Multiple sequence alignment - TraesCS6D01G156700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G156700 chr6D 100.000 6727 0 0 1 6727 133212695 133205969 0.000000e+00 12423.0
1 TraesCS6D01G156700 chr6D 93.472 337 15 4 6392 6727 198593176 198592846 1.690000e-135 494.0
2 TraesCS6D01G156700 chr6D 87.143 140 18 0 5975 6114 133182091 133181952 6.980000e-35 159.0
3 TraesCS6D01G156700 chr6D 86.598 97 9 2 6103 6197 27848401 27848307 3.320000e-18 104.0
4 TraesCS6D01G156700 chr6D 86.207 87 8 2 6112 6196 448788060 448788144 2.580000e-14 91.6
5 TraesCS6D01G156700 chr6A 94.384 3490 114 31 414 3867 172117229 172113786 0.000000e+00 5284.0
6 TraesCS6D01G156700 chr6A 94.910 1945 55 13 4436 6368 172113080 172111168 0.000000e+00 3003.0
7 TraesCS6D01G156700 chr6A 94.708 359 16 1 3857 4212 172113623 172113265 7.620000e-154 555.0
8 TraesCS6D01G156700 chr6A 90.541 370 22 9 1 359 172117685 172117318 1.700000e-130 477.0
9 TraesCS6D01G156700 chr6A 100.000 103 0 0 4211 4313 172113180 172113078 2.480000e-44 191.0
10 TraesCS6D01G156700 chr6B 96.615 2600 66 11 1292 3880 231352912 231350324 0.000000e+00 4294.0
11 TraesCS6D01G156700 chr6B 94.424 1937 54 14 4436 6367 231349679 231347792 0.000000e+00 2929.0
12 TraesCS6D01G156700 chr6B 96.026 302 9 1 895 1193 231353541 231353240 7.840000e-134 488.0
13 TraesCS6D01G156700 chr6B 95.971 273 11 0 3881 4153 231350228 231349956 1.720000e-120 444.0
14 TraesCS6D01G156700 chr6B 85.640 383 44 5 422 800 231353996 231353621 6.320000e-105 392.0
15 TraesCS6D01G156700 chr6B 90.816 294 20 5 1 288 231354401 231354109 2.940000e-103 387.0
16 TraesCS6D01G156700 chr6B 84.868 304 36 10 502 801 166114690 166114987 1.420000e-76 298.0
17 TraesCS6D01G156700 chr6B 96.407 167 3 1 4150 4313 231349843 231349677 8.600000e-69 272.0
18 TraesCS6D01G156700 chr7D 94.848 330 10 4 6399 6727 200103729 200104052 6.020000e-140 508.0
19 TraesCS6D01G156700 chr7D 94.545 330 10 5 6400 6727 495175279 495174956 2.800000e-138 503.0
20 TraesCS6D01G156700 chr7D 94.242 330 11 5 6400 6727 393395982 393396305 1.300000e-136 497.0
21 TraesCS6D01G156700 chr7D 92.241 348 18 6 6381 6727 225547066 225547405 1.010000e-132 484.0
22 TraesCS6D01G156700 chr4D 94.529 329 11 4 6400 6727 400060098 400059776 1.010000e-137 501.0
23 TraesCS6D01G156700 chr4D 96.377 138 4 1 4309 4445 117643945 117644082 6.790000e-55 226.0
24 TraesCS6D01G156700 chr2D 94.529 329 10 5 6400 6727 85361519 85361840 1.010000e-137 501.0
25 TraesCS6D01G156700 chr2D 95.000 140 6 1 4305 4444 561025615 561025753 1.140000e-52 219.0
26 TraesCS6D01G156700 chr2D 93.103 145 8 2 4312 4454 646425200 646425344 1.900000e-50 211.0
27 TraesCS6D01G156700 chr2D 91.071 112 8 2 2861 2970 412473862 412473751 4.200000e-32 150.0
28 TraesCS6D01G156700 chr1D 94.529 329 11 4 6400 6727 287579505 287579827 1.010000e-137 501.0
29 TraesCS6D01G156700 chr1D 92.035 113 9 0 2859 2971 345266780 345266668 6.980000e-35 159.0
30 TraesCS6D01G156700 chr1D 88.793 116 13 0 2860 2975 128529215 128529100 7.030000e-30 143.0
31 TraesCS6D01G156700 chr1D 85.057 87 12 1 3707 3792 397044605 397044519 3.340000e-13 87.9
32 TraesCS6D01G156700 chr3D 94.225 329 12 4 6400 6727 183651789 183652111 4.690000e-136 496.0
33 TraesCS6D01G156700 chr3D 96.296 135 5 0 4305 4439 261156864 261156998 8.780000e-54 222.0
34 TraesCS6D01G156700 chr3D 96.269 134 5 0 4305 4438 8128026 8128159 3.160000e-53 220.0
35 TraesCS6D01G156700 chr3D 95.620 137 5 1 4312 4447 365000957 365000821 1.140000e-52 219.0
36 TraesCS6D01G156700 chr3D 93.243 148 9 1 4310 4457 593223410 593223264 4.090000e-52 217.0
37 TraesCS6D01G156700 chr5D 85.437 309 31 14 501 802 495614817 495615118 6.550000e-80 309.0
38 TraesCS6D01G156700 chr4B 85.016 307 34 11 501 802 579103350 579103649 1.100000e-77 302.0
39 TraesCS6D01G156700 chr4B 87.143 70 5 4 3843 3910 607644038 607643971 7.230000e-10 76.8
40 TraesCS6D01G156700 chr4A 85.016 307 35 11 501 802 21844254 21844554 1.100000e-77 302.0
41 TraesCS6D01G156700 chr4A 94.406 143 8 0 4303 4445 618085169 618085027 3.160000e-53 220.0
42 TraesCS6D01G156700 chr3B 85.113 309 30 14 502 802 708954584 708954884 1.100000e-77 302.0
43 TraesCS6D01G156700 chr3B 85.113 309 30 14 502 802 709075246 709075546 1.100000e-77 302.0
44 TraesCS6D01G156700 chr3B 86.364 88 8 2 6111 6196 725802582 725802497 7.180000e-15 93.5
45 TraesCS6D01G156700 chr3B 91.667 48 4 0 4144 4191 346612185 346612232 4.350000e-07 67.6
46 TraesCS6D01G156700 chr3A 84.641 306 35 11 503 802 645405794 645406093 1.830000e-75 294.0
47 TraesCS6D01G156700 chr7B 90.506 158 11 4 4309 4464 44295839 44295684 8.840000e-49 206.0
48 TraesCS6D01G156700 chr7B 93.878 49 3 0 4144 4192 478835088 478835136 2.600000e-09 75.0
49 TraesCS6D01G156700 chr1B 92.523 107 8 0 2859 2965 465698731 465698837 3.250000e-33 154.0
50 TraesCS6D01G156700 chr1B 86.207 87 11 1 3707 3792 532046494 532046408 7.180000e-15 93.5
51 TraesCS6D01G156700 chr2B 91.743 109 9 0 2862 2970 216462806 216462914 1.170000e-32 152.0
52 TraesCS6D01G156700 chr2B 92.157 102 8 0 2870 2971 169856253 169856152 1.960000e-30 145.0
53 TraesCS6D01G156700 chr1A 90.179 112 11 0 2863 2974 106228074 106228185 5.440000e-31 147.0
54 TraesCS6D01G156700 chr1A 90.265 113 9 2 2859 2970 445261484 445261373 5.440000e-31 147.0
55 TraesCS6D01G156700 chr1A 89.655 87 7 2 6112 6197 530756659 530756574 7.130000e-20 110.0
56 TraesCS6D01G156700 chr5B 89.655 87 7 2 6112 6197 134923466 134923381 7.130000e-20 110.0
57 TraesCS6D01G156700 chr2A 88.506 87 6 2 6112 6196 3793107 3793023 1.190000e-17 102.0
58 TraesCS6D01G156700 chr5A 86.813 91 8 3 6110 6198 544438882 544438970 1.540000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G156700 chr6D 133205969 133212695 6726 True 12423.000000 12423 100.000000 1 6727 1 chr6D.!!$R3 6726
1 TraesCS6D01G156700 chr6A 172111168 172117685 6517 True 1902.000000 5284 94.908600 1 6368 5 chr6A.!!$R1 6367
2 TraesCS6D01G156700 chr6B 231347792 231354401 6609 True 1315.142857 4294 93.699857 1 6367 7 chr6B.!!$R1 6366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
814 875 0.165944 ACTAAACTTGCATCACGCGC 59.834 50.000 5.73 0.0 46.97 6.86 F
1215 1283 0.524604 CATCGCACGTCATCACCGTA 60.525 55.000 0.00 0.0 36.65 4.02 F
1282 1579 0.813821 GCTCACCAGCAATTTCTCCC 59.186 55.000 0.00 0.0 46.06 4.30 F
2462 2772 1.148949 ACGGGGGTAGCGTTTGTTT 59.851 52.632 0.00 0.0 0.00 2.83 F
4327 5119 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1657 1954 0.609957 TTGGTCCAGCAGGCAATGAG 60.610 55.000 0.00 0.0 33.74 2.90 R
2389 2699 0.756294 TCTGCCTGGACGTTGAAGAA 59.244 50.000 0.00 0.0 0.00 2.52 R
3241 3554 1.069568 CGATAGTTGCCACGCACAAAA 60.070 47.619 0.00 0.0 38.71 2.44 R
4413 5205 0.894835 CCCCCGTCCCAAAATTCTTG 59.105 55.000 0.00 0.0 0.00 3.02 R
6044 6851 0.249398 ATCCGGTACCACACAAGCTC 59.751 55.000 13.54 0.0 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 2.420058 ATTCAACTGGAATCGTCCCC 57.580 50.000 0.00 0.00 42.62 4.81
104 105 1.815408 GCTCATGTCAAGTGGTGGTGT 60.815 52.381 0.00 0.00 0.00 4.16
143 144 8.862325 TGTTTGTCATATGTAATCCTTCAAGT 57.138 30.769 1.90 0.00 0.00 3.16
144 145 9.952030 TGTTTGTCATATGTAATCCTTCAAGTA 57.048 29.630 1.90 0.00 0.00 2.24
161 167 6.814506 TCAAGTAGTGGTCTGTACTTCTAC 57.185 41.667 0.00 0.00 37.37 2.59
171 177 6.151312 TGGTCTGTACTTCTACTCAGTTGATC 59.849 42.308 0.00 0.00 0.00 2.92
252 259 5.105146 TGGCACTGTGTTGGAAAAAGTATTT 60.105 36.000 9.86 0.00 42.41 1.40
290 297 8.685838 TTTTGTAACTTGTATAAGAGTTGGCT 57.314 30.769 6.19 0.00 36.79 4.75
292 299 6.999950 TGTAACTTGTATAAGAGTTGGCTGA 58.000 36.000 6.19 0.00 36.79 4.26
293 300 7.620880 TGTAACTTGTATAAGAGTTGGCTGAT 58.379 34.615 6.19 0.00 36.79 2.90
294 301 6.992063 AACTTGTATAAGAGTTGGCTGATG 57.008 37.500 6.19 0.00 37.36 3.07
295 302 6.299805 ACTTGTATAAGAGTTGGCTGATGA 57.700 37.500 6.19 0.00 37.36 2.92
296 303 6.893583 ACTTGTATAAGAGTTGGCTGATGAT 58.106 36.000 6.19 0.00 37.36 2.45
298 305 8.486210 ACTTGTATAAGAGTTGGCTGATGATAA 58.514 33.333 6.19 0.00 37.36 1.75
299 306 9.499479 CTTGTATAAGAGTTGGCTGATGATAAT 57.501 33.333 0.00 0.00 35.92 1.28
300 307 8.837788 TGTATAAGAGTTGGCTGATGATAATG 57.162 34.615 0.00 0.00 0.00 1.90
326 334 6.434018 GCATCTCTGCTTAGTTGAAATTCT 57.566 37.500 0.00 0.00 45.32 2.40
327 335 6.485393 GCATCTCTGCTTAGTTGAAATTCTC 58.515 40.000 0.00 0.00 45.32 2.87
328 336 6.315891 GCATCTCTGCTTAGTTGAAATTCTCT 59.684 38.462 0.00 0.00 45.32 3.10
329 337 7.465781 GCATCTCTGCTTAGTTGAAATTCTCTC 60.466 40.741 0.00 0.00 45.32 3.20
330 338 6.096036 TCTCTGCTTAGTTGAAATTCTCTCG 58.904 40.000 0.00 0.00 0.00 4.04
331 339 6.025749 TCTGCTTAGTTGAAATTCTCTCGA 57.974 37.500 0.00 0.00 0.00 4.04
364 376 4.282496 ACATCTCCCCGGCTTATCTATAG 58.718 47.826 0.00 0.00 0.00 1.31
365 377 4.264442 ACATCTCCCCGGCTTATCTATAGT 60.264 45.833 0.00 0.00 0.00 2.12
368 380 6.088541 TCTCCCCGGCTTATCTATAGTATT 57.911 41.667 0.00 0.00 0.00 1.89
370 382 7.645942 TCTCCCCGGCTTATCTATAGTATTAA 58.354 38.462 0.00 0.00 0.00 1.40
373 385 8.921205 TCCCCGGCTTATCTATAGTATTAATTC 58.079 37.037 0.00 0.00 0.00 2.17
374 386 8.701895 CCCCGGCTTATCTATAGTATTAATTCA 58.298 37.037 0.00 0.00 0.00 2.57
375 387 9.530633 CCCGGCTTATCTATAGTATTAATTCAC 57.469 37.037 0.00 0.00 0.00 3.18
392 440 9.877178 ATTAATTCACTTTGTTGTTTGTTACCA 57.123 25.926 0.00 0.00 0.00 3.25
393 441 7.826260 AATTCACTTTGTTGTTTGTTACCAG 57.174 32.000 0.00 0.00 0.00 4.00
399 447 7.595502 CACTTTGTTGTTTGTTACCAGTTTACA 59.404 33.333 0.00 0.00 0.00 2.41
400 448 8.142551 ACTTTGTTGTTTGTTACCAGTTTACAA 58.857 29.630 0.00 0.00 0.00 2.41
401 449 8.522178 TTTGTTGTTTGTTACCAGTTTACAAG 57.478 30.769 0.00 0.00 33.74 3.16
402 450 7.450124 TGTTGTTTGTTACCAGTTTACAAGA 57.550 32.000 0.00 0.00 33.74 3.02
403 451 7.883217 TGTTGTTTGTTACCAGTTTACAAGAA 58.117 30.769 0.00 0.00 33.74 2.52
404 452 8.358148 TGTTGTTTGTTACCAGTTTACAAGAAA 58.642 29.630 0.00 0.00 33.74 2.52
476 536 4.853924 TCATTGAAAGGAAAGAACAGGC 57.146 40.909 0.00 0.00 0.00 4.85
479 539 1.956477 TGAAAGGAAAGAACAGGCTGC 59.044 47.619 15.89 0.00 0.00 5.25
480 540 1.270826 GAAAGGAAAGAACAGGCTGCC 59.729 52.381 15.89 11.65 0.00 4.85
509 570 7.220875 GTCTGTTTTCCTGACTGACAAATTTTC 59.779 37.037 8.70 0.00 42.22 2.29
513 574 8.882736 GTTTTCCTGACTGACAAATTTTCATTT 58.117 29.630 0.00 0.00 32.36 2.32
724 785 0.466124 AGGCCGAGAAAGGTATGAGC 59.534 55.000 0.00 0.00 0.00 4.26
729 790 3.712187 CCGAGAAAGGTATGAGCTCTTC 58.288 50.000 16.19 9.05 0.00 2.87
755 816 2.807108 GCCCTGCCTCTCCTTTTATACG 60.807 54.545 0.00 0.00 0.00 3.06
762 823 3.304794 CCTCTCCTTTTATACGCCTCTCG 60.305 52.174 0.00 0.00 45.38 4.04
779 840 4.459089 GCGGCTCCCTCCACTCAC 62.459 72.222 0.00 0.00 0.00 3.51
811 872 2.159627 GTGGGACTAAACTTGCATCACG 59.840 50.000 0.00 0.00 0.00 4.35
813 874 1.201921 GGACTAAACTTGCATCACGCG 60.202 52.381 3.53 3.53 46.97 6.01
814 875 0.165944 ACTAAACTTGCATCACGCGC 59.834 50.000 5.73 0.00 46.97 6.86
815 876 0.853224 CTAAACTTGCATCACGCGCG 60.853 55.000 30.96 30.96 46.97 6.86
817 878 2.498761 AAACTTGCATCACGCGCGAG 62.499 55.000 39.36 30.24 46.97 5.03
844 905 1.520342 GAGCGCTCTGTGTGGGATC 60.520 63.158 29.88 0.00 0.00 3.36
845 906 1.954362 GAGCGCTCTGTGTGGGATCT 61.954 60.000 29.88 0.00 31.55 2.75
852 913 0.532573 CTGTGTGGGATCTGCGTAGT 59.467 55.000 0.00 0.00 0.00 2.73
859 920 0.750850 GGATCTGCGTAGTTGGGCTA 59.249 55.000 0.00 0.00 0.00 3.93
871 933 6.626402 GCGTAGTTGGGCTATTTTAACCAAAT 60.626 38.462 0.00 0.00 43.88 2.32
1215 1283 0.524604 CATCGCACGTCATCACCGTA 60.525 55.000 0.00 0.00 36.65 4.02
1225 1293 3.212685 GTCATCACCGTACCTAGCTACT 58.787 50.000 0.00 0.00 0.00 2.57
1233 1301 2.613133 CGTACCTAGCTACTCAGGTGAC 59.387 54.545 15.01 8.77 44.93 3.67
1234 1302 2.146920 ACCTAGCTACTCAGGTGACC 57.853 55.000 5.06 0.00 43.64 4.02
1235 1303 1.641714 ACCTAGCTACTCAGGTGACCT 59.358 52.381 5.06 0.00 43.64 3.85
1242 1310 1.080638 ACTCAGGTGACCTCCTCTCT 58.919 55.000 0.00 0.00 35.37 3.10
1245 1313 1.034838 CAGGTGACCTCCTCTCTCCG 61.035 65.000 0.00 0.00 35.37 4.63
1246 1314 2.419739 GGTGACCTCCTCTCTCCGC 61.420 68.421 0.00 0.00 0.00 5.54
1249 1317 4.467107 ACCTCCTCTCTCCGCCCC 62.467 72.222 0.00 0.00 0.00 5.80
1282 1579 0.813821 GCTCACCAGCAATTTCTCCC 59.186 55.000 0.00 0.00 46.06 4.30
1285 1582 1.428912 TCACCAGCAATTTCTCCCCTT 59.571 47.619 0.00 0.00 0.00 3.95
1290 1587 4.026052 CCAGCAATTTCTCCCCTTGTAAT 58.974 43.478 0.00 0.00 0.00 1.89
1317 1614 4.883021 AGACCTAGAACCCTATCTGACA 57.117 45.455 0.00 0.00 0.00 3.58
1657 1954 1.153997 GGCGACGACTTCTCAGTCC 60.154 63.158 0.00 0.00 46.19 3.85
1773 2082 7.998580 AGTGATTTGCCATTGTTTTGATTTTT 58.001 26.923 0.00 0.00 0.00 1.94
1815 2124 9.669353 CTTGCATTTCAGGTTATGTAATATGTC 57.331 33.333 0.00 0.00 28.77 3.06
2046 2356 4.037208 ACCAGAAATCAAAGCAGTTCAGTG 59.963 41.667 0.00 0.00 0.00 3.66
2081 2391 5.562298 ACAGGAAAGTAACTGGTACACAT 57.438 39.130 5.55 0.00 39.00 3.21
2133 2443 1.885887 GGCAATGTCTACCAGCAAACA 59.114 47.619 0.00 0.00 0.00 2.83
2285 2595 4.578928 GGTTAACTGAATCCGCCACATTAT 59.421 41.667 5.42 0.00 0.00 1.28
2324 2634 2.289444 TGCAAGTCCCTAACTTCTTCCG 60.289 50.000 0.00 0.00 45.28 4.30
2418 2728 3.055094 ACGTCCAGGCAGATCTTGTAAAT 60.055 43.478 0.00 0.00 0.00 1.40
2462 2772 1.148949 ACGGGGGTAGCGTTTGTTT 59.851 52.632 0.00 0.00 0.00 2.83
2598 2909 2.079925 GGGACAGATGAGCAAACAGAC 58.920 52.381 0.00 0.00 0.00 3.51
2901 3212 4.992381 ATTAGTTGACGCTCAAACAGAC 57.008 40.909 2.65 0.00 38.22 3.51
2931 3242 5.749620 AGACGTATTTCAGTGCTAGATACG 58.250 41.667 17.68 17.68 46.44 3.06
2960 3271 1.549170 AGCGTCAACTAATTCCGGACT 59.451 47.619 1.83 0.00 0.00 3.85
3113 3425 4.357018 TGTATCAGTTGAGCTACTGTCG 57.643 45.455 14.77 0.00 44.62 4.35
3241 3554 7.492669 GCGGATATAAGCATATGTTGTAGATGT 59.507 37.037 4.29 0.00 30.65 3.06
3510 3826 7.949690 AAATGGAGTTTGAGATTGATGATGA 57.050 32.000 0.00 0.00 0.00 2.92
3511 3827 8.534954 AAATGGAGTTTGAGATTGATGATGAT 57.465 30.769 0.00 0.00 0.00 2.45
3512 3828 6.937436 TGGAGTTTGAGATTGATGATGATG 57.063 37.500 0.00 0.00 0.00 3.07
3516 3832 8.896744 GGAGTTTGAGATTGATGATGATGTTAA 58.103 33.333 0.00 0.00 0.00 2.01
3549 3865 1.087501 GCAGAGATCCCAAAACGACC 58.912 55.000 0.00 0.00 0.00 4.79
3669 3985 3.120060 GGTACAAGCAGTTCAGCATTCAG 60.120 47.826 0.00 0.00 36.85 3.02
3753 4069 2.629051 CCCGCTAACTTAGTTCCCTTG 58.371 52.381 0.00 0.00 0.00 3.61
3757 4073 3.678548 CGCTAACTTAGTTCCCTTGACAC 59.321 47.826 0.00 0.00 0.00 3.67
3940 4527 9.923143 TTCCTATAGTGATGTTTCATATAACCG 57.077 33.333 0.00 0.00 33.56 4.44
3965 4552 9.454585 CGAATATCACTGAAATAATTGCAACAT 57.545 29.630 0.00 0.00 0.00 2.71
3978 4565 1.746787 TGCAACATATTCCTGCAGCAG 59.253 47.619 16.23 16.23 41.01 4.24
3998 4585 0.306840 CGCGCGTGGTATCTTCTCTA 59.693 55.000 24.19 0.00 0.00 2.43
4117 4704 5.808042 ATATCAAGTGTTGCAGCAGTAAG 57.192 39.130 11.60 7.74 0.00 2.34
4192 4895 5.693769 TTTTGGGACAGAGGGAGTATAAG 57.306 43.478 0.00 0.00 42.39 1.73
4313 5105 6.097356 TGAATACGTTCAGGTTCTGATGTAC 58.903 40.000 0.00 0.00 40.39 2.90
4314 5106 5.916661 ATACGTTCAGGTTCTGATGTACT 57.083 39.130 0.00 0.00 40.39 2.73
4315 5107 4.175787 ACGTTCAGGTTCTGATGTACTC 57.824 45.455 0.00 0.00 40.39 2.59
4316 5108 3.056749 ACGTTCAGGTTCTGATGTACTCC 60.057 47.826 0.00 0.00 40.39 3.85
4317 5109 3.676324 CGTTCAGGTTCTGATGTACTCCC 60.676 52.174 0.00 0.00 40.39 4.30
4318 5110 3.474798 TCAGGTTCTGATGTACTCCCT 57.525 47.619 0.00 0.00 35.39 4.20
4319 5111 3.366396 TCAGGTTCTGATGTACTCCCTC 58.634 50.000 0.00 0.00 35.39 4.30
4320 5112 2.432510 CAGGTTCTGATGTACTCCCTCC 59.567 54.545 0.00 0.00 32.44 4.30
4321 5113 1.409427 GGTTCTGATGTACTCCCTCCG 59.591 57.143 0.00 0.00 0.00 4.63
4322 5114 2.100989 GTTCTGATGTACTCCCTCCGT 58.899 52.381 0.00 0.00 0.00 4.69
4323 5115 2.054232 TCTGATGTACTCCCTCCGTC 57.946 55.000 0.00 0.00 0.00 4.79
4324 5116 1.033574 CTGATGTACTCCCTCCGTCC 58.966 60.000 0.00 0.00 0.00 4.79
4325 5117 0.396695 TGATGTACTCCCTCCGTCCC 60.397 60.000 0.00 0.00 0.00 4.46
4326 5118 0.396695 GATGTACTCCCTCCGTCCCA 60.397 60.000 0.00 0.00 0.00 4.37
4327 5119 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
4328 5120 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
4329 5121 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
4330 5122 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
4331 5123 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
4332 5124 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
4333 5125 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
4334 5126 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
4335 5127 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
4336 5128 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
4337 5129 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
4338 5130 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
4339 5131 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
4340 5132 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
4341 5133 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
4342 5134 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4343 5135 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4344 5136 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4345 5137 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
4346 5138 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
4347 5139 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
4348 5140 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
4349 5141 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
4357 5149 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
4358 5150 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
4360 5152 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
4361 5153 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
4368 5160 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
4369 5161 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
4370 5162 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
4371 5163 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
4372 5164 7.919091 GTCTAAATACGGATGTATCAAGTCACA 59.081 37.037 0.00 0.00 40.42 3.58
4373 5165 6.903883 AAATACGGATGTATCAAGTCACAC 57.096 37.500 0.00 0.00 40.42 3.82
4374 5166 5.854010 ATACGGATGTATCAAGTCACACT 57.146 39.130 0.00 0.00 36.56 3.55
4375 5167 4.537135 ACGGATGTATCAAGTCACACTT 57.463 40.909 0.00 0.00 39.39 3.16
4376 5168 4.894784 ACGGATGTATCAAGTCACACTTT 58.105 39.130 0.00 0.00 36.03 2.66
4377 5169 6.032956 ACGGATGTATCAAGTCACACTTTA 57.967 37.500 0.00 0.00 36.03 1.85
4378 5170 6.100004 ACGGATGTATCAAGTCACACTTTAG 58.900 40.000 0.00 0.00 36.03 1.85
4379 5171 6.100004 CGGATGTATCAAGTCACACTTTAGT 58.900 40.000 0.00 0.00 36.03 2.24
4380 5172 7.094075 ACGGATGTATCAAGTCACACTTTAGTA 60.094 37.037 0.00 0.00 36.03 1.82
4381 5173 7.921214 CGGATGTATCAAGTCACACTTTAGTAT 59.079 37.037 0.00 0.00 36.03 2.12
4382 5174 9.601217 GGATGTATCAAGTCACACTTTAGTATT 57.399 33.333 0.00 0.00 36.03 1.89
4393 5185 9.395707 GTCACACTTTAGTATTAGATACATCCG 57.604 37.037 1.42 0.00 38.21 4.18
4394 5186 9.128404 TCACACTTTAGTATTAGATACATCCGT 57.872 33.333 1.42 0.00 38.21 4.69
4411 5203 7.367159 ACATCCGTATCTAGACGAATCTAAG 57.633 40.000 5.60 0.00 45.82 2.18
4412 5204 7.160049 ACATCCGTATCTAGACGAATCTAAGA 58.840 38.462 5.60 0.00 45.82 2.10
4413 5205 7.118101 ACATCCGTATCTAGACGAATCTAAGAC 59.882 40.741 5.60 0.00 45.82 3.01
4414 5206 6.519382 TCCGTATCTAGACGAATCTAAGACA 58.481 40.000 5.60 0.00 45.82 3.41
4415 5207 6.988580 TCCGTATCTAGACGAATCTAAGACAA 59.011 38.462 5.60 0.00 45.82 3.18
4416 5208 7.171167 TCCGTATCTAGACGAATCTAAGACAAG 59.829 40.741 5.60 0.00 45.82 3.16
4417 5209 7.171167 CCGTATCTAGACGAATCTAAGACAAGA 59.829 40.741 5.60 0.00 45.82 3.02
4418 5210 8.549548 CGTATCTAGACGAATCTAAGACAAGAA 58.450 37.037 0.00 0.00 45.82 2.52
4424 5216 8.034058 AGACGAATCTAAGACAAGAATTTTGG 57.966 34.615 0.00 0.00 31.46 3.28
4425 5217 7.119846 AGACGAATCTAAGACAAGAATTTTGGG 59.880 37.037 0.00 0.00 31.46 4.12
4426 5218 6.940298 ACGAATCTAAGACAAGAATTTTGGGA 59.060 34.615 0.00 0.00 0.00 4.37
4427 5219 7.094762 ACGAATCTAAGACAAGAATTTTGGGAC 60.095 37.037 0.00 0.00 0.00 4.46
4428 5220 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4429 5221 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4430 5222 2.514803 AGACAAGAATTTTGGGACGGG 58.485 47.619 0.00 0.00 0.00 5.28
4431 5223 1.544246 GACAAGAATTTTGGGACGGGG 59.456 52.381 0.00 0.00 0.00 5.73
4432 5224 0.894835 CAAGAATTTTGGGACGGGGG 59.105 55.000 0.00 0.00 0.00 5.40
4583 5375 0.532573 AGTGTACATGCTGGTCTCCG 59.467 55.000 0.00 0.00 0.00 4.63
4766 5561 5.449297 TCCCAGGTTGATATGAATGACAA 57.551 39.130 0.00 0.00 0.00 3.18
4842 5637 5.902681 TCTCTAACCCATATGAGTTTGACG 58.097 41.667 7.99 6.37 0.00 4.35
4859 5654 8.918961 AGTTTGACGTCTTCTATCTTATTGAG 57.081 34.615 17.92 0.00 0.00 3.02
4878 5674 3.236816 GAGGTTGCATTGTTGATGAACG 58.763 45.455 0.00 0.00 38.03 3.95
4910 5706 2.867287 TGTCACTGTGCAAACAATGG 57.133 45.000 2.12 0.00 0.00 3.16
5090 5886 6.886459 ACATTTCACATAATTCACTACTGGCT 59.114 34.615 0.00 0.00 0.00 4.75
5111 5907 2.304761 TCCGGGAGCAACAAGATAAGTT 59.695 45.455 0.00 0.00 0.00 2.66
5171 5967 3.737559 ATCCAAGTTCCTTATGTGGCA 57.262 42.857 0.00 0.00 0.00 4.92
5216 6012 2.163010 GCTACATGCTGAAATGCACACT 59.837 45.455 0.00 0.00 46.33 3.55
5324 6120 6.116126 GCAGAATCTTCTTACACTAATGGGT 58.884 40.000 0.00 0.00 34.74 4.51
5483 6279 9.781633 TTACTGCTTAAAAGTTGGTGTCTATAA 57.218 29.630 0.00 0.00 0.00 0.98
5484 6280 8.095937 ACTGCTTAAAAGTTGGTGTCTATAAC 57.904 34.615 0.00 0.00 0.00 1.89
5485 6281 7.937394 ACTGCTTAAAAGTTGGTGTCTATAACT 59.063 33.333 0.00 0.00 36.29 2.24
5486 6282 8.319143 TGCTTAAAAGTTGGTGTCTATAACTC 57.681 34.615 0.00 0.00 33.82 3.01
5487 6283 8.154856 TGCTTAAAAGTTGGTGTCTATAACTCT 58.845 33.333 0.00 0.00 33.82 3.24
5488 6284 9.649167 GCTTAAAAGTTGGTGTCTATAACTCTA 57.351 33.333 0.00 0.00 33.82 2.43
5636 6432 3.214328 ACTGCTTTTCGTGGATCAACTT 58.786 40.909 0.00 0.00 0.00 2.66
5721 6517 4.714632 ACCGAAACCTATTATCACCATGG 58.285 43.478 11.19 11.19 0.00 3.66
5787 6583 2.622436 GATTGGAACTCTGTTCCTCCG 58.378 52.381 24.25 0.00 39.31 4.63
5850 6646 8.295569 GTGACGAACACTAAATTTACTCTTCT 57.704 34.615 9.42 0.00 45.13 2.85
5851 6647 8.762426 GTGACGAACACTAAATTTACTCTTCTT 58.238 33.333 9.42 0.00 45.13 2.52
5852 6648 9.321562 TGACGAACACTAAATTTACTCTTCTTT 57.678 29.630 0.00 0.00 0.00 2.52
5854 6650 9.931210 ACGAACACTAAATTTACTCTTCTTTTG 57.069 29.630 0.00 0.00 0.00 2.44
5865 6672 4.464947 ACTCTTCTTTTGCTGGCTTTAGT 58.535 39.130 0.00 0.00 0.00 2.24
5898 6705 0.823460 TCTGTATGTGGCTGCATCGA 59.177 50.000 0.50 0.00 0.00 3.59
6043 6850 7.494298 GGGAGCTTGAAAACATGTTTAAAAGAA 59.506 33.333 31.00 17.82 31.84 2.52
6044 6851 8.542953 GGAGCTTGAAAACATGTTTAAAAGAAG 58.457 33.333 31.00 23.53 31.84 2.85
6045 6852 9.301153 GAGCTTGAAAACATGTTTAAAAGAAGA 57.699 29.630 31.00 13.08 31.84 2.87
6046 6853 9.305925 AGCTTGAAAACATGTTTAAAAGAAGAG 57.694 29.630 31.00 19.31 31.84 2.85
6047 6854 8.058328 GCTTGAAAACATGTTTAAAAGAAGAGC 58.942 33.333 31.00 22.81 31.84 4.09
6048 6855 9.305925 CTTGAAAACATGTTTAAAAGAAGAGCT 57.694 29.630 26.71 10.45 31.84 4.09
6097 6904 2.348666 CGAGGTCACCTTTAGCATTTCG 59.651 50.000 0.00 0.00 31.76 3.46
6099 6906 4.000988 GAGGTCACCTTTAGCATTTCGAA 58.999 43.478 0.00 0.00 31.76 3.71
6162 6971 7.065085 AGCGTTTAGATCACTACTTTAGTCGTA 59.935 37.037 0.00 0.00 36.76 3.43
6220 7029 8.364129 ACATGCTTGGTTAATTTGTTTTGTAG 57.636 30.769 4.44 0.00 0.00 2.74
6291 7101 0.815095 GACACTTATTTTGGGGCGGG 59.185 55.000 0.00 0.00 0.00 6.13
6337 7152 7.666063 AAATGAGGCTAAGGCAAATAAAGAT 57.334 32.000 0.00 0.00 40.87 2.40
6368 7183 0.988678 AGGTAATGGAGGGCCCTCAC 60.989 60.000 44.88 34.73 44.40 3.51
6369 7184 1.532238 GTAATGGAGGGCCCTCACC 59.468 63.158 44.88 33.34 44.40 4.02
6370 7185 2.070039 TAATGGAGGGCCCTCACCG 61.070 63.158 44.88 0.00 44.40 4.94
6371 7186 2.539277 TAATGGAGGGCCCTCACCGA 62.539 60.000 44.88 28.77 44.40 4.69
6372 7187 3.943137 ATGGAGGGCCCTCACCGAA 62.943 63.158 44.88 27.71 44.40 4.30
6373 7188 3.327404 GGAGGGCCCTCACCGAAA 61.327 66.667 44.88 0.00 44.40 3.46
6374 7189 2.680370 GGAGGGCCCTCACCGAAAT 61.680 63.158 44.88 14.56 44.40 2.17
6375 7190 1.452108 GAGGGCCCTCACCGAAATG 60.452 63.158 41.69 0.00 42.31 2.32
6376 7191 2.198304 GAGGGCCCTCACCGAAATGT 62.198 60.000 41.69 9.47 42.31 2.71
6377 7192 2.046285 GGGCCCTCACCGAAATGTG 61.046 63.158 17.04 0.00 37.59 3.21
6378 7193 2.700773 GGCCCTCACCGAAATGTGC 61.701 63.158 0.00 0.00 36.17 4.57
6379 7194 2.700773 GCCCTCACCGAAATGTGCC 61.701 63.158 0.00 0.00 36.17 5.01
6380 7195 1.303236 CCCTCACCGAAATGTGCCA 60.303 57.895 0.00 0.00 36.17 4.92
6381 7196 0.680921 CCCTCACCGAAATGTGCCAT 60.681 55.000 0.00 0.00 36.17 4.40
6382 7197 0.734889 CCTCACCGAAATGTGCCATC 59.265 55.000 0.00 0.00 36.17 3.51
6383 7198 0.374758 CTCACCGAAATGTGCCATCG 59.625 55.000 0.00 0.00 36.17 3.84
6387 7202 1.721487 CGAAATGTGCCATCGGTCC 59.279 57.895 0.00 0.00 33.15 4.46
6388 7203 1.714899 CGAAATGTGCCATCGGTCCC 61.715 60.000 0.00 0.00 33.15 4.46
6389 7204 0.679640 GAAATGTGCCATCGGTCCCA 60.680 55.000 0.00 0.00 0.00 4.37
6390 7205 0.965363 AAATGTGCCATCGGTCCCAC 60.965 55.000 0.00 0.00 0.00 4.61
6391 7206 2.837031 AATGTGCCATCGGTCCCACC 62.837 60.000 0.00 0.00 34.05 4.61
6400 7215 4.058797 GGTCCCACCGAGTTTGTG 57.941 61.111 0.00 0.00 0.00 3.33
6401 7216 1.147600 GGTCCCACCGAGTTTGTGT 59.852 57.895 0.00 0.00 31.71 3.72
6402 7217 1.164041 GGTCCCACCGAGTTTGTGTG 61.164 60.000 0.00 0.00 31.71 3.82
6403 7218 0.179067 GTCCCACCGAGTTTGTGTGA 60.179 55.000 0.00 0.00 31.66 3.58
6404 7219 0.179067 TCCCACCGAGTTTGTGTGAC 60.179 55.000 0.00 0.00 31.66 3.67
6405 7220 0.462937 CCCACCGAGTTTGTGTGACA 60.463 55.000 0.00 0.00 31.66 3.58
6406 7221 0.655733 CCACCGAGTTTGTGTGACAC 59.344 55.000 9.14 9.14 34.56 3.67
6407 7222 0.655733 CACCGAGTTTGTGTGACACC 59.344 55.000 13.85 0.00 32.73 4.16
6408 7223 0.463116 ACCGAGTTTGTGTGACACCC 60.463 55.000 13.85 1.13 32.73 4.61
6409 7224 1.164041 CCGAGTTTGTGTGACACCCC 61.164 60.000 13.85 0.76 32.73 4.95
6410 7225 0.462937 CGAGTTTGTGTGACACCCCA 60.463 55.000 13.85 0.00 32.73 4.96
6411 7226 1.757682 GAGTTTGTGTGACACCCCAA 58.242 50.000 13.85 3.50 32.73 4.12
6412 7227 2.096248 GAGTTTGTGTGACACCCCAAA 58.904 47.619 13.85 13.53 32.73 3.28
6413 7228 2.494073 GAGTTTGTGTGACACCCCAAAA 59.506 45.455 13.85 4.08 32.73 2.44
6414 7229 3.103742 AGTTTGTGTGACACCCCAAAAT 58.896 40.909 13.85 14.77 32.73 1.82
6415 7230 3.517500 AGTTTGTGTGACACCCCAAAATT 59.482 39.130 13.85 1.10 32.73 1.82
6416 7231 4.019771 AGTTTGTGTGACACCCCAAAATTT 60.020 37.500 13.85 7.83 32.73 1.82
6417 7232 4.559862 TTGTGTGACACCCCAAAATTTT 57.440 36.364 13.85 0.00 32.73 1.82
6418 7233 3.866651 TGTGTGACACCCCAAAATTTTG 58.133 40.909 21.65 21.65 34.24 2.44
6419 7234 3.515502 TGTGTGACACCCCAAAATTTTGA 59.484 39.130 28.44 7.24 35.44 2.69
6420 7235 3.868661 GTGTGACACCCCAAAATTTTGAC 59.131 43.478 28.44 17.79 40.55 3.18
6421 7236 3.118592 TGTGACACCCCAAAATTTTGACC 60.119 43.478 28.44 12.60 40.55 4.02
6422 7237 3.133901 GTGACACCCCAAAATTTTGACCT 59.866 43.478 28.44 9.76 40.55 3.85
6423 7238 3.777522 TGACACCCCAAAATTTTGACCTT 59.222 39.130 28.44 11.07 40.55 3.50
6424 7239 4.126437 GACACCCCAAAATTTTGACCTTG 58.874 43.478 28.44 20.49 40.55 3.61
6425 7240 3.521531 ACACCCCAAAATTTTGACCTTGT 59.478 39.130 28.44 21.01 40.55 3.16
6426 7241 4.018870 ACACCCCAAAATTTTGACCTTGTT 60.019 37.500 28.44 6.96 40.55 2.83
6427 7242 4.946772 CACCCCAAAATTTTGACCTTGTTT 59.053 37.500 28.44 4.67 40.55 2.83
6428 7243 5.417266 CACCCCAAAATTTTGACCTTGTTTT 59.583 36.000 28.44 3.29 40.55 2.43
6429 7244 6.599638 CACCCCAAAATTTTGACCTTGTTTTA 59.400 34.615 28.44 0.00 40.55 1.52
6430 7245 7.284261 CACCCCAAAATTTTGACCTTGTTTTAT 59.716 33.333 28.44 1.97 40.55 1.40
6431 7246 7.836685 ACCCCAAAATTTTGACCTTGTTTTATT 59.163 29.630 28.44 0.00 40.55 1.40
6432 7247 8.690884 CCCCAAAATTTTGACCTTGTTTTATTT 58.309 29.630 28.44 0.00 40.55 1.40
6466 7281 8.567285 TTTTGCCAGAAAATAAAACTTTTCCA 57.433 26.923 5.84 0.00 43.17 3.53
6467 7282 8.744568 TTTGCCAGAAAATAAAACTTTTCCAT 57.255 26.923 5.84 0.00 43.17 3.41
6468 7283 8.744568 TTGCCAGAAAATAAAACTTTTCCATT 57.255 26.923 5.84 0.00 43.17 3.16
6469 7284 8.744568 TGCCAGAAAATAAAACTTTTCCATTT 57.255 26.923 5.84 0.00 43.17 2.32
6470 7285 8.619546 TGCCAGAAAATAAAACTTTTCCATTTG 58.380 29.630 5.84 0.00 43.17 2.32
6471 7286 8.620416 GCCAGAAAATAAAACTTTTCCATTTGT 58.380 29.630 5.84 0.00 43.17 2.83
6483 7298 8.445275 ACTTTTCCATTTGTCAAAATTTACCC 57.555 30.769 1.31 0.00 33.59 3.69
6484 7299 8.271458 ACTTTTCCATTTGTCAAAATTTACCCT 58.729 29.630 1.31 0.00 33.59 4.34
6485 7300 9.119418 CTTTTCCATTTGTCAAAATTTACCCTT 57.881 29.630 1.31 0.00 33.59 3.95
6486 7301 9.467796 TTTTCCATTTGTCAAAATTTACCCTTT 57.532 25.926 1.31 0.00 33.59 3.11
6487 7302 9.467796 TTTCCATTTGTCAAAATTTACCCTTTT 57.532 25.926 1.31 0.00 33.59 2.27
6488 7303 8.443953 TCCATTTGTCAAAATTTACCCTTTTG 57.556 30.769 1.31 2.85 42.33 2.44
6489 7304 8.049721 TCCATTTGTCAAAATTTACCCTTTTGT 58.950 29.630 1.31 0.00 41.88 2.83
6490 7305 8.681806 CCATTTGTCAAAATTTACCCTTTTGTT 58.318 29.630 1.31 0.00 41.88 2.83
6526 7341 6.860790 TTTTTACCTCTGGTGGAAAAACTT 57.139 33.333 0.00 0.00 36.19 2.66
6527 7342 6.860790 TTTTACCTCTGGTGGAAAAACTTT 57.139 33.333 0.00 0.00 36.19 2.66
6528 7343 6.459670 TTTACCTCTGGTGGAAAAACTTTC 57.540 37.500 0.00 0.00 36.19 2.62
6529 7344 3.976015 ACCTCTGGTGGAAAAACTTTCA 58.024 40.909 1.88 0.00 32.98 2.69
6530 7345 4.349365 ACCTCTGGTGGAAAAACTTTCAA 58.651 39.130 1.88 0.00 32.98 2.69
6531 7346 4.775253 ACCTCTGGTGGAAAAACTTTCAAA 59.225 37.500 1.88 0.00 32.98 2.69
6532 7347 5.247337 ACCTCTGGTGGAAAAACTTTCAAAA 59.753 36.000 1.88 0.00 32.98 2.44
6533 7348 5.812127 CCTCTGGTGGAAAAACTTTCAAAAG 59.188 40.000 0.97 0.97 41.73 2.27
6534 7349 5.729510 TCTGGTGGAAAAACTTTCAAAAGG 58.270 37.500 7.37 0.00 40.31 3.11
6535 7350 5.247337 TCTGGTGGAAAAACTTTCAAAAGGT 59.753 36.000 7.37 0.00 40.31 3.50
6536 7351 6.437793 TCTGGTGGAAAAACTTTCAAAAGGTA 59.562 34.615 7.37 0.00 40.31 3.08
6537 7352 7.125053 TCTGGTGGAAAAACTTTCAAAAGGTAT 59.875 33.333 7.37 0.00 40.31 2.73
6538 7353 7.625469 TGGTGGAAAAACTTTCAAAAGGTATT 58.375 30.769 7.37 0.00 40.31 1.89
6539 7354 7.550906 TGGTGGAAAAACTTTCAAAAGGTATTG 59.449 33.333 7.37 0.00 40.31 1.90
6540 7355 7.551262 GGTGGAAAAACTTTCAAAAGGTATTGT 59.449 33.333 7.37 0.00 40.31 2.71
6541 7356 8.941977 GTGGAAAAACTTTCAAAAGGTATTGTT 58.058 29.630 7.37 0.00 40.31 2.83
6542 7357 8.940952 TGGAAAAACTTTCAAAAGGTATTGTTG 58.059 29.630 7.37 0.00 40.31 3.33
6543 7358 8.394877 GGAAAAACTTTCAAAAGGTATTGTTGG 58.605 33.333 7.37 0.00 40.31 3.77
6544 7359 9.157104 GAAAAACTTTCAAAAGGTATTGTTGGA 57.843 29.630 7.37 0.00 40.31 3.53
6545 7360 8.487313 AAAACTTTCAAAAGGTATTGTTGGAC 57.513 30.769 7.37 0.00 40.31 4.02
6546 7361 7.418337 AACTTTCAAAAGGTATTGTTGGACT 57.582 32.000 7.37 0.00 40.31 3.85
6547 7362 7.418337 ACTTTCAAAAGGTATTGTTGGACTT 57.582 32.000 7.37 0.00 40.31 3.01
6548 7363 7.264947 ACTTTCAAAAGGTATTGTTGGACTTG 58.735 34.615 7.37 0.00 40.31 3.16
6549 7364 7.123547 ACTTTCAAAAGGTATTGTTGGACTTGA 59.876 33.333 7.37 0.00 40.31 3.02
6550 7365 7.411486 TTCAAAAGGTATTGTTGGACTTGAA 57.589 32.000 0.00 0.00 0.00 2.69
6551 7366 7.595819 TCAAAAGGTATTGTTGGACTTGAAT 57.404 32.000 0.00 0.00 0.00 2.57
6552 7367 8.698973 TCAAAAGGTATTGTTGGACTTGAATA 57.301 30.769 0.00 0.00 0.00 1.75
6553 7368 8.573035 TCAAAAGGTATTGTTGGACTTGAATAC 58.427 33.333 0.00 0.00 32.69 1.89
6554 7369 8.576442 CAAAAGGTATTGTTGGACTTGAATACT 58.424 33.333 0.00 0.00 33.58 2.12
6555 7370 7.923414 AAGGTATTGTTGGACTTGAATACTC 57.077 36.000 0.00 0.00 33.58 2.59
6556 7371 7.259088 AGGTATTGTTGGACTTGAATACTCT 57.741 36.000 0.00 0.00 33.58 3.24
6557 7372 7.331791 AGGTATTGTTGGACTTGAATACTCTC 58.668 38.462 0.00 0.00 33.58 3.20
6558 7373 7.181125 AGGTATTGTTGGACTTGAATACTCTCT 59.819 37.037 0.00 0.00 33.58 3.10
6559 7374 8.475639 GGTATTGTTGGACTTGAATACTCTCTA 58.524 37.037 0.00 0.00 33.58 2.43
6561 7376 8.954950 ATTGTTGGACTTGAATACTCTCTATG 57.045 34.615 0.00 0.00 0.00 2.23
6562 7377 7.718334 TGTTGGACTTGAATACTCTCTATGA 57.282 36.000 0.00 0.00 0.00 2.15
6563 7378 8.311395 TGTTGGACTTGAATACTCTCTATGAT 57.689 34.615 0.00 0.00 0.00 2.45
6564 7379 9.421399 TGTTGGACTTGAATACTCTCTATGATA 57.579 33.333 0.00 0.00 0.00 2.15
6603 7418 9.729281 ATCAGTGGATTTAAATTTGCAAGATTT 57.271 25.926 17.61 17.61 0.00 2.17
6604 7419 8.991026 TCAGTGGATTTAAATTTGCAAGATTTG 58.009 29.630 20.39 8.77 0.00 2.32
6605 7420 8.776470 CAGTGGATTTAAATTTGCAAGATTTGT 58.224 29.630 20.39 11.73 0.00 2.83
6606 7421 9.341078 AGTGGATTTAAATTTGCAAGATTTGTT 57.659 25.926 20.39 10.83 0.00 2.83
6607 7422 9.949174 GTGGATTTAAATTTGCAAGATTTGTTT 57.051 25.926 20.39 10.96 0.00 2.83
6614 7429 8.721019 AAATTTGCAAGATTTGTTTTCTCAGA 57.279 26.923 14.64 0.00 0.00 3.27
6615 7430 7.941795 ATTTGCAAGATTTGTTTTCTCAGAG 57.058 32.000 0.00 0.00 0.00 3.35
6616 7431 4.863491 TGCAAGATTTGTTTTCTCAGAGC 58.137 39.130 0.00 0.00 0.00 4.09
6617 7432 4.581824 TGCAAGATTTGTTTTCTCAGAGCT 59.418 37.500 0.00 0.00 0.00 4.09
6618 7433 5.068198 TGCAAGATTTGTTTTCTCAGAGCTT 59.932 36.000 0.00 0.00 30.39 3.74
6619 7434 5.981915 GCAAGATTTGTTTTCTCAGAGCTTT 59.018 36.000 0.00 0.00 28.38 3.51
6620 7435 7.141363 GCAAGATTTGTTTTCTCAGAGCTTTA 58.859 34.615 0.00 0.00 28.38 1.85
6621 7436 7.811713 GCAAGATTTGTTTTCTCAGAGCTTTAT 59.188 33.333 0.00 0.00 28.38 1.40
6622 7437 9.688592 CAAGATTTGTTTTCTCAGAGCTTTATT 57.311 29.630 0.00 0.00 28.38 1.40
6654 7469 7.677454 AATGATTTCTTTTGAATTTGGAGCC 57.323 32.000 0.00 0.00 38.37 4.70
6655 7470 6.423776 TGATTTCTTTTGAATTTGGAGCCT 57.576 33.333 0.00 0.00 38.37 4.58
6656 7471 6.225318 TGATTTCTTTTGAATTTGGAGCCTG 58.775 36.000 0.00 0.00 38.37 4.85
6657 7472 5.612725 TTTCTTTTGAATTTGGAGCCTGT 57.387 34.783 0.00 0.00 38.37 4.00
6658 7473 5.612725 TTCTTTTGAATTTGGAGCCTGTT 57.387 34.783 0.00 0.00 32.77 3.16
6659 7474 5.612725 TCTTTTGAATTTGGAGCCTGTTT 57.387 34.783 0.00 0.00 0.00 2.83
6660 7475 5.988287 TCTTTTGAATTTGGAGCCTGTTTT 58.012 33.333 0.00 0.00 0.00 2.43
6661 7476 7.118496 TCTTTTGAATTTGGAGCCTGTTTTA 57.882 32.000 0.00 0.00 0.00 1.52
6662 7477 6.983890 TCTTTTGAATTTGGAGCCTGTTTTAC 59.016 34.615 0.00 0.00 0.00 2.01
6663 7478 5.860941 TTGAATTTGGAGCCTGTTTTACA 57.139 34.783 0.00 0.00 0.00 2.41
6664 7479 5.195001 TGAATTTGGAGCCTGTTTTACAC 57.805 39.130 0.00 0.00 0.00 2.90
6665 7480 4.892934 TGAATTTGGAGCCTGTTTTACACT 59.107 37.500 0.00 0.00 0.00 3.55
6666 7481 6.065374 TGAATTTGGAGCCTGTTTTACACTA 58.935 36.000 0.00 0.00 0.00 2.74
6667 7482 5.959618 ATTTGGAGCCTGTTTTACACTAC 57.040 39.130 0.00 0.00 0.00 2.73
6668 7483 4.425180 TTGGAGCCTGTTTTACACTACA 57.575 40.909 0.00 0.00 0.00 2.74
6669 7484 4.425180 TGGAGCCTGTTTTACACTACAA 57.575 40.909 0.00 0.00 0.00 2.41
6670 7485 4.131596 TGGAGCCTGTTTTACACTACAAC 58.868 43.478 0.00 0.00 0.00 3.32
6671 7486 3.501062 GGAGCCTGTTTTACACTACAACC 59.499 47.826 0.00 0.00 0.00 3.77
6672 7487 4.131596 GAGCCTGTTTTACACTACAACCA 58.868 43.478 0.00 0.00 0.00 3.67
6673 7488 4.725490 AGCCTGTTTTACACTACAACCAT 58.275 39.130 0.00 0.00 0.00 3.55
6674 7489 5.137551 AGCCTGTTTTACACTACAACCATT 58.862 37.500 0.00 0.00 0.00 3.16
6675 7490 5.596772 AGCCTGTTTTACACTACAACCATTT 59.403 36.000 0.00 0.00 0.00 2.32
6676 7491 5.689961 GCCTGTTTTACACTACAACCATTTG 59.310 40.000 0.00 0.00 38.83 2.32
6677 7492 6.460399 GCCTGTTTTACACTACAACCATTTGA 60.460 38.462 0.00 0.00 36.48 2.69
6678 7493 6.915843 CCTGTTTTACACTACAACCATTTGAC 59.084 38.462 0.00 0.00 36.48 3.18
6679 7494 7.392494 TGTTTTACACTACAACCATTTGACA 57.608 32.000 0.00 0.00 36.48 3.58
6680 7495 7.827701 TGTTTTACACTACAACCATTTGACAA 58.172 30.769 0.00 0.00 36.48 3.18
6681 7496 8.304596 TGTTTTACACTACAACCATTTGACAAA 58.695 29.630 2.48 2.48 36.48 2.83
6682 7497 9.308318 GTTTTACACTACAACCATTTGACAAAT 57.692 29.630 7.62 7.62 36.48 2.32
6683 7498 8.864069 TTTACACTACAACCATTTGACAAATG 57.136 30.769 27.12 27.12 46.09 2.32
6684 7499 5.288804 ACACTACAACCATTTGACAAATGC 58.711 37.500 28.20 0.00 45.36 3.56
6685 7500 5.163468 ACACTACAACCATTTGACAAATGCA 60.163 36.000 28.20 13.27 45.36 3.96
6686 7501 5.927689 CACTACAACCATTTGACAAATGCAT 59.072 36.000 28.20 18.45 45.36 3.96
6687 7502 6.424509 CACTACAACCATTTGACAAATGCATT 59.575 34.615 28.20 22.03 45.36 3.56
6688 7503 6.991531 ACTACAACCATTTGACAAATGCATTT 59.008 30.769 28.20 18.99 45.36 2.32
6689 7504 8.147058 ACTACAACCATTTGACAAATGCATTTA 58.853 29.630 28.20 17.10 45.36 1.40
6690 7505 7.798596 ACAACCATTTGACAAATGCATTTAA 57.201 28.000 28.20 14.87 45.36 1.52
6691 7506 7.863666 ACAACCATTTGACAAATGCATTTAAG 58.136 30.769 28.20 15.06 45.36 1.85
6692 7507 7.714377 ACAACCATTTGACAAATGCATTTAAGA 59.286 29.630 28.20 8.95 45.36 2.10
6693 7508 8.723311 CAACCATTTGACAAATGCATTTAAGAT 58.277 29.630 28.20 10.25 45.36 2.40
6694 7509 8.851541 ACCATTTGACAAATGCATTTAAGATT 57.148 26.923 28.20 6.72 45.36 2.40
6695 7510 9.287373 ACCATTTGACAAATGCATTTAAGATTT 57.713 25.926 28.20 6.22 45.36 2.17
6696 7511 9.763465 CCATTTGACAAATGCATTTAAGATTTC 57.237 29.630 28.20 13.16 45.36 2.17
6697 7512 9.763465 CATTTGACAAATGCATTTAAGATTTCC 57.237 29.630 23.69 7.96 41.48 3.13
6698 7513 8.899427 TTTGACAAATGCATTTAAGATTTCCA 57.101 26.923 23.69 10.10 0.00 3.53
6699 7514 7.887996 TGACAAATGCATTTAAGATTTCCAC 57.112 32.000 23.69 7.13 0.00 4.02
6700 7515 6.873076 TGACAAATGCATTTAAGATTTCCACC 59.127 34.615 23.69 4.05 0.00 4.61
6701 7516 6.767456 ACAAATGCATTTAAGATTTCCACCA 58.233 32.000 23.69 0.00 0.00 4.17
6702 7517 7.222872 ACAAATGCATTTAAGATTTCCACCAA 58.777 30.769 23.69 0.00 0.00 3.67
6703 7518 7.718753 ACAAATGCATTTAAGATTTCCACCAAA 59.281 29.630 23.69 0.00 0.00 3.28
6704 7519 8.566260 CAAATGCATTTAAGATTTCCACCAAAA 58.434 29.630 23.69 0.00 0.00 2.44
6705 7520 8.866970 AATGCATTTAAGATTTCCACCAAAAT 57.133 26.923 5.99 0.00 0.00 1.82
6706 7521 8.866970 ATGCATTTAAGATTTCCACCAAAATT 57.133 26.923 0.00 0.00 0.00 1.82
6707 7522 8.688747 TGCATTTAAGATTTCCACCAAAATTT 57.311 26.923 0.00 0.00 0.00 1.82
6708 7523 8.566260 TGCATTTAAGATTTCCACCAAAATTTG 58.434 29.630 0.00 0.00 0.00 2.32
6721 7536 4.870123 CAAAATTTGGGATGTCAGGTGA 57.130 40.909 0.00 0.00 0.00 4.02
6722 7537 5.410355 CAAAATTTGGGATGTCAGGTGAT 57.590 39.130 0.00 0.00 0.00 3.06
6723 7538 5.172934 CAAAATTTGGGATGTCAGGTGATG 58.827 41.667 0.00 0.00 0.00 3.07
6724 7539 3.744940 ATTTGGGATGTCAGGTGATGT 57.255 42.857 0.00 0.00 0.00 3.06
6725 7540 3.524095 TTTGGGATGTCAGGTGATGTT 57.476 42.857 0.00 0.00 0.00 2.71
6726 7541 3.524095 TTGGGATGTCAGGTGATGTTT 57.476 42.857 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 142 6.124316 TGAGTAGAAGTACAGACCACTACT 57.876 41.667 0.00 0.00 42.49 2.57
143 144 6.124316 ACTGAGTAGAAGTACAGACCACTA 57.876 41.667 0.00 0.00 34.88 2.74
144 145 4.988029 ACTGAGTAGAAGTACAGACCACT 58.012 43.478 0.00 0.00 34.88 4.00
161 167 5.813080 TTCATGCATTCTGATCAACTGAG 57.187 39.130 0.00 0.00 0.00 3.35
225 231 0.453793 TTTCCAACACAGTGCCAACG 59.546 50.000 0.00 0.00 0.00 4.10
252 259 5.652994 AGTTACAAAAACTCAGTGCCAAA 57.347 34.783 0.00 0.00 0.00 3.28
288 295 4.632251 CAGAGATGCCTCATTATCATCAGC 59.368 45.833 0.00 0.00 41.87 4.26
290 297 4.286291 AGCAGAGATGCCTCATTATCATCA 59.714 41.667 0.00 0.00 41.87 3.07
292 299 4.912317 AGCAGAGATGCCTCATTATCAT 57.088 40.909 0.00 0.00 41.87 2.45
293 300 4.701651 AAGCAGAGATGCCTCATTATCA 57.298 40.909 0.00 0.00 41.87 2.15
294 301 5.792741 ACTAAGCAGAGATGCCTCATTATC 58.207 41.667 0.00 0.00 41.87 1.75
295 302 5.822132 ACTAAGCAGAGATGCCTCATTAT 57.178 39.130 0.00 0.00 41.87 1.28
296 303 5.129320 TCAACTAAGCAGAGATGCCTCATTA 59.871 40.000 0.00 0.00 41.87 1.90
298 305 3.453717 TCAACTAAGCAGAGATGCCTCAT 59.546 43.478 0.00 0.00 41.87 2.90
299 306 2.833943 TCAACTAAGCAGAGATGCCTCA 59.166 45.455 0.00 0.00 41.87 3.86
300 307 3.533606 TCAACTAAGCAGAGATGCCTC 57.466 47.619 0.00 0.00 39.72 4.70
320 328 6.683110 ATGTACCGCATACTTCGAGAGAATTT 60.683 38.462 0.00 0.00 42.15 1.82
323 331 3.630769 ATGTACCGCATACTTCGAGAGAA 59.369 43.478 0.00 0.00 41.35 2.87
325 333 3.251245 AGATGTACCGCATACTTCGAGAG 59.749 47.826 0.00 0.00 40.99 3.20
326 334 3.211865 AGATGTACCGCATACTTCGAGA 58.788 45.455 0.00 0.00 40.99 4.04
327 335 3.556513 GAGATGTACCGCATACTTCGAG 58.443 50.000 0.00 0.00 40.99 4.04
328 336 2.292569 GGAGATGTACCGCATACTTCGA 59.707 50.000 0.00 0.00 40.99 3.71
329 337 2.607282 GGGAGATGTACCGCATACTTCG 60.607 54.545 0.00 0.00 40.99 3.79
330 338 2.288886 GGGGAGATGTACCGCATACTTC 60.289 54.545 0.00 3.88 38.06 3.01
331 339 1.692519 GGGGAGATGTACCGCATACTT 59.307 52.381 0.00 0.00 38.06 2.24
412 460 9.357161 TCCACCTTTTGCTAATCTTAAACTAAA 57.643 29.630 0.00 0.00 0.00 1.85
420 468 4.460731 GCTTCTCCACCTTTTGCTAATCTT 59.539 41.667 0.00 0.00 0.00 2.40
424 472 2.158534 TGGCTTCTCCACCTTTTGCTAA 60.159 45.455 0.00 0.00 40.72 3.09
453 507 5.010415 AGCCTGTTCTTTCCTTTCAATGAAG 59.990 40.000 0.00 0.00 0.00 3.02
476 536 1.202806 TCAGGAAAACAGACAGGGCAG 60.203 52.381 0.00 0.00 0.00 4.85
479 539 2.104792 TCAGTCAGGAAAACAGACAGGG 59.895 50.000 0.00 0.00 38.01 4.45
480 540 3.134458 GTCAGTCAGGAAAACAGACAGG 58.866 50.000 0.00 0.00 38.01 4.00
509 570 1.881591 CACCCCAACCAAAGCAAATG 58.118 50.000 0.00 0.00 0.00 2.32
513 574 3.222855 CGCACCCCAACCAAAGCA 61.223 61.111 0.00 0.00 0.00 3.91
567 628 3.204467 TTGCTACTGGGGCCCACAC 62.204 63.158 24.76 11.83 0.00 3.82
597 658 2.332312 TTTGTGAGGGTGGTGGGTCG 62.332 60.000 0.00 0.00 0.00 4.79
762 823 4.459089 GTGAGTGGAGGGAGCCGC 62.459 72.222 0.00 0.00 38.73 6.53
844 905 4.201881 GGTTAAAATAGCCCAACTACGCAG 60.202 45.833 0.00 0.00 32.32 5.18
845 906 3.690628 GGTTAAAATAGCCCAACTACGCA 59.309 43.478 0.00 0.00 32.32 5.24
852 913 5.126384 CGGAGATTTGGTTAAAATAGCCCAA 59.874 40.000 0.00 0.00 38.64 4.12
859 920 4.159693 GGCCTTCGGAGATTTGGTTAAAAT 59.840 41.667 0.00 0.00 41.33 1.82
871 933 1.497309 ATGGTTTGGGCCTTCGGAGA 61.497 55.000 4.53 0.00 0.00 3.71
927 989 2.683968 CTGCTAAGCGTGTAGTTTGGA 58.316 47.619 0.00 0.00 0.00 3.53
1057 1125 2.551270 CTTGAACGGTGACTGCGC 59.449 61.111 0.00 0.00 0.00 6.09
1225 1293 0.333312 GGAGAGAGGAGGTCACCTGA 59.667 60.000 0.00 0.00 40.73 3.86
1274 1349 2.169769 TCGCGATTACAAGGGGAGAAAT 59.830 45.455 3.71 0.00 0.00 2.17
1279 1354 1.134907 GTCTTCGCGATTACAAGGGGA 60.135 52.381 10.88 0.00 0.00 4.81
1282 1579 2.295253 AGGTCTTCGCGATTACAAGG 57.705 50.000 10.88 0.00 0.00 3.61
1285 1582 3.181493 GGTTCTAGGTCTTCGCGATTACA 60.181 47.826 10.88 0.00 0.00 2.41
1290 1587 0.323178 AGGGTTCTAGGTCTTCGCGA 60.323 55.000 3.71 3.71 0.00 5.87
1657 1954 0.609957 TTGGTCCAGCAGGCAATGAG 60.610 55.000 0.00 0.00 33.74 2.90
1815 2124 5.929697 ACTACAAATGATGCATACGATGG 57.070 39.130 0.00 0.00 0.00 3.51
2046 2356 4.916870 ACTTTCCTGTTTACTTTCGTTGC 58.083 39.130 0.00 0.00 0.00 4.17
2081 2391 6.620877 TCTTTCCTTACTTATCTTCTGGCA 57.379 37.500 0.00 0.00 0.00 4.92
2133 2443 5.066505 GGATATTCTGTTTTCCACATCGCTT 59.933 40.000 0.00 0.00 33.76 4.68
2324 2634 6.581171 AACTGGTGAGATTTTGGAGATTTC 57.419 37.500 0.00 0.00 0.00 2.17
2389 2699 0.756294 TCTGCCTGGACGTTGAAGAA 59.244 50.000 0.00 0.00 0.00 2.52
2418 2728 7.092891 TGGCTTTCTCTATCAGATTAAGAACCA 60.093 37.037 6.65 8.60 0.00 3.67
2462 2772 3.712016 TGGGCAAACTCATAACTAGCA 57.288 42.857 0.00 0.00 0.00 3.49
2914 3225 5.584253 ACAGACGTATCTAGCACTGAAAT 57.416 39.130 0.00 0.00 32.25 2.17
2916 3227 5.048294 TCAAACAGACGTATCTAGCACTGAA 60.048 40.000 0.00 0.00 32.25 3.02
2917 3228 4.457949 TCAAACAGACGTATCTAGCACTGA 59.542 41.667 0.00 0.00 32.25 3.41
2918 3229 4.733850 TCAAACAGACGTATCTAGCACTG 58.266 43.478 0.00 0.00 32.25 3.66
2920 3231 3.548268 GCTCAAACAGACGTATCTAGCAC 59.452 47.826 0.00 0.00 33.46 4.40
2921 3232 3.730963 CGCTCAAACAGACGTATCTAGCA 60.731 47.826 0.00 0.00 33.01 3.49
2922 3233 2.784380 CGCTCAAACAGACGTATCTAGC 59.216 50.000 0.00 0.00 32.25 3.42
2931 3242 4.992381 ATTAGTTGACGCTCAAACAGAC 57.008 40.909 2.65 0.00 38.22 3.51
2960 3271 9.249053 TGTTTGCAAATATTTAATACTCCCTCA 57.751 29.630 16.21 0.00 0.00 3.86
3241 3554 1.069568 CGATAGTTGCCACGCACAAAA 60.070 47.619 0.00 0.00 38.71 2.44
3516 3832 6.958778 TGGGATCTCTGCTCTAGATTCATTAT 59.041 38.462 0.00 0.00 33.82 1.28
3549 3865 2.343758 CCAGTGGTGTGAGACGGG 59.656 66.667 0.00 0.00 0.00 5.28
3669 3985 9.507329 TGCCCTACTCTTATGAATCATTAATTC 57.493 33.333 0.00 0.00 43.54 2.17
3736 4052 3.678548 CGTGTCAAGGGAACTAAGTTAGC 59.321 47.826 9.92 0.00 42.68 3.09
3737 4053 3.678548 GCGTGTCAAGGGAACTAAGTTAG 59.321 47.826 8.41 8.41 42.68 2.34
3965 4552 2.891936 CGCGCTGCTGCAGGAATA 60.892 61.111 29.05 0.00 39.64 1.75
3978 4565 2.577785 GAGAAGATACCACGCGCGC 61.578 63.158 32.58 23.91 0.00 6.86
3985 4572 9.085645 TCAAGTACAAAACTAGAGAAGATACCA 57.914 33.333 0.00 0.00 37.50 3.25
4034 4621 6.365789 CCAAAACCGAATTGTACTACGAACTA 59.634 38.462 0.00 0.00 0.00 2.24
4039 4626 4.996062 ACCAAAACCGAATTGTACTACG 57.004 40.909 0.00 0.00 0.00 3.51
4117 4704 6.815089 AGCTATAGATTACCATGCTCTATGC 58.185 40.000 3.21 12.39 43.25 3.14
4153 4856 7.976734 TGTCCCAAAATTAGTGTGTTAACTTTG 59.023 33.333 7.22 6.46 32.47 2.77
4162 4865 3.758554 CCCTCTGTCCCAAAATTAGTGTG 59.241 47.826 0.00 0.00 0.00 3.82
4313 5105 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
4314 5106 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
4315 5107 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
4316 5108 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
4317 5109 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
4318 5110 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
4319 5111 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
4320 5112 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
4321 5113 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
4322 5114 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
4323 5115 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
4331 5123 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
4332 5124 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
4334 5126 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
4335 5127 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
4342 5134 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
4343 5135 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
4344 5136 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
4345 5137 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
4346 5138 7.919091 TGTGACTTGATACATCCGTATTTAGAC 59.081 37.037 0.00 0.00 38.48 2.59
4347 5139 7.919091 GTGTGACTTGATACATCCGTATTTAGA 59.081 37.037 0.00 0.00 38.48 2.10
4348 5140 7.921214 AGTGTGACTTGATACATCCGTATTTAG 59.079 37.037 0.00 0.00 38.48 1.85
4349 5141 7.778083 AGTGTGACTTGATACATCCGTATTTA 58.222 34.615 0.00 0.00 38.48 1.40
4350 5142 6.640518 AGTGTGACTTGATACATCCGTATTT 58.359 36.000 0.00 0.00 38.48 1.40
4351 5143 6.222038 AGTGTGACTTGATACATCCGTATT 57.778 37.500 0.00 0.00 38.48 1.89
4352 5144 5.854010 AGTGTGACTTGATACATCCGTAT 57.146 39.130 0.00 0.00 41.16 3.06
4353 5145 5.654603 AAGTGTGACTTGATACATCCGTA 57.345 39.130 0.00 0.00 37.00 4.02
4354 5146 4.537135 AAGTGTGACTTGATACATCCGT 57.463 40.909 0.00 0.00 37.00 4.69
4355 5147 6.100004 ACTAAAGTGTGACTTGATACATCCG 58.900 40.000 0.00 0.00 38.66 4.18
4356 5148 9.601217 AATACTAAAGTGTGACTTGATACATCC 57.399 33.333 0.00 0.00 38.66 3.51
4367 5159 9.395707 CGGATGTATCTAATACTAAAGTGTGAC 57.604 37.037 0.00 0.00 36.70 3.67
4368 5160 9.128404 ACGGATGTATCTAATACTAAAGTGTGA 57.872 33.333 0.00 0.00 36.70 3.58
4385 5177 9.100554 CTTAGATTCGTCTAGATACGGATGTAT 57.899 37.037 2.64 0.00 41.14 2.29
4386 5178 8.309656 TCTTAGATTCGTCTAGATACGGATGTA 58.690 37.037 2.64 1.02 41.14 2.29
4387 5179 7.118101 GTCTTAGATTCGTCTAGATACGGATGT 59.882 40.741 2.64 1.92 41.14 3.06
4388 5180 7.117956 TGTCTTAGATTCGTCTAGATACGGATG 59.882 40.741 2.64 0.00 41.14 3.51
4389 5181 7.160049 TGTCTTAGATTCGTCTAGATACGGAT 58.840 38.462 0.00 0.00 43.73 4.18
4390 5182 6.519382 TGTCTTAGATTCGTCTAGATACGGA 58.481 40.000 0.00 0.00 43.05 4.69
4391 5183 6.782298 TGTCTTAGATTCGTCTAGATACGG 57.218 41.667 0.00 0.00 43.05 4.02
4392 5184 8.074474 TCTTGTCTTAGATTCGTCTAGATACG 57.926 38.462 0.00 0.00 44.19 3.06
4398 5190 9.151471 CCAAAATTCTTGTCTTAGATTCGTCTA 57.849 33.333 0.00 0.00 0.00 2.59
4399 5191 7.119846 CCCAAAATTCTTGTCTTAGATTCGTCT 59.880 37.037 0.00 0.00 0.00 4.18
4400 5192 7.119262 TCCCAAAATTCTTGTCTTAGATTCGTC 59.881 37.037 0.00 0.00 0.00 4.20
4401 5193 6.940298 TCCCAAAATTCTTGTCTTAGATTCGT 59.060 34.615 0.00 0.00 0.00 3.85
4402 5194 7.244192 GTCCCAAAATTCTTGTCTTAGATTCG 58.756 38.462 0.00 0.00 0.00 3.34
4403 5195 7.244192 CGTCCCAAAATTCTTGTCTTAGATTC 58.756 38.462 0.00 0.00 0.00 2.52
4404 5196 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
4405 5197 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
4406 5198 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
4407 5199 4.156008 CCCGTCCCAAAATTCTTGTCTTAG 59.844 45.833 0.00 0.00 0.00 2.18
4408 5200 4.076394 CCCGTCCCAAAATTCTTGTCTTA 58.924 43.478 0.00 0.00 0.00 2.10
4409 5201 2.890945 CCCGTCCCAAAATTCTTGTCTT 59.109 45.455 0.00 0.00 0.00 3.01
4410 5202 2.514803 CCCGTCCCAAAATTCTTGTCT 58.485 47.619 0.00 0.00 0.00 3.41
4411 5203 1.544246 CCCCGTCCCAAAATTCTTGTC 59.456 52.381 0.00 0.00 0.00 3.18
4412 5204 1.627864 CCCCGTCCCAAAATTCTTGT 58.372 50.000 0.00 0.00 0.00 3.16
4413 5205 0.894835 CCCCCGTCCCAAAATTCTTG 59.105 55.000 0.00 0.00 0.00 3.02
4414 5206 3.374318 CCCCCGTCCCAAAATTCTT 57.626 52.632 0.00 0.00 0.00 2.52
4429 5221 9.642343 AGAAAAGAACATAAATTATACTCCCCC 57.358 33.333 0.00 0.00 0.00 5.40
4464 5256 8.142551 ACTATCTTGAAGTTCTCGTAGTGTTTT 58.857 33.333 4.17 0.00 0.00 2.43
4842 5637 8.341173 CAATGCAACCTCAATAAGATAGAAGAC 58.659 37.037 0.00 0.00 0.00 3.01
4859 5654 3.011949 ACGTTCATCAACAATGCAACC 57.988 42.857 0.00 0.00 35.17 3.77
4878 5674 2.614057 ACAGTGACAAGCAAAGCAGTAC 59.386 45.455 0.00 0.00 0.00 2.73
4910 5706 3.814283 TGTTACCACACCCGTCAAATTAC 59.186 43.478 0.00 0.00 0.00 1.89
4963 5759 1.151899 AGTTAGGGGACTGGCACCA 60.152 57.895 3.68 0.00 45.20 4.17
5090 5886 1.906574 ACTTATCTTGTTGCTCCCGGA 59.093 47.619 0.73 0.00 0.00 5.14
5171 5967 5.860182 CAGCAAGAATGTGAATTTGAATCGT 59.140 36.000 0.00 0.00 0.00 3.73
5216 6012 6.267471 AGGAAAGAATGGCAAACTAAATCACA 59.733 34.615 0.00 0.00 0.00 3.58
5271 6067 7.721399 AGAAAACTAATTGAGCCAAGAGAAGAA 59.279 33.333 0.00 0.00 0.00 2.52
5324 6120 5.759506 TTGAGTAAATCGTTGGCTGAAAA 57.240 34.783 0.00 0.00 0.00 2.29
5576 6372 2.102925 CTGCTCCCTCTCTTTCTCCATC 59.897 54.545 0.00 0.00 0.00 3.51
5636 6432 2.594013 TGATGCTGCACAACCGCA 60.594 55.556 3.57 0.00 40.32 5.69
5721 6517 5.637809 GACGAAGGTCCATTTGATTTAACC 58.362 41.667 0.00 0.00 37.19 2.85
5787 6583 6.705863 ATTTATCTCCCTTTTGCTGACATC 57.294 37.500 0.00 0.00 0.00 3.06
5844 6640 5.444663 AACTAAAGCCAGCAAAAGAAGAG 57.555 39.130 0.00 0.00 0.00 2.85
5845 6641 5.852282 AAACTAAAGCCAGCAAAAGAAGA 57.148 34.783 0.00 0.00 0.00 2.87
5846 6642 6.638468 CACTAAACTAAAGCCAGCAAAAGAAG 59.362 38.462 0.00 0.00 0.00 2.85
5847 6643 6.096282 ACACTAAACTAAAGCCAGCAAAAGAA 59.904 34.615 0.00 0.00 0.00 2.52
5848 6644 5.592688 ACACTAAACTAAAGCCAGCAAAAGA 59.407 36.000 0.00 0.00 0.00 2.52
5849 6645 5.831997 ACACTAAACTAAAGCCAGCAAAAG 58.168 37.500 0.00 0.00 0.00 2.27
5850 6646 5.845391 ACACTAAACTAAAGCCAGCAAAA 57.155 34.783 0.00 0.00 0.00 2.44
5851 6647 7.519032 AATACACTAAACTAAAGCCAGCAAA 57.481 32.000 0.00 0.00 0.00 3.68
5852 6648 7.519032 AAATACACTAAACTAAAGCCAGCAA 57.481 32.000 0.00 0.00 0.00 3.91
5853 6649 7.519032 AAAATACACTAAACTAAAGCCAGCA 57.481 32.000 0.00 0.00 0.00 4.41
6043 6850 0.830444 TCCGGTACCACACAAGCTCT 60.830 55.000 13.54 0.00 0.00 4.09
6044 6851 0.249398 ATCCGGTACCACACAAGCTC 59.751 55.000 13.54 0.00 0.00 4.09
6045 6852 1.563924 TATCCGGTACCACACAAGCT 58.436 50.000 13.54 0.00 0.00 3.74
6046 6853 2.102588 AGATATCCGGTACCACACAAGC 59.897 50.000 13.54 0.00 0.00 4.01
6047 6854 5.524971 TTAGATATCCGGTACCACACAAG 57.475 43.478 13.54 0.00 0.00 3.16
6048 6855 5.422970 AGTTTAGATATCCGGTACCACACAA 59.577 40.000 13.54 0.00 0.00 3.33
6097 6904 7.565680 TCAGAGGGAGTAACAAATTATCCTTC 58.434 38.462 0.00 0.00 36.64 3.46
6099 6906 7.403231 TCTTCAGAGGGAGTAACAAATTATCCT 59.597 37.037 0.00 0.00 0.00 3.24
6271 7081 0.815095 CCGCCCCAAAATAAGTGTCC 59.185 55.000 0.00 0.00 0.00 4.02
6337 7152 2.126882 CCATTACCTCTCCCATGTCCA 58.873 52.381 0.00 0.00 0.00 4.02
6383 7198 1.147600 ACACAAACTCGGTGGGACC 59.852 57.895 0.00 0.00 40.54 4.46
6384 7199 0.179067 TCACACAAACTCGGTGGGAC 60.179 55.000 0.00 0.00 43.37 4.46
6385 7200 0.179067 GTCACACAAACTCGGTGGGA 60.179 55.000 0.00 0.00 45.86 4.37
6386 7201 0.462937 TGTCACACAAACTCGGTGGG 60.463 55.000 0.00 0.00 41.03 4.61
6387 7202 0.655733 GTGTCACACAAACTCGGTGG 59.344 55.000 2.00 0.00 40.54 4.61
6388 7203 0.655733 GGTGTCACACAAACTCGGTG 59.344 55.000 10.85 0.00 41.95 4.94
6389 7204 0.463116 GGGTGTCACACAAACTCGGT 60.463 55.000 10.85 0.00 35.86 4.69
6390 7205 1.164041 GGGGTGTCACACAAACTCGG 61.164 60.000 10.85 0.00 35.86 4.63
6391 7206 0.462937 TGGGGTGTCACACAAACTCG 60.463 55.000 10.85 0.00 35.86 4.18
6392 7207 1.757682 TTGGGGTGTCACACAAACTC 58.242 50.000 10.85 0.00 35.86 3.01
6393 7208 2.223803 TTTGGGGTGTCACACAAACT 57.776 45.000 10.85 0.00 35.86 2.66
6394 7209 3.535280 ATTTTGGGGTGTCACACAAAC 57.465 42.857 18.87 0.00 35.86 2.93
6395 7210 4.559862 AAATTTTGGGGTGTCACACAAA 57.440 36.364 10.85 16.51 35.86 2.83
6396 7211 4.020218 TCAAAATTTTGGGGTGTCACACAA 60.020 37.500 26.45 7.82 38.66 3.33
6397 7212 3.515502 TCAAAATTTTGGGGTGTCACACA 59.484 39.130 26.45 1.37 38.66 3.72
6398 7213 3.868661 GTCAAAATTTTGGGGTGTCACAC 59.131 43.478 26.45 12.81 38.66 3.82
6399 7214 3.118592 GGTCAAAATTTTGGGGTGTCACA 60.119 43.478 26.45 5.26 38.66 3.58
6400 7215 3.133901 AGGTCAAAATTTTGGGGTGTCAC 59.866 43.478 26.45 16.54 38.66 3.67
6401 7216 3.379452 AGGTCAAAATTTTGGGGTGTCA 58.621 40.909 26.45 6.60 38.66 3.58
6402 7217 4.126437 CAAGGTCAAAATTTTGGGGTGTC 58.874 43.478 26.45 12.26 38.66 3.67
6403 7218 3.521531 ACAAGGTCAAAATTTTGGGGTGT 59.478 39.130 26.45 21.13 38.66 4.16
6404 7219 4.149511 ACAAGGTCAAAATTTTGGGGTG 57.850 40.909 26.45 20.63 38.66 4.61
6405 7220 4.853468 AACAAGGTCAAAATTTTGGGGT 57.147 36.364 26.45 15.89 38.66 4.95
6406 7221 7.815840 ATAAAACAAGGTCAAAATTTTGGGG 57.184 32.000 26.45 15.38 38.66 4.96
6440 7255 9.183368 TGGAAAAGTTTTATTTTCTGGCAAAAT 57.817 25.926 0.00 2.96 44.80 1.82
6441 7256 8.567285 TGGAAAAGTTTTATTTTCTGGCAAAA 57.433 26.923 0.00 0.00 44.80 2.44
6442 7257 8.744568 ATGGAAAAGTTTTATTTTCTGGCAAA 57.255 26.923 0.00 0.00 44.80 3.68
6443 7258 8.744568 AATGGAAAAGTTTTATTTTCTGGCAA 57.255 26.923 0.00 0.00 44.80 4.52
6444 7259 8.619546 CAAATGGAAAAGTTTTATTTTCTGGCA 58.380 29.630 0.00 0.00 44.80 4.92
6445 7260 8.620416 ACAAATGGAAAAGTTTTATTTTCTGGC 58.380 29.630 0.00 0.00 44.80 4.85
6457 7272 8.898761 GGGTAAATTTTGACAAATGGAAAAGTT 58.101 29.630 0.50 0.00 32.57 2.66
6458 7273 8.271458 AGGGTAAATTTTGACAAATGGAAAAGT 58.729 29.630 0.50 0.00 32.57 2.66
6459 7274 8.675705 AGGGTAAATTTTGACAAATGGAAAAG 57.324 30.769 0.50 0.00 32.57 2.27
6460 7275 9.467796 AAAGGGTAAATTTTGACAAATGGAAAA 57.532 25.926 0.50 0.00 32.57 2.29
6461 7276 9.467796 AAAAGGGTAAATTTTGACAAATGGAAA 57.532 25.926 0.50 0.00 32.57 3.13
6462 7277 8.897752 CAAAAGGGTAAATTTTGACAAATGGAA 58.102 29.630 0.50 0.00 46.01 3.53
6463 7278 8.049721 ACAAAAGGGTAAATTTTGACAAATGGA 58.950 29.630 15.77 0.00 46.01 3.41
6464 7279 8.219546 ACAAAAGGGTAAATTTTGACAAATGG 57.780 30.769 15.77 0.00 46.01 3.16
6503 7318 6.860790 AAGTTTTTCCACCAGAGGTAAAAA 57.139 33.333 5.81 5.81 38.89 1.94
6504 7319 6.437793 TGAAAGTTTTTCCACCAGAGGTAAAA 59.562 34.615 0.00 0.00 36.13 1.52
6505 7320 5.952947 TGAAAGTTTTTCCACCAGAGGTAAA 59.047 36.000 0.00 0.00 32.11 2.01
6506 7321 5.511363 TGAAAGTTTTTCCACCAGAGGTAA 58.489 37.500 0.00 0.00 32.11 2.85
6507 7322 5.118729 TGAAAGTTTTTCCACCAGAGGTA 57.881 39.130 0.00 0.00 32.11 3.08
6508 7323 3.976015 TGAAAGTTTTTCCACCAGAGGT 58.024 40.909 0.00 0.00 35.62 3.85
6509 7324 5.337578 TTTGAAAGTTTTTCCACCAGAGG 57.662 39.130 0.00 0.00 0.00 3.69
6510 7325 5.812127 CCTTTTGAAAGTTTTTCCACCAGAG 59.188 40.000 3.09 0.00 34.20 3.35
6511 7326 5.247337 ACCTTTTGAAAGTTTTTCCACCAGA 59.753 36.000 3.09 0.00 34.20 3.86
6512 7327 5.487433 ACCTTTTGAAAGTTTTTCCACCAG 58.513 37.500 3.09 0.00 34.20 4.00
6513 7328 5.491323 ACCTTTTGAAAGTTTTTCCACCA 57.509 34.783 3.09 0.00 34.20 4.17
6514 7329 7.551262 ACAATACCTTTTGAAAGTTTTTCCACC 59.449 33.333 3.09 0.00 34.20 4.61
6515 7330 8.487313 ACAATACCTTTTGAAAGTTTTTCCAC 57.513 30.769 3.09 0.00 34.20 4.02
6516 7331 8.940952 CAACAATACCTTTTGAAAGTTTTTCCA 58.059 29.630 3.09 0.00 34.20 3.53
6517 7332 8.394877 CCAACAATACCTTTTGAAAGTTTTTCC 58.605 33.333 3.09 0.00 34.20 3.13
6518 7333 9.157104 TCCAACAATACCTTTTGAAAGTTTTTC 57.843 29.630 3.09 0.00 34.20 2.29
6519 7334 8.941977 GTCCAACAATACCTTTTGAAAGTTTTT 58.058 29.630 3.09 0.00 34.20 1.94
6520 7335 8.318412 AGTCCAACAATACCTTTTGAAAGTTTT 58.682 29.630 3.09 0.00 34.20 2.43
6521 7336 7.847096 AGTCCAACAATACCTTTTGAAAGTTT 58.153 30.769 3.09 0.00 34.20 2.66
6522 7337 7.418337 AGTCCAACAATACCTTTTGAAAGTT 57.582 32.000 3.09 0.00 34.20 2.66
6523 7338 7.123547 TCAAGTCCAACAATACCTTTTGAAAGT 59.876 33.333 3.09 0.00 34.20 2.66
6524 7339 7.488322 TCAAGTCCAACAATACCTTTTGAAAG 58.512 34.615 0.00 0.00 35.79 2.62
6525 7340 7.411486 TCAAGTCCAACAATACCTTTTGAAA 57.589 32.000 0.00 0.00 0.00 2.69
6526 7341 7.411486 TTCAAGTCCAACAATACCTTTTGAA 57.589 32.000 0.00 0.00 31.76 2.69
6527 7342 7.595819 ATTCAAGTCCAACAATACCTTTTGA 57.404 32.000 0.00 0.00 0.00 2.69
6528 7343 8.576442 AGTATTCAAGTCCAACAATACCTTTTG 58.424 33.333 0.00 0.00 33.80 2.44
6529 7344 8.706322 AGTATTCAAGTCCAACAATACCTTTT 57.294 30.769 0.00 0.00 33.80 2.27
6530 7345 8.164070 AGAGTATTCAAGTCCAACAATACCTTT 58.836 33.333 0.00 0.00 33.80 3.11
6531 7346 7.690256 AGAGTATTCAAGTCCAACAATACCTT 58.310 34.615 0.00 0.00 33.80 3.50
6532 7347 7.181125 AGAGAGTATTCAAGTCCAACAATACCT 59.819 37.037 0.00 0.00 33.80 3.08
6533 7348 7.331791 AGAGAGTATTCAAGTCCAACAATACC 58.668 38.462 0.00 0.00 33.80 2.73
6536 7351 8.762645 TCATAGAGAGTATTCAAGTCCAACAAT 58.237 33.333 0.00 0.00 0.00 2.71
6537 7352 8.134202 TCATAGAGAGTATTCAAGTCCAACAA 57.866 34.615 0.00 0.00 0.00 2.83
6538 7353 7.718334 TCATAGAGAGTATTCAAGTCCAACA 57.282 36.000 0.00 0.00 0.00 3.33
6577 7392 9.729281 AAATCTTGCAAATTTAAATCCACTGAT 57.271 25.926 14.11 4.12 0.00 2.90
6578 7393 8.991026 CAAATCTTGCAAATTTAAATCCACTGA 58.009 29.630 14.85 2.28 0.00 3.41
6579 7394 8.776470 ACAAATCTTGCAAATTTAAATCCACTG 58.224 29.630 14.85 0.00 0.00 3.66
6580 7395 8.907222 ACAAATCTTGCAAATTTAAATCCACT 57.093 26.923 14.85 0.00 0.00 4.00
6581 7396 9.949174 AAACAAATCTTGCAAATTTAAATCCAC 57.051 25.926 14.85 0.00 0.00 4.02
6588 7403 9.814899 TCTGAGAAAACAAATCTTGCAAATTTA 57.185 25.926 14.85 0.00 0.00 1.40
6589 7404 8.721019 TCTGAGAAAACAAATCTTGCAAATTT 57.279 26.923 0.00 7.12 0.00 1.82
6590 7405 7.042254 GCTCTGAGAAAACAAATCTTGCAAATT 60.042 33.333 9.28 0.89 0.00 1.82
6591 7406 6.423001 GCTCTGAGAAAACAAATCTTGCAAAT 59.577 34.615 9.28 0.00 0.00 2.32
6592 7407 5.750067 GCTCTGAGAAAACAAATCTTGCAAA 59.250 36.000 9.28 0.00 0.00 3.68
6593 7408 5.068198 AGCTCTGAGAAAACAAATCTTGCAA 59.932 36.000 9.28 0.00 0.00 4.08
6594 7409 4.581824 AGCTCTGAGAAAACAAATCTTGCA 59.418 37.500 9.28 0.00 0.00 4.08
6595 7410 5.118642 AGCTCTGAGAAAACAAATCTTGC 57.881 39.130 9.28 0.00 0.00 4.01
6596 7411 9.688592 AATAAAGCTCTGAGAAAACAAATCTTG 57.311 29.630 9.28 0.00 0.00 3.02
6628 7443 8.570488 GGCTCCAAATTCAAAAGAAATCATTTT 58.430 29.630 0.00 0.00 0.00 1.82
6629 7444 7.940688 AGGCTCCAAATTCAAAAGAAATCATTT 59.059 29.630 0.00 0.00 0.00 2.32
6630 7445 7.389607 CAGGCTCCAAATTCAAAAGAAATCATT 59.610 33.333 0.00 0.00 0.00 2.57
6631 7446 6.877322 CAGGCTCCAAATTCAAAAGAAATCAT 59.123 34.615 0.00 0.00 0.00 2.45
6632 7447 6.183360 ACAGGCTCCAAATTCAAAAGAAATCA 60.183 34.615 0.00 0.00 0.00 2.57
6633 7448 6.226052 ACAGGCTCCAAATTCAAAAGAAATC 58.774 36.000 0.00 0.00 0.00 2.17
6634 7449 6.178607 ACAGGCTCCAAATTCAAAAGAAAT 57.821 33.333 0.00 0.00 0.00 2.17
6635 7450 5.612725 ACAGGCTCCAAATTCAAAAGAAA 57.387 34.783 0.00 0.00 0.00 2.52
6636 7451 5.612725 AACAGGCTCCAAATTCAAAAGAA 57.387 34.783 0.00 0.00 0.00 2.52
6637 7452 5.612725 AAACAGGCTCCAAATTCAAAAGA 57.387 34.783 0.00 0.00 0.00 2.52
6638 7453 6.760770 TGTAAAACAGGCTCCAAATTCAAAAG 59.239 34.615 0.00 0.00 0.00 2.27
6639 7454 6.536941 GTGTAAAACAGGCTCCAAATTCAAAA 59.463 34.615 0.00 0.00 0.00 2.44
6640 7455 6.045955 GTGTAAAACAGGCTCCAAATTCAAA 58.954 36.000 0.00 0.00 0.00 2.69
6641 7456 5.362430 AGTGTAAAACAGGCTCCAAATTCAA 59.638 36.000 0.00 0.00 0.00 2.69
6642 7457 4.892934 AGTGTAAAACAGGCTCCAAATTCA 59.107 37.500 0.00 0.00 0.00 2.57
6643 7458 5.453567 AGTGTAAAACAGGCTCCAAATTC 57.546 39.130 0.00 0.00 0.00 2.17
6644 7459 5.830991 TGTAGTGTAAAACAGGCTCCAAATT 59.169 36.000 0.00 0.00 0.00 1.82
6645 7460 5.381757 TGTAGTGTAAAACAGGCTCCAAAT 58.618 37.500 0.00 0.00 0.00 2.32
6646 7461 4.783055 TGTAGTGTAAAACAGGCTCCAAA 58.217 39.130 0.00 0.00 0.00 3.28
6647 7462 4.425180 TGTAGTGTAAAACAGGCTCCAA 57.575 40.909 0.00 0.00 0.00 3.53
6648 7463 4.131596 GTTGTAGTGTAAAACAGGCTCCA 58.868 43.478 0.00 0.00 0.00 3.86
6649 7464 3.501062 GGTTGTAGTGTAAAACAGGCTCC 59.499 47.826 0.00 0.00 0.00 4.70
6650 7465 4.131596 TGGTTGTAGTGTAAAACAGGCTC 58.868 43.478 0.00 0.00 0.00 4.70
6651 7466 4.159244 TGGTTGTAGTGTAAAACAGGCT 57.841 40.909 0.00 0.00 0.00 4.58
6652 7467 5.447624 AATGGTTGTAGTGTAAAACAGGC 57.552 39.130 0.00 0.00 0.00 4.85
6653 7468 6.915843 GTCAAATGGTTGTAGTGTAAAACAGG 59.084 38.462 0.00 0.00 36.07 4.00
6654 7469 7.476667 TGTCAAATGGTTGTAGTGTAAAACAG 58.523 34.615 0.00 0.00 36.07 3.16
6655 7470 7.392494 TGTCAAATGGTTGTAGTGTAAAACA 57.608 32.000 0.00 0.00 36.07 2.83
6656 7471 8.690680 TTTGTCAAATGGTTGTAGTGTAAAAC 57.309 30.769 0.00 0.00 36.07 2.43
6657 7472 9.307121 CATTTGTCAAATGGTTGTAGTGTAAAA 57.693 29.630 24.79 0.00 43.50 1.52
6658 7473 7.436673 GCATTTGTCAAATGGTTGTAGTGTAAA 59.563 33.333 30.31 0.00 46.47 2.01
6659 7474 6.920758 GCATTTGTCAAATGGTTGTAGTGTAA 59.079 34.615 30.31 0.00 46.47 2.41
6660 7475 6.039829 TGCATTTGTCAAATGGTTGTAGTGTA 59.960 34.615 30.31 8.05 46.47 2.90
6661 7476 5.163468 TGCATTTGTCAAATGGTTGTAGTGT 60.163 36.000 30.31 0.00 46.47 3.55
6662 7477 5.288015 TGCATTTGTCAAATGGTTGTAGTG 58.712 37.500 30.31 11.49 46.47 2.74
6663 7478 5.528043 TGCATTTGTCAAATGGTTGTAGT 57.472 34.783 30.31 0.00 46.47 2.73
6664 7479 7.424227 AAATGCATTTGTCAAATGGTTGTAG 57.576 32.000 30.31 11.35 46.47 2.74
6665 7480 8.893219 TTAAATGCATTTGTCAAATGGTTGTA 57.107 26.923 30.31 13.26 46.47 2.41
6666 7481 7.714377 TCTTAAATGCATTTGTCAAATGGTTGT 59.286 29.630 30.31 5.43 46.47 3.32
6667 7482 8.085720 TCTTAAATGCATTTGTCAAATGGTTG 57.914 30.769 30.31 14.23 46.47 3.77
6668 7483 8.851541 ATCTTAAATGCATTTGTCAAATGGTT 57.148 26.923 30.31 11.31 46.47 3.67
6669 7484 8.851541 AATCTTAAATGCATTTGTCAAATGGT 57.148 26.923 30.31 9.31 46.47 3.55
6670 7485 9.763465 GAAATCTTAAATGCATTTGTCAAATGG 57.237 29.630 30.31 16.94 46.47 3.16
6672 7487 9.504708 TGGAAATCTTAAATGCATTTGTCAAAT 57.495 25.926 30.43 14.91 0.00 2.32
6673 7488 8.772705 GTGGAAATCTTAAATGCATTTGTCAAA 58.227 29.630 30.43 17.45 0.00 2.69
6674 7489 7.387397 GGTGGAAATCTTAAATGCATTTGTCAA 59.613 33.333 30.43 17.77 0.00 3.18
6675 7490 6.873076 GGTGGAAATCTTAAATGCATTTGTCA 59.127 34.615 30.43 15.90 0.00 3.58
6676 7491 6.873076 TGGTGGAAATCTTAAATGCATTTGTC 59.127 34.615 30.43 17.58 0.00 3.18
6677 7492 6.767456 TGGTGGAAATCTTAAATGCATTTGT 58.233 32.000 30.43 11.59 0.00 2.83
6678 7493 7.670009 TTGGTGGAAATCTTAAATGCATTTG 57.330 32.000 30.43 17.17 0.00 2.32
6679 7494 8.688747 TTTTGGTGGAAATCTTAAATGCATTT 57.311 26.923 26.72 26.72 0.00 2.32
6680 7495 8.866970 ATTTTGGTGGAAATCTTAAATGCATT 57.133 26.923 5.99 5.99 0.00 3.56
6681 7496 8.866970 AATTTTGGTGGAAATCTTAAATGCAT 57.133 26.923 0.00 0.00 0.00 3.96
6682 7497 8.566260 CAAATTTTGGTGGAAATCTTAAATGCA 58.434 29.630 0.97 0.00 0.00 3.96
6683 7498 8.022550 CCAAATTTTGGTGGAAATCTTAAATGC 58.977 33.333 18.34 0.00 45.93 3.56
6700 7515 4.870123 TCACCTGACATCCCAAATTTTG 57.130 40.909 1.99 1.99 0.00 2.44
6701 7516 4.840115 ACATCACCTGACATCCCAAATTTT 59.160 37.500 0.00 0.00 0.00 1.82
6702 7517 4.419282 ACATCACCTGACATCCCAAATTT 58.581 39.130 0.00 0.00 0.00 1.82
6703 7518 4.051661 ACATCACCTGACATCCCAAATT 57.948 40.909 0.00 0.00 0.00 1.82
6704 7519 3.744940 ACATCACCTGACATCCCAAAT 57.255 42.857 0.00 0.00 0.00 2.32
6705 7520 3.524095 AACATCACCTGACATCCCAAA 57.476 42.857 0.00 0.00 0.00 3.28
6706 7521 3.524095 AAACATCACCTGACATCCCAA 57.476 42.857 0.00 0.00 0.00 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.