Multiple sequence alignment - TraesCS6D01G144800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G144800 chr6D 100.000 4230 0 0 1 4230 115317519 115313290 0.000000e+00 7812.0
1 TraesCS6D01G144800 chr6D 78.505 214 26 10 3595 3788 22141307 22141520 5.740000e-24 122.0
2 TraesCS6D01G144800 chr6A 95.496 3397 94 25 439 3788 143700688 143697304 0.000000e+00 5371.0
3 TraesCS6D01G144800 chr6A 93.617 94 6 0 1 94 143700822 143700729 1.590000e-29 141.0
4 TraesCS6D01G144800 chr6B 96.102 3181 83 20 631 3788 204604184 204601022 0.000000e+00 5149.0
5 TraesCS6D01G144800 chr6B 91.928 223 13 2 491 713 204605903 204605686 1.480000e-79 307.0
6 TraesCS6D01G144800 chr6B 81.269 331 33 12 331 634 204604591 204604263 1.520000e-59 241.0
7 TraesCS6D01G144800 chr6B 80.412 291 51 6 3788 4074 559514527 559514815 2.560000e-52 217.0
8 TraesCS6D01G144800 chr7D 82.704 318 51 2 2202 2517 587156779 587156464 3.220000e-71 279.0
9 TraesCS6D01G144800 chr7D 79.725 291 53 5 3788 4074 104746823 104746535 5.540000e-49 206.0
10 TraesCS6D01G144800 chr7D 78.777 278 52 6 2660 2935 223838556 223838828 3.360000e-41 180.0
11 TraesCS6D01G144800 chr7D 74.086 301 72 6 1414 1711 587160125 587159828 7.430000e-23 119.0
12 TraesCS6D01G144800 chr7B 82.704 318 51 2 2202 2517 658282799 658282484 3.220000e-71 279.0
13 TraesCS6D01G144800 chr7B 75.748 301 67 6 1414 1711 658292878 658292581 3.410000e-31 147.0
14 TraesCS6D01G144800 chr7B 96.429 56 1 1 3591 3646 579604771 579604825 1.620000e-14 91.6
15 TraesCS6D01G144800 chr7A 82.500 320 48 4 2202 2517 679054155 679053840 1.500000e-69 274.0
16 TraesCS6D01G144800 chr7A 78.417 278 53 6 2660 2935 234526110 234526382 1.560000e-39 174.0
17 TraesCS6D01G144800 chr7A 74.419 301 71 6 1414 1711 679060542 679060245 1.600000e-24 124.0
18 TraesCS6D01G144800 chr7A 87.234 94 8 4 3588 3679 571693269 571693360 2.080000e-18 104.0
19 TraesCS6D01G144800 chr7A 85.859 99 11 3 3586 3682 20690368 20690271 7.480000e-18 102.0
20 TraesCS6D01G144800 chr2B 80.756 291 48 8 3788 4073 75913091 75913378 1.980000e-53 220.0
21 TraesCS6D01G144800 chr2B 100.000 29 0 0 189 217 653793667 653793639 2.000000e-03 54.7
22 TraesCS6D01G144800 chr3A 80.412 291 51 6 3788 4074 41404125 41404413 2.560000e-52 217.0
23 TraesCS6D01G144800 chr3A 82.400 250 40 1 3788 4033 147811102 147810853 9.210000e-52 215.0
24 TraesCS6D01G144800 chr1A 80.412 291 50 7 3788 4074 111791891 111792178 9.210000e-52 215.0
25 TraesCS6D01G144800 chr3B 80.000 290 54 4 3788 4074 68446087 68446375 1.190000e-50 211.0
26 TraesCS6D01G144800 chr5A 79.725 291 52 7 3788 4074 146498667 146498380 1.990000e-48 204.0
27 TraesCS6D01G144800 chr5D 79.655 290 52 7 3788 4073 32229575 32229289 7.170000e-48 202.0
28 TraesCS6D01G144800 chrUn 92.308 65 4 1 3590 3653 8148582 8148518 1.620000e-14 91.6
29 TraesCS6D01G144800 chr5B 91.176 68 5 1 3589 3655 453717817 453717750 1.620000e-14 91.6
30 TraesCS6D01G144800 chr5B 85.915 71 7 3 353 421 447005441 447005372 5.870000e-09 73.1
31 TraesCS6D01G144800 chr2D 90.769 65 4 2 3590 3653 579945424 579945361 7.540000e-13 86.1
32 TraesCS6D01G144800 chr1D 86.667 75 7 3 3595 3667 438842116 438842043 3.510000e-11 80.5
33 TraesCS6D01G144800 chr2A 94.872 39 2 0 3731 3769 719332489 719332451 1.270000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G144800 chr6D 115313290 115317519 4229 True 7812 7812 100.000000 1 4230 1 chr6D.!!$R1 4229
1 TraesCS6D01G144800 chr6A 143697304 143700822 3518 True 2756 5371 94.556500 1 3788 2 chr6A.!!$R1 3787
2 TraesCS6D01G144800 chr6B 204601022 204605903 4881 True 1899 5149 89.766333 331 3788 3 chr6B.!!$R1 3457

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
654 1745 0.464013 GGATCGTCGTCTCCTCTCCA 60.464 60.0 8.70 0.00 0.00 3.86 F
1662 2767 0.889186 CCAACAACAACCTCTCCGGG 60.889 60.0 0.00 0.00 36.97 5.73 F
2130 3249 0.031716 TCTCCATCAGCCAGGCTACT 60.032 55.0 15.64 0.49 36.40 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2037 3156 2.257371 GTCACGCAGCCGTCAGTA 59.743 61.111 0.00 0.00 46.39 2.74 R
2827 3955 0.177836 TGTACGCCATCATCACCTGG 59.822 55.000 0.00 0.00 35.53 4.45 R
3886 5039 0.106868 TCTGCCATGGCCTTCATCTG 60.107 55.000 33.44 12.82 41.09 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 3.249973 GAACCGCCGCAACACCTTC 62.250 63.158 0.00 0.00 0.00 3.46
64 65 2.684843 GCAACCTCCAAGCTGCTCG 61.685 63.158 1.00 0.00 0.00 5.03
168 169 3.736224 TCGGGTAGTCGAGGCCCT 61.736 66.667 14.58 0.00 40.22 5.19
169 170 3.217743 CGGGTAGTCGAGGCCCTC 61.218 72.222 14.58 0.00 40.22 4.30
172 173 1.381463 GGTAGTCGAGGCCCTCCTT 60.381 63.158 4.85 0.00 44.46 3.36
173 174 1.393487 GGTAGTCGAGGCCCTCCTTC 61.393 65.000 4.85 0.00 44.46 3.46
174 175 1.076192 TAGTCGAGGCCCTCCTTCC 60.076 63.158 4.85 0.00 44.46 3.46
175 176 1.870941 TAGTCGAGGCCCTCCTTCCA 61.871 60.000 4.85 0.00 44.46 3.53
176 177 2.121832 TCGAGGCCCTCCTTCCAA 59.878 61.111 4.85 0.00 44.46 3.53
177 178 1.990060 TCGAGGCCCTCCTTCCAAG 60.990 63.158 4.85 0.00 44.46 3.61
179 180 1.911471 GAGGCCCTCCTTCCAAGAG 59.089 63.158 0.00 0.00 44.46 2.85
185 186 4.153957 TCCTTCCAAGAGGAGGCC 57.846 61.111 0.00 0.00 46.74 5.19
186 187 1.616628 TCCTTCCAAGAGGAGGCCC 60.617 63.158 0.00 0.00 46.74 5.80
187 188 2.684499 CCTTCCAAGAGGAGGCCCC 61.684 68.421 0.00 0.00 46.74 5.80
188 189 1.925455 CTTCCAAGAGGAGGCCCCA 60.925 63.158 12.24 0.00 46.74 4.96
189 190 1.919600 CTTCCAAGAGGAGGCCCCAG 61.920 65.000 12.24 0.51 46.74 4.45
191 192 1.695597 CCAAGAGGAGGCCCCAGAT 60.696 63.158 12.24 0.00 36.89 2.90
192 193 1.704007 CCAAGAGGAGGCCCCAGATC 61.704 65.000 12.24 0.00 36.89 2.75
193 194 1.385206 AAGAGGAGGCCCCAGATCC 60.385 63.158 12.24 6.46 37.41 3.36
194 195 2.851588 GAGGAGGCCCCAGATCCC 60.852 72.222 12.24 0.00 37.41 3.85
242 243 4.373116 GCGTCGCAGAACCCCTCA 62.373 66.667 13.44 0.00 39.69 3.86
243 244 2.125912 CGTCGCAGAACCCCTCAG 60.126 66.667 0.00 0.00 39.69 3.35
244 245 2.266055 GTCGCAGAACCCCTCAGG 59.734 66.667 0.00 0.00 39.69 3.86
245 246 3.706373 TCGCAGAACCCCTCAGGC 61.706 66.667 0.00 0.00 40.58 4.85
246 247 4.020617 CGCAGAACCCCTCAGGCA 62.021 66.667 0.00 0.00 40.58 4.75
247 248 2.045536 GCAGAACCCCTCAGGCAG 60.046 66.667 0.00 0.00 40.58 4.85
248 249 2.900106 GCAGAACCCCTCAGGCAGT 61.900 63.158 0.00 0.00 40.58 4.40
249 250 1.002868 CAGAACCCCTCAGGCAGTG 60.003 63.158 0.00 0.00 40.58 3.66
250 251 2.227036 AGAACCCCTCAGGCAGTGG 61.227 63.158 0.00 0.00 40.58 4.00
251 252 3.927481 GAACCCCTCAGGCAGTGGC 62.927 68.421 9.02 9.02 40.58 5.01
255 256 4.463879 CCTCAGGCAGTGGCGGAG 62.464 72.222 31.19 31.19 46.19 4.63
256 257 4.463879 CTCAGGCAGTGGCGGAGG 62.464 72.222 30.72 16.85 43.89 4.30
260 261 4.785453 GGCAGTGGCGGAGGGAAG 62.785 72.222 0.00 0.00 42.47 3.46
261 262 4.785453 GCAGTGGCGGAGGGAAGG 62.785 72.222 0.00 0.00 0.00 3.46
262 263 4.101448 CAGTGGCGGAGGGAAGGG 62.101 72.222 0.00 0.00 0.00 3.95
263 264 4.332543 AGTGGCGGAGGGAAGGGA 62.333 66.667 0.00 0.00 0.00 4.20
264 265 3.787001 GTGGCGGAGGGAAGGGAG 61.787 72.222 0.00 0.00 0.00 4.30
265 266 4.005978 TGGCGGAGGGAAGGGAGA 62.006 66.667 0.00 0.00 0.00 3.71
266 267 3.157949 GGCGGAGGGAAGGGAGAG 61.158 72.222 0.00 0.00 0.00 3.20
267 268 3.157949 GCGGAGGGAAGGGAGAGG 61.158 72.222 0.00 0.00 0.00 3.69
268 269 2.444895 CGGAGGGAAGGGAGAGGG 60.445 72.222 0.00 0.00 0.00 4.30
269 270 3.010226 CGGAGGGAAGGGAGAGGGA 62.010 68.421 0.00 0.00 0.00 4.20
271 272 0.692756 GGAGGGAAGGGAGAGGGAAG 60.693 65.000 0.00 0.00 0.00 3.46
272 273 0.692756 GAGGGAAGGGAGAGGGAAGG 60.693 65.000 0.00 0.00 0.00 3.46
273 274 1.694525 GGGAAGGGAGAGGGAAGGG 60.695 68.421 0.00 0.00 0.00 3.95
274 275 1.694525 GGAAGGGAGAGGGAAGGGG 60.695 68.421 0.00 0.00 0.00 4.79
278 279 0.550393 AGGGAGAGGGAAGGGGAAAC 60.550 60.000 0.00 0.00 0.00 2.78
280 281 1.078356 GAGAGGGAAGGGGAAACGC 60.078 63.158 0.00 0.00 45.13 4.84
302 303 4.374702 GCGGCGGCGCTATGATTG 62.375 66.667 43.74 9.81 0.00 2.67
303 304 4.374702 CGGCGGCGCTATGATTGC 62.375 66.667 32.30 11.23 0.00 3.56
305 306 4.030452 GCGGCGCTATGATTGCCC 62.030 66.667 26.86 0.00 46.12 5.36
310 311 2.676750 CGGCGCTATGATTGCCCTATTA 60.677 50.000 7.64 0.00 46.12 0.98
312 313 3.127030 GGCGCTATGATTGCCCTATTAAC 59.873 47.826 7.64 0.00 43.06 2.01
313 314 3.127030 GCGCTATGATTGCCCTATTAACC 59.873 47.826 0.00 0.00 0.00 2.85
314 315 4.323417 CGCTATGATTGCCCTATTAACCA 58.677 43.478 0.00 0.00 0.00 3.67
315 316 4.154195 CGCTATGATTGCCCTATTAACCAC 59.846 45.833 0.00 0.00 0.00 4.16
316 317 5.316987 GCTATGATTGCCCTATTAACCACT 58.683 41.667 0.00 0.00 0.00 4.00
317 318 6.472887 GCTATGATTGCCCTATTAACCACTA 58.527 40.000 0.00 0.00 0.00 2.74
320 321 9.167311 CTATGATTGCCCTATTAACCACTATTC 57.833 37.037 0.00 0.00 0.00 1.75
321 322 6.905736 TGATTGCCCTATTAACCACTATTCA 58.094 36.000 0.00 0.00 0.00 2.57
322 323 7.526041 TGATTGCCCTATTAACCACTATTCAT 58.474 34.615 0.00 0.00 0.00 2.57
323 324 7.448161 TGATTGCCCTATTAACCACTATTCATG 59.552 37.037 0.00 0.00 0.00 3.07
324 325 6.508030 TGCCCTATTAACCACTATTCATGA 57.492 37.500 0.00 0.00 0.00 3.07
325 326 6.905736 TGCCCTATTAACCACTATTCATGAA 58.094 36.000 11.26 11.26 0.00 2.57
327 328 6.431234 GCCCTATTAACCACTATTCATGAAGG 59.569 42.308 14.54 11.66 0.00 3.46
328 329 7.518188 CCCTATTAACCACTATTCATGAAGGT 58.482 38.462 14.54 12.31 0.00 3.50
329 330 7.445402 CCCTATTAACCACTATTCATGAAGGTG 59.555 40.741 25.11 25.11 0.00 4.00
331 332 7.630242 ATTAACCACTATTCATGAAGGTGTG 57.370 36.000 27.47 24.52 0.00 3.82
332 333 4.640771 ACCACTATTCATGAAGGTGTGT 57.359 40.909 27.47 23.42 0.00 3.72
333 334 5.755409 ACCACTATTCATGAAGGTGTGTA 57.245 39.130 27.47 11.67 0.00 2.90
334 335 6.313519 ACCACTATTCATGAAGGTGTGTAT 57.686 37.500 27.47 17.20 0.00 2.29
335 336 6.115446 ACCACTATTCATGAAGGTGTGTATG 58.885 40.000 27.47 19.60 0.00 2.39
336 337 5.008019 CCACTATTCATGAAGGTGTGTATGC 59.992 44.000 27.47 0.00 0.00 3.14
337 338 4.811024 ACTATTCATGAAGGTGTGTATGCG 59.189 41.667 14.54 0.00 0.00 4.73
338 339 2.022764 TCATGAAGGTGTGTATGCGG 57.977 50.000 0.00 0.00 0.00 5.69
339 340 1.277842 TCATGAAGGTGTGTATGCGGT 59.722 47.619 0.00 0.00 0.00 5.68
352 1334 2.045926 GCGGTTGGAGCAGATGGT 60.046 61.111 0.00 0.00 34.19 3.55
367 1349 2.374504 AGATGGTAGAGATGGCAATGGG 59.625 50.000 0.00 0.00 0.00 4.00
391 1374 3.673956 TATGGGCGGCACAACCTCG 62.674 63.158 9.89 0.00 35.61 4.63
404 1387 0.822121 AACCTCGTTCTGCCCAAACC 60.822 55.000 0.00 0.00 0.00 3.27
410 1393 1.182667 GTTCTGCCCAAACCCATACC 58.817 55.000 0.00 0.00 0.00 2.73
439 1422 2.398588 CTGGATAGAACCACCAGCCTA 58.601 52.381 0.00 0.00 43.32 3.93
451 1449 1.002087 ACCAGCCTAGTTTTGGTCTCG 59.998 52.381 4.67 0.00 41.19 4.04
462 1467 7.980099 CCTAGTTTTGGTCTCGTATGACTTTAT 59.020 37.037 0.00 0.00 37.16 1.40
464 1469 8.029642 AGTTTTGGTCTCGTATGACTTTATTG 57.970 34.615 0.00 0.00 37.16 1.90
466 1471 6.961359 TTGGTCTCGTATGACTTTATTGTG 57.039 37.500 0.00 0.00 37.16 3.33
471 1476 4.776349 TCGTATGACTTTATTGTGGCCAT 58.224 39.130 9.72 0.00 0.00 4.40
473 1478 4.024048 CGTATGACTTTATTGTGGCCATCC 60.024 45.833 9.72 0.00 0.00 3.51
513 1522 4.678287 CGGATGTCATTCATTATGCTTTGC 59.322 41.667 0.00 0.00 36.83 3.68
516 1525 6.365247 GGATGTCATTCATTATGCTTTGCATC 59.635 38.462 8.39 0.00 41.71 3.91
530 1539 4.726416 CTTTGCATCAGTTTGACGCTATT 58.274 39.130 0.00 0.00 36.42 1.73
598 1607 8.627208 AAGAGAAAGCTAATGTTTCATCTTCA 57.373 30.769 0.00 0.00 36.53 3.02
654 1745 0.464013 GGATCGTCGTCTCCTCTCCA 60.464 60.000 8.70 0.00 0.00 3.86
799 1903 1.305381 CCGACCACCTCCTTCCTCT 60.305 63.158 0.00 0.00 0.00 3.69
855 1960 2.365105 CCAGCCCGACCCCTTCTA 60.365 66.667 0.00 0.00 0.00 2.10
1519 2624 1.004918 CACCTCCACAGGAACGACC 60.005 63.158 0.00 0.00 43.65 4.79
1662 2767 0.889186 CCAACAACAACCTCTCCGGG 60.889 60.000 0.00 0.00 36.97 5.73
1799 2918 2.884663 TGTTTATTAACTGCGTGGCG 57.115 45.000 0.00 0.00 35.24 5.69
2067 3186 2.602676 CGTGACCCTCCCCAATGGT 61.603 63.158 0.00 0.00 34.77 3.55
2130 3249 0.031716 TCTCCATCAGCCAGGCTACT 60.032 55.000 15.64 0.49 36.40 2.57
2308 3430 2.505557 GGTCGTCGTACAAGGCGG 60.506 66.667 0.00 0.00 0.00 6.13
2564 3686 3.139077 TCTGCAGCATCATCATCATCAC 58.861 45.455 9.47 0.00 0.00 3.06
2717 3845 1.153489 GAAGAGCTGCCGATGCTGA 60.153 57.895 0.00 0.00 41.30 4.26
3085 4213 0.831966 AGGAGGAGATGCTCAAGCTG 59.168 55.000 3.32 0.00 42.66 4.24
3331 4459 2.849007 CGATCGATCGCATGCACC 59.151 61.111 32.34 4.68 43.84 5.01
3553 4683 1.740296 GGATGCGGCGTAGTGTGTT 60.740 57.895 9.37 0.00 0.00 3.32
3583 4713 6.042143 AGTACATTGGTTCTTGCTTGTTTTG 58.958 36.000 0.00 0.00 0.00 2.44
3591 4721 3.871485 TCTTGCTTGTTTTGCCATGTTT 58.129 36.364 0.00 0.00 0.00 2.83
3593 4723 5.423015 TCTTGCTTGTTTTGCCATGTTTTA 58.577 33.333 0.00 0.00 0.00 1.52
3679 4813 2.158957 AGAGGAACATCACACAACACGT 60.159 45.455 0.00 0.00 0.00 4.49
3683 4817 3.496884 GGAACATCACACAACACGTACAT 59.503 43.478 0.00 0.00 0.00 2.29
3684 4818 4.454231 GAACATCACACAACACGTACATG 58.546 43.478 0.00 0.00 0.00 3.21
3685 4819 2.805671 ACATCACACAACACGTACATGG 59.194 45.455 0.00 0.00 0.00 3.66
3686 4820 1.222300 TCACACAACACGTACATGGC 58.778 50.000 0.00 0.00 0.00 4.40
3687 4821 0.940833 CACACAACACGTACATGGCA 59.059 50.000 0.00 0.00 0.00 4.92
3688 4822 1.535028 CACACAACACGTACATGGCAT 59.465 47.619 0.00 0.00 0.00 4.40
3689 4823 1.804151 ACACAACACGTACATGGCATC 59.196 47.619 0.00 0.00 0.00 3.91
3690 4824 1.803555 CACAACACGTACATGGCATCA 59.196 47.619 0.00 0.00 0.00 3.07
3708 4858 5.061853 GCATCAGAAGCAAAGAGATATGGA 58.938 41.667 0.00 0.00 0.00 3.41
3717 4867 4.384056 CAAAGAGATATGGAATGCTCCGT 58.616 43.478 0.00 0.00 45.85 4.69
3721 4871 6.174720 AGAGATATGGAATGCTCCGTTAAA 57.825 37.500 0.00 0.00 45.85 1.52
3776 4929 4.450419 CGAACAAGAGAAGCAGATCAAACT 59.550 41.667 0.00 0.00 0.00 2.66
3782 4935 7.041508 ACAAGAGAAGCAGATCAAACTAACAAG 60.042 37.037 0.00 0.00 0.00 3.16
3788 4941 4.447724 GCAGATCAAACTAACAAGACGTCA 59.552 41.667 19.50 0.00 0.00 4.35
3789 4942 5.050363 GCAGATCAAACTAACAAGACGTCAA 60.050 40.000 19.50 0.00 0.00 3.18
3790 4943 6.584954 CAGATCAAACTAACAAGACGTCAAG 58.415 40.000 19.50 11.96 0.00 3.02
3791 4944 6.420903 CAGATCAAACTAACAAGACGTCAAGA 59.579 38.462 19.50 0.65 0.00 3.02
3792 4945 7.116948 CAGATCAAACTAACAAGACGTCAAGAT 59.883 37.037 19.50 6.79 0.00 2.40
3793 4946 8.304596 AGATCAAACTAACAAGACGTCAAGATA 58.695 33.333 19.50 7.61 0.00 1.98
3794 4947 7.869016 TCAAACTAACAAGACGTCAAGATAG 57.131 36.000 19.50 18.01 0.00 2.08
3795 4948 6.365247 TCAAACTAACAAGACGTCAAGATAGC 59.635 38.462 19.50 0.00 0.00 2.97
3796 4949 5.386958 ACTAACAAGACGTCAAGATAGCA 57.613 39.130 19.50 0.00 0.00 3.49
3797 4950 5.162075 ACTAACAAGACGTCAAGATAGCAC 58.838 41.667 19.50 0.00 0.00 4.40
3798 4951 2.960819 ACAAGACGTCAAGATAGCACC 58.039 47.619 19.50 0.00 0.00 5.01
3799 4952 2.563179 ACAAGACGTCAAGATAGCACCT 59.437 45.455 19.50 0.00 0.00 4.00
3800 4953 3.006967 ACAAGACGTCAAGATAGCACCTT 59.993 43.478 19.50 0.00 0.00 3.50
3801 4954 3.512033 AGACGTCAAGATAGCACCTTC 57.488 47.619 19.50 0.00 0.00 3.46
3802 4955 2.826128 AGACGTCAAGATAGCACCTTCA 59.174 45.455 19.50 0.00 0.00 3.02
3803 4956 3.258372 AGACGTCAAGATAGCACCTTCAA 59.742 43.478 19.50 0.00 0.00 2.69
3804 4957 3.589988 ACGTCAAGATAGCACCTTCAAG 58.410 45.455 0.00 0.00 0.00 3.02
3805 4958 3.258372 ACGTCAAGATAGCACCTTCAAGA 59.742 43.478 0.00 0.00 0.00 3.02
3806 4959 4.245660 CGTCAAGATAGCACCTTCAAGAA 58.754 43.478 0.00 0.00 0.00 2.52
3807 4960 4.328440 CGTCAAGATAGCACCTTCAAGAAG 59.672 45.833 2.83 2.83 38.14 2.85
3817 4970 2.863658 CTTCAAGAAGGAAAGCGACG 57.136 50.000 1.86 0.00 34.87 5.12
3818 4971 0.865769 TTCAAGAAGGAAAGCGACGC 59.134 50.000 13.03 13.03 0.00 5.19
3819 4972 0.949105 TCAAGAAGGAAAGCGACGCC 60.949 55.000 17.79 0.35 0.00 5.68
3820 4973 1.070786 AAGAAGGAAAGCGACGCCA 59.929 52.632 17.79 0.00 0.00 5.69
3821 4974 0.321653 AAGAAGGAAAGCGACGCCAT 60.322 50.000 17.79 5.28 0.00 4.40
3822 4975 1.021390 AGAAGGAAAGCGACGCCATG 61.021 55.000 17.79 0.00 0.00 3.66
3823 4976 1.003839 AAGGAAAGCGACGCCATGA 60.004 52.632 17.79 0.00 0.00 3.07
3824 4977 1.298859 AAGGAAAGCGACGCCATGAC 61.299 55.000 17.79 3.55 0.00 3.06
3825 4978 2.395690 GAAAGCGACGCCATGACG 59.604 61.111 17.79 0.00 38.79 4.35
3858 5011 3.192799 TCCGGAGAACTGGAGCTAG 57.807 57.895 0.00 0.00 45.56 3.42
3859 5012 0.395862 TCCGGAGAACTGGAGCTAGG 60.396 60.000 0.00 0.00 45.56 3.02
3860 5013 1.395826 CCGGAGAACTGGAGCTAGGG 61.396 65.000 0.00 0.00 44.87 3.53
3861 5014 0.684805 CGGAGAACTGGAGCTAGGGT 60.685 60.000 0.00 0.00 0.00 4.34
3862 5015 1.574263 GGAGAACTGGAGCTAGGGTT 58.426 55.000 0.00 0.00 0.00 4.11
3863 5016 1.909986 GGAGAACTGGAGCTAGGGTTT 59.090 52.381 0.00 0.00 0.00 3.27
3864 5017 2.093394 GGAGAACTGGAGCTAGGGTTTC 60.093 54.545 0.00 0.00 0.00 2.78
3865 5018 1.909986 AGAACTGGAGCTAGGGTTTCC 59.090 52.381 0.00 0.00 0.00 3.13
3866 5019 0.992695 AACTGGAGCTAGGGTTTCCC 59.007 55.000 0.00 0.00 45.90 3.97
3876 5029 3.388841 GGTTTCCCCTGAGCTCGA 58.611 61.111 9.64 0.00 0.00 4.04
3877 5030 1.677552 GGTTTCCCCTGAGCTCGAA 59.322 57.895 9.64 3.37 0.00 3.71
3878 5031 0.391793 GGTTTCCCCTGAGCTCGAAG 60.392 60.000 9.64 1.24 0.00 3.79
3879 5032 0.608640 GTTTCCCCTGAGCTCGAAGA 59.391 55.000 9.64 0.11 0.00 2.87
3890 5043 2.759973 TCGAAGAGGGGCGCAGAT 60.760 61.111 10.83 0.00 0.00 2.90
3891 5044 2.587194 CGAAGAGGGGCGCAGATG 60.587 66.667 10.83 0.00 0.00 2.90
3892 5045 2.903357 GAAGAGGGGCGCAGATGA 59.097 61.111 10.83 0.00 0.00 2.92
3893 5046 1.221840 GAAGAGGGGCGCAGATGAA 59.778 57.895 10.83 0.00 0.00 2.57
3894 5047 0.813210 GAAGAGGGGCGCAGATGAAG 60.813 60.000 10.83 0.00 0.00 3.02
3895 5048 2.203126 GAGGGGCGCAGATGAAGG 60.203 66.667 10.83 0.00 0.00 3.46
3896 5049 4.496336 AGGGGCGCAGATGAAGGC 62.496 66.667 10.83 0.00 0.00 4.35
3899 5052 2.517875 GGCGCAGATGAAGGCCAT 60.518 61.111 10.83 0.00 44.91 4.40
3900 5053 2.719979 GCGCAGATGAAGGCCATG 59.280 61.111 5.01 0.00 35.17 3.66
3901 5054 2.842256 GCGCAGATGAAGGCCATGG 61.842 63.158 7.63 7.63 35.17 3.66
3902 5055 2.842256 CGCAGATGAAGGCCATGGC 61.842 63.158 29.47 29.47 35.17 4.40
3903 5056 1.755395 GCAGATGAAGGCCATGGCA 60.755 57.895 36.56 18.14 44.11 4.92
3904 5057 1.735376 GCAGATGAAGGCCATGGCAG 61.735 60.000 36.56 16.16 44.11 4.85
3905 5058 0.106868 CAGATGAAGGCCATGGCAGA 60.107 55.000 36.56 17.82 44.11 4.26
3906 5059 0.183014 AGATGAAGGCCATGGCAGAG 59.817 55.000 36.56 0.00 44.11 3.35
3907 5060 1.453762 GATGAAGGCCATGGCAGAGC 61.454 60.000 36.56 22.25 44.11 4.09
3918 5071 3.346426 GGCAGAGCCTCCAAGAAAA 57.654 52.632 0.00 0.00 46.69 2.29
3919 5072 1.620822 GGCAGAGCCTCCAAGAAAAA 58.379 50.000 0.00 0.00 46.69 1.94
3920 5073 1.270826 GGCAGAGCCTCCAAGAAAAAC 59.729 52.381 0.00 0.00 46.69 2.43
3921 5074 1.068954 GCAGAGCCTCCAAGAAAAACG 60.069 52.381 0.00 0.00 0.00 3.60
3922 5075 2.494059 CAGAGCCTCCAAGAAAAACGA 58.506 47.619 0.00 0.00 0.00 3.85
3923 5076 2.224314 CAGAGCCTCCAAGAAAAACGAC 59.776 50.000 0.00 0.00 0.00 4.34
3924 5077 2.158813 AGAGCCTCCAAGAAAAACGACA 60.159 45.455 0.00 0.00 0.00 4.35
3925 5078 1.947456 AGCCTCCAAGAAAAACGACAC 59.053 47.619 0.00 0.00 0.00 3.67
3926 5079 1.001706 GCCTCCAAGAAAAACGACACC 60.002 52.381 0.00 0.00 0.00 4.16
3927 5080 1.607148 CCTCCAAGAAAAACGACACCC 59.393 52.381 0.00 0.00 0.00 4.61
3928 5081 1.263217 CTCCAAGAAAAACGACACCCG 59.737 52.381 0.00 0.00 45.44 5.28
3929 5082 0.317519 CCAAGAAAAACGACACCCGC 60.318 55.000 0.00 0.00 43.32 6.13
3930 5083 0.656205 CAAGAAAAACGACACCCGCG 60.656 55.000 0.00 0.00 43.32 6.46
3931 5084 0.810823 AAGAAAAACGACACCCGCGA 60.811 50.000 8.23 0.00 43.32 5.87
3932 5085 1.203313 GAAAAACGACACCCGCGAG 59.797 57.895 8.23 0.00 43.32 5.03
3933 5086 2.759519 GAAAAACGACACCCGCGAGC 62.760 60.000 8.23 0.00 43.32 5.03
3946 5099 4.476410 CGAGCGTCGCCACTGCTA 62.476 66.667 14.86 0.00 39.49 3.49
3947 5100 2.580867 GAGCGTCGCCACTGCTAG 60.581 66.667 14.86 0.00 39.49 3.42
3948 5101 4.803426 AGCGTCGCCACTGCTAGC 62.803 66.667 14.86 8.10 37.15 3.42
3950 5103 3.181967 CGTCGCCACTGCTAGCAC 61.182 66.667 14.93 2.78 34.43 4.40
3951 5104 2.815647 GTCGCCACTGCTAGCACC 60.816 66.667 14.93 1.60 34.43 5.01
3952 5105 3.310307 TCGCCACTGCTAGCACCA 61.310 61.111 14.93 0.00 34.43 4.17
3953 5106 2.816958 CGCCACTGCTAGCACCAG 60.817 66.667 14.93 7.15 36.41 4.00
3954 5107 3.130160 GCCACTGCTAGCACCAGC 61.130 66.667 14.93 12.64 42.15 4.85
3960 5113 3.503363 GCTAGCACCAGCAAGCCG 61.503 66.667 10.63 0.00 45.49 5.52
3961 5114 2.265739 CTAGCACCAGCAAGCCGA 59.734 61.111 0.00 0.00 45.49 5.54
3962 5115 1.812922 CTAGCACCAGCAAGCCGAG 60.813 63.158 0.00 0.00 45.49 4.63
3963 5116 3.958147 TAGCACCAGCAAGCCGAGC 62.958 63.158 0.00 0.00 45.49 5.03
3965 5118 2.979676 CACCAGCAAGCCGAGCAA 60.980 61.111 0.00 0.00 0.00 3.91
3966 5119 2.203337 ACCAGCAAGCCGAGCAAA 60.203 55.556 0.00 0.00 0.00 3.68
3967 5120 2.263741 ACCAGCAAGCCGAGCAAAG 61.264 57.895 0.00 0.00 0.00 2.77
3968 5121 1.968017 CCAGCAAGCCGAGCAAAGA 60.968 57.895 0.00 0.00 0.00 2.52
3969 5122 1.310933 CCAGCAAGCCGAGCAAAGAT 61.311 55.000 0.00 0.00 0.00 2.40
3970 5123 0.524862 CAGCAAGCCGAGCAAAGATT 59.475 50.000 0.00 0.00 0.00 2.40
3971 5124 1.068055 CAGCAAGCCGAGCAAAGATTT 60.068 47.619 0.00 0.00 0.00 2.17
3972 5125 1.200948 AGCAAGCCGAGCAAAGATTTC 59.799 47.619 0.00 0.00 0.00 2.17
3973 5126 1.200948 GCAAGCCGAGCAAAGATTTCT 59.799 47.619 0.00 0.00 0.00 2.52
3974 5127 2.730402 GCAAGCCGAGCAAAGATTTCTC 60.730 50.000 0.00 0.00 0.00 2.87
3975 5128 1.743996 AGCCGAGCAAAGATTTCTCC 58.256 50.000 0.00 0.00 0.00 3.71
3976 5129 0.735471 GCCGAGCAAAGATTTCTCCC 59.265 55.000 0.00 0.00 0.00 4.30
3977 5130 1.680249 GCCGAGCAAAGATTTCTCCCT 60.680 52.381 0.00 0.00 0.00 4.20
3978 5131 2.012673 CCGAGCAAAGATTTCTCCCTG 58.987 52.381 0.00 0.00 0.00 4.45
3979 5132 2.012673 CGAGCAAAGATTTCTCCCTGG 58.987 52.381 0.00 0.00 0.00 4.45
3980 5133 2.616510 CGAGCAAAGATTTCTCCCTGGT 60.617 50.000 0.00 0.00 0.00 4.00
3981 5134 3.013219 GAGCAAAGATTTCTCCCTGGTC 58.987 50.000 0.00 0.00 0.00 4.02
3982 5135 2.646798 AGCAAAGATTTCTCCCTGGTCT 59.353 45.455 0.00 0.00 0.00 3.85
3983 5136 2.751806 GCAAAGATTTCTCCCTGGTCTG 59.248 50.000 0.00 0.00 0.00 3.51
3984 5137 3.560025 GCAAAGATTTCTCCCTGGTCTGA 60.560 47.826 0.00 0.00 0.00 3.27
3985 5138 4.853007 CAAAGATTTCTCCCTGGTCTGAT 58.147 43.478 0.00 0.00 0.00 2.90
3986 5139 5.630069 GCAAAGATTTCTCCCTGGTCTGATA 60.630 44.000 0.00 0.00 0.00 2.15
3987 5140 5.622346 AAGATTTCTCCCTGGTCTGATAC 57.378 43.478 0.00 0.00 0.00 2.24
3988 5141 4.889780 AGATTTCTCCCTGGTCTGATACT 58.110 43.478 0.00 0.00 0.00 2.12
3989 5142 4.653341 AGATTTCTCCCTGGTCTGATACTG 59.347 45.833 0.00 0.00 0.00 2.74
3990 5143 3.757947 TTCTCCCTGGTCTGATACTGA 57.242 47.619 0.00 0.00 0.00 3.41
3991 5144 3.304911 TCTCCCTGGTCTGATACTGAG 57.695 52.381 0.00 0.00 0.00 3.35
3992 5145 1.686052 CTCCCTGGTCTGATACTGAGC 59.314 57.143 0.00 0.00 0.00 4.26
3993 5146 1.289231 TCCCTGGTCTGATACTGAGCT 59.711 52.381 0.00 0.00 32.50 4.09
3994 5147 2.514160 TCCCTGGTCTGATACTGAGCTA 59.486 50.000 0.00 0.00 32.50 3.32
3995 5148 3.141083 TCCCTGGTCTGATACTGAGCTAT 59.859 47.826 0.00 0.00 32.50 2.97
3996 5149 3.509575 CCCTGGTCTGATACTGAGCTATC 59.490 52.174 0.00 0.00 32.50 2.08
3997 5150 3.509575 CCTGGTCTGATACTGAGCTATCC 59.490 52.174 0.00 0.00 32.50 2.59
3998 5151 3.501349 TGGTCTGATACTGAGCTATCCC 58.499 50.000 0.00 0.00 32.50 3.85
3999 5152 3.117131 TGGTCTGATACTGAGCTATCCCA 60.117 47.826 0.00 0.00 32.50 4.37
4000 5153 3.898123 GGTCTGATACTGAGCTATCCCAA 59.102 47.826 0.00 0.00 0.00 4.12
4001 5154 4.345257 GGTCTGATACTGAGCTATCCCAAA 59.655 45.833 0.00 0.00 0.00 3.28
4002 5155 5.510520 GGTCTGATACTGAGCTATCCCAAAG 60.511 48.000 0.00 0.00 0.00 2.77
4003 5156 4.039730 TCTGATACTGAGCTATCCCAAAGC 59.960 45.833 0.00 0.00 40.40 3.51
4004 5157 3.071602 TGATACTGAGCTATCCCAAAGCC 59.928 47.826 0.00 0.00 41.02 4.35
4005 5158 0.179000 ACTGAGCTATCCCAAAGCCG 59.821 55.000 0.00 0.00 41.02 5.52
4006 5159 1.153168 TGAGCTATCCCAAAGCCGC 60.153 57.895 0.00 0.00 41.02 6.53
4007 5160 1.894282 GAGCTATCCCAAAGCCGCC 60.894 63.158 0.00 0.00 41.02 6.13
4008 5161 3.279875 GCTATCCCAAAGCCGCCG 61.280 66.667 0.00 0.00 33.73 6.46
4009 5162 2.591715 CTATCCCAAAGCCGCCGG 60.592 66.667 0.00 0.00 0.00 6.13
4010 5163 3.084646 TATCCCAAAGCCGCCGGA 61.085 61.111 7.68 0.00 0.00 5.14
4011 5164 2.397413 CTATCCCAAAGCCGCCGGAT 62.397 60.000 7.68 0.00 38.64 4.18
4012 5165 2.391724 TATCCCAAAGCCGCCGGATC 62.392 60.000 7.68 0.00 36.51 3.36
4015 5168 4.830765 CAAAGCCGCCGGATCCGA 62.831 66.667 35.42 0.00 42.83 4.55
4016 5169 4.090588 AAAGCCGCCGGATCCGAA 62.091 61.111 35.42 0.00 42.83 4.30
4017 5170 3.615509 AAAGCCGCCGGATCCGAAA 62.616 57.895 35.42 0.00 42.83 3.46
4018 5171 2.886730 AAAGCCGCCGGATCCGAAAT 62.887 55.000 35.42 13.14 42.83 2.17
4019 5172 3.346606 GCCGCCGGATCCGAAATC 61.347 66.667 35.42 18.55 42.83 2.17
4020 5173 2.421739 CCGCCGGATCCGAAATCT 59.578 61.111 35.42 0.00 42.83 2.40
4021 5174 1.956170 CCGCCGGATCCGAAATCTG 60.956 63.158 35.42 18.02 42.83 2.90
4022 5175 1.227263 CGCCGGATCCGAAATCTGT 60.227 57.895 35.42 0.00 42.83 3.41
4023 5176 1.490693 CGCCGGATCCGAAATCTGTG 61.491 60.000 35.42 19.16 42.83 3.66
4024 5177 0.179084 GCCGGATCCGAAATCTGTGA 60.179 55.000 35.42 0.00 42.83 3.58
4025 5178 1.541233 GCCGGATCCGAAATCTGTGAT 60.541 52.381 35.42 0.00 42.83 3.06
4026 5179 2.138320 CCGGATCCGAAATCTGTGATG 58.862 52.381 35.42 9.96 42.83 3.07
4027 5180 2.138320 CGGATCCGAAATCTGTGATGG 58.862 52.381 30.62 0.00 42.83 3.51
4028 5181 2.498167 GGATCCGAAATCTGTGATGGG 58.502 52.381 0.00 0.00 0.00 4.00
4029 5182 2.498167 GATCCGAAATCTGTGATGGGG 58.502 52.381 0.00 0.00 0.00 4.96
4030 5183 1.578897 TCCGAAATCTGTGATGGGGA 58.421 50.000 0.00 0.00 0.00 4.81
4031 5184 1.912731 TCCGAAATCTGTGATGGGGAA 59.087 47.619 0.00 0.00 0.00 3.97
4032 5185 2.092968 TCCGAAATCTGTGATGGGGAAG 60.093 50.000 0.00 0.00 0.00 3.46
4033 5186 1.672881 CGAAATCTGTGATGGGGAAGC 59.327 52.381 0.00 0.00 0.00 3.86
4034 5187 2.027385 GAAATCTGTGATGGGGAAGCC 58.973 52.381 0.00 0.00 0.00 4.35
4035 5188 0.107017 AATCTGTGATGGGGAAGCCG 60.107 55.000 0.00 0.00 0.00 5.52
4036 5189 2.615227 ATCTGTGATGGGGAAGCCGC 62.615 60.000 0.00 0.00 36.97 6.53
4042 5195 4.659172 TGGGGAAGCCGCAGTTGG 62.659 66.667 0.00 0.00 41.55 3.77
4051 5204 3.726517 CGCAGTTGGCCGGAGTTG 61.727 66.667 5.05 0.00 40.31 3.16
4052 5205 4.043200 GCAGTTGGCCGGAGTTGC 62.043 66.667 5.05 3.05 36.11 4.17
4059 5212 2.032681 GCCGGAGTTGCCAAGTCT 59.967 61.111 5.05 0.00 35.94 3.24
4060 5213 2.328099 GCCGGAGTTGCCAAGTCTG 61.328 63.158 5.05 13.22 37.04 3.51
4061 5214 1.071471 CCGGAGTTGCCAAGTCTGT 59.929 57.895 17.63 0.00 35.80 3.41
4062 5215 0.535102 CCGGAGTTGCCAAGTCTGTT 60.535 55.000 17.63 0.00 35.80 3.16
4063 5216 0.588252 CGGAGTTGCCAAGTCTGTTG 59.412 55.000 12.16 0.00 35.94 3.33
4064 5217 0.954452 GGAGTTGCCAAGTCTGTTGG 59.046 55.000 11.83 0.00 42.37 3.77
4065 5218 1.476833 GGAGTTGCCAAGTCTGTTGGA 60.477 52.381 11.83 0.00 42.06 3.53
4066 5219 1.876156 GAGTTGCCAAGTCTGTTGGAG 59.124 52.381 7.99 0.00 42.06 3.86
4067 5220 0.954452 GTTGCCAAGTCTGTTGGAGG 59.046 55.000 7.99 0.00 42.06 4.30
4068 5221 0.178992 TTGCCAAGTCTGTTGGAGGG 60.179 55.000 7.99 0.00 42.06 4.30
4069 5222 1.352622 TGCCAAGTCTGTTGGAGGGT 61.353 55.000 7.99 0.00 42.06 4.34
4070 5223 0.178990 GCCAAGTCTGTTGGAGGGTT 60.179 55.000 7.99 0.00 42.06 4.11
4071 5224 1.609208 CCAAGTCTGTTGGAGGGTTG 58.391 55.000 0.00 0.00 42.06 3.77
4072 5225 1.609208 CAAGTCTGTTGGAGGGTTGG 58.391 55.000 0.00 0.00 0.00 3.77
4073 5226 0.178990 AAGTCTGTTGGAGGGTTGGC 60.179 55.000 0.00 0.00 0.00 4.52
4074 5227 1.603739 GTCTGTTGGAGGGTTGGCC 60.604 63.158 0.00 0.00 0.00 5.36
4075 5228 2.672996 CTGTTGGAGGGTTGGCCG 60.673 66.667 0.00 0.00 34.97 6.13
4076 5229 4.966787 TGTTGGAGGGTTGGCCGC 62.967 66.667 0.00 0.00 34.97 6.53
4077 5230 4.660938 GTTGGAGGGTTGGCCGCT 62.661 66.667 0.00 0.00 39.42 5.52
4078 5231 4.659172 TTGGAGGGTTGGCCGCTG 62.659 66.667 0.00 0.00 36.29 5.18
4081 5234 4.344865 GAGGGTTGGCCGCTGGAA 62.345 66.667 0.00 0.00 36.29 3.53
4082 5235 4.351054 AGGGTTGGCCGCTGGAAG 62.351 66.667 0.00 0.00 34.56 3.46
4084 5237 4.660938 GGTTGGCCGCTGGAAGGT 62.661 66.667 0.00 0.00 0.00 3.50
4085 5238 3.365265 GTTGGCCGCTGGAAGGTG 61.365 66.667 0.00 0.00 0.00 4.00
4086 5239 4.659172 TTGGCCGCTGGAAGGTGG 62.659 66.667 0.00 0.00 39.64 4.61
4108 5261 4.595538 TGGCGACACCGGACACAC 62.596 66.667 9.46 0.00 43.94 3.82
4110 5263 4.634133 GCGACACCGGACACACGA 62.634 66.667 9.46 0.00 35.47 4.35
4111 5264 2.728383 CGACACCGGACACACGAC 60.728 66.667 9.46 0.00 35.47 4.34
4112 5265 2.414179 GACACCGGACACACGACA 59.586 61.111 9.46 0.00 35.47 4.35
4113 5266 1.006571 GACACCGGACACACGACAT 60.007 57.895 9.46 0.00 35.47 3.06
4114 5267 0.241749 GACACCGGACACACGACATA 59.758 55.000 9.46 0.00 35.47 2.29
4115 5268 0.242825 ACACCGGACACACGACATAG 59.757 55.000 9.46 0.00 35.47 2.23
4116 5269 0.457853 CACCGGACACACGACATAGG 60.458 60.000 9.46 0.00 35.47 2.57
4117 5270 0.609957 ACCGGACACACGACATAGGA 60.610 55.000 9.46 0.00 35.47 2.94
4118 5271 0.744874 CCGGACACACGACATAGGAT 59.255 55.000 0.00 0.00 35.47 3.24
4119 5272 1.269102 CCGGACACACGACATAGGATC 60.269 57.143 0.00 0.00 35.47 3.36
4120 5273 1.676529 CGGACACACGACATAGGATCT 59.323 52.381 0.00 0.00 35.47 2.75
4121 5274 2.876550 CGGACACACGACATAGGATCTA 59.123 50.000 0.00 0.00 35.47 1.98
4122 5275 3.058846 CGGACACACGACATAGGATCTAG 60.059 52.174 0.00 0.00 35.47 2.43
4123 5276 3.304794 GGACACACGACATAGGATCTAGC 60.305 52.174 0.00 0.00 0.00 3.42
4124 5277 3.288092 ACACACGACATAGGATCTAGCA 58.712 45.455 0.00 0.00 0.00 3.49
4125 5278 3.066900 ACACACGACATAGGATCTAGCAC 59.933 47.826 0.00 0.00 0.00 4.40
4126 5279 2.623889 ACACGACATAGGATCTAGCACC 59.376 50.000 0.00 0.00 0.00 5.01
4127 5280 2.623416 CACGACATAGGATCTAGCACCA 59.377 50.000 0.00 0.00 0.00 4.17
4128 5281 2.887783 ACGACATAGGATCTAGCACCAG 59.112 50.000 0.00 1.21 0.00 4.00
4129 5282 2.230025 CGACATAGGATCTAGCACCAGG 59.770 54.545 7.55 0.00 0.00 4.45
4130 5283 1.974236 ACATAGGATCTAGCACCAGGC 59.026 52.381 7.55 0.00 45.30 4.85
4141 5294 2.839098 ACCAGGCAAGGTGTGGAG 59.161 61.111 0.47 0.00 41.30 3.86
4142 5295 2.034687 CCAGGCAAGGTGTGGAGG 59.965 66.667 0.00 0.00 32.60 4.30
4143 5296 2.674380 CAGGCAAGGTGTGGAGGC 60.674 66.667 0.00 0.00 0.00 4.70
4144 5297 3.177884 AGGCAAGGTGTGGAGGCA 61.178 61.111 0.00 0.00 0.00 4.75
4145 5298 2.036256 GGCAAGGTGTGGAGGCAT 59.964 61.111 0.00 0.00 0.00 4.40
4146 5299 1.207488 AGGCAAGGTGTGGAGGCATA 61.207 55.000 0.00 0.00 0.00 3.14
4147 5300 1.032114 GGCAAGGTGTGGAGGCATAC 61.032 60.000 0.00 0.00 0.00 2.39
4148 5301 1.369091 GCAAGGTGTGGAGGCATACG 61.369 60.000 0.00 0.00 0.00 3.06
4149 5302 0.249120 CAAGGTGTGGAGGCATACGA 59.751 55.000 0.00 0.00 0.00 3.43
4150 5303 0.537188 AAGGTGTGGAGGCATACGAG 59.463 55.000 0.00 0.00 0.00 4.18
4151 5304 1.144057 GGTGTGGAGGCATACGAGG 59.856 63.158 0.00 0.00 0.00 4.63
4152 5305 1.144057 GTGTGGAGGCATACGAGGG 59.856 63.158 0.00 0.00 0.00 4.30
4153 5306 1.305802 TGTGGAGGCATACGAGGGT 60.306 57.895 0.00 0.00 0.00 4.34
4154 5307 1.327690 TGTGGAGGCATACGAGGGTC 61.328 60.000 0.00 0.00 0.00 4.46
4155 5308 2.125326 TGGAGGCATACGAGGGTCG 61.125 63.158 0.00 0.00 46.93 4.79
4156 5309 2.728817 GAGGCATACGAGGGTCGG 59.271 66.667 0.86 0.00 45.59 4.79
4157 5310 2.838225 AGGCATACGAGGGTCGGG 60.838 66.667 0.86 0.00 45.59 5.14
4158 5311 3.925090 GGCATACGAGGGTCGGGG 61.925 72.222 0.86 0.00 45.59 5.73
4159 5312 3.152400 GCATACGAGGGTCGGGGT 61.152 66.667 0.86 0.00 45.59 4.95
4160 5313 2.812499 CATACGAGGGTCGGGGTG 59.188 66.667 0.86 0.00 45.59 4.61
4161 5314 2.056223 CATACGAGGGTCGGGGTGT 61.056 63.158 0.86 0.00 45.59 4.16
4162 5315 2.056223 ATACGAGGGTCGGGGTGTG 61.056 63.158 0.86 0.00 45.59 3.82
4174 5327 4.314440 GGTGTGCGGTGAGGCAGA 62.314 66.667 0.00 0.00 44.93 4.26
4175 5328 2.740055 GTGTGCGGTGAGGCAGAG 60.740 66.667 0.00 0.00 44.93 3.35
4176 5329 2.917227 TGTGCGGTGAGGCAGAGA 60.917 61.111 0.00 0.00 44.93 3.10
4177 5330 2.125753 GTGCGGTGAGGCAGAGAG 60.126 66.667 0.00 0.00 44.93 3.20
4178 5331 2.283173 TGCGGTGAGGCAGAGAGA 60.283 61.111 0.00 0.00 38.17 3.10
4179 5332 1.908299 TGCGGTGAGGCAGAGAGAA 60.908 57.895 0.00 0.00 38.17 2.87
4180 5333 1.446966 GCGGTGAGGCAGAGAGAAC 60.447 63.158 0.00 0.00 0.00 3.01
4181 5334 1.216710 CGGTGAGGCAGAGAGAACC 59.783 63.158 0.00 0.00 0.00 3.62
4182 5335 1.216710 GGTGAGGCAGAGAGAACCG 59.783 63.158 0.00 0.00 0.00 4.44
4183 5336 1.251527 GGTGAGGCAGAGAGAACCGA 61.252 60.000 0.00 0.00 0.00 4.69
4184 5337 0.109039 GTGAGGCAGAGAGAACCGAC 60.109 60.000 0.00 0.00 0.00 4.79
4185 5338 0.539669 TGAGGCAGAGAGAACCGACA 60.540 55.000 0.00 0.00 0.00 4.35
4186 5339 0.109039 GAGGCAGAGAGAACCGACAC 60.109 60.000 0.00 0.00 0.00 3.67
4187 5340 0.827925 AGGCAGAGAGAACCGACACA 60.828 55.000 0.00 0.00 0.00 3.72
4188 5341 0.033504 GGCAGAGAGAACCGACACAA 59.966 55.000 0.00 0.00 0.00 3.33
4189 5342 1.423395 GCAGAGAGAACCGACACAAG 58.577 55.000 0.00 0.00 0.00 3.16
4190 5343 1.937108 GCAGAGAGAACCGACACAAGG 60.937 57.143 0.00 0.00 0.00 3.61
4191 5344 0.969894 AGAGAGAACCGACACAAGGG 59.030 55.000 0.00 0.00 0.00 3.95
4192 5345 0.966920 GAGAGAACCGACACAAGGGA 59.033 55.000 0.00 0.00 0.00 4.20
4193 5346 1.343465 GAGAGAACCGACACAAGGGAA 59.657 52.381 0.00 0.00 0.00 3.97
4194 5347 1.344763 AGAGAACCGACACAAGGGAAG 59.655 52.381 0.00 0.00 0.00 3.46
4195 5348 0.250338 AGAACCGACACAAGGGAAGC 60.250 55.000 0.00 0.00 0.00 3.86
4196 5349 1.566018 GAACCGACACAAGGGAAGCG 61.566 60.000 0.00 0.00 0.00 4.68
4197 5350 2.035237 AACCGACACAAGGGAAGCGA 62.035 55.000 0.00 0.00 0.00 4.93
4198 5351 2.027625 CCGACACAAGGGAAGCGAC 61.028 63.158 0.00 0.00 0.00 5.19
4199 5352 2.372690 CGACACAAGGGAAGCGACG 61.373 63.158 0.00 0.00 0.00 5.12
4200 5353 1.006571 GACACAAGGGAAGCGACGA 60.007 57.895 0.00 0.00 0.00 4.20
4201 5354 1.282930 GACACAAGGGAAGCGACGAC 61.283 60.000 0.00 0.00 0.00 4.34
4202 5355 2.049433 ACAAGGGAAGCGACGACG 60.049 61.111 2.12 2.12 42.93 5.12
4203 5356 2.257371 CAAGGGAAGCGACGACGA 59.743 61.111 12.29 0.00 42.66 4.20
4204 5357 2.087009 CAAGGGAAGCGACGACGAC 61.087 63.158 12.29 2.46 42.66 4.34
4205 5358 2.266627 AAGGGAAGCGACGACGACT 61.267 57.895 12.29 4.94 42.66 4.18
4206 5359 0.957395 AAGGGAAGCGACGACGACTA 60.957 55.000 12.29 0.00 42.66 2.59
4207 5360 1.062206 GGGAAGCGACGACGACTAG 59.938 63.158 12.29 0.00 42.66 2.57
4208 5361 1.583194 GGAAGCGACGACGACTAGC 60.583 63.158 12.29 1.00 42.66 3.42
4210 5363 2.288926 GAAGCGACGACGACTAGCGA 62.289 60.000 12.29 0.00 44.57 4.93
4211 5364 2.560172 AAGCGACGACGACTAGCGAC 62.560 60.000 12.29 6.33 44.57 5.19
4212 5365 2.774126 CGACGACGACTAGCGACA 59.226 61.111 0.00 0.00 44.57 4.35
4213 5366 1.577117 CGACGACGACTAGCGACAC 60.577 63.158 0.00 4.30 44.57 3.67
4214 5367 1.494628 GACGACGACTAGCGACACA 59.505 57.895 0.00 0.00 44.57 3.72
4215 5368 0.518764 GACGACGACTAGCGACACAG 60.519 60.000 0.00 3.18 44.57 3.66
4216 5369 1.226046 CGACGACTAGCGACACAGG 60.226 63.158 12.46 0.00 44.57 4.00
4217 5370 1.514443 GACGACTAGCGACACAGGC 60.514 63.158 12.46 0.00 44.57 4.85
4218 5371 2.196382 GACGACTAGCGACACAGGCA 62.196 60.000 12.46 0.00 44.57 4.75
4219 5372 1.080772 CGACTAGCGACACAGGCAA 60.081 57.895 0.98 0.00 44.57 4.52
4220 5373 1.073216 CGACTAGCGACACAGGCAAG 61.073 60.000 0.98 0.00 44.57 4.01
4221 5374 1.355066 GACTAGCGACACAGGCAAGC 61.355 60.000 0.00 0.00 0.00 4.01
4222 5375 1.079543 CTAGCGACACAGGCAAGCT 60.080 57.895 0.00 0.00 41.45 3.74
4223 5376 0.173481 CTAGCGACACAGGCAAGCTA 59.827 55.000 0.00 0.00 39.14 3.32
4224 5377 0.173481 TAGCGACACAGGCAAGCTAG 59.827 55.000 0.00 0.00 39.14 3.42
4225 5378 2.103042 GCGACACAGGCAAGCTAGG 61.103 63.158 0.00 0.00 0.00 3.02
4226 5379 1.591703 CGACACAGGCAAGCTAGGA 59.408 57.895 0.00 0.00 0.00 2.94
4227 5380 0.737715 CGACACAGGCAAGCTAGGAC 60.738 60.000 0.00 0.00 0.00 3.85
4228 5381 0.610687 GACACAGGCAAGCTAGGACT 59.389 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 154 2.838693 GGAGGGCCTCGACTACCC 60.839 72.222 26.54 8.50 44.62 3.69
154 155 1.381463 AAGGAGGGCCTCGACTACC 60.381 63.158 26.54 12.96 46.28 3.18
155 156 1.393487 GGAAGGAGGGCCTCGACTAC 61.393 65.000 26.54 12.76 46.28 2.73
156 157 1.076192 GGAAGGAGGGCCTCGACTA 60.076 63.158 26.54 0.00 46.28 2.59
157 158 2.364448 GGAAGGAGGGCCTCGACT 60.364 66.667 26.54 16.38 46.28 4.18
158 159 2.245438 CTTGGAAGGAGGGCCTCGAC 62.245 65.000 26.54 18.68 46.28 4.20
159 160 1.990060 CTTGGAAGGAGGGCCTCGA 60.990 63.158 26.54 3.13 46.28 4.04
160 161 1.965754 CTCTTGGAAGGAGGGCCTCG 61.966 65.000 26.54 11.47 46.28 4.63
161 162 1.631071 CCTCTTGGAAGGAGGGCCTC 61.631 65.000 25.80 25.80 46.28 4.70
163 164 3.002371 CCTCTTGGAAGGAGGGCC 58.998 66.667 0.00 0.00 44.71 5.80
168 169 1.616628 GGGCCTCCTCTTGGAAGGA 60.617 63.158 0.84 0.00 42.66 3.36
169 170 2.684499 GGGGCCTCCTCTTGGAAGG 61.684 68.421 0.84 0.00 42.66 3.46
171 172 1.925455 CTGGGGCCTCCTCTTGGAA 60.925 63.158 0.00 0.00 42.66 3.53
172 173 2.200373 ATCTGGGGCCTCCTCTTGGA 62.200 60.000 0.00 0.00 40.69 3.53
173 174 1.695597 ATCTGGGGCCTCCTCTTGG 60.696 63.158 0.00 0.00 36.20 3.61
174 175 1.704007 GGATCTGGGGCCTCCTCTTG 61.704 65.000 0.00 0.00 36.20 3.02
175 176 1.385206 GGATCTGGGGCCTCCTCTT 60.385 63.158 0.00 0.00 36.20 2.85
176 177 2.288643 GGATCTGGGGCCTCCTCT 59.711 66.667 0.00 0.00 36.20 3.69
177 178 2.851588 GGGATCTGGGGCCTCCTC 60.852 72.222 0.00 0.00 36.20 3.71
225 226 4.373116 TGAGGGGTTCTGCGACGC 62.373 66.667 14.19 14.19 0.00 5.19
226 227 2.125912 CTGAGGGGTTCTGCGACG 60.126 66.667 0.00 0.00 0.00 5.12
227 228 2.266055 CCTGAGGGGTTCTGCGAC 59.734 66.667 0.00 0.00 0.00 5.19
230 231 2.045536 CTGCCTGAGGGGTTCTGC 60.046 66.667 0.00 0.00 37.43 4.26
233 234 2.352805 CCACTGCCTGAGGGGTTC 59.647 66.667 0.00 0.00 41.01 3.62
238 239 4.463879 CTCCGCCACTGCCTGAGG 62.464 72.222 0.00 0.00 32.16 3.86
239 240 4.463879 CCTCCGCCACTGCCTGAG 62.464 72.222 0.00 0.00 34.35 3.35
243 244 4.785453 CTTCCCTCCGCCACTGCC 62.785 72.222 0.00 0.00 0.00 4.85
244 245 4.785453 CCTTCCCTCCGCCACTGC 62.785 72.222 0.00 0.00 0.00 4.40
245 246 4.101448 CCCTTCCCTCCGCCACTG 62.101 72.222 0.00 0.00 0.00 3.66
246 247 4.332543 TCCCTTCCCTCCGCCACT 62.333 66.667 0.00 0.00 0.00 4.00
247 248 3.787001 CTCCCTTCCCTCCGCCAC 61.787 72.222 0.00 0.00 0.00 5.01
248 249 3.984186 CTCTCCCTTCCCTCCGCCA 62.984 68.421 0.00 0.00 0.00 5.69
249 250 3.157949 CTCTCCCTTCCCTCCGCC 61.158 72.222 0.00 0.00 0.00 6.13
250 251 3.157949 CCTCTCCCTTCCCTCCGC 61.158 72.222 0.00 0.00 0.00 5.54
251 252 2.444895 CCCTCTCCCTTCCCTCCG 60.445 72.222 0.00 0.00 0.00 4.63
253 254 0.692756 CCTTCCCTCTCCCTTCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
254 255 1.398234 CCTTCCCTCTCCCTTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
255 256 1.694525 CCCTTCCCTCTCCCTTCCC 60.695 68.421 0.00 0.00 0.00 3.97
256 257 1.694525 CCCCTTCCCTCTCCCTTCC 60.695 68.421 0.00 0.00 0.00 3.46
257 258 0.253207 TTCCCCTTCCCTCTCCCTTC 60.253 60.000 0.00 0.00 0.00 3.46
260 261 1.911702 CGTTTCCCCTTCCCTCTCCC 61.912 65.000 0.00 0.00 0.00 4.30
261 262 1.602771 CGTTTCCCCTTCCCTCTCC 59.397 63.158 0.00 0.00 0.00 3.71
262 263 1.078356 GCGTTTCCCCTTCCCTCTC 60.078 63.158 0.00 0.00 0.00 3.20
263 264 2.955881 CGCGTTTCCCCTTCCCTCT 61.956 63.158 0.00 0.00 0.00 3.69
264 265 2.436115 CGCGTTTCCCCTTCCCTC 60.436 66.667 0.00 0.00 0.00 4.30
265 266 4.029809 CCGCGTTTCCCCTTCCCT 62.030 66.667 4.92 0.00 0.00 4.20
286 287 4.374702 GCAATCATAGCGCCGCCG 62.375 66.667 4.98 0.00 37.57 6.46
287 288 4.030452 GGCAATCATAGCGCCGCC 62.030 66.667 4.98 0.92 35.79 6.13
290 291 1.826385 AATAGGGCAATCATAGCGCC 58.174 50.000 2.29 0.00 44.98 6.53
292 293 4.154195 GTGGTTAATAGGGCAATCATAGCG 59.846 45.833 0.00 0.00 0.00 4.26
293 294 5.316987 AGTGGTTAATAGGGCAATCATAGC 58.683 41.667 0.00 0.00 0.00 2.97
294 295 9.167311 GAATAGTGGTTAATAGGGCAATCATAG 57.833 37.037 0.00 0.00 0.00 2.23
295 296 8.664992 TGAATAGTGGTTAATAGGGCAATCATA 58.335 33.333 0.00 0.00 0.00 2.15
296 297 7.526041 TGAATAGTGGTTAATAGGGCAATCAT 58.474 34.615 0.00 0.00 0.00 2.45
297 298 6.905736 TGAATAGTGGTTAATAGGGCAATCA 58.094 36.000 0.00 0.00 0.00 2.57
298 299 7.665559 TCATGAATAGTGGTTAATAGGGCAATC 59.334 37.037 0.00 0.00 0.00 2.67
299 300 7.526041 TCATGAATAGTGGTTAATAGGGCAAT 58.474 34.615 0.00 0.00 0.00 3.56
300 301 6.905736 TCATGAATAGTGGTTAATAGGGCAA 58.094 36.000 0.00 0.00 0.00 4.52
302 303 6.431234 CCTTCATGAATAGTGGTTAATAGGGC 59.569 42.308 8.96 0.00 0.00 5.19
303 304 7.445402 CACCTTCATGAATAGTGGTTAATAGGG 59.555 40.741 22.30 12.59 0.00 3.53
305 306 8.830580 CACACCTTCATGAATAGTGGTTAATAG 58.169 37.037 28.55 15.50 32.17 1.73
310 311 4.985538 ACACACCTTCATGAATAGTGGTT 58.014 39.130 28.55 18.45 32.17 3.67
312 313 5.008019 GCATACACACCTTCATGAATAGTGG 59.992 44.000 28.55 20.56 32.17 4.00
313 314 5.277011 CGCATACACACCTTCATGAATAGTG 60.277 44.000 25.79 25.79 33.36 2.74
314 315 4.811024 CGCATACACACCTTCATGAATAGT 59.189 41.667 8.96 7.01 0.00 2.12
315 316 4.212004 CCGCATACACACCTTCATGAATAG 59.788 45.833 8.96 6.35 0.00 1.73
316 317 4.126437 CCGCATACACACCTTCATGAATA 58.874 43.478 8.96 0.00 0.00 1.75
317 318 2.945008 CCGCATACACACCTTCATGAAT 59.055 45.455 8.96 0.00 0.00 2.57
320 321 1.737838 ACCGCATACACACCTTCATG 58.262 50.000 0.00 0.00 0.00 3.07
321 322 2.083774 CAACCGCATACACACCTTCAT 58.916 47.619 0.00 0.00 0.00 2.57
322 323 1.518325 CAACCGCATACACACCTTCA 58.482 50.000 0.00 0.00 0.00 3.02
323 324 0.802494 CCAACCGCATACACACCTTC 59.198 55.000 0.00 0.00 0.00 3.46
324 325 0.398696 TCCAACCGCATACACACCTT 59.601 50.000 0.00 0.00 0.00 3.50
325 326 0.036388 CTCCAACCGCATACACACCT 60.036 55.000 0.00 0.00 0.00 4.00
327 328 0.953471 TGCTCCAACCGCATACACAC 60.953 55.000 0.00 0.00 31.40 3.82
328 329 0.673333 CTGCTCCAACCGCATACACA 60.673 55.000 0.00 0.00 36.70 3.72
329 330 0.391130 TCTGCTCCAACCGCATACAC 60.391 55.000 0.00 0.00 36.70 2.90
331 332 0.940126 CATCTGCTCCAACCGCATAC 59.060 55.000 0.00 0.00 36.70 2.39
332 333 0.179048 CCATCTGCTCCAACCGCATA 60.179 55.000 0.00 0.00 36.70 3.14
333 334 1.452651 CCATCTGCTCCAACCGCAT 60.453 57.895 0.00 0.00 36.70 4.73
334 335 1.549243 TACCATCTGCTCCAACCGCA 61.549 55.000 0.00 0.00 35.80 5.69
335 336 0.811616 CTACCATCTGCTCCAACCGC 60.812 60.000 0.00 0.00 0.00 5.68
336 337 0.824109 TCTACCATCTGCTCCAACCG 59.176 55.000 0.00 0.00 0.00 4.44
337 338 2.111384 TCTCTACCATCTGCTCCAACC 58.889 52.381 0.00 0.00 0.00 3.77
338 339 3.494048 CCATCTCTACCATCTGCTCCAAC 60.494 52.174 0.00 0.00 0.00 3.77
339 340 2.702478 CCATCTCTACCATCTGCTCCAA 59.298 50.000 0.00 0.00 0.00 3.53
348 1330 1.202976 GCCCATTGCCATCTCTACCAT 60.203 52.381 0.00 0.00 0.00 3.55
352 1334 1.133699 CCTTGCCCATTGCCATCTCTA 60.134 52.381 0.00 0.00 40.16 2.43
367 1349 3.518068 GTGCCGCCCATACCTTGC 61.518 66.667 0.00 0.00 0.00 4.01
370 1352 2.045340 GTTGTGCCGCCCATACCT 60.045 61.111 0.00 0.00 0.00 3.08
371 1353 3.138128 GGTTGTGCCGCCCATACC 61.138 66.667 0.00 0.00 0.00 2.73
382 1365 0.817634 TTGGGCAGAACGAGGTTGTG 60.818 55.000 1.68 1.68 39.36 3.33
391 1374 1.182667 GGTATGGGTTTGGGCAGAAC 58.817 55.000 0.00 0.00 0.00 3.01
404 1387 6.433847 TCTATCCAGTTTATGTGGGTATGG 57.566 41.667 0.00 0.00 35.58 2.74
410 1393 4.881850 GGTGGTTCTATCCAGTTTATGTGG 59.118 45.833 0.00 0.00 38.23 4.17
439 1422 7.660208 ACAATAAAGTCATACGAGACCAAAACT 59.340 33.333 0.00 0.00 39.34 2.66
451 1449 5.009010 CAGGATGGCCACAATAAAGTCATAC 59.991 44.000 8.16 0.00 36.29 2.39
471 1476 1.270839 CGGCCTCTGAAAAAGACAGGA 60.271 52.381 0.00 0.00 36.22 3.86
473 1478 1.160137 CCGGCCTCTGAAAAAGACAG 58.840 55.000 0.00 0.00 36.80 3.51
513 1522 7.688372 ACTCATAAAATAGCGTCAAACTGATG 58.312 34.615 0.00 0.00 36.50 3.07
516 1525 9.988350 ATTAACTCATAAAATAGCGTCAAACTG 57.012 29.630 0.00 0.00 0.00 3.16
563 1572 8.319143 ACATTAGCTTTCTCTTAGCGTTTTTA 57.681 30.769 0.00 0.00 43.37 1.52
598 1607 6.342111 GTTACTTGTAAGCTAGAGCAGGATT 58.658 40.000 4.01 0.00 45.16 3.01
654 1745 2.203437 GGTTGGCCGGGTTGAACT 60.203 61.111 2.18 0.00 0.00 3.01
799 1903 4.113815 CGCATGGCCAAGGGGAGA 62.114 66.667 10.96 0.00 35.59 3.71
1216 2321 2.147387 AGGAGGAGTGGTTGCCGTT 61.147 57.895 0.00 0.00 0.00 4.44
1799 2918 4.171005 TCAATTCACGATCAGGAACGTAC 58.829 43.478 4.28 0.00 40.76 3.67
1807 2926 5.565592 TTCCCAAATCAATTCACGATCAG 57.434 39.130 0.00 0.00 0.00 2.90
2037 3156 2.257371 GTCACGCAGCCGTCAGTA 59.743 61.111 0.00 0.00 46.39 2.74
2067 3186 3.228017 TTGGACGGCGTCACCTCA 61.228 61.111 37.13 24.43 33.68 3.86
2564 3686 6.519679 TTCCTCCATTGTTCATGATCTTTG 57.480 37.500 0.00 0.00 34.31 2.77
2693 3821 0.530744 ATCGGCAGCTCTTCGTACAA 59.469 50.000 0.00 0.00 0.00 2.41
2827 3955 0.177836 TGTACGCCATCATCACCTGG 59.822 55.000 0.00 0.00 35.53 4.45
3157 4285 1.337118 GCTCCCTGATCTCCTCGATT 58.663 55.000 0.00 0.00 30.84 3.34
3331 4459 0.528901 CCACCATGCCATGCAATTCG 60.529 55.000 0.00 0.00 43.62 3.34
3553 4683 5.865085 AGCAAGAACCAATGTACTCTGTTA 58.135 37.500 0.00 0.00 0.00 2.41
3583 4713 5.330498 CGTATTCGCGAAAATAAAACATGGC 60.330 40.000 27.23 3.08 0.00 4.40
3679 4813 3.943381 CTCTTTGCTTCTGATGCCATGTA 59.057 43.478 12.33 0.00 0.00 2.29
3683 4817 2.865119 TCTCTTTGCTTCTGATGCCA 57.135 45.000 12.33 0.00 0.00 4.92
3684 4818 4.215827 CCATATCTCTTTGCTTCTGATGCC 59.784 45.833 12.33 0.00 0.00 4.40
3685 4819 5.061853 TCCATATCTCTTTGCTTCTGATGC 58.938 41.667 8.46 8.46 0.00 3.91
3686 4820 7.585867 CATTCCATATCTCTTTGCTTCTGATG 58.414 38.462 0.00 0.00 0.00 3.07
3687 4821 6.207025 GCATTCCATATCTCTTTGCTTCTGAT 59.793 38.462 0.00 0.00 0.00 2.90
3688 4822 5.530171 GCATTCCATATCTCTTTGCTTCTGA 59.470 40.000 0.00 0.00 0.00 3.27
3689 4823 5.531659 AGCATTCCATATCTCTTTGCTTCTG 59.468 40.000 0.00 0.00 35.57 3.02
3690 4824 5.692928 AGCATTCCATATCTCTTTGCTTCT 58.307 37.500 0.00 0.00 35.57 2.85
3717 4867 7.712205 GGGTTTAGTTGTGTAGTCTCTGTTTAA 59.288 37.037 0.00 0.00 0.00 1.52
3721 4871 4.652421 TGGGTTTAGTTGTGTAGTCTCTGT 59.348 41.667 0.00 0.00 0.00 3.41
3776 4929 4.219944 AGGTGCTATCTTGACGTCTTGTTA 59.780 41.667 17.92 7.80 0.00 2.41
3782 4935 3.232213 TGAAGGTGCTATCTTGACGTC 57.768 47.619 9.11 9.11 0.00 4.34
3788 4941 5.505181 TTCCTTCTTGAAGGTGCTATCTT 57.495 39.130 23.78 0.00 40.81 2.40
3789 4942 5.495640 CTTTCCTTCTTGAAGGTGCTATCT 58.504 41.667 23.78 0.00 40.81 1.98
3790 4943 4.095632 GCTTTCCTTCTTGAAGGTGCTATC 59.904 45.833 23.78 9.89 40.81 2.08
3791 4944 4.013050 GCTTTCCTTCTTGAAGGTGCTAT 58.987 43.478 23.78 0.00 40.81 2.97
3792 4945 3.412386 GCTTTCCTTCTTGAAGGTGCTA 58.588 45.455 23.78 6.82 40.81 3.49
3793 4946 2.234143 GCTTTCCTTCTTGAAGGTGCT 58.766 47.619 23.78 0.00 40.81 4.40
3794 4947 1.068954 CGCTTTCCTTCTTGAAGGTGC 60.069 52.381 23.78 22.51 40.81 5.01
3795 4948 2.224314 GTCGCTTTCCTTCTTGAAGGTG 59.776 50.000 23.78 17.12 40.81 4.00
3796 4949 2.495084 GTCGCTTTCCTTCTTGAAGGT 58.505 47.619 23.78 0.00 40.81 3.50
3797 4950 1.461127 CGTCGCTTTCCTTCTTGAAGG 59.539 52.381 20.21 20.21 41.35 3.46
3798 4951 1.136224 GCGTCGCTTTCCTTCTTGAAG 60.136 52.381 10.68 3.55 0.00 3.02
3799 4952 0.865769 GCGTCGCTTTCCTTCTTGAA 59.134 50.000 10.68 0.00 0.00 2.69
3800 4953 0.949105 GGCGTCGCTTTCCTTCTTGA 60.949 55.000 18.11 0.00 0.00 3.02
3801 4954 1.227999 TGGCGTCGCTTTCCTTCTTG 61.228 55.000 18.11 0.00 0.00 3.02
3802 4955 0.321653 ATGGCGTCGCTTTCCTTCTT 60.322 50.000 18.11 0.00 0.00 2.52
3803 4956 1.021390 CATGGCGTCGCTTTCCTTCT 61.021 55.000 18.11 0.00 0.00 2.85
3804 4957 1.019278 TCATGGCGTCGCTTTCCTTC 61.019 55.000 18.11 0.00 0.00 3.46
3805 4958 1.003839 TCATGGCGTCGCTTTCCTT 60.004 52.632 18.11 0.00 0.00 3.36
3806 4959 1.741770 GTCATGGCGTCGCTTTCCT 60.742 57.895 18.11 0.00 0.00 3.36
3807 4960 2.785258 GTCATGGCGTCGCTTTCC 59.215 61.111 18.11 0.17 0.00 3.13
3808 4961 2.395690 CGTCATGGCGTCGCTTTC 59.604 61.111 18.11 0.57 0.00 2.62
3809 4962 3.788766 GCGTCATGGCGTCGCTTT 61.789 61.111 22.33 1.60 46.66 3.51
3828 4981 4.562425 TCCGGATTGGATGGCGGC 62.562 66.667 0.00 0.00 43.74 6.53
3836 4989 0.462759 GCTCCAGTTCTCCGGATTGG 60.463 60.000 3.57 11.23 40.09 3.16
3837 4990 0.539051 AGCTCCAGTTCTCCGGATTG 59.461 55.000 3.57 1.23 0.00 2.67
3838 4991 2.035632 CTAGCTCCAGTTCTCCGGATT 58.964 52.381 3.57 0.00 0.00 3.01
3839 4992 1.698506 CTAGCTCCAGTTCTCCGGAT 58.301 55.000 3.57 0.00 0.00 4.18
3840 4993 0.395862 CCTAGCTCCAGTTCTCCGGA 60.396 60.000 2.93 2.93 0.00 5.14
3841 4994 1.395826 CCCTAGCTCCAGTTCTCCGG 61.396 65.000 0.00 0.00 0.00 5.14
3842 4995 0.684805 ACCCTAGCTCCAGTTCTCCG 60.685 60.000 0.00 0.00 0.00 4.63
3843 4996 1.574263 AACCCTAGCTCCAGTTCTCC 58.426 55.000 0.00 0.00 0.00 3.71
3844 4997 2.093394 GGAAACCCTAGCTCCAGTTCTC 60.093 54.545 0.00 0.00 0.00 2.87
3845 4998 1.909986 GGAAACCCTAGCTCCAGTTCT 59.090 52.381 0.00 0.00 0.00 3.01
3846 4999 2.404923 GGAAACCCTAGCTCCAGTTC 57.595 55.000 0.00 0.00 0.00 3.01
3860 5013 0.608640 TCTTCGAGCTCAGGGGAAAC 59.391 55.000 15.40 0.00 0.00 2.78
3861 5014 0.898320 CTCTTCGAGCTCAGGGGAAA 59.102 55.000 15.40 0.00 0.00 3.13
3862 5015 0.972983 CCTCTTCGAGCTCAGGGGAA 60.973 60.000 13.68 7.73 31.27 3.97
3863 5016 1.380515 CCTCTTCGAGCTCAGGGGA 60.381 63.158 13.68 0.00 31.27 4.81
3864 5017 2.430610 CCCTCTTCGAGCTCAGGGG 61.431 68.421 23.52 18.30 41.96 4.79
3865 5018 2.430610 CCCCTCTTCGAGCTCAGGG 61.431 68.421 24.05 24.05 44.92 4.45
3866 5019 3.087666 GCCCCTCTTCGAGCTCAGG 62.088 68.421 15.40 12.51 0.00 3.86
3867 5020 2.498726 GCCCCTCTTCGAGCTCAG 59.501 66.667 15.40 4.49 0.00 3.35
3868 5021 3.452786 CGCCCCTCTTCGAGCTCA 61.453 66.667 15.40 0.00 0.00 4.26
3869 5022 4.882396 GCGCCCCTCTTCGAGCTC 62.882 72.222 2.73 2.73 0.00 4.09
3872 5025 2.790791 ATCTGCGCCCCTCTTCGAG 61.791 63.158 4.18 0.00 0.00 4.04
3873 5026 2.759973 ATCTGCGCCCCTCTTCGA 60.760 61.111 4.18 0.00 0.00 3.71
3874 5027 2.578163 TTCATCTGCGCCCCTCTTCG 62.578 60.000 4.18 0.00 0.00 3.79
3875 5028 0.813210 CTTCATCTGCGCCCCTCTTC 60.813 60.000 4.18 0.00 0.00 2.87
3876 5029 1.222936 CTTCATCTGCGCCCCTCTT 59.777 57.895 4.18 0.00 0.00 2.85
3877 5030 2.739996 CCTTCATCTGCGCCCCTCT 61.740 63.158 4.18 0.00 0.00 3.69
3878 5031 2.203126 CCTTCATCTGCGCCCCTC 60.203 66.667 4.18 0.00 0.00 4.30
3879 5032 4.496336 GCCTTCATCTGCGCCCCT 62.496 66.667 4.18 0.00 0.00 4.79
3881 5034 4.802051 TGGCCTTCATCTGCGCCC 62.802 66.667 4.18 0.00 40.87 6.13
3882 5035 2.517875 ATGGCCTTCATCTGCGCC 60.518 61.111 4.18 0.00 41.99 6.53
3883 5036 2.719979 CATGGCCTTCATCTGCGC 59.280 61.111 3.32 0.00 32.92 6.09
3884 5037 2.842256 GCCATGGCCTTCATCTGCG 61.842 63.158 27.24 0.00 32.92 5.18
3885 5038 1.735376 CTGCCATGGCCTTCATCTGC 61.735 60.000 33.44 5.25 41.09 4.26
3886 5039 0.106868 TCTGCCATGGCCTTCATCTG 60.107 55.000 33.44 12.82 41.09 2.90
3887 5040 0.183014 CTCTGCCATGGCCTTCATCT 59.817 55.000 33.44 0.00 41.09 2.90
3888 5041 1.453762 GCTCTGCCATGGCCTTCATC 61.454 60.000 33.44 13.86 41.09 2.92
3889 5042 1.455217 GCTCTGCCATGGCCTTCAT 60.455 57.895 33.44 0.00 41.09 2.57
3890 5043 2.044650 GCTCTGCCATGGCCTTCA 60.045 61.111 33.44 14.41 41.09 3.02
3901 5054 1.068954 CGTTTTTCTTGGAGGCTCTGC 60.069 52.381 15.23 0.00 0.00 4.26
3902 5055 2.224314 GTCGTTTTTCTTGGAGGCTCTG 59.776 50.000 15.23 5.48 0.00 3.35
3903 5056 2.158813 TGTCGTTTTTCTTGGAGGCTCT 60.159 45.455 15.23 0.00 0.00 4.09
3904 5057 2.031944 GTGTCGTTTTTCTTGGAGGCTC 60.032 50.000 5.78 5.78 0.00 4.70
3905 5058 1.947456 GTGTCGTTTTTCTTGGAGGCT 59.053 47.619 0.00 0.00 0.00 4.58
3906 5059 1.001706 GGTGTCGTTTTTCTTGGAGGC 60.002 52.381 0.00 0.00 0.00 4.70
3907 5060 1.607148 GGGTGTCGTTTTTCTTGGAGG 59.393 52.381 0.00 0.00 0.00 4.30
3908 5061 1.263217 CGGGTGTCGTTTTTCTTGGAG 59.737 52.381 0.00 0.00 0.00 3.86
3909 5062 1.301423 CGGGTGTCGTTTTTCTTGGA 58.699 50.000 0.00 0.00 0.00 3.53
3910 5063 0.317519 GCGGGTGTCGTTTTTCTTGG 60.318 55.000 0.00 0.00 41.72 3.61
3911 5064 0.656205 CGCGGGTGTCGTTTTTCTTG 60.656 55.000 0.00 0.00 41.72 3.02
3912 5065 0.810823 TCGCGGGTGTCGTTTTTCTT 60.811 50.000 6.13 0.00 41.72 2.52
3913 5066 1.219522 CTCGCGGGTGTCGTTTTTCT 61.220 55.000 6.13 0.00 41.72 2.52
3914 5067 1.203313 CTCGCGGGTGTCGTTTTTC 59.797 57.895 6.13 0.00 41.72 2.29
3915 5068 2.888998 GCTCGCGGGTGTCGTTTTT 61.889 57.895 8.30 0.00 41.72 1.94
3916 5069 3.343421 GCTCGCGGGTGTCGTTTT 61.343 61.111 8.30 0.00 41.72 2.43
3937 5090 3.130160 GCTGGTGCTAGCAGTGGC 61.130 66.667 20.03 17.69 44.96 5.01
3944 5097 1.812922 CTCGGCTTGCTGGTGCTAG 60.813 63.158 1.30 0.00 43.20 3.42
3945 5098 2.265739 CTCGGCTTGCTGGTGCTA 59.734 61.111 1.30 0.00 40.48 3.49
3948 5101 2.467946 CTTTGCTCGGCTTGCTGGTG 62.468 60.000 1.30 0.00 0.00 4.17
3949 5102 2.203337 TTTGCTCGGCTTGCTGGT 60.203 55.556 1.30 0.00 0.00 4.00
3950 5103 1.310933 ATCTTTGCTCGGCTTGCTGG 61.311 55.000 1.30 0.00 0.00 4.85
3951 5104 0.524862 AATCTTTGCTCGGCTTGCTG 59.475 50.000 0.00 0.00 0.00 4.41
3952 5105 1.200948 GAAATCTTTGCTCGGCTTGCT 59.799 47.619 0.77 0.00 0.00 3.91
3953 5106 1.200948 AGAAATCTTTGCTCGGCTTGC 59.799 47.619 0.00 0.00 0.00 4.01
3954 5107 2.159462 GGAGAAATCTTTGCTCGGCTTG 60.159 50.000 0.00 0.00 0.00 4.01
3955 5108 2.087646 GGAGAAATCTTTGCTCGGCTT 58.912 47.619 0.00 0.00 0.00 4.35
3956 5109 1.680249 GGGAGAAATCTTTGCTCGGCT 60.680 52.381 0.00 0.00 0.00 5.52
3957 5110 0.735471 GGGAGAAATCTTTGCTCGGC 59.265 55.000 0.00 0.00 0.00 5.54
3958 5111 2.012673 CAGGGAGAAATCTTTGCTCGG 58.987 52.381 0.00 0.00 0.00 4.63
3959 5112 2.012673 CCAGGGAGAAATCTTTGCTCG 58.987 52.381 0.00 0.00 0.00 5.03
3960 5113 3.013219 GACCAGGGAGAAATCTTTGCTC 58.987 50.000 0.00 0.00 0.00 4.26
3961 5114 2.646798 AGACCAGGGAGAAATCTTTGCT 59.353 45.455 0.00 0.00 0.00 3.91
3962 5115 2.751806 CAGACCAGGGAGAAATCTTTGC 59.248 50.000 0.00 0.00 0.00 3.68
3963 5116 4.292186 TCAGACCAGGGAGAAATCTTTG 57.708 45.455 0.00 0.00 0.00 2.77
3964 5117 5.728741 AGTATCAGACCAGGGAGAAATCTTT 59.271 40.000 0.00 0.00 0.00 2.52
3965 5118 5.130145 CAGTATCAGACCAGGGAGAAATCTT 59.870 44.000 0.00 0.00 0.00 2.40
3966 5119 4.653341 CAGTATCAGACCAGGGAGAAATCT 59.347 45.833 0.00 0.00 0.00 2.40
3967 5120 4.651503 TCAGTATCAGACCAGGGAGAAATC 59.348 45.833 0.00 0.00 0.00 2.17
3968 5121 4.624913 TCAGTATCAGACCAGGGAGAAAT 58.375 43.478 0.00 0.00 0.00 2.17
3969 5122 4.026744 CTCAGTATCAGACCAGGGAGAAA 58.973 47.826 0.00 0.00 0.00 2.52
3970 5123 3.636679 CTCAGTATCAGACCAGGGAGAA 58.363 50.000 0.00 0.00 0.00 2.87
3971 5124 2.688214 GCTCAGTATCAGACCAGGGAGA 60.688 54.545 0.00 0.00 0.00 3.71
3972 5125 1.686052 GCTCAGTATCAGACCAGGGAG 59.314 57.143 0.00 0.00 0.00 4.30
3973 5126 1.289231 AGCTCAGTATCAGACCAGGGA 59.711 52.381 0.00 0.00 0.00 4.20
3974 5127 1.786937 AGCTCAGTATCAGACCAGGG 58.213 55.000 0.00 0.00 0.00 4.45
3975 5128 3.509575 GGATAGCTCAGTATCAGACCAGG 59.490 52.174 0.00 0.00 31.87 4.45
3976 5129 3.509575 GGGATAGCTCAGTATCAGACCAG 59.490 52.174 0.00 0.00 31.87 4.00
3977 5130 3.117131 TGGGATAGCTCAGTATCAGACCA 60.117 47.826 0.00 0.00 31.87 4.02
3978 5131 3.501349 TGGGATAGCTCAGTATCAGACC 58.499 50.000 0.00 0.00 31.87 3.85
3979 5132 5.537188 CTTTGGGATAGCTCAGTATCAGAC 58.463 45.833 0.00 0.00 31.87 3.51
3980 5133 4.039730 GCTTTGGGATAGCTCAGTATCAGA 59.960 45.833 0.00 0.00 35.74 3.27
3981 5134 4.314121 GCTTTGGGATAGCTCAGTATCAG 58.686 47.826 0.00 0.00 35.74 2.90
3982 5135 3.071602 GGCTTTGGGATAGCTCAGTATCA 59.928 47.826 0.00 0.00 38.67 2.15
3983 5136 3.669536 GGCTTTGGGATAGCTCAGTATC 58.330 50.000 0.00 0.00 38.67 2.24
3984 5137 2.037772 CGGCTTTGGGATAGCTCAGTAT 59.962 50.000 0.00 0.00 38.67 2.12
3985 5138 1.412710 CGGCTTTGGGATAGCTCAGTA 59.587 52.381 0.00 0.00 38.67 2.74
3986 5139 0.179000 CGGCTTTGGGATAGCTCAGT 59.821 55.000 0.00 0.00 38.67 3.41
3987 5140 1.162800 GCGGCTTTGGGATAGCTCAG 61.163 60.000 0.00 0.00 38.67 3.35
3988 5141 1.153168 GCGGCTTTGGGATAGCTCA 60.153 57.895 0.00 0.00 38.67 4.26
3989 5142 1.894282 GGCGGCTTTGGGATAGCTC 60.894 63.158 0.00 0.00 38.67 4.09
3990 5143 2.193248 GGCGGCTTTGGGATAGCT 59.807 61.111 0.00 0.00 38.67 3.32
3991 5144 3.279875 CGGCGGCTTTGGGATAGC 61.280 66.667 7.61 0.00 37.91 2.97
3992 5145 2.397413 ATCCGGCGGCTTTGGGATAG 62.397 60.000 23.83 0.00 37.51 2.08
3993 5146 2.391724 GATCCGGCGGCTTTGGGATA 62.392 60.000 23.83 0.00 39.32 2.59
3994 5147 3.774599 GATCCGGCGGCTTTGGGAT 62.775 63.158 23.83 14.54 41.83 3.85
3995 5148 4.483243 GATCCGGCGGCTTTGGGA 62.483 66.667 23.83 6.60 0.00 4.37
3998 5151 4.830765 TCGGATCCGGCGGCTTTG 62.831 66.667 32.79 11.43 40.25 2.77
3999 5152 2.886730 ATTTCGGATCCGGCGGCTTT 62.887 55.000 32.79 8.49 40.25 3.51
4000 5153 3.400599 ATTTCGGATCCGGCGGCTT 62.401 57.895 32.79 11.50 40.25 4.35
4001 5154 3.809374 GATTTCGGATCCGGCGGCT 62.809 63.158 32.79 13.03 40.25 5.52
4002 5155 3.346606 GATTTCGGATCCGGCGGC 61.347 66.667 32.79 16.78 40.25 6.53
4003 5156 1.956170 CAGATTTCGGATCCGGCGG 60.956 63.158 32.79 22.51 40.25 6.13
4004 5157 1.227263 ACAGATTTCGGATCCGGCG 60.227 57.895 32.79 16.88 40.25 6.46
4005 5158 0.179084 TCACAGATTTCGGATCCGGC 60.179 55.000 32.79 19.29 40.25 6.13
4006 5159 2.138320 CATCACAGATTTCGGATCCGG 58.862 52.381 32.79 18.28 40.25 5.14
4007 5160 2.138320 CCATCACAGATTTCGGATCCG 58.862 52.381 28.62 28.62 41.35 4.18
4008 5161 2.498167 CCCATCACAGATTTCGGATCC 58.502 52.381 0.00 0.00 0.00 3.36
4009 5162 2.104792 TCCCCATCACAGATTTCGGATC 59.895 50.000 0.00 0.00 0.00 3.36
4010 5163 2.126882 TCCCCATCACAGATTTCGGAT 58.873 47.619 0.00 0.00 0.00 4.18
4011 5164 1.578897 TCCCCATCACAGATTTCGGA 58.421 50.000 0.00 0.00 0.00 4.55
4012 5165 2.292267 CTTCCCCATCACAGATTTCGG 58.708 52.381 0.00 0.00 0.00 4.30
4013 5166 1.672881 GCTTCCCCATCACAGATTTCG 59.327 52.381 0.00 0.00 0.00 3.46
4014 5167 2.027385 GGCTTCCCCATCACAGATTTC 58.973 52.381 0.00 0.00 0.00 2.17
4015 5168 1.683011 CGGCTTCCCCATCACAGATTT 60.683 52.381 0.00 0.00 0.00 2.17
4016 5169 0.107017 CGGCTTCCCCATCACAGATT 60.107 55.000 0.00 0.00 0.00 2.40
4017 5170 1.528824 CGGCTTCCCCATCACAGAT 59.471 57.895 0.00 0.00 0.00 2.90
4018 5171 2.989639 CGGCTTCCCCATCACAGA 59.010 61.111 0.00 0.00 0.00 3.41
4019 5172 2.825836 GCGGCTTCCCCATCACAG 60.826 66.667 0.00 0.00 0.00 3.66
4020 5173 3.626996 CTGCGGCTTCCCCATCACA 62.627 63.158 0.00 0.00 0.00 3.58
4021 5174 2.825836 CTGCGGCTTCCCCATCAC 60.826 66.667 0.00 0.00 0.00 3.06
4022 5175 2.905996 AACTGCGGCTTCCCCATCA 61.906 57.895 0.00 0.00 0.00 3.07
4023 5176 2.044946 AACTGCGGCTTCCCCATC 60.045 61.111 0.00 0.00 0.00 3.51
4024 5177 2.361610 CAACTGCGGCTTCCCCAT 60.362 61.111 0.00 0.00 0.00 4.00
4025 5178 4.659172 CCAACTGCGGCTTCCCCA 62.659 66.667 0.00 0.00 0.00 4.96
4034 5187 3.726517 CAACTCCGGCCAACTGCG 61.727 66.667 2.24 0.00 42.61 5.18
4035 5188 4.043200 GCAACTCCGGCCAACTGC 62.043 66.667 2.24 0.00 40.16 4.40
4042 5195 2.032681 AGACTTGGCAACTCCGGC 59.967 61.111 0.00 0.00 37.80 6.13
4043 5196 0.535102 AACAGACTTGGCAACTCCGG 60.535 55.000 0.00 0.00 37.80 5.14
4044 5197 0.588252 CAACAGACTTGGCAACTCCG 59.412 55.000 0.00 0.00 37.80 4.63
4045 5198 0.954452 CCAACAGACTTGGCAACTCC 59.046 55.000 0.00 0.00 32.18 3.85
4046 5199 1.876156 CTCCAACAGACTTGGCAACTC 59.124 52.381 0.00 0.00 39.38 3.01
4047 5200 1.477558 CCTCCAACAGACTTGGCAACT 60.478 52.381 0.00 0.00 39.38 3.16
4048 5201 0.954452 CCTCCAACAGACTTGGCAAC 59.046 55.000 0.00 0.00 39.38 4.17
4049 5202 0.178992 CCCTCCAACAGACTTGGCAA 60.179 55.000 0.00 0.00 39.38 4.52
4050 5203 1.352622 ACCCTCCAACAGACTTGGCA 61.353 55.000 0.00 0.00 39.38 4.92
4051 5204 0.178990 AACCCTCCAACAGACTTGGC 60.179 55.000 0.00 0.00 39.38 4.52
4052 5205 1.609208 CAACCCTCCAACAGACTTGG 58.391 55.000 0.00 0.00 40.87 3.61
4053 5206 1.609208 CCAACCCTCCAACAGACTTG 58.391 55.000 0.00 0.00 0.00 3.16
4054 5207 0.178990 GCCAACCCTCCAACAGACTT 60.179 55.000 0.00 0.00 0.00 3.01
4055 5208 1.456287 GCCAACCCTCCAACAGACT 59.544 57.895 0.00 0.00 0.00 3.24
4056 5209 1.603739 GGCCAACCCTCCAACAGAC 60.604 63.158 0.00 0.00 0.00 3.51
4057 5210 2.843545 GGCCAACCCTCCAACAGA 59.156 61.111 0.00 0.00 0.00 3.41
4058 5211 2.672996 CGGCCAACCCTCCAACAG 60.673 66.667 2.24 0.00 0.00 3.16
4059 5212 4.966787 GCGGCCAACCCTCCAACA 62.967 66.667 2.24 0.00 0.00 3.33
4060 5213 4.660938 AGCGGCCAACCCTCCAAC 62.661 66.667 2.24 0.00 0.00 3.77
4061 5214 4.659172 CAGCGGCCAACCCTCCAA 62.659 66.667 2.24 0.00 0.00 3.53
4064 5217 4.344865 TTCCAGCGGCCAACCCTC 62.345 66.667 2.24 0.00 0.00 4.30
4065 5218 4.351054 CTTCCAGCGGCCAACCCT 62.351 66.667 2.24 0.00 0.00 4.34
4067 5220 4.660938 ACCTTCCAGCGGCCAACC 62.661 66.667 2.24 0.00 0.00 3.77
4068 5221 3.365265 CACCTTCCAGCGGCCAAC 61.365 66.667 2.24 0.00 0.00 3.77
4069 5222 4.659172 CCACCTTCCAGCGGCCAA 62.659 66.667 2.24 0.00 0.00 4.52
4090 5243 4.293648 TGTGTCCGGTGTCGCCAG 62.294 66.667 0.00 0.00 36.97 4.85
4091 5244 4.595538 GTGTGTCCGGTGTCGCCA 62.596 66.667 0.00 0.00 36.97 5.69
4093 5246 4.634133 TCGTGTGTCCGGTGTCGC 62.634 66.667 0.00 0.85 34.56 5.19
4094 5247 2.728383 GTCGTGTGTCCGGTGTCG 60.728 66.667 0.00 1.10 0.00 4.35
4095 5248 0.241749 TATGTCGTGTGTCCGGTGTC 59.758 55.000 0.00 0.00 0.00 3.67
4096 5249 0.242825 CTATGTCGTGTGTCCGGTGT 59.757 55.000 0.00 0.00 0.00 4.16
4097 5250 0.457853 CCTATGTCGTGTGTCCGGTG 60.458 60.000 0.00 0.00 0.00 4.94
4098 5251 0.609957 TCCTATGTCGTGTGTCCGGT 60.610 55.000 0.00 0.00 0.00 5.28
4099 5252 0.744874 ATCCTATGTCGTGTGTCCGG 59.255 55.000 0.00 0.00 0.00 5.14
4100 5253 1.676529 AGATCCTATGTCGTGTGTCCG 59.323 52.381 0.00 0.00 0.00 4.79
4101 5254 3.304794 GCTAGATCCTATGTCGTGTGTCC 60.305 52.174 0.00 0.00 0.00 4.02
4102 5255 3.315470 TGCTAGATCCTATGTCGTGTGTC 59.685 47.826 0.00 0.00 0.00 3.67
4103 5256 3.066900 GTGCTAGATCCTATGTCGTGTGT 59.933 47.826 0.00 0.00 0.00 3.72
4104 5257 3.551046 GGTGCTAGATCCTATGTCGTGTG 60.551 52.174 0.00 0.00 0.00 3.82
4105 5258 2.623889 GGTGCTAGATCCTATGTCGTGT 59.376 50.000 0.00 0.00 0.00 4.49
4106 5259 2.623416 TGGTGCTAGATCCTATGTCGTG 59.377 50.000 0.00 0.00 0.00 4.35
4107 5260 2.887783 CTGGTGCTAGATCCTATGTCGT 59.112 50.000 0.00 0.00 0.00 4.34
4108 5261 2.230025 CCTGGTGCTAGATCCTATGTCG 59.770 54.545 0.00 0.00 0.00 4.35
4109 5262 2.028567 GCCTGGTGCTAGATCCTATGTC 60.029 54.545 0.00 0.00 36.87 3.06
4110 5263 1.974236 GCCTGGTGCTAGATCCTATGT 59.026 52.381 0.00 0.00 36.87 2.29
4111 5264 1.973515 TGCCTGGTGCTAGATCCTATG 59.026 52.381 0.00 0.00 42.00 2.23
4112 5265 2.405618 TGCCTGGTGCTAGATCCTAT 57.594 50.000 0.00 0.00 42.00 2.57
4113 5266 2.042464 CTTGCCTGGTGCTAGATCCTA 58.958 52.381 0.00 0.00 44.38 2.94
4114 5267 0.835941 CTTGCCTGGTGCTAGATCCT 59.164 55.000 0.00 0.00 44.38 3.24
4115 5268 0.179034 CCTTGCCTGGTGCTAGATCC 60.179 60.000 0.00 0.00 44.38 3.36
4116 5269 0.543749 ACCTTGCCTGGTGCTAGATC 59.456 55.000 0.00 0.00 44.38 2.75
4117 5270 2.702093 ACCTTGCCTGGTGCTAGAT 58.298 52.632 0.00 0.00 44.38 1.98
4118 5271 4.232905 ACCTTGCCTGGTGCTAGA 57.767 55.556 0.00 0.00 44.38 2.43
4124 5277 2.833913 CCTCCACACCTTGCCTGGT 61.834 63.158 0.00 0.00 41.77 4.00
4125 5278 2.034687 CCTCCACACCTTGCCTGG 59.965 66.667 0.00 0.00 0.00 4.45
4126 5279 2.674380 GCCTCCACACCTTGCCTG 60.674 66.667 0.00 0.00 0.00 4.85
4127 5280 1.207488 TATGCCTCCACACCTTGCCT 61.207 55.000 0.00 0.00 0.00 4.75
4128 5281 1.032114 GTATGCCTCCACACCTTGCC 61.032 60.000 0.00 0.00 0.00 4.52
4129 5282 1.369091 CGTATGCCTCCACACCTTGC 61.369 60.000 0.00 0.00 0.00 4.01
4130 5283 0.249120 TCGTATGCCTCCACACCTTG 59.751 55.000 0.00 0.00 0.00 3.61
4131 5284 0.537188 CTCGTATGCCTCCACACCTT 59.463 55.000 0.00 0.00 0.00 3.50
4132 5285 1.330655 CCTCGTATGCCTCCACACCT 61.331 60.000 0.00 0.00 0.00 4.00
4133 5286 1.144057 CCTCGTATGCCTCCACACC 59.856 63.158 0.00 0.00 0.00 4.16
4134 5287 1.144057 CCCTCGTATGCCTCCACAC 59.856 63.158 0.00 0.00 0.00 3.82
4135 5288 1.305802 ACCCTCGTATGCCTCCACA 60.306 57.895 0.00 0.00 0.00 4.17
4136 5289 1.442148 GACCCTCGTATGCCTCCAC 59.558 63.158 0.00 0.00 0.00 4.02
4137 5290 2.125326 CGACCCTCGTATGCCTCCA 61.125 63.158 0.00 0.00 34.72 3.86
4138 5291 2.728817 CGACCCTCGTATGCCTCC 59.271 66.667 0.00 0.00 34.72 4.30
4139 5292 2.728817 CCGACCCTCGTATGCCTC 59.271 66.667 0.00 0.00 38.40 4.70
4140 5293 2.838225 CCCGACCCTCGTATGCCT 60.838 66.667 0.00 0.00 38.40 4.75
4141 5294 3.925090 CCCCGACCCTCGTATGCC 61.925 72.222 0.00 0.00 38.40 4.40
4142 5295 3.152400 ACCCCGACCCTCGTATGC 61.152 66.667 0.00 0.00 38.40 3.14
4143 5296 2.056223 ACACCCCGACCCTCGTATG 61.056 63.158 0.00 0.00 38.40 2.39
4144 5297 2.056223 CACACCCCGACCCTCGTAT 61.056 63.158 0.00 0.00 38.40 3.06
4145 5298 2.677524 CACACCCCGACCCTCGTA 60.678 66.667 0.00 0.00 38.40 3.43
4157 5310 4.314440 TCTGCCTCACCGCACACC 62.314 66.667 0.00 0.00 34.35 4.16
4158 5311 2.740055 CTCTGCCTCACCGCACAC 60.740 66.667 0.00 0.00 34.35 3.82
4159 5312 2.917227 TCTCTGCCTCACCGCACA 60.917 61.111 0.00 0.00 34.35 4.57
4160 5313 2.125753 CTCTCTGCCTCACCGCAC 60.126 66.667 0.00 0.00 34.35 5.34
4161 5314 1.908299 TTCTCTCTGCCTCACCGCA 60.908 57.895 0.00 0.00 37.19 5.69
4162 5315 1.446966 GTTCTCTCTGCCTCACCGC 60.447 63.158 0.00 0.00 0.00 5.68
4163 5316 1.216710 GGTTCTCTCTGCCTCACCG 59.783 63.158 0.00 0.00 0.00 4.94
4164 5317 1.216710 CGGTTCTCTCTGCCTCACC 59.783 63.158 0.00 0.00 0.00 4.02
4165 5318 0.109039 GTCGGTTCTCTCTGCCTCAC 60.109 60.000 0.00 0.00 0.00 3.51
4166 5319 0.539669 TGTCGGTTCTCTCTGCCTCA 60.540 55.000 0.00 0.00 0.00 3.86
4167 5320 0.109039 GTGTCGGTTCTCTCTGCCTC 60.109 60.000 0.00 0.00 0.00 4.70
4168 5321 0.827925 TGTGTCGGTTCTCTCTGCCT 60.828 55.000 0.00 0.00 0.00 4.75
4169 5322 0.033504 TTGTGTCGGTTCTCTCTGCC 59.966 55.000 0.00 0.00 0.00 4.85
4170 5323 1.423395 CTTGTGTCGGTTCTCTCTGC 58.577 55.000 0.00 0.00 0.00 4.26
4171 5324 1.337260 CCCTTGTGTCGGTTCTCTCTG 60.337 57.143 0.00 0.00 0.00 3.35
4172 5325 0.969894 CCCTTGTGTCGGTTCTCTCT 59.030 55.000 0.00 0.00 0.00 3.10
4173 5326 0.966920 TCCCTTGTGTCGGTTCTCTC 59.033 55.000 0.00 0.00 0.00 3.20
4174 5327 1.344763 CTTCCCTTGTGTCGGTTCTCT 59.655 52.381 0.00 0.00 0.00 3.10
4175 5328 1.797025 CTTCCCTTGTGTCGGTTCTC 58.203 55.000 0.00 0.00 0.00 2.87
4176 5329 0.250338 GCTTCCCTTGTGTCGGTTCT 60.250 55.000 0.00 0.00 0.00 3.01
4177 5330 1.566018 CGCTTCCCTTGTGTCGGTTC 61.566 60.000 0.00 0.00 0.00 3.62
4178 5331 1.597027 CGCTTCCCTTGTGTCGGTT 60.597 57.895 0.00 0.00 0.00 4.44
4179 5332 2.030562 CGCTTCCCTTGTGTCGGT 59.969 61.111 0.00 0.00 0.00 4.69
4180 5333 2.027625 GTCGCTTCCCTTGTGTCGG 61.028 63.158 0.00 0.00 0.00 4.79
4181 5334 2.372690 CGTCGCTTCCCTTGTGTCG 61.373 63.158 0.00 0.00 0.00 4.35
4182 5335 1.006571 TCGTCGCTTCCCTTGTGTC 60.007 57.895 0.00 0.00 0.00 3.67
4183 5336 1.300697 GTCGTCGCTTCCCTTGTGT 60.301 57.895 0.00 0.00 0.00 3.72
4184 5337 2.372690 CGTCGTCGCTTCCCTTGTG 61.373 63.158 0.00 0.00 0.00 3.33
4185 5338 2.049433 CGTCGTCGCTTCCCTTGT 60.049 61.111 0.00 0.00 0.00 3.16
4186 5339 2.087009 GTCGTCGTCGCTTCCCTTG 61.087 63.158 0.00 0.00 36.96 3.61
4187 5340 0.957395 TAGTCGTCGTCGCTTCCCTT 60.957 55.000 0.00 0.00 36.96 3.95
4188 5341 1.367599 CTAGTCGTCGTCGCTTCCCT 61.368 60.000 0.00 0.00 36.96 4.20
4189 5342 1.062206 CTAGTCGTCGTCGCTTCCC 59.938 63.158 0.00 0.00 36.96 3.97
4190 5343 1.583194 GCTAGTCGTCGTCGCTTCC 60.583 63.158 0.00 0.00 36.96 3.46
4191 5344 1.928769 CGCTAGTCGTCGTCGCTTC 60.929 63.158 0.00 0.00 36.96 3.86
4192 5345 2.097918 CGCTAGTCGTCGTCGCTT 59.902 61.111 0.00 0.00 36.96 4.68
4193 5346 2.812609 TCGCTAGTCGTCGTCGCT 60.813 61.111 0.00 0.97 39.67 4.93
4194 5347 2.644095 GTCGCTAGTCGTCGTCGC 60.644 66.667 0.00 0.00 39.67 5.19
4195 5348 1.577117 GTGTCGCTAGTCGTCGTCG 60.577 63.158 0.00 0.00 39.67 5.12
4196 5349 0.518764 CTGTGTCGCTAGTCGTCGTC 60.519 60.000 6.49 0.00 39.67 4.20
4197 5350 1.496393 CTGTGTCGCTAGTCGTCGT 59.504 57.895 6.49 0.00 39.67 4.34
4198 5351 1.226046 CCTGTGTCGCTAGTCGTCG 60.226 63.158 6.49 0.00 39.67 5.12
4199 5352 1.514443 GCCTGTGTCGCTAGTCGTC 60.514 63.158 6.49 2.64 39.67 4.20
4200 5353 1.802337 TTGCCTGTGTCGCTAGTCGT 61.802 55.000 6.49 0.00 39.67 4.34
4201 5354 1.073216 CTTGCCTGTGTCGCTAGTCG 61.073 60.000 0.00 0.00 40.15 4.18
4202 5355 1.355066 GCTTGCCTGTGTCGCTAGTC 61.355 60.000 0.00 0.00 32.57 2.59
4203 5356 1.374758 GCTTGCCTGTGTCGCTAGT 60.375 57.895 0.00 0.00 32.57 2.57
4204 5357 0.173481 TAGCTTGCCTGTGTCGCTAG 59.827 55.000 0.00 0.00 33.04 3.42
4205 5358 0.173481 CTAGCTTGCCTGTGTCGCTA 59.827 55.000 0.00 0.00 32.49 4.26
4206 5359 1.079543 CTAGCTTGCCTGTGTCGCT 60.080 57.895 0.00 0.00 34.88 4.93
4207 5360 2.103042 CCTAGCTTGCCTGTGTCGC 61.103 63.158 0.00 0.00 0.00 5.19
4208 5361 0.737715 GTCCTAGCTTGCCTGTGTCG 60.738 60.000 0.00 0.00 0.00 4.35
4209 5362 0.610687 AGTCCTAGCTTGCCTGTGTC 59.389 55.000 0.00 0.00 0.00 3.67
4210 5363 0.322975 CAGTCCTAGCTTGCCTGTGT 59.677 55.000 0.00 0.00 0.00 3.72
4211 5364 3.149899 CAGTCCTAGCTTGCCTGTG 57.850 57.895 0.00 0.00 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.