00 3.41
4841 9976 0.491371 GGAGGGAGGGAGAGATGGAT 59.509 60.000 0.00 0.00 0.00 3.41
4842 9977 1.643310 GAGGGAGGGAGAGATGGATG 58.357 60.000 0.00 0.00 0.00 3.51
4843 9978 0.193069 AGGGAGGGAGAGATGGATGG 59.807 60.000 0.00 0.00 0.00 3.51
4844 9979 0.839853 GGGAGGGAGAGATGGATGGG 60.840 65.000 0.00 0.00 0.00 4.00
4845 9980 0.839853 GGAGGGAGAGATGGATGGGG 60.840 65.000 0.00 0.00 0.00 4.96
4846 9981 0.192064 GAGGGAGAGATGGATGGGGA 59.808 60.000 0.00 0.00 0.00 4.81
4847 9982 0.880357 AGGGAGAGATGGATGGGGAT 59.120 55.000 0.00 0.00 0.00 3.85
4848 9983 1.203415 AGGGAGAGATGGATGGGGATC 60.203 57.143 0.00 0.00 0.00 3.36
4849 9984 1.485786 GGGAGAGATGGATGGGGATCA 60.486 57.143 0.00 0.00 0.00 2.92
4850 9985 2.342659 GGAGAGATGGATGGGGATCAA 58.657 52.381 0.00 0.00 0.00 2.57
4851 9986 2.713167 GGAGAGATGGATGGGGATCAAA 59.287 50.000 0.00 0.00 0.00 2.69
4852 9987 3.244840 GGAGAGATGGATGGGGATCAAAG 60.245 52.174 0.00 0.00 0.00 2.77
4853 9988 2.715336 AGAGATGGATGGGGATCAAAGG 59.285 50.000 0.00 0.00 0.00 3.11
4854 9989 2.713167 GAGATGGATGGGGATCAAAGGA 59.287 50.000 0.00 0.00 0.00 3.36
4855 9990 3.133665 AGATGGATGGGGATCAAAGGAA 58.866 45.455 0.00 0.00 0.00 3.36
4856 9991 3.139770 AGATGGATGGGGATCAAAGGAAG 59.860 47.826 0.00 0.00 0.00 3.46
4857 9992 1.570501 TGGATGGGGATCAAAGGAAGG 59.429 52.381 0.00 0.00 0.00 3.46
4858 9993 1.133356 GGATGGGGATCAAAGGAAGGG 60.133 57.143 0.00 0.00 0.00 3.95
4859 9994 1.852965 GATGGGGATCAAAGGAAGGGA 59.147 52.381 0.00 0.00 0.00 4.20
4860 9995 1.298953 TGGGGATCAAAGGAAGGGAG 58.701 55.000 0.00 0.00 0.00 4.30
4861 9996 1.203557 TGGGGATCAAAGGAAGGGAGA 60.204 52.381 0.00 0.00 0.00 3.71
4862 9997 1.492599 GGGGATCAAAGGAAGGGAGAG 59.507 57.143 0.00 0.00 0.00 3.20
4863 9998 2.482494 GGGATCAAAGGAAGGGAGAGA 58.518 52.381 0.00 0.00 0.00 3.10
4864 9999 2.437651 GGGATCAAAGGAAGGGAGAGAG 59.562 54.545 0.00 0.00 0.00 3.20
4865 10000 2.437651 GGATCAAAGGAAGGGAGAGAGG 59.562 54.545 0.00 0.00 0.00 3.69
4866 10001 1.958288 TCAAAGGAAGGGAGAGAGGG 58.042 55.000 0.00 0.00 0.00 4.30
4867 10002 0.915364 CAAAGGAAGGGAGAGAGGGG 59.085 60.000 0.00 0.00 0.00 4.79
4868 10003 0.253394 AAAGGAAGGGAGAGAGGGGG 60.253 60.000 0.00 0.00 0.00 5.40
4891 10026 8.037723 GGGGGTATCTTTACTATTAAAGGTGA 57.962 38.462 11.44 0.00 43.15 4.02
4892 10027 8.496916 GGGGGTATCTTTACTATTAAAGGTGAA 58.503 37.037 11.44 0.00 43.15 3.18
4898 10033 8.420374 TCTTTACTATTAAAGGTGAATCTGCG 57.580 34.615 11.44 0.00 43.15 5.18
4899 10034 8.255206 TCTTTACTATTAAAGGTGAATCTGCGA 58.745 33.333 11.44 0.00 43.15 5.10
4900 10035 8.958119 TTTACTATTAAAGGTGAATCTGCGAT 57.042 30.769 0.00 0.00 0.00 4.58
4902 10037 9.692749 TTACTATTAAAGGTGAATCTGCGATAG 57.307 33.333 0.00 0.00 0.00 2.08
4903 10038 7.727181 ACTATTAAAGGTGAATCTGCGATAGT 58.273 34.615 0.00 0.00 39.35 2.12
4904 10039 6.851222 ATTAAAGGTGAATCTGCGATAGTG 57.149 37.500 0.00 0.00 39.35 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 5.185056 CCTGGTCCATCGGTTTATTTTTCTT 59.815 40.000 0.00 0.00 0.00 2.52
7 8 4.705023 CCTGGTCCATCGGTTTATTTTTCT 59.295 41.667 0.00 0.00 0.00 2.52
8 9 4.142249 CCCTGGTCCATCGGTTTATTTTTC 60.142 45.833 0.00 0.00 0.00 2.29
9 10 3.767131 CCCTGGTCCATCGGTTTATTTTT 59.233 43.478 0.00 0.00 0.00 1.94
10 11 3.245479 ACCCTGGTCCATCGGTTTATTTT 60.245 43.478 5.15 0.00 0.00 1.82
11 12 2.310647 ACCCTGGTCCATCGGTTTATTT 59.689 45.455 5.15 0.00 0.00 1.40
12 13 1.920351 ACCCTGGTCCATCGGTTTATT 59.080 47.619 5.15 0.00 0.00 1.40
13 14 1.211949 CACCCTGGTCCATCGGTTTAT 59.788 52.381 7.86 0.00 0.00 1.40
14 15 0.616371 CACCCTGGTCCATCGGTTTA 59.384 55.000 7.86 0.00 0.00 2.01
15 16 1.378762 CACCCTGGTCCATCGGTTT 59.621 57.895 7.86 0.00 0.00 3.27
16 17 2.602676 CCACCCTGGTCCATCGGTT 61.603 63.158 7.86 0.00 31.35 4.44
17 18 3.009115 CCACCCTGGTCCATCGGT 61.009 66.667 5.15 5.15 31.35 4.69
18 19 3.797353 CCCACCCTGGTCCATCGG 61.797 72.222 0.00 0.00 35.17 4.18
19 20 2.687200 TCCCACCCTGGTCCATCG 60.687 66.667 0.00 0.00 35.17 3.84
20 21 2.378634 CCTCCCACCCTGGTCCATC 61.379 68.421 0.00 0.00 35.17 3.51
21 22 2.286425 CCTCCCACCCTGGTCCAT 60.286 66.667 0.00 0.00 35.17 3.41
22 23 4.675303 CCCTCCCACCCTGGTCCA 62.675 72.222 0.00 0.00 35.17 4.02
24 25 4.677151 ACCCCTCCCACCCTGGTC 62.677 72.222 0.00 0.00 35.17 4.02
31 32 4.995058 TCCCACCACCCCTCCCAC 62.995 72.222 0.00 0.00 0.00 4.61
32 33 4.209620 TTCCCACCACCCCTCCCA 62.210 66.667 0.00 0.00 0.00 4.37
33 34 3.339093 CTTCCCACCACCCCTCCC 61.339 72.222 0.00 0.00 0.00 4.30
34 35 2.204090 TCTTCCCACCACCCCTCC 60.204 66.667 0.00 0.00 0.00 4.30
35 36 1.229529 TCTCTTCCCACCACCCCTC 60.230 63.158 0.00 0.00 0.00 4.30
36 37 1.229658 CTCTCTTCCCACCACCCCT 60.230 63.158 0.00 0.00 0.00 4.79
37 38 1.229529 TCTCTCTTCCCACCACCCC 60.230 63.158 0.00 0.00 0.00 4.95
38 39 0.836400 TGTCTCTCTTCCCACCACCC 60.836 60.000 0.00 0.00 0.00 4.61
39 40 1.056660 TTGTCTCTCTTCCCACCACC 58.943 55.000 0.00 0.00 0.00 4.61
40 41 2.930826 TTTGTCTCTCTTCCCACCAC 57.069 50.000 0.00 0.00 0.00 4.16
41 42 3.943671 TTTTTGTCTCTCTTCCCACCA 57.056 42.857 0.00 0.00 0.00 4.17
59 60 4.260415 CGCGGTTTATTTTTGCTGGTTTTT 60.260 37.500 0.00 0.00 0.00 1.94
60 61 3.246463 CGCGGTTTATTTTTGCTGGTTTT 59.754 39.130 0.00 0.00 0.00 2.43
61 62 2.797719 CGCGGTTTATTTTTGCTGGTTT 59.202 40.909 0.00 0.00 0.00 3.27
62 63 2.399448 CGCGGTTTATTTTTGCTGGTT 58.601 42.857 0.00 0.00 0.00 3.67
63 64 1.336424 CCGCGGTTTATTTTTGCTGGT 60.336 47.619 19.50 0.00 0.00 4.00
64 65 1.068194 TCCGCGGTTTATTTTTGCTGG 60.068 47.619 27.15 0.00 0.00 4.85
65 66 1.982913 GTCCGCGGTTTATTTTTGCTG 59.017 47.619 27.15 0.00 0.00 4.41
66 67 1.068125 GGTCCGCGGTTTATTTTTGCT 60.068 47.619 27.15 0.00 0.00 3.91
67 68 1.336056 TGGTCCGCGGTTTATTTTTGC 60.336 47.619 27.15 3.59 0.00 3.68
68 69 2.591133 CTGGTCCGCGGTTTATTTTTG 58.409 47.619 27.15 3.26 0.00 2.44
69 70 1.542472 CCTGGTCCGCGGTTTATTTTT 59.458 47.619 27.15 0.00 0.00 1.94
70 71 1.170442 CCTGGTCCGCGGTTTATTTT 58.830 50.000 27.15 0.00 0.00 1.82
71 72 0.678684 CCCTGGTCCGCGGTTTATTT 60.679 55.000 27.15 0.00 0.00 1.40
72 73 1.078001 CCCTGGTCCGCGGTTTATT 60.078 57.895 27.15 0.00 0.00 1.40
73 74 2.295602 ACCCTGGTCCGCGGTTTAT 61.296 57.895 27.15 2.42 0.00 1.40
74 75 2.924101 ACCCTGGTCCGCGGTTTA 60.924 61.111 27.15 11.33 0.00 2.01
75 76 4.636435 CACCCTGGTCCGCGGTTT 62.636 66.667 27.15 0.00 0.00 3.27
81 82 4.715130 TCCTCCCACCCTGGTCCG 62.715 72.222 0.00 0.00 35.17 4.79
82 83 2.689034 CTCCTCCCACCCTGGTCC 60.689 72.222 0.00 0.00 35.17 4.46
83 84 1.687493 CTCTCCTCCCACCCTGGTC 60.687 68.421 0.00 0.00 35.17 4.02
84 85 1.531981 ATCTCTCCTCCCACCCTGGT 61.532 60.000 0.00 0.00 35.17 4.00
85 86 1.053264 CATCTCTCCTCCCACCCTGG 61.053 65.000 0.00 0.00 37.25 4.45
86 87 1.053264 CCATCTCTCCTCCCACCCTG 61.053 65.000 0.00 0.00 0.00 4.45
87 88 1.231751 TCCATCTCTCCTCCCACCCT 61.232 60.000 0.00 0.00 0.00 4.34
88 89 0.326618 TTCCATCTCTCCTCCCACCC 60.327 60.000 0.00 0.00 0.00 4.61
89 90 1.584724 TTTCCATCTCTCCTCCCACC 58.415 55.000 0.00 0.00 0.00 4.61
90 91 3.721087 TTTTTCCATCTCTCCTCCCAC 57.279 47.619 0.00 0.00 0.00 4.61
109 110 5.333721 CCGCGATTTATTTTTGCTGGTTTTT 60.334 36.000 8.23 0.00 0.00 1.94
110 111 4.151512 CCGCGATTTATTTTTGCTGGTTTT 59.848 37.500 8.23 0.00 0.00 2.43
111 112 3.677596 CCGCGATTTATTTTTGCTGGTTT 59.322 39.130 8.23 0.00 0.00 3.27
112 113 3.057174 TCCGCGATTTATTTTTGCTGGTT 60.057 39.130 8.23 0.00 0.00 3.67
113 114 2.490115 TCCGCGATTTATTTTTGCTGGT 59.510 40.909 8.23 0.00 0.00 4.00
114 115 3.108144 CTCCGCGATTTATTTTTGCTGG 58.892 45.455 8.23 0.00 0.00 4.85
115 116 3.786048 GTCTCCGCGATTTATTTTTGCTG 59.214 43.478 8.23 0.00 0.00 4.41
116 117 3.485216 CGTCTCCGCGATTTATTTTTGCT 60.485 43.478 8.23 0.00 0.00 3.91
117 118 2.776225 CGTCTCCGCGATTTATTTTTGC 59.224 45.455 8.23 0.00 0.00 3.68
118 119 4.253352 TCGTCTCCGCGATTTATTTTTG 57.747 40.909 8.23 0.00 35.83 2.44
128 129 1.868987 TTGGTGAATCGTCTCCGCGA 61.869 55.000 8.23 0.00 45.32 5.87
129 130 1.445410 TTGGTGAATCGTCTCCGCG 60.445 57.895 0.00 0.00 39.83 6.46
130 131 0.389948 AGTTGGTGAATCGTCTCCGC 60.390 55.000 0.00 0.00 39.83 5.54
131 132 1.630148 GAGTTGGTGAATCGTCTCCG 58.370 55.000 0.00 0.00 39.83 4.63
132 133 1.067776 ACGAGTTGGTGAATCGTCTCC 60.068 52.381 0.00 0.00 45.92 3.71
133 134 2.349297 ACGAGTTGGTGAATCGTCTC 57.651 50.000 0.00 0.00 45.92 3.36
137 138 2.010145 ATGGACGAGTTGGTGAATCG 57.990 50.000 0.00 0.00 42.04 3.34
138 139 3.871594 CCTAATGGACGAGTTGGTGAATC 59.128 47.826 0.00 0.00 34.57 2.52
139 140 3.517901 TCCTAATGGACGAGTTGGTGAAT 59.482 43.478 0.00 0.00 37.46 2.57
140 141 2.901192 TCCTAATGGACGAGTTGGTGAA 59.099 45.455 0.00 0.00 37.46 3.18
141 142 2.496070 CTCCTAATGGACGAGTTGGTGA 59.504 50.000 0.00 0.00 37.46 4.02
142 143 2.233922 ACTCCTAATGGACGAGTTGGTG 59.766 50.000 0.00 0.00 37.46 4.17
143 144 2.537143 ACTCCTAATGGACGAGTTGGT 58.463 47.619 0.00 0.00 37.46 3.67
144 145 3.952323 TCTACTCCTAATGGACGAGTTGG 59.048 47.826 0.00 0.00 37.93 3.77
145 146 4.882427 TCTCTACTCCTAATGGACGAGTTG 59.118 45.833 0.00 0.00 37.93 3.16
146 147 5.113446 TCTCTACTCCTAATGGACGAGTT 57.887 43.478 0.00 0.00 37.93 3.01
147 148 4.774660 TCTCTACTCCTAATGGACGAGT 57.225 45.455 0.00 0.00 40.00 4.18
148 149 5.067273 ACATCTCTACTCCTAATGGACGAG 58.933 45.833 0.00 0.00 37.46 4.18
149 150 5.050126 ACATCTCTACTCCTAATGGACGA 57.950 43.478 0.00 0.00 37.46 4.20
150 151 5.049060 CAGACATCTCTACTCCTAATGGACG 60.049 48.000 0.00 0.00 37.46 4.79
151 152 6.065374 TCAGACATCTCTACTCCTAATGGAC 58.935 44.000 0.00 0.00 37.46 4.02
152 153 6.126332 ACTCAGACATCTCTACTCCTAATGGA 60.126 42.308 0.00 0.00 40.69 3.41
153 154 6.068010 ACTCAGACATCTCTACTCCTAATGG 58.932 44.000 0.00 0.00 0.00 3.16
154 155 7.424803 CAACTCAGACATCTCTACTCCTAATG 58.575 42.308 0.00 0.00 0.00 1.90
155 156 6.549364 CCAACTCAGACATCTCTACTCCTAAT 59.451 42.308 0.00 0.00 0.00 1.73
156 157 5.888724 CCAACTCAGACATCTCTACTCCTAA 59.111 44.000 0.00 0.00 0.00 2.69
157 158 5.044772 ACCAACTCAGACATCTCTACTCCTA 60.045 44.000 0.00 0.00 0.00 2.94
158 159 4.264172 ACCAACTCAGACATCTCTACTCCT 60.264 45.833 0.00 0.00 0.00 3.69
159 160 4.020543 ACCAACTCAGACATCTCTACTCC 58.979 47.826 0.00 0.00 0.00 3.85
160 161 4.702612 TCACCAACTCAGACATCTCTACTC 59.297 45.833 0.00 0.00 0.00 2.59
161 162 4.667573 TCACCAACTCAGACATCTCTACT 58.332 43.478 0.00 0.00 0.00 2.57
162 163 5.392767 TTCACCAACTCAGACATCTCTAC 57.607 43.478 0.00 0.00 0.00 2.59
163 164 6.183360 GCTATTCACCAACTCAGACATCTCTA 60.183 42.308 0.00 0.00 0.00 2.43
164 165 5.395103 GCTATTCACCAACTCAGACATCTCT 60.395 44.000 0.00 0.00 0.00 3.10
165 166 4.808364 GCTATTCACCAACTCAGACATCTC 59.192 45.833 0.00 0.00 0.00 2.75
166 167 4.223700 TGCTATTCACCAACTCAGACATCT 59.776 41.667 0.00 0.00 0.00 2.90
167 168 4.507710 TGCTATTCACCAACTCAGACATC 58.492 43.478 0.00 0.00 0.00 3.06
171 172 3.519107 TGGATGCTATTCACCAACTCAGA 59.481 43.478 0.00 0.00 0.00 3.27
238 239 1.130955 GTGACGCGAAACTAAACCGA 58.869 50.000 15.93 0.00 0.00 4.69
336 344 8.503458 AGAGATTGATCGTGATTGATTCTTTT 57.497 30.769 0.00 0.00 0.00 2.27
450 458 8.585471 ATGGAAATAATGCCTTACATATCTGG 57.415 34.615 0.00 0.00 38.34 3.86
460 468 8.537728 TGACAAATAGATGGAAATAATGCCTT 57.462 30.769 0.00 0.00 0.00 4.35
505 513 2.791849 CGCCGTTTTCGTTGGAAAGAAA 60.792 45.455 0.00 0.00 42.72 2.52
678 1266 2.028476 TCACGTCCCATTGACTTCGATT 60.028 45.455 0.00 0.00 42.13 3.34
700 1288 6.238484 GGCAAACATCTTATTCTTATGACGCT 60.238 38.462 0.00 0.00 0.00 5.07
741 1329 7.184067 AGAGACTAACGTAAGATGGGAAATT 57.816 36.000 0.00 0.00 43.62 1.82
742 1330 6.793505 AGAGACTAACGTAAGATGGGAAAT 57.206 37.500 0.00 0.00 43.62 2.17
778 1366 6.658188 AAAAATTACCCGATGGAAAACTGA 57.342 33.333 0.00 0.00 34.81 3.41
873 1504 3.067601 CGTGGGTGAGTATATGCTGTACA 59.932 47.826 0.00 0.00 0.00 2.90
883 1516 1.001760 AGGCTCCGTGGGTGAGTAT 59.998 57.895 0.00 0.00 32.31 2.12
884 1517 1.681327 GAGGCTCCGTGGGTGAGTA 60.681 63.158 2.15 0.00 32.31 2.59
1274 1922 0.312729 CCGGCCGCTACAAAAACTTT 59.687 50.000 22.85 0.00 0.00 2.66
1379 2042 3.673902 CACATGTAGTGTCACCATCCAA 58.326 45.455 0.00 0.00 43.40 3.53
1578 2688 7.386059 GGTGGATCCAAGACAAATATTTGTTT 58.614 34.615 29.47 23.06 42.61 2.83
1720 2995 6.218195 ACCATATTTGACATACATCCCCAT 57.782 37.500 0.00 0.00 0.00 4.00
1849 3131 0.034670 AGAGCAACATGGAGGGAAGC 60.035 55.000 0.00 0.00 0.00 3.86
1963 3250 5.028802 TGCCCATTTTAGAATCCCAAATGA 58.971 37.500 13.40 0.00 39.34 2.57
2012 3300 7.095060 TGTGTCTCTTGATCAAATTGCTACTTC 60.095 37.037 9.88 2.33 0.00 3.01
2053 3352 2.552373 GGTTAGCACCTAAACTGCACCT 60.552 50.000 0.00 0.00 40.44 4.00
2054 3353 1.810755 GGTTAGCACCTAAACTGCACC 59.189 52.381 0.00 0.00 40.44 5.01
2146 3604 3.154710 TCCACTCGTAGACACACTCAAT 58.845 45.455 0.00 0.00 0.00 2.57
2298 4719 4.542662 ACAATCTAACATCATGAAGCGC 57.457 40.909 0.00 0.00 0.00 5.92
2299 4720 6.355397 AGAACAATCTAACATCATGAAGCG 57.645 37.500 0.00 0.00 32.88 4.68
2424 4848 4.054671 AGAGAAAAACGAGAAGCAGTCAG 58.945 43.478 0.00 0.00 0.00 3.51
2448 4886 4.223953 TCCAGGACCTGATAAGATACACC 58.776 47.826 23.77 0.00 32.44 4.16
2601 5039 3.387374 AGAGCAATCAGTCCTACCATCAG 59.613 47.826 0.00 0.00 0.00 2.90
2670 5125 9.642343 AACCTTCTAGAAATAGAAAACAAGGTT 57.358 29.630 6.63 8.68 36.06 3.50
2688 5143 7.990886 GGAAACACCATATCATACAACCTTCTA 59.009 37.037 0.00 0.00 38.79 2.10
2773 5228 9.006839 AGACATCAGGCACACATAATATAAATG 57.993 33.333 0.00 0.00 0.00 2.32
2875 5619 5.006746 GCAGCATTGGTTCTGTATACAGTAC 59.993 44.000 27.83 26.93 44.12 2.73
2896 5640 3.872771 GGAACAAAATGGCCATAATGCAG 59.127 43.478 21.15 8.70 0.00 4.41
2940 5684 6.948309 GGGATGAGGGTGTATTAGCATAAAAT 59.052 38.462 0.00 0.00 0.00 1.82
2957 5703 0.399091 TGACAGCTAGGGGGATGAGG 60.399 60.000 0.00 0.00 0.00 3.86
3005 5751 9.605275 CCTCAAAAAGATTGACTACATATGAGA 57.395 33.333 10.38 0.00 0.00 3.27
3006 5752 8.834465 CCCTCAAAAAGATTGACTACATATGAG 58.166 37.037 10.38 5.24 0.00 2.90
3022 7659 4.040339 ACCCAAGTATTTGCCCTCAAAAAG 59.960 41.667 0.00 0.00 44.44 2.27
3120 7757 8.213679 CCATGGAGATTGAATTTCTAGGTCTTA 58.786 37.037 5.56 0.00 0.00 2.10
3135 7772 0.467384 ACTCGCCTCCATGGAGATTG 59.533 55.000 38.37 26.61 43.61 2.67
3195 7832 3.446516 GCCTTCCATGCTCATCTCTTTTT 59.553 43.478 0.00 0.00 0.00 1.94
3196 7833 3.022406 GCCTTCCATGCTCATCTCTTTT 58.978 45.455 0.00 0.00 0.00 2.27
3321 8204 1.136329 AGAGCCTCTTGGAGCCCAAA 61.136 55.000 7.87 0.48 43.44 3.28
3339 8222 0.249120 TGGTTCATACCCACTCGCAG 59.751 55.000 0.00 0.00 44.35 5.18
3357 8343 5.403166 CAGCAAGTTGAACAACCAATATGTG 59.597 40.000 7.16 3.61 42.06 3.21
3385 8371 2.911552 TAATCCCAACCCCCTTCAAC 57.088 50.000 0.00 0.00 0.00 3.18
3396 8383 7.773489 TTTGACTCACATGATTTAATCCCAA 57.227 32.000 0.00 0.00 0.00 4.12
3402 8389 8.868522 AGAGGATTTTGACTCACATGATTTAA 57.131 30.769 0.00 0.00 36.20 1.52
3546 8535 4.851558 GGCTAGTGTCAACTTATTTTTGCG 59.148 41.667 0.00 0.00 37.88 4.85
3611 8600 1.268488 TGCACGTCAAGCAACAATGTC 60.268 47.619 0.00 0.00 39.39 3.06
3612 8601 0.737804 TGCACGTCAAGCAACAATGT 59.262 45.000 0.00 0.00 39.39 2.71
3613 8602 1.782569 CTTGCACGTCAAGCAACAATG 59.217 47.619 7.62 0.00 46.13 2.82
3615 8604 3.620615 CTTGCACGTCAAGCAACAA 57.379 47.368 7.62 0.00 46.13 2.83
3622 8611 6.653320 ACTTTTAGGATATTCTTGCACGTCAA 59.347 34.615 0.00 0.00 0.00 3.18
3623 8612 6.170506 ACTTTTAGGATATTCTTGCACGTCA 58.829 36.000 0.00 0.00 0.00 4.35
3624 8613 6.663944 ACTTTTAGGATATTCTTGCACGTC 57.336 37.500 0.00 0.00 0.00 4.34
3625 8614 9.998106 ATATACTTTTAGGATATTCTTGCACGT 57.002 29.630 0.00 0.00 0.00 4.49
3647 8636 9.883142 TGCCATGAATTAATCGTATCACATATA 57.117 29.630 0.00 0.00 0.00 0.86
3648 8637 8.791327 TGCCATGAATTAATCGTATCACATAT 57.209 30.769 0.00 0.00 0.00 1.78
3649 8638 8.614469 TTGCCATGAATTAATCGTATCACATA 57.386 30.769 0.00 0.00 0.00 2.29
3650 8639 7.509141 TTGCCATGAATTAATCGTATCACAT 57.491 32.000 0.00 0.00 0.00 3.21
3651 8640 6.934048 TTGCCATGAATTAATCGTATCACA 57.066 33.333 0.00 0.00 0.00 3.58
3652 8641 6.306356 GCATTGCCATGAATTAATCGTATCAC 59.694 38.462 1.13 0.00 31.07 3.06
3653 8642 6.016443 TGCATTGCCATGAATTAATCGTATCA 60.016 34.615 6.12 0.00 31.07 2.15
3654 8643 6.306356 GTGCATTGCCATGAATTAATCGTATC 59.694 38.462 6.12 0.00 31.07 2.24
3655 8644 6.151691 GTGCATTGCCATGAATTAATCGTAT 58.848 36.000 6.12 0.00 31.07 3.06
3656 8645 5.518812 GTGCATTGCCATGAATTAATCGTA 58.481 37.500 6.12 0.00 31.07 3.43
3657 8646 4.362279 GTGCATTGCCATGAATTAATCGT 58.638 39.130 6.12 0.00 31.07 3.73
3658 8647 3.422876 CGTGCATTGCCATGAATTAATCG 59.577 43.478 6.12 0.00 31.07 3.34
3659 8648 3.737266 CCGTGCATTGCCATGAATTAATC 59.263 43.478 6.12 0.00 31.07 1.75
3660 8649 3.493002 CCCGTGCATTGCCATGAATTAAT 60.493 43.478 6.12 0.00 31.07 1.40
3661 8650 2.159128 CCCGTGCATTGCCATGAATTAA 60.159 45.455 6.12 0.00 31.07 1.40
3662 8651 1.408340 CCCGTGCATTGCCATGAATTA 59.592 47.619 6.12 0.00 31.07 1.40
3663 8652 0.176219 CCCGTGCATTGCCATGAATT 59.824 50.000 6.12 0.00 31.07 2.17
3664 8653 0.683828 TCCCGTGCATTGCCATGAAT 60.684 50.000 6.12 0.00 31.07 2.57
3665 8654 0.897401 TTCCCGTGCATTGCCATGAA 60.897 50.000 6.12 1.42 31.07 2.57
3666 8655 0.897401 TTTCCCGTGCATTGCCATGA 60.897 50.000 6.12 0.00 31.07 3.07
3667 8656 0.176219 ATTTCCCGTGCATTGCCATG 59.824 50.000 6.12 0.00 0.00 3.66
3668 8657 0.903942 AATTTCCCGTGCATTGCCAT 59.096 45.000 6.12 0.00 0.00 4.40
3669 8658 1.550327 TAATTTCCCGTGCATTGCCA 58.450 45.000 6.12 0.00 0.00 4.92
3670 8659 2.094234 AGTTAATTTCCCGTGCATTGCC 60.094 45.455 6.12 0.00 0.00 4.52
3671 8660 3.230743 AGTTAATTTCCCGTGCATTGC 57.769 42.857 0.46 0.46 0.00 3.56
3672 8661 6.329496 ACAATAGTTAATTTCCCGTGCATTG 58.671 36.000 0.00 0.00 0.00 2.82
3673 8662 6.524101 ACAATAGTTAATTTCCCGTGCATT 57.476 33.333 0.00 0.00 0.00 3.56
3674 8663 6.524101 AACAATAGTTAATTTCCCGTGCAT 57.476 33.333 0.00 0.00 35.85 3.96
3675 8664 5.968528 AACAATAGTTAATTTCCCGTGCA 57.031 34.783 0.00 0.00 35.85 4.57
3676 8665 7.311364 TCTAACAATAGTTAATTTCCCGTGC 57.689 36.000 0.00 0.00 39.58 5.34
3688 8677 8.197439 GCTGCCCAAATTATTCTAACAATAGTT 58.803 33.333 0.00 0.00 41.74 2.24
3689 8678 7.561356 AGCTGCCCAAATTATTCTAACAATAGT 59.439 33.333 0.00 0.00 0.00 2.12
3690 8679 7.864379 CAGCTGCCCAAATTATTCTAACAATAG 59.136 37.037 0.00 0.00 0.00 1.73
3691 8680 7.201902 CCAGCTGCCCAAATTATTCTAACAATA 60.202 37.037 8.66 0.00 0.00 1.90
3692 8681 6.407299 CCAGCTGCCCAAATTATTCTAACAAT 60.407 38.462 8.66 0.00 0.00 2.71
3693 8682 5.105392 CCAGCTGCCCAAATTATTCTAACAA 60.105 40.000 8.66 0.00 0.00 2.83
3694 8683 4.402155 CCAGCTGCCCAAATTATTCTAACA 59.598 41.667 8.66 0.00 0.00 2.41
3695 8684 4.737649 GCCAGCTGCCCAAATTATTCTAAC 60.738 45.833 8.66 0.00 0.00 2.34
3696 8685 3.384467 GCCAGCTGCCCAAATTATTCTAA 59.616 43.478 8.66 0.00 0.00 2.10
3697 8686 2.958355 GCCAGCTGCCCAAATTATTCTA 59.042 45.455 8.66 0.00 0.00 2.10
3698 8687 1.758862 GCCAGCTGCCCAAATTATTCT 59.241 47.619 8.66 0.00 0.00 2.40
3699 8688 2.229675 GCCAGCTGCCCAAATTATTC 57.770 50.000 8.66 0.00 0.00 1.75
3710 8699 3.909086 AAGAACGAGGGCCAGCTGC 62.909 63.158 8.66 3.68 40.16 5.25
3711 8700 0.890996 AAAAGAACGAGGGCCAGCTG 60.891 55.000 6.78 6.78 0.00 4.24
3712 8701 0.606673 GAAAAGAACGAGGGCCAGCT 60.607 55.000 6.18 0.00 0.00 4.24
3713 8702 0.606673 AGAAAAGAACGAGGGCCAGC 60.607 55.000 6.18 0.00 0.00 4.85
3714 8703 2.762535 TAGAAAAGAACGAGGGCCAG 57.237 50.000 6.18 0.96 0.00 4.85
3715 8704 3.713826 AATAGAAAAGAACGAGGGCCA 57.286 42.857 6.18 0.00 0.00 5.36
3716 8705 4.007659 TCAAATAGAAAAGAACGAGGGCC 58.992 43.478 0.00 0.00 0.00 5.80
3717 8706 5.622770 TTCAAATAGAAAAGAACGAGGGC 57.377 39.130 0.00 0.00 32.05 5.19
3718 8707 9.162764 TCTAATTCAAATAGAAAAGAACGAGGG 57.837 33.333 0.00 0.00 40.22 4.30
3733 8722 9.985730 TTCAGAACAAGCAAATCTAATTCAAAT 57.014 25.926 0.00 0.00 0.00 2.32
3734 8723 9.814899 TTTCAGAACAAGCAAATCTAATTCAAA 57.185 25.926 0.00 0.00 0.00 2.69
3735 8724 9.985730 ATTTCAGAACAAGCAAATCTAATTCAA 57.014 25.926 0.00 0.00 0.00 2.69
3736 8725 9.985730 AATTTCAGAACAAGCAAATCTAATTCA 57.014 25.926 0.00 0.00 0.00 2.57
3739 8728 9.768662 ACAAATTTCAGAACAAGCAAATCTAAT 57.231 25.926 0.00 0.00 0.00 1.73
3741 8730 9.897744 CTACAAATTTCAGAACAAGCAAATCTA 57.102 29.630 0.00 0.00 0.00 1.98
3742 8731 7.869429 CCTACAAATTTCAGAACAAGCAAATCT 59.131 33.333 0.00 0.00 0.00 2.40
3743 8732 7.359514 GCCTACAAATTTCAGAACAAGCAAATC 60.360 37.037 0.00 0.00 0.00 2.17
3744 8733 6.424812 GCCTACAAATTTCAGAACAAGCAAAT 59.575 34.615 0.00 0.00 0.00 2.32
3745 8734 5.752955 GCCTACAAATTTCAGAACAAGCAAA 59.247 36.000 0.00 0.00 0.00 3.68
3746 8735 5.163468 TGCCTACAAATTTCAGAACAAGCAA 60.163 36.000 0.00 0.00 0.00 3.91
3747 8736 4.340666 TGCCTACAAATTTCAGAACAAGCA 59.659 37.500 0.00 0.00 0.00 3.91
3748 8737 4.870363 TGCCTACAAATTTCAGAACAAGC 58.130 39.130 0.00 0.00 0.00 4.01
3749 8738 6.364165 CACATGCCTACAAATTTCAGAACAAG 59.636 38.462 0.00 0.00 0.00 3.16
3750 8739 6.215121 CACATGCCTACAAATTTCAGAACAA 58.785 36.000 0.00 0.00 0.00 2.83
3751 8740 5.278907 CCACATGCCTACAAATTTCAGAACA 60.279 40.000 0.00 0.00 0.00 3.18
3752 8741 5.163513 CCACATGCCTACAAATTTCAGAAC 58.836 41.667 0.00 0.00 0.00 3.01
3753 8742 4.832266 ACCACATGCCTACAAATTTCAGAA 59.168 37.500 0.00 0.00 0.00 3.02
3754 8743 4.218200 CACCACATGCCTACAAATTTCAGA 59.782 41.667 0.00 0.00 0.00 3.27
3755 8744 4.022068 ACACCACATGCCTACAAATTTCAG 60.022 41.667 0.00 0.00 0.00 3.02
3756 8745 3.894427 ACACCACATGCCTACAAATTTCA 59.106 39.130 0.00 0.00 0.00 2.69
3757 8746 4.236935 CACACCACATGCCTACAAATTTC 58.763 43.478 0.00 0.00 0.00 2.17
3758 8747 3.640967 ACACACCACATGCCTACAAATTT 59.359 39.130 0.00 0.00 0.00 1.82
3759 8748 3.230134 ACACACCACATGCCTACAAATT 58.770 40.909 0.00 0.00 0.00 1.82
3760 8749 2.875296 ACACACCACATGCCTACAAAT 58.125 42.857 0.00 0.00 0.00 2.32
3761 8750 2.356665 ACACACCACATGCCTACAAA 57.643 45.000 0.00 0.00 0.00 2.83
3762 8751 1.952990 CAACACACCACATGCCTACAA 59.047 47.619 0.00 0.00 0.00 2.41
3763 8752 1.133945 ACAACACACCACATGCCTACA 60.134 47.619 0.00 0.00 0.00 2.74
3764 8753 1.604604 ACAACACACCACATGCCTAC 58.395 50.000 0.00 0.00 0.00 3.18
3765 8754 3.712016 ATACAACACACCACATGCCTA 57.288 42.857 0.00 0.00 0.00 3.93
3766 8755 2.557924 CAATACAACACACCACATGCCT 59.442 45.455 0.00 0.00 0.00 4.75
3767 8756 2.556189 TCAATACAACACACCACATGCC 59.444 45.455 0.00 0.00 0.00 4.40
3768 8757 3.913548 TCAATACAACACACCACATGC 57.086 42.857 0.00 0.00 0.00 4.06
3769 8758 5.885230 AGATCAATACAACACACCACATG 57.115 39.130 0.00 0.00 0.00 3.21
3770 8759 5.183713 CCAAGATCAATACAACACACCACAT 59.816 40.000 0.00 0.00 0.00 3.21
3771 8760 4.518590 CCAAGATCAATACAACACACCACA 59.481 41.667 0.00 0.00 0.00 4.17
3772 8761 4.518970 ACCAAGATCAATACAACACACCAC 59.481 41.667 0.00 0.00 0.00 4.16
3773 8762 4.724399 ACCAAGATCAATACAACACACCA 58.276 39.130 0.00 0.00 0.00 4.17
3774 8763 5.003804 AGACCAAGATCAATACAACACACC 58.996 41.667 0.00 0.00 0.00 4.16
3775 8764 6.017109 ACAAGACCAAGATCAATACAACACAC 60.017 38.462 0.00 0.00 0.00 3.82
3776 8765 6.061441 ACAAGACCAAGATCAATACAACACA 58.939 36.000 0.00 0.00 0.00 3.72
3777 8766 6.560253 ACAAGACCAAGATCAATACAACAC 57.440 37.500 0.00 0.00 0.00 3.32
3778 8767 7.068103 ACAAACAAGACCAAGATCAATACAACA 59.932 33.333 0.00 0.00 0.00 3.33
3779 8768 7.425606 ACAAACAAGACCAAGATCAATACAAC 58.574 34.615 0.00 0.00 0.00 3.32
3780 8769 7.581213 ACAAACAAGACCAAGATCAATACAA 57.419 32.000 0.00 0.00 0.00 2.41
3781 8770 7.424803 CAACAAACAAGACCAAGATCAATACA 58.575 34.615 0.00 0.00 0.00 2.29
3782 8771 6.363357 GCAACAAACAAGACCAAGATCAATAC 59.637 38.462 0.00 0.00 0.00 1.89
3783 8772 6.040278 TGCAACAAACAAGACCAAGATCAATA 59.960 34.615 0.00 0.00 0.00 1.90
3784 8773 5.163426 TGCAACAAACAAGACCAAGATCAAT 60.163 36.000 0.00 0.00 0.00 2.57
3785 8774 4.159321 TGCAACAAACAAGACCAAGATCAA 59.841 37.500 0.00 0.00 0.00 2.57
3786 8775 3.698539 TGCAACAAACAAGACCAAGATCA 59.301 39.130 0.00 0.00 0.00 2.92
3787 8776 4.036734 TCTGCAACAAACAAGACCAAGATC 59.963 41.667 0.00 0.00 0.00 2.75
3788 8777 3.953612 TCTGCAACAAACAAGACCAAGAT 59.046 39.130 0.00 0.00 0.00 2.40
3789 8778 3.351740 TCTGCAACAAACAAGACCAAGA 58.648 40.909 0.00 0.00 0.00 3.02
3790 8779 3.378112 TCTCTGCAACAAACAAGACCAAG 59.622 43.478 0.00 0.00 0.00 3.61
3791 8780 3.128589 GTCTCTGCAACAAACAAGACCAA 59.871 43.478 0.00 0.00 0.00 3.67
3792 8781 2.682856 GTCTCTGCAACAAACAAGACCA 59.317 45.455 0.00 0.00 0.00 4.02
3793 8782 2.682856 TGTCTCTGCAACAAACAAGACC 59.317 45.455 0.00 0.00 33.79 3.85
3794 8783 3.487544 GGTGTCTCTGCAACAAACAAGAC 60.488 47.826 0.00 0.00 34.98 3.01
3795 8784 2.682856 GGTGTCTCTGCAACAAACAAGA 59.317 45.455 0.00 0.00 0.00 3.02
3796 8785 2.684881 AGGTGTCTCTGCAACAAACAAG 59.315 45.455 0.00 0.00 0.00 3.16
3797 8786 2.423185 CAGGTGTCTCTGCAACAAACAA 59.577 45.455 0.00 0.00 0.00 2.83
3798 8787 2.016318 CAGGTGTCTCTGCAACAAACA 58.984 47.619 0.00 0.00 0.00 2.83
3799 8788 1.334869 CCAGGTGTCTCTGCAACAAAC 59.665 52.381 0.00 0.00 33.64 2.93
3800 8789 1.679139 CCAGGTGTCTCTGCAACAAA 58.321 50.000 0.00 0.00 33.64 2.83
3801 8790 0.819259 GCCAGGTGTCTCTGCAACAA 60.819 55.000 0.00 0.00 33.64 2.83
3802 8791 1.227943 GCCAGGTGTCTCTGCAACA 60.228 57.895 0.00 0.00 33.64 3.33
3803 8792 2.320587 CGCCAGGTGTCTCTGCAAC 61.321 63.158 0.00 0.00 33.64 4.17
3804 8793 1.830587 ATCGCCAGGTGTCTCTGCAA 61.831 55.000 0.00 0.00 33.64 4.08
3805 8794 2.285773 ATCGCCAGGTGTCTCTGCA 61.286 57.895 0.00 0.00 33.64 4.41
3806 8795 1.812922 CATCGCCAGGTGTCTCTGC 60.813 63.158 0.00 0.00 33.64 4.26
3807 8796 0.817654 TACATCGCCAGGTGTCTCTG 59.182 55.000 0.00 0.00 34.70 3.35
3808 8797 1.683917 GATACATCGCCAGGTGTCTCT 59.316 52.381 0.00 0.00 0.00 3.10
3809 8798 1.600663 CGATACATCGCCAGGTGTCTC 60.601 57.143 0.00 0.00 43.84 3.36
3810 8799 0.385751 CGATACATCGCCAGGTGTCT 59.614 55.000 0.00 0.00 43.84 3.41
3811 8800 2.886859 CGATACATCGCCAGGTGTC 58.113 57.895 0.00 0.00 43.84 3.67
3821 8810 4.371786 TGCAGGACAGATTTCGATACATC 58.628 43.478 0.00 0.00 0.00 3.06
3822 8811 4.406648 TGCAGGACAGATTTCGATACAT 57.593 40.909 0.00 0.00 0.00 2.29
3823 8812 3.885724 TGCAGGACAGATTTCGATACA 57.114 42.857 0.00 0.00 0.00 2.29
3824 8813 8.534333 TTATTATGCAGGACAGATTTCGATAC 57.466 34.615 0.00 0.00 0.00 2.24
3825 8814 9.208022 CTTTATTATGCAGGACAGATTTCGATA 57.792 33.333 0.00 0.00 0.00 2.92
3826 8815 7.173907 CCTTTATTATGCAGGACAGATTTCGAT 59.826 37.037 0.00 0.00 0.00 3.59
3827 8816 6.483307 CCTTTATTATGCAGGACAGATTTCGA 59.517 38.462 0.00 0.00 0.00 3.71
3828 8817 6.483307 TCCTTTATTATGCAGGACAGATTTCG 59.517 38.462 0.00 0.00 31.33 3.46
3829 8818 7.521261 GCTCCTTTATTATGCAGGACAGATTTC 60.521 40.741 0.00 0.00 32.96 2.17
3830 8819 6.264067 GCTCCTTTATTATGCAGGACAGATTT 59.736 38.462 0.00 0.00 32.96 2.17
3831 8820 5.767168 GCTCCTTTATTATGCAGGACAGATT 59.233 40.000 0.00 0.00 32.96 2.40
3832 8821 5.312079 GCTCCTTTATTATGCAGGACAGAT 58.688 41.667 0.00 0.00 32.96 2.90
3833 8822 4.708177 GCTCCTTTATTATGCAGGACAGA 58.292 43.478 0.00 0.00 32.96 3.41
3834 8823 3.496130 CGCTCCTTTATTATGCAGGACAG 59.504 47.826 0.00 0.00 32.96 3.51
3835 8824 3.466836 CGCTCCTTTATTATGCAGGACA 58.533 45.455 0.00 0.00 32.96 4.02
3836 8825 2.224314 GCGCTCCTTTATTATGCAGGAC 59.776 50.000 0.00 0.00 32.96 3.85
3837 8826 2.104792 AGCGCTCCTTTATTATGCAGGA 59.895 45.455 2.64 0.00 35.32 3.86
3838 8827 2.225019 CAGCGCTCCTTTATTATGCAGG 59.775 50.000 7.13 0.00 0.00 4.85
3839 8828 3.133691 TCAGCGCTCCTTTATTATGCAG 58.866 45.455 7.13 0.00 0.00 4.41
3840 8829 3.133691 CTCAGCGCTCCTTTATTATGCA 58.866 45.455 7.13 0.00 0.00 3.96
3841 8830 2.481952 CCTCAGCGCTCCTTTATTATGC 59.518 50.000 7.13 0.00 0.00 3.14
3842 8831 3.995199 TCCTCAGCGCTCCTTTATTATG 58.005 45.455 7.13 0.00 0.00 1.90
3843 8832 4.284490 TCATCCTCAGCGCTCCTTTATTAT 59.716 41.667 7.13 0.00 0.00 1.28
3844 8833 3.641436 TCATCCTCAGCGCTCCTTTATTA 59.359 43.478 7.13 0.00 0.00 0.98
3856 8845 2.048444 TGAAAGCCATCATCCTCAGC 57.952 50.000 0.00 0.00 0.00 4.26
3866 8855 2.971330 TCCAAACCAACATGAAAGCCAT 59.029 40.909 0.00 0.00 35.44 4.40
3895 8884 0.320697 AGAAGCCACACTACCGAACC 59.679 55.000 0.00 0.00 0.00 3.62
3915 8904 4.232221 CAAAAGGTTGCAGCTGACATAAG 58.768 43.478 20.43 0.00 0.00 1.73
3916 8905 3.005684 CCAAAAGGTTGCAGCTGACATAA 59.994 43.478 20.43 3.37 33.01 1.90
3925 8914 2.524306 TGATACCCCAAAAGGTTGCAG 58.476 47.619 0.00 0.00 41.58 4.41
3927 8916 5.507315 CGAATATGATACCCCAAAAGGTTGC 60.507 44.000 0.00 0.00 41.58 4.17
3928 8917 5.507315 GCGAATATGATACCCCAAAAGGTTG 60.507 44.000 0.00 0.00 41.58 3.77
3929 8918 4.583073 GCGAATATGATACCCCAAAAGGTT 59.417 41.667 0.00 0.00 41.58 3.50
3931 8920 4.216257 CAGCGAATATGATACCCCAAAAGG 59.784 45.833 0.00 0.00 0.00 3.11
3933 8922 5.042463 TCAGCGAATATGATACCCCAAAA 57.958 39.130 0.00 0.00 0.00 2.44
3934 8923 4.698201 TCAGCGAATATGATACCCCAAA 57.302 40.909 0.00 0.00 0.00 3.28
4007 8996 2.754552 GCCACAACATATCCACACATGT 59.245 45.455 0.00 0.00 36.96 3.21
4009 8998 2.378038 GGCCACAACATATCCACACAT 58.622 47.619 0.00 0.00 0.00 3.21
4068 9057 9.634021 TGCACATGACCATAAATATTACCTAAA 57.366 29.630 0.00 0.00 0.00 1.85
4145 9137 5.220453 GCTGAATTCCCAATTAACATTTGCG 60.220 40.000 2.27 0.00 0.00 4.85
4230 9222 8.854614 AAGGCTCCTGTAACATATATTCATTC 57.145 34.615 0.00 0.00 0.00 2.67
4269 9261 2.312741 ACCCCATTCACCTCATGACAAT 59.687 45.455 0.00 0.00 36.92 2.71
4356 9355 7.558161 CTGCTAACAGGAATCAATGAATACA 57.442 36.000 0.00 0.00 40.48 2.29
4451 9582 4.867047 ACTCGCTAAGAATGAATGTCTGTG 59.133 41.667 0.00 0.00 0.00 3.66
4463 9596 0.178068 GCCCATGGACTCGCTAAGAA 59.822 55.000 15.22 0.00 0.00 2.52
4557 9690 6.899393 AATCAAAACTGAACTCATGGCTTA 57.101 33.333 0.00 0.00 0.00 3.09
4651 9786 6.705381 TGGCTTTCGAAAATTCATGACAATTT 59.295 30.769 12.41 0.00 37.53 1.82
4701 9836 8.500773 AGTGTATAATAAAATATTTGCCGACGG 58.499 33.333 10.29 10.29 0.00 4.79
4765 9900 6.927294 CCACTTGGGTATCATAAAGAGTTC 57.073 41.667 0.00 0.00 0.00 3.01
4784 9919 1.547755 TCTCTCCCTCCCTCCCACT 60.548 63.158 0.00 0.00 0.00 4.00
4789 9924 1.421646 CTCTCTCTCTCTCCCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
4791 9926 1.421646 CTCTCTCTCTCTCTCCCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
4792 9927 2.370189 CTCTCTCTCTCTCTCTCCCTCC 59.630 59.091 0.00 0.00 0.00 4.30
4794 9929 2.412591 CCTCTCTCTCTCTCTCTCCCT 58.587 57.143 0.00 0.00 0.00 4.20
4803 9938 0.478507 CCTCCCTCCCTCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
4807 9942 1.541672 CTCCCTCCCTCCCTCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
4808 9943 2.018086 CCTCCCTCCCTCCCTCTCT 61.018 68.421 0.00 0.00 0.00 3.10
4809 9944 2.612251 CCTCCCTCCCTCCCTCTC 59.388 72.222 0.00 0.00 0.00 3.20
4810 9945 3.039526 CCCTCCCTCCCTCCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
4811 9946 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
4812 9947 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
4813 9948 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
4814 9949 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
4815 9950 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
4816 9951 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
4817 9952 3.036959 TCTCCCTCCCTCCCTCCC 61.037 72.222 0.00 0.00 0.00 4.30
4818 9953 1.376249 ATCTCTCCCTCCCTCCCTCC 61.376 65.000 0.00 0.00 0.00 4.30
4819 9954 0.178935 CATCTCTCCCTCCCTCCCTC 60.179 65.000 0.00 0.00 0.00 4.30
4820 9955 1.673928 CCATCTCTCCCTCCCTCCCT 61.674 65.000 0.00 0.00 0.00 4.20
4821 9956 1.152139 CCATCTCTCCCTCCCTCCC 60.152 68.421 0.00 0.00 0.00 4.30
4822 9957 0.491371 ATCCATCTCTCCCTCCCTCC 59.509 60.000 0.00 0.00 0.00 4.30
4823 9958 1.643310 CATCCATCTCTCCCTCCCTC 58.357 60.000 0.00 0.00 0.00 4.30
4824 9959 0.193069 CCATCCATCTCTCCCTCCCT 59.807 60.000 0.00 0.00 0.00 4.20
4825 9960 0.839853 CCCATCCATCTCTCCCTCCC 60.840 65.000 0.00 0.00 0.00 4.30
4826 9961 0.839853 CCCCATCCATCTCTCCCTCC 60.840 65.000 0.00 0.00 0.00 4.30
4827 9962 0.192064 TCCCCATCCATCTCTCCCTC 59.808 60.000 0.00 0.00 0.00 4.30
4828 9963 0.880357 ATCCCCATCCATCTCTCCCT 59.120 55.000 0.00 0.00 0.00 4.20
4829 9964 1.284313 GATCCCCATCCATCTCTCCC 58.716 60.000 0.00 0.00 0.00 4.30
4830 9965 2.035910 TGATCCCCATCCATCTCTCC 57.964 55.000 0.00 0.00 0.00 3.71
4831 9966 3.244840 CCTTTGATCCCCATCCATCTCTC 60.245 52.174 0.00 0.00 0.00 3.20
4832 9967 2.715336 CCTTTGATCCCCATCCATCTCT 59.285 50.000 0.00 0.00 0.00 3.10
4833 9968 2.713167 TCCTTTGATCCCCATCCATCTC 59.287 50.000 0.00 0.00 0.00 2.75
4834 9969 2.793017 TCCTTTGATCCCCATCCATCT 58.207 47.619 0.00 0.00 0.00 2.90
4835 9970 3.494332 CTTCCTTTGATCCCCATCCATC 58.506 50.000 0.00 0.00 0.00 3.51
4836 9971 2.178544 CCTTCCTTTGATCCCCATCCAT 59.821 50.000 0.00 0.00 0.00 3.41
4837 9972 1.570501 CCTTCCTTTGATCCCCATCCA 59.429 52.381 0.00 0.00 0.00 3.41
4838 9973 1.133356 CCCTTCCTTTGATCCCCATCC 60.133 57.143 0.00 0.00 0.00 3.51
4839 9974 1.852965 TCCCTTCCTTTGATCCCCATC 59.147 52.381 0.00 0.00 0.00 3.51
4840 9975 1.855599 CTCCCTTCCTTTGATCCCCAT 59.144 52.381 0.00 0.00 0.00 4.00
4841 9976 1.203557 TCTCCCTTCCTTTGATCCCCA 60.204 52.381 0.00 0.00 0.00 4.96
4842 9977 1.492599 CTCTCCCTTCCTTTGATCCCC 59.507 57.143 0.00 0.00 0.00 4.81
4843 9978 2.437651 CTCTCTCCCTTCCTTTGATCCC 59.562 54.545 0.00 0.00 0.00 3.85
4844 9979 2.437651 CCTCTCTCCCTTCCTTTGATCC 59.562 54.545 0.00 0.00 0.00 3.36
4845 9980 2.437651 CCCTCTCTCCCTTCCTTTGATC 59.562 54.545 0.00 0.00 0.00 2.92
4846 9981 2.486716 CCCTCTCTCCCTTCCTTTGAT 58.513 52.381 0.00 0.00 0.00 2.57
4847 9982 1.555765 CCCCTCTCTCCCTTCCTTTGA 60.556 57.143 0.00 0.00 0.00 2.69
4848 9983 0.915364 CCCCTCTCTCCCTTCCTTTG 59.085 60.000 0.00 0.00 0.00 2.77
4849 9984 0.253394 CCCCCTCTCTCCCTTCCTTT 60.253 60.000 0.00 0.00 0.00 3.11
4850 9985 1.398234 CCCCCTCTCTCCCTTCCTT 59.602 63.158 0.00 0.00 0.00 3.36
4851 9986 3.124088 CCCCCTCTCTCCCTTCCT 58.876 66.667 0.00 0.00 0.00 3.36
4866 10001 8.037723 TCACCTTTAATAGTAAAGATACCCCC 57.962 38.462 21.17 0.00 46.28 5.40
4872 10007 9.046296 CGCAGATTCACCTTTAATAGTAAAGAT 57.954 33.333 21.17 3.98 46.28 2.40
4873 10008 8.255206 TCGCAGATTCACCTTTAATAGTAAAGA 58.745 33.333 21.17 4.59 46.28 2.52
4874 10009 8.420374 TCGCAGATTCACCTTTAATAGTAAAG 57.580 34.615 14.33 14.33 44.01 1.85
4875 10010 8.958119 ATCGCAGATTCACCTTTAATAGTAAA 57.042 30.769 0.00 0.00 45.12 2.01
4876 10011 9.692749 CTATCGCAGATTCACCTTTAATAGTAA 57.307 33.333 0.00 0.00 45.12 2.24
4877 10012 8.857098 ACTATCGCAGATTCACCTTTAATAGTA 58.143 33.333 0.00 0.00 45.12 1.82
4878 10013 7.653713 CACTATCGCAGATTCACCTTTAATAGT 59.346 37.037 0.00 0.00 45.12 2.12
4879 10014 8.012151 CACTATCGCAGATTCACCTTTAATAG 57.988 38.462 0.00 0.00 45.12 1.73
4880 10015 7.946655 CACTATCGCAGATTCACCTTTAATA 57.053 36.000 0.00 0.00 45.12 0.98
4881 10016 6.851222 CACTATCGCAGATTCACCTTTAAT 57.149 37.500 0.00 0.00 45.12 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.