Multiple sequence alignment - TraesCS6D01G144400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G144400 chr6D 100.000 4128 0 0 1 4128 115023678 115019551 0.000000e+00 7624.0
1 TraesCS6D01G144400 chr6B 93.808 2261 73 16 1929 4128 204334639 204332385 0.000000e+00 3338.0
2 TraesCS6D01G144400 chr6B 90.421 1284 58 28 491 1732 204335985 204334725 0.000000e+00 1629.0
3 TraesCS6D01G144400 chr6B 98.824 85 1 0 1837 1921 204334645 204334729 7.150000e-33 152.0
4 TraesCS6D01G144400 chr6A 94.198 1896 85 13 2252 4128 143377700 143375811 0.000000e+00 2868.0
5 TraesCS6D01G144400 chr6A 87.601 1242 52 38 525 1700 143379364 143378159 0.000000e+00 1347.0
6 TraesCS6D01G144400 chr6A 93.521 355 20 3 1854 2206 143378150 143377797 3.660000e-145 525.0
7 TraesCS6D01G144400 chr6A 93.878 49 3 0 2525 2573 520869916 520869964 1.590000e-09 75.0
8 TraesCS6D01G144400 chr7D 91.837 49 4 0 996 1044 587120741 587120693 7.400000e-08 69.4
9 TraesCS6D01G144400 chr7A 91.837 49 4 0 996 1044 678971048 678971000 7.400000e-08 69.4
10 TraesCS6D01G144400 chr7B 93.333 45 3 0 1000 1044 658221333 658221289 2.660000e-07 67.6
11 TraesCS6D01G144400 chr5D 84.375 64 8 2 2531 2593 113391591 113391529 1.240000e-05 62.1
12 TraesCS6D01G144400 chr5B 84.375 64 8 2 2531 2593 123760775 123760713 1.240000e-05 62.1
13 TraesCS6D01G144400 chr5A 84.375 64 8 2 2531 2593 118670816 118670754 1.240000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G144400 chr6D 115019551 115023678 4127 True 7624.0 7624 100.000000 1 4128 1 chr6D.!!$R1 4127
1 TraesCS6D01G144400 chr6B 204332385 204335985 3600 True 2483.5 3338 92.114500 491 4128 2 chr6B.!!$R1 3637
2 TraesCS6D01G144400 chr6A 143375811 143379364 3553 True 1580.0 2868 91.773333 525 4128 3 chr6A.!!$R1 3603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
631 644 0.030908 CGCGGTGACTAGGATCCTTC 59.969 60.0 22.03 13.25 0.00 3.46 F
1824 1922 0.250858 TAACTGTCACCGACCGAGGA 60.251 55.0 0.00 0.00 34.73 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 2058 0.033208 TGAGGGCCTGCTTAATTGGG 60.033 55.0 12.95 0.0 0.0 4.12 R
3383 3556 1.789576 ATGGCGGGAAAGGGAAGTGT 61.790 55.0 0.00 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.535425 CGAATAGCTCGCCCTACG 57.465 61.111 0.00 0.00 41.49 3.51
21 22 1.653115 CGAATAGCTCGCCCTACGT 59.347 57.895 0.00 0.00 41.49 3.57
22 23 0.870393 CGAATAGCTCGCCCTACGTA 59.130 55.000 0.00 0.00 41.49 3.57
23 24 1.467734 CGAATAGCTCGCCCTACGTAT 59.532 52.381 0.00 0.00 41.49 3.06
24 25 2.475852 CGAATAGCTCGCCCTACGTATC 60.476 54.545 0.00 0.00 41.49 2.24
25 26 2.195741 ATAGCTCGCCCTACGTATCA 57.804 50.000 0.00 0.00 44.19 2.15
26 27 1.233019 TAGCTCGCCCTACGTATCAC 58.767 55.000 0.00 0.00 44.19 3.06
27 28 1.007618 GCTCGCCCTACGTATCACC 60.008 63.158 0.00 0.00 44.19 4.02
28 29 1.281960 CTCGCCCTACGTATCACCG 59.718 63.158 0.00 0.00 44.19 4.94
29 30 1.442526 CTCGCCCTACGTATCACCGT 61.443 60.000 0.00 0.00 44.19 4.83
30 31 1.009222 CGCCCTACGTATCACCGTC 60.009 63.158 0.00 0.00 42.00 4.79
31 32 1.361632 GCCCTACGTATCACCGTCC 59.638 63.158 0.00 0.00 42.00 4.79
32 33 1.650912 CCCTACGTATCACCGTCCG 59.349 63.158 0.00 0.00 42.00 4.79
33 34 1.009222 CCTACGTATCACCGTCCGC 60.009 63.158 0.00 0.00 42.00 5.54
34 35 1.009222 CTACGTATCACCGTCCGCC 60.009 63.158 0.00 0.00 42.00 6.13
35 36 2.706523 CTACGTATCACCGTCCGCCG 62.707 65.000 0.00 0.00 42.00 6.46
52 53 3.773370 GGTCCTCGCCGATGGATA 58.227 61.111 8.22 0.00 34.58 2.59
53 54 2.046938 GGTCCTCGCCGATGGATAA 58.953 57.895 8.22 0.00 34.58 1.75
54 55 0.038159 GGTCCTCGCCGATGGATAAG 60.038 60.000 8.22 0.00 34.58 1.73
55 56 0.038159 GTCCTCGCCGATGGATAAGG 60.038 60.000 8.22 0.00 34.58 2.69
56 57 1.185618 TCCTCGCCGATGGATAAGGG 61.186 60.000 1.85 0.00 0.00 3.95
57 58 1.293498 CTCGCCGATGGATAAGGGG 59.707 63.158 0.00 0.00 39.06 4.79
58 59 2.358737 CGCCGATGGATAAGGGGC 60.359 66.667 0.00 0.00 40.36 5.80
59 60 2.358737 GCCGATGGATAAGGGGCG 60.359 66.667 0.00 0.00 33.58 6.13
60 61 3.148084 CCGATGGATAAGGGGCGT 58.852 61.111 0.00 0.00 0.00 5.68
61 62 1.301716 CCGATGGATAAGGGGCGTG 60.302 63.158 0.00 0.00 0.00 5.34
62 63 1.961277 CGATGGATAAGGGGCGTGC 60.961 63.158 0.00 0.00 0.00 5.34
63 64 1.961277 GATGGATAAGGGGCGTGCG 60.961 63.158 0.00 0.00 0.00 5.34
64 65 4.849310 TGGATAAGGGGCGTGCGC 62.849 66.667 8.17 8.17 41.06 6.09
65 66 4.547367 GGATAAGGGGCGTGCGCT 62.547 66.667 16.21 0.00 41.60 5.92
66 67 2.967615 GATAAGGGGCGTGCGCTC 60.968 66.667 16.21 12.43 41.76 5.03
67 68 4.891727 ATAAGGGGCGTGCGCTCG 62.892 66.667 26.07 26.07 43.83 5.03
75 76 4.767841 CGTGCGCTCGAGCTCTGT 62.768 66.667 32.88 0.00 39.32 3.41
76 77 3.177920 GTGCGCTCGAGCTCTGTG 61.178 66.667 32.88 19.04 39.32 3.66
80 81 3.768922 GCTCGAGCTCTGTGCCCT 61.769 66.667 29.88 0.00 44.23 5.19
81 82 2.493973 CTCGAGCTCTGTGCCCTC 59.506 66.667 12.85 0.00 44.23 4.30
82 83 3.071206 TCGAGCTCTGTGCCCTCC 61.071 66.667 12.85 0.00 44.23 4.30
83 84 4.154347 CGAGCTCTGTGCCCTCCC 62.154 72.222 12.85 0.00 44.23 4.30
84 85 3.791586 GAGCTCTGTGCCCTCCCC 61.792 72.222 6.43 0.00 44.23 4.81
87 88 2.765807 CTCTGTGCCCTCCCCGAT 60.766 66.667 0.00 0.00 0.00 4.18
88 89 3.083349 TCTGTGCCCTCCCCGATG 61.083 66.667 0.00 0.00 0.00 3.84
89 90 4.181010 CTGTGCCCTCCCCGATGG 62.181 72.222 0.00 0.00 0.00 3.51
96 97 3.554342 CTCCCCGATGGCCTGGAG 61.554 72.222 3.32 7.83 38.56 3.86
139 140 4.966005 TCGAAGAGGCAACGAGTG 57.034 55.556 0.00 0.00 46.39 3.51
140 141 1.289066 TCGAAGAGGCAACGAGTGG 59.711 57.895 0.00 0.00 46.39 4.00
147 148 3.357079 GCAACGAGTGGCCAGTGG 61.357 66.667 20.47 20.24 0.00 4.00
163 164 4.329545 GGCGCCAGTCACCTCCAA 62.330 66.667 24.80 0.00 0.00 3.53
164 165 3.050275 GCGCCAGTCACCTCCAAC 61.050 66.667 0.00 0.00 0.00 3.77
165 166 2.743718 CGCCAGTCACCTCCAACT 59.256 61.111 0.00 0.00 0.00 3.16
166 167 1.374758 CGCCAGTCACCTCCAACTC 60.375 63.158 0.00 0.00 0.00 3.01
167 168 1.003233 GCCAGTCACCTCCAACTCC 60.003 63.158 0.00 0.00 0.00 3.85
168 169 1.484444 GCCAGTCACCTCCAACTCCT 61.484 60.000 0.00 0.00 0.00 3.69
169 170 0.322975 CCAGTCACCTCCAACTCCTG 59.677 60.000 0.00 0.00 0.00 3.86
170 171 0.321122 CAGTCACCTCCAACTCCTGC 60.321 60.000 0.00 0.00 0.00 4.85
171 172 0.472734 AGTCACCTCCAACTCCTGCT 60.473 55.000 0.00 0.00 0.00 4.24
172 173 0.036858 GTCACCTCCAACTCCTGCTC 60.037 60.000 0.00 0.00 0.00 4.26
173 174 0.471780 TCACCTCCAACTCCTGCTCA 60.472 55.000 0.00 0.00 0.00 4.26
174 175 0.617413 CACCTCCAACTCCTGCTCAT 59.383 55.000 0.00 0.00 0.00 2.90
175 176 0.908198 ACCTCCAACTCCTGCTCATC 59.092 55.000 0.00 0.00 0.00 2.92
176 177 0.179936 CCTCCAACTCCTGCTCATCC 59.820 60.000 0.00 0.00 0.00 3.51
177 178 1.202330 CTCCAACTCCTGCTCATCCT 58.798 55.000 0.00 0.00 0.00 3.24
178 179 2.392662 CTCCAACTCCTGCTCATCCTA 58.607 52.381 0.00 0.00 0.00 2.94
179 180 2.364970 CTCCAACTCCTGCTCATCCTAG 59.635 54.545 0.00 0.00 0.00 3.02
180 181 2.023984 TCCAACTCCTGCTCATCCTAGA 60.024 50.000 0.00 0.00 0.00 2.43
181 182 2.102252 CCAACTCCTGCTCATCCTAGAC 59.898 54.545 0.00 0.00 0.00 2.59
182 183 1.686355 ACTCCTGCTCATCCTAGACG 58.314 55.000 0.00 0.00 0.00 4.18
183 184 0.313672 CTCCTGCTCATCCTAGACGC 59.686 60.000 0.00 0.00 0.00 5.19
184 185 1.109920 TCCTGCTCATCCTAGACGCC 61.110 60.000 0.00 0.00 0.00 5.68
185 186 1.007964 CTGCTCATCCTAGACGCCG 60.008 63.158 0.00 0.00 0.00 6.46
186 187 2.355244 GCTCATCCTAGACGCCGC 60.355 66.667 0.00 0.00 0.00 6.53
187 188 2.851071 GCTCATCCTAGACGCCGCT 61.851 63.158 0.00 0.00 0.00 5.52
188 189 1.516365 GCTCATCCTAGACGCCGCTA 61.516 60.000 0.00 0.00 0.00 4.26
189 190 0.519519 CTCATCCTAGACGCCGCTAG 59.480 60.000 8.11 8.11 38.05 3.42
199 200 4.874977 GCCGCTAGGTGCTCGTCC 62.875 72.222 0.00 0.00 40.50 4.79
200 201 4.208686 CCGCTAGGTGCTCGTCCC 62.209 72.222 0.00 0.00 40.11 4.46
201 202 4.208686 CGCTAGGTGCTCGTCCCC 62.209 72.222 0.00 0.00 40.11 4.81
202 203 4.208686 GCTAGGTGCTCGTCCCCG 62.209 72.222 0.00 0.00 38.95 5.73
203 204 4.208686 CTAGGTGCTCGTCCCCGC 62.209 72.222 0.00 0.00 0.00 6.13
207 208 4.373116 GTGCTCGTCCCCGCAGAA 62.373 66.667 0.00 0.00 36.73 3.02
208 209 4.373116 TGCTCGTCCCCGCAGAAC 62.373 66.667 0.00 0.00 0.00 3.01
210 211 3.382832 CTCGTCCCCGCAGAACCT 61.383 66.667 0.00 0.00 0.00 3.50
211 212 2.036098 TCGTCCCCGCAGAACCTA 59.964 61.111 0.00 0.00 0.00 3.08
212 213 2.005960 CTCGTCCCCGCAGAACCTAG 62.006 65.000 0.00 0.00 0.00 3.02
213 214 2.348888 CGTCCCCGCAGAACCTAGT 61.349 63.158 0.00 0.00 0.00 2.57
214 215 1.033746 CGTCCCCGCAGAACCTAGTA 61.034 60.000 0.00 0.00 0.00 1.82
215 216 1.188863 GTCCCCGCAGAACCTAGTAA 58.811 55.000 0.00 0.00 0.00 2.24
216 217 1.761198 GTCCCCGCAGAACCTAGTAAT 59.239 52.381 0.00 0.00 0.00 1.89
217 218 2.961062 GTCCCCGCAGAACCTAGTAATA 59.039 50.000 0.00 0.00 0.00 0.98
218 219 3.005578 GTCCCCGCAGAACCTAGTAATAG 59.994 52.174 0.00 0.00 0.00 1.73
219 220 2.299297 CCCCGCAGAACCTAGTAATAGG 59.701 54.545 14.67 14.67 42.86 2.57
220 221 2.288886 CCCGCAGAACCTAGTAATAGGC 60.289 54.545 16.11 1.05 40.90 3.93
221 222 2.607282 CCGCAGAACCTAGTAATAGGCG 60.607 54.545 16.11 12.49 40.90 5.52
222 223 2.405172 GCAGAACCTAGTAATAGGCGC 58.595 52.381 16.11 9.93 40.90 6.53
223 224 2.662700 CAGAACCTAGTAATAGGCGCG 58.337 52.381 16.11 0.00 40.90 6.86
224 225 1.612463 AGAACCTAGTAATAGGCGCGG 59.388 52.381 16.11 0.00 40.90 6.46
225 226 0.677842 AACCTAGTAATAGGCGCGGG 59.322 55.000 16.11 0.00 40.90 6.13
226 227 1.080025 CCTAGTAATAGGCGCGGGC 60.080 63.158 17.31 17.31 38.90 6.13
250 251 3.414700 CCGCGCTGACCAAGTGAC 61.415 66.667 5.56 0.00 38.83 3.67
251 252 3.414700 CGCGCTGACCAAGTGACC 61.415 66.667 5.56 0.00 38.83 4.02
252 253 2.280797 GCGCTGACCAAGTGACCA 60.281 61.111 0.00 0.00 38.83 4.02
253 254 2.320587 GCGCTGACCAAGTGACCAG 61.321 63.158 0.00 0.00 38.83 4.00
254 255 1.367471 CGCTGACCAAGTGACCAGA 59.633 57.895 0.00 0.00 38.83 3.86
255 256 0.946221 CGCTGACCAAGTGACCAGAC 60.946 60.000 0.00 0.00 38.83 3.51
256 257 0.603975 GCTGACCAAGTGACCAGACC 60.604 60.000 0.00 0.00 0.00 3.85
257 258 0.035458 CTGACCAAGTGACCAGACCC 59.965 60.000 0.00 0.00 0.00 4.46
258 259 0.692756 TGACCAAGTGACCAGACCCA 60.693 55.000 0.00 0.00 0.00 4.51
259 260 0.250338 GACCAAGTGACCAGACCCAC 60.250 60.000 0.00 0.00 0.00 4.61
260 261 0.694444 ACCAAGTGACCAGACCCACT 60.694 55.000 0.00 0.00 44.69 4.00
261 262 1.348064 CCAAGTGACCAGACCCACTA 58.652 55.000 0.00 0.00 42.25 2.74
262 263 1.276421 CCAAGTGACCAGACCCACTAG 59.724 57.143 0.00 0.00 42.25 2.57
263 264 1.276421 CAAGTGACCAGACCCACTAGG 59.724 57.143 0.00 0.00 42.25 3.02
272 273 4.162690 CCCACTAGGTCCGGCAGC 62.163 72.222 0.00 0.00 0.00 5.25
273 274 3.390521 CCACTAGGTCCGGCAGCA 61.391 66.667 0.00 0.00 0.00 4.41
274 275 2.185350 CACTAGGTCCGGCAGCAG 59.815 66.667 0.00 0.00 0.00 4.24
275 276 3.775654 ACTAGGTCCGGCAGCAGC 61.776 66.667 0.00 0.00 41.10 5.25
276 277 4.880537 CTAGGTCCGGCAGCAGCG 62.881 72.222 0.00 0.00 43.41 5.18
283 284 3.952675 CGGCAGCAGCGTGTTGTT 61.953 61.111 0.00 0.00 43.41 2.83
284 285 2.050985 GGCAGCAGCGTGTTGTTC 60.051 61.111 0.00 0.00 43.41 3.18
285 286 2.715005 GCAGCAGCGTGTTGTTCA 59.285 55.556 0.00 0.00 30.85 3.18
286 287 1.369689 GCAGCAGCGTGTTGTTCAG 60.370 57.895 0.00 0.00 30.85 3.02
287 288 1.775039 GCAGCAGCGTGTTGTTCAGA 61.775 55.000 0.00 0.00 30.85 3.27
288 289 0.870393 CAGCAGCGTGTTGTTCAGAT 59.130 50.000 0.00 0.00 0.00 2.90
289 290 1.136141 CAGCAGCGTGTTGTTCAGATC 60.136 52.381 0.00 0.00 0.00 2.75
290 291 0.166814 GCAGCGTGTTGTTCAGATCC 59.833 55.000 0.00 0.00 0.00 3.36
291 292 0.439985 CAGCGTGTTGTTCAGATCCG 59.560 55.000 0.00 0.00 0.00 4.18
292 293 1.132640 GCGTGTTGTTCAGATCCGC 59.867 57.895 0.00 0.00 32.55 5.54
293 294 1.291877 GCGTGTTGTTCAGATCCGCT 61.292 55.000 0.00 0.00 35.78 5.52
294 295 0.439985 CGTGTTGTTCAGATCCGCTG 59.560 55.000 0.00 0.00 46.31 5.18
295 296 0.166814 GTGTTGTTCAGATCCGCTGC 59.833 55.000 0.00 0.00 44.52 5.25
296 297 0.955428 TGTTGTTCAGATCCGCTGCC 60.955 55.000 0.00 0.00 44.52 4.85
297 298 1.741401 TTGTTCAGATCCGCTGCCG 60.741 57.895 0.00 0.00 44.52 5.69
298 299 3.567797 GTTCAGATCCGCTGCCGC 61.568 66.667 0.00 0.00 44.52 6.53
299 300 3.774528 TTCAGATCCGCTGCCGCT 61.775 61.111 0.00 0.00 44.52 5.52
300 301 3.723235 TTCAGATCCGCTGCCGCTC 62.723 63.158 0.00 0.00 44.52 5.03
333 334 4.176851 GACCTCCTCCGCGACGTC 62.177 72.222 8.23 5.18 0.00 4.34
335 336 3.518998 CCTCCTCCGCGACGTCAT 61.519 66.667 17.16 0.00 0.00 3.06
336 337 2.024871 CTCCTCCGCGACGTCATC 59.975 66.667 17.16 5.54 0.00 2.92
337 338 3.471244 CTCCTCCGCGACGTCATCC 62.471 68.421 17.16 2.01 0.00 3.51
338 339 3.822192 CCTCCGCGACGTCATCCA 61.822 66.667 17.16 0.00 0.00 3.41
339 340 2.579787 CTCCGCGACGTCATCCAC 60.580 66.667 17.16 0.00 0.00 4.02
348 349 4.208632 GTCATCCACGAGCCCTTG 57.791 61.111 0.00 0.00 0.00 3.61
349 350 1.596934 GTCATCCACGAGCCCTTGA 59.403 57.895 0.00 0.00 0.00 3.02
350 351 0.741221 GTCATCCACGAGCCCTTGAC 60.741 60.000 0.00 0.00 0.00 3.18
351 352 1.450312 CATCCACGAGCCCTTGACC 60.450 63.158 0.00 0.00 0.00 4.02
352 353 1.613630 ATCCACGAGCCCTTGACCT 60.614 57.895 0.00 0.00 0.00 3.85
353 354 1.617947 ATCCACGAGCCCTTGACCTC 61.618 60.000 0.00 0.00 0.00 3.85
356 357 3.382832 CGAGCCCTTGACCTCGGT 61.383 66.667 2.38 0.00 45.20 4.69
357 358 2.050350 CGAGCCCTTGACCTCGGTA 61.050 63.158 2.38 0.00 45.20 4.02
358 359 1.817209 GAGCCCTTGACCTCGGTAG 59.183 63.158 0.00 0.00 0.00 3.18
359 360 0.683504 GAGCCCTTGACCTCGGTAGA 60.684 60.000 0.00 0.00 0.00 2.59
360 361 0.684805 AGCCCTTGACCTCGGTAGAG 60.685 60.000 0.00 0.00 43.98 2.43
370 371 2.559785 TCGGTAGAGACGGACAACC 58.440 57.895 0.00 0.00 30.52 3.77
392 393 3.171911 CGGACGCCGCAAAAATGC 61.172 61.111 5.38 0.00 41.17 3.56
393 394 2.049618 GGACGCCGCAAAAATGCA 60.050 55.556 1.42 0.00 34.41 3.96
394 395 1.663074 GGACGCCGCAAAAATGCAA 60.663 52.632 0.00 0.00 34.41 4.08
395 396 1.013524 GGACGCCGCAAAAATGCAAT 61.014 50.000 0.00 0.00 34.41 3.56
396 397 0.789601 GACGCCGCAAAAATGCAATT 59.210 45.000 0.00 0.00 38.98 2.32
408 409 2.480224 ATGCAATTTGATCGCGAAGG 57.520 45.000 15.24 0.00 0.00 3.46
409 410 1.164411 TGCAATTTGATCGCGAAGGT 58.836 45.000 15.24 0.00 0.00 3.50
410 411 1.539388 TGCAATTTGATCGCGAAGGTT 59.461 42.857 15.24 0.00 0.00 3.50
411 412 2.177173 GCAATTTGATCGCGAAGGTTC 58.823 47.619 15.24 6.71 0.00 3.62
412 413 2.159517 GCAATTTGATCGCGAAGGTTCT 60.160 45.455 15.24 0.00 0.00 3.01
413 414 3.419915 CAATTTGATCGCGAAGGTTCTG 58.580 45.455 15.24 3.35 0.00 3.02
414 415 2.448926 TTTGATCGCGAAGGTTCTGA 57.551 45.000 15.24 0.00 0.00 3.27
415 416 2.672961 TTGATCGCGAAGGTTCTGAT 57.327 45.000 15.24 0.00 0.00 2.90
416 417 1.926561 TGATCGCGAAGGTTCTGATG 58.073 50.000 15.24 0.00 0.00 3.07
417 418 0.579156 GATCGCGAAGGTTCTGATGC 59.421 55.000 15.24 0.00 0.00 3.91
418 419 1.148157 ATCGCGAAGGTTCTGATGCG 61.148 55.000 15.24 0.00 46.27 4.73
419 420 4.185413 GCGAAGGTTCTGATGCGA 57.815 55.556 0.00 0.00 0.00 5.10
420 421 2.002127 GCGAAGGTTCTGATGCGAG 58.998 57.895 0.00 0.00 0.00 5.03
421 422 1.424493 GCGAAGGTTCTGATGCGAGG 61.424 60.000 0.00 0.00 0.00 4.63
422 423 0.807667 CGAAGGTTCTGATGCGAGGG 60.808 60.000 0.00 0.00 0.00 4.30
423 424 0.250513 GAAGGTTCTGATGCGAGGGT 59.749 55.000 0.00 0.00 0.00 4.34
424 425 0.693049 AAGGTTCTGATGCGAGGGTT 59.307 50.000 0.00 0.00 0.00 4.11
425 426 0.250513 AGGTTCTGATGCGAGGGTTC 59.749 55.000 0.00 0.00 0.00 3.62
427 428 1.084370 GTTCTGATGCGAGGGTTCGG 61.084 60.000 0.00 0.00 46.76 4.30
428 429 2.852495 TTCTGATGCGAGGGTTCGGC 62.852 60.000 0.00 0.00 46.76 5.54
429 430 3.376935 CTGATGCGAGGGTTCGGCT 62.377 63.158 0.00 0.00 46.76 5.52
430 431 2.892425 GATGCGAGGGTTCGGCTG 60.892 66.667 0.00 0.00 46.76 4.85
431 432 3.665675 GATGCGAGGGTTCGGCTGT 62.666 63.158 0.00 0.00 46.76 4.40
432 433 3.958147 ATGCGAGGGTTCGGCTGTG 62.958 63.158 0.00 0.00 46.76 3.66
434 435 3.691342 CGAGGGTTCGGCTGTGGA 61.691 66.667 0.00 0.00 43.05 4.02
435 436 2.266055 GAGGGTTCGGCTGTGGAG 59.734 66.667 0.00 0.00 0.00 3.86
436 437 3.316573 GAGGGTTCGGCTGTGGAGG 62.317 68.421 0.00 0.00 0.00 4.30
438 439 4.329545 GGTTCGGCTGTGGAGGCA 62.330 66.667 0.00 0.00 45.23 4.75
439 440 2.743928 GTTCGGCTGTGGAGGCAG 60.744 66.667 0.00 0.00 45.23 4.85
440 441 2.922503 TTCGGCTGTGGAGGCAGA 60.923 61.111 0.00 0.00 45.23 4.26
441 442 2.947532 TTCGGCTGTGGAGGCAGAG 61.948 63.158 0.00 0.00 45.23 3.35
442 443 3.385384 CGGCTGTGGAGGCAGAGA 61.385 66.667 0.00 0.00 45.23 3.10
443 444 2.947532 CGGCTGTGGAGGCAGAGAA 61.948 63.158 0.00 0.00 45.23 2.87
444 445 1.376466 GGCTGTGGAGGCAGAGAAA 59.624 57.895 0.00 0.00 44.34 2.52
445 446 0.034670 GGCTGTGGAGGCAGAGAAAT 60.035 55.000 0.00 0.00 44.34 2.17
446 447 1.093159 GCTGTGGAGGCAGAGAAATG 58.907 55.000 0.00 0.00 38.70 2.32
447 448 1.339438 GCTGTGGAGGCAGAGAAATGA 60.339 52.381 0.00 0.00 38.70 2.57
448 449 2.630158 CTGTGGAGGCAGAGAAATGAG 58.370 52.381 0.00 0.00 38.70 2.90
449 450 1.280133 TGTGGAGGCAGAGAAATGAGG 59.720 52.381 0.00 0.00 0.00 3.86
450 451 1.556911 GTGGAGGCAGAGAAATGAGGA 59.443 52.381 0.00 0.00 0.00 3.71
451 452 1.836166 TGGAGGCAGAGAAATGAGGAG 59.164 52.381 0.00 0.00 0.00 3.69
452 453 1.836802 GGAGGCAGAGAAATGAGGAGT 59.163 52.381 0.00 0.00 0.00 3.85
453 454 2.419851 GGAGGCAGAGAAATGAGGAGTG 60.420 54.545 0.00 0.00 0.00 3.51
454 455 1.065564 AGGCAGAGAAATGAGGAGTGC 60.066 52.381 0.00 0.00 0.00 4.40
455 456 1.377536 GCAGAGAAATGAGGAGTGCC 58.622 55.000 0.00 0.00 0.00 5.01
456 457 1.339438 GCAGAGAAATGAGGAGTGCCA 60.339 52.381 0.00 0.00 36.29 4.92
457 458 2.683152 GCAGAGAAATGAGGAGTGCCAT 60.683 50.000 0.00 0.00 36.29 4.40
458 459 3.432749 GCAGAGAAATGAGGAGTGCCATA 60.433 47.826 0.00 0.00 36.29 2.74
459 460 4.746089 GCAGAGAAATGAGGAGTGCCATAT 60.746 45.833 0.00 0.00 36.29 1.78
460 461 5.374921 CAGAGAAATGAGGAGTGCCATATT 58.625 41.667 0.00 0.00 36.29 1.28
461 462 5.238868 CAGAGAAATGAGGAGTGCCATATTG 59.761 44.000 0.00 0.00 36.29 1.90
462 463 5.104193 AGAGAAATGAGGAGTGCCATATTGT 60.104 40.000 0.00 0.00 36.29 2.71
463 464 4.885907 AGAAATGAGGAGTGCCATATTGTG 59.114 41.667 0.00 0.00 36.29 3.33
479 480 8.839310 CCATATTGTGGGTCAAAATTTGTAAA 57.161 30.769 5.56 0.00 44.79 2.01
480 481 8.934825 CCATATTGTGGGTCAAAATTTGTAAAG 58.065 33.333 5.56 0.00 44.79 1.85
481 482 9.487790 CATATTGTGGGTCAAAATTTGTAAAGT 57.512 29.630 5.56 0.00 39.62 2.66
482 483 9.705290 ATATTGTGGGTCAAAATTTGTAAAGTC 57.295 29.630 5.56 0.00 39.62 3.01
483 484 6.783708 TGTGGGTCAAAATTTGTAAAGTCT 57.216 33.333 5.56 0.00 0.00 3.24
484 485 6.568869 TGTGGGTCAAAATTTGTAAAGTCTG 58.431 36.000 5.56 0.00 0.00 3.51
485 486 5.983118 GTGGGTCAAAATTTGTAAAGTCTGG 59.017 40.000 5.56 0.00 0.00 3.86
486 487 5.659079 TGGGTCAAAATTTGTAAAGTCTGGT 59.341 36.000 5.56 0.00 0.00 4.00
487 488 6.155393 TGGGTCAAAATTTGTAAAGTCTGGTT 59.845 34.615 5.56 0.00 0.00 3.67
488 489 6.478673 GGGTCAAAATTTGTAAAGTCTGGTTG 59.521 38.462 5.56 0.00 0.00 3.77
489 490 6.019075 GGTCAAAATTTGTAAAGTCTGGTTGC 60.019 38.462 5.56 0.00 0.00 4.17
490 491 6.533367 GTCAAAATTTGTAAAGTCTGGTTGCA 59.467 34.615 5.56 0.00 0.00 4.08
491 492 6.756074 TCAAAATTTGTAAAGTCTGGTTGCAG 59.244 34.615 5.56 0.00 0.00 4.41
492 493 6.463995 AAATTTGTAAAGTCTGGTTGCAGA 57.536 33.333 0.00 0.00 0.00 4.26
493 494 6.655078 AATTTGTAAAGTCTGGTTGCAGAT 57.345 33.333 0.00 0.00 33.34 2.90
494 495 5.437289 TTTGTAAAGTCTGGTTGCAGATG 57.563 39.130 0.00 0.00 33.34 2.90
495 496 2.813754 TGTAAAGTCTGGTTGCAGATGC 59.186 45.455 0.00 0.00 42.50 3.91
496 497 2.283145 AAAGTCTGGTTGCAGATGCT 57.717 45.000 6.35 0.00 42.66 3.79
497 498 1.818642 AAGTCTGGTTGCAGATGCTC 58.181 50.000 6.35 0.00 42.66 4.26
498 499 0.982704 AGTCTGGTTGCAGATGCTCT 59.017 50.000 6.35 0.00 42.66 4.09
630 643 0.395311 TCGCGGTGACTAGGATCCTT 60.395 55.000 22.03 1.57 0.00 3.36
631 644 0.030908 CGCGGTGACTAGGATCCTTC 59.969 60.000 22.03 13.25 0.00 3.46
633 646 1.067821 GCGGTGACTAGGATCCTTCAG 59.932 57.143 22.03 14.97 0.00 3.02
635 648 2.359531 CGGTGACTAGGATCCTTCAGAC 59.640 54.545 22.03 13.00 0.00 3.51
636 649 3.366396 GGTGACTAGGATCCTTCAGACA 58.634 50.000 22.03 15.55 0.00 3.41
637 650 3.769844 GGTGACTAGGATCCTTCAGACAA 59.230 47.826 22.03 0.00 0.00 3.18
704 717 2.095668 GTGGCAGAGTCGTAGATATCCG 60.096 54.545 0.00 0.00 40.67 4.18
715 729 1.030457 AGATATCCGGAAGAACGCGT 58.970 50.000 9.01 5.58 0.00 6.01
782 796 2.677875 CCAGCCAGCCACCTTTCC 60.678 66.667 0.00 0.00 0.00 3.13
784 798 1.228675 CAGCCAGCCACCTTTCCTT 60.229 57.895 0.00 0.00 0.00 3.36
785 799 1.075659 AGCCAGCCACCTTTCCTTC 59.924 57.895 0.00 0.00 0.00 3.46
786 800 2.335712 GCCAGCCACCTTTCCTTCG 61.336 63.158 0.00 0.00 0.00 3.79
855 874 0.877743 AAGAGCTTTTTCTCCAGCGC 59.122 50.000 0.00 0.00 41.24 5.92
940 965 1.984570 CCAGACTCCTCCTCCGCAA 60.985 63.158 0.00 0.00 0.00 4.85
969 1002 3.695825 TCCCTCCCCCACTCTCCC 61.696 72.222 0.00 0.00 0.00 4.30
1195 1252 4.276183 CCTCGATCGATCTCCTCTTGTTAA 59.724 45.833 19.78 0.00 0.00 2.01
1196 1253 5.171147 TCGATCGATCTCCTCTTGTTAAC 57.829 43.478 22.43 0.00 0.00 2.01
1197 1254 3.969352 CGATCGATCTCCTCTTGTTAACG 59.031 47.826 22.43 1.58 0.00 3.18
1198 1255 4.496010 CGATCGATCTCCTCTTGTTAACGT 60.496 45.833 22.43 0.00 0.00 3.99
1247 1312 0.810016 TGTGGCGCGTACATAGTACA 59.190 50.000 8.43 0.00 0.00 2.90
1277 1342 1.965643 GATGGTTATGGCATGGCATGT 59.034 47.619 37.19 20.88 0.00 3.21
1278 1343 1.863325 TGGTTATGGCATGGCATGTT 58.137 45.000 37.19 20.18 0.00 2.71
1279 1344 2.186243 TGGTTATGGCATGGCATGTTT 58.814 42.857 37.19 19.83 0.00 2.83
1280 1345 2.093606 TGGTTATGGCATGGCATGTTTG 60.094 45.455 37.19 5.35 0.00 2.93
1308 1378 3.115554 CTGATGATCATACGCGACACAA 58.884 45.455 15.93 0.00 0.00 3.33
1354 1425 2.294979 TGAGATGGTGCTTGCATGATC 58.705 47.619 3.33 3.97 0.00 2.92
1362 1433 1.452651 CTTGCATGATCCCTGCCGT 60.453 57.895 13.13 0.00 38.89 5.68
1363 1434 1.721664 CTTGCATGATCCCTGCCGTG 61.722 60.000 13.13 2.40 38.89 4.94
1364 1435 2.124570 GCATGATCCCTGCCGTGT 60.125 61.111 0.00 0.00 33.44 4.49
1365 1436 2.475466 GCATGATCCCTGCCGTGTG 61.475 63.158 0.00 0.00 33.44 3.82
1366 1437 2.124570 ATGATCCCTGCCGTGTGC 60.125 61.111 0.00 0.00 41.77 4.57
1367 1438 3.704231 ATGATCCCTGCCGTGTGCC 62.704 63.158 0.00 0.00 40.16 5.01
1382 1453 4.331717 CCGTGTGCCGACTAGAATTAATTT 59.668 41.667 1.43 0.00 39.56 1.82
1385 1456 7.254658 CCGTGTGCCGACTAGAATTAATTTAAT 60.255 37.037 1.43 0.00 39.56 1.40
1405 1476 2.360350 CCTGCGGCTTGTGGATGT 60.360 61.111 0.00 0.00 0.00 3.06
1471 1569 7.596494 TGCTTAACATCCTTGAGAAAGAAATG 58.404 34.615 0.00 0.00 0.00 2.32
1513 1611 5.395546 GCTGAAAGATTCCCATATGCCAAAA 60.396 40.000 0.00 0.00 34.07 2.44
1529 1627 3.317993 GCCAAAATTAGGAGTGTGTGTGT 59.682 43.478 1.21 0.00 0.00 3.72
1530 1628 4.792704 GCCAAAATTAGGAGTGTGTGTGTG 60.793 45.833 1.21 0.00 0.00 3.82
1625 1723 1.000731 TGGCTTTTTCAATTCGGCCAG 59.999 47.619 2.24 0.00 43.62 4.85
1702 1800 6.395426 TTTGTCAAACATCTGAATTCTGCT 57.605 33.333 7.05 0.00 0.00 4.24
1716 1814 7.013750 TCTGAATTCTGCTACAGTCTACCATAG 59.986 40.741 7.05 0.00 32.61 2.23
1729 1827 4.219944 GTCTACCATAGTCAAGTGTCACCA 59.780 45.833 0.00 0.00 0.00 4.17
1732 1830 4.787551 ACCATAGTCAAGTGTCACCAAAA 58.212 39.130 0.00 0.00 0.00 2.44
1733 1831 4.578928 ACCATAGTCAAGTGTCACCAAAAC 59.421 41.667 0.00 0.00 0.00 2.43
1734 1832 4.821805 CCATAGTCAAGTGTCACCAAAACT 59.178 41.667 0.00 1.68 0.00 2.66
1735 1833 5.299279 CCATAGTCAAGTGTCACCAAAACTT 59.701 40.000 0.00 0.00 34.52 2.66
1736 1834 4.965119 AGTCAAGTGTCACCAAAACTTC 57.035 40.909 0.00 0.00 31.88 3.01
1737 1835 4.589908 AGTCAAGTGTCACCAAAACTTCT 58.410 39.130 0.00 0.00 31.88 2.85
1738 1836 4.396166 AGTCAAGTGTCACCAAAACTTCTG 59.604 41.667 0.00 0.00 31.88 3.02
1739 1837 3.694072 TCAAGTGTCACCAAAACTTCTGG 59.306 43.478 0.00 0.00 40.05 3.86
1740 1838 2.024414 AGTGTCACCAAAACTTCTGGC 58.976 47.619 0.00 0.00 37.48 4.85
1741 1839 2.024414 GTGTCACCAAAACTTCTGGCT 58.976 47.619 0.00 0.00 37.48 4.75
1742 1840 2.023673 TGTCACCAAAACTTCTGGCTG 58.976 47.619 0.00 0.00 37.48 4.85
1744 1842 2.687935 GTCACCAAAACTTCTGGCTGAA 59.312 45.455 6.64 6.64 37.48 3.02
1745 1843 3.130340 GTCACCAAAACTTCTGGCTGAAA 59.870 43.478 8.22 0.00 37.48 2.69
1746 1844 3.960102 TCACCAAAACTTCTGGCTGAAAT 59.040 39.130 8.22 0.00 37.48 2.17
1747 1845 4.405358 TCACCAAAACTTCTGGCTGAAATT 59.595 37.500 8.22 1.61 37.48 1.82
1748 1846 4.746611 CACCAAAACTTCTGGCTGAAATTC 59.253 41.667 8.22 0.00 37.48 2.17
1750 1848 5.104982 ACCAAAACTTCTGGCTGAAATTCAA 60.105 36.000 8.22 0.00 37.48 2.69
1751 1849 5.234972 CCAAAACTTCTGGCTGAAATTCAAC 59.765 40.000 8.22 0.00 33.79 3.18
1753 1851 6.959639 AAACTTCTGGCTGAAATTCAACTA 57.040 33.333 8.22 0.00 33.79 2.24
1754 1852 6.959639 AACTTCTGGCTGAAATTCAACTAA 57.040 33.333 8.22 0.00 33.79 2.24
1757 1855 5.947228 TCTGGCTGAAATTCAACTAACAG 57.053 39.130 0.00 2.15 0.00 3.16
1758 1856 5.376625 TCTGGCTGAAATTCAACTAACAGT 58.623 37.500 0.00 0.00 0.00 3.55
1759 1857 5.827797 TCTGGCTGAAATTCAACTAACAGTT 59.172 36.000 0.00 0.00 39.39 3.16
1762 1860 6.016610 TGGCTGAAATTCAACTAACAGTTACC 60.017 38.462 0.00 0.00 36.03 2.85
1763 1861 6.016610 GGCTGAAATTCAACTAACAGTTACCA 60.017 38.462 0.00 0.00 36.03 3.25
1764 1862 7.422399 GCTGAAATTCAACTAACAGTTACCAA 58.578 34.615 0.00 0.00 36.03 3.67
1772 1870 9.575783 TTCAACTAACAGTTACCAAAATTTGAC 57.424 29.630 7.37 0.00 36.03 3.18
1774 1872 9.360093 CAACTAACAGTTACCAAAATTTGACAA 57.640 29.630 7.37 0.00 36.03 3.18
1775 1873 9.930693 AACTAACAGTTACCAAAATTTGACAAA 57.069 25.926 7.37 2.48 36.52 2.83
1776 1874 9.361315 ACTAACAGTTACCAAAATTTGACAAAC 57.639 29.630 7.37 8.17 0.00 2.93
1777 1875 9.360093 CTAACAGTTACCAAAATTTGACAAACA 57.640 29.630 7.37 0.00 0.00 2.83
1778 1876 7.826260 ACAGTTACCAAAATTTGACAAACAG 57.174 32.000 7.37 7.68 0.00 3.16
1779 1877 7.382898 ACAGTTACCAAAATTTGACAAACAGT 58.617 30.769 7.37 8.22 0.00 3.55
1780 1878 7.875554 ACAGTTACCAAAATTTGACAAACAGTT 59.124 29.630 7.37 0.00 0.00 3.16
1781 1879 8.167985 CAGTTACCAAAATTTGACAAACAGTTG 58.832 33.333 7.37 7.72 40.84 3.16
1782 1880 8.091449 AGTTACCAAAATTTGACAAACAGTTGA 58.909 29.630 7.37 1.82 38.20 3.18
1783 1881 8.713271 GTTACCAAAATTTGACAAACAGTTGAA 58.287 29.630 7.37 6.14 38.20 2.69
1784 1882 7.920160 ACCAAAATTTGACAAACAGTTGAAT 57.080 28.000 7.37 6.41 38.20 2.57
1785 1883 8.334263 ACCAAAATTTGACAAACAGTTGAATT 57.666 26.923 7.37 0.00 38.20 2.17
1786 1884 9.442047 ACCAAAATTTGACAAACAGTTGAATTA 57.558 25.926 7.37 0.00 38.20 1.40
1789 1887 9.934190 AAAATTTGACAAACAGTTGAATTATGC 57.066 25.926 1.94 0.00 38.20 3.14
1790 1888 8.891671 AATTTGACAAACAGTTGAATTATGCT 57.108 26.923 1.94 0.00 38.20 3.79
1791 1889 8.891671 ATTTGACAAACAGTTGAATTATGCTT 57.108 26.923 1.94 0.00 38.20 3.91
1792 1890 7.928908 TTGACAAACAGTTGAATTATGCTTC 57.071 32.000 0.00 0.00 38.20 3.86
1793 1891 7.036996 TGACAAACAGTTGAATTATGCTTCA 57.963 32.000 0.00 0.00 38.20 3.02
1794 1892 7.487484 TGACAAACAGTTGAATTATGCTTCAA 58.513 30.769 0.00 0.00 41.56 2.69
1811 1909 7.701539 TGCTTCAACATTCCATTATAACTGT 57.298 32.000 0.00 0.00 0.00 3.55
1812 1910 7.761409 TGCTTCAACATTCCATTATAACTGTC 58.239 34.615 0.00 0.00 0.00 3.51
1813 1911 7.392953 TGCTTCAACATTCCATTATAACTGTCA 59.607 33.333 0.00 0.00 0.00 3.58
1814 1912 7.698130 GCTTCAACATTCCATTATAACTGTCAC 59.302 37.037 0.00 0.00 0.00 3.67
1815 1913 7.624360 TCAACATTCCATTATAACTGTCACC 57.376 36.000 0.00 0.00 0.00 4.02
1816 1914 6.315144 TCAACATTCCATTATAACTGTCACCG 59.685 38.462 0.00 0.00 0.00 4.94
1817 1915 5.984725 ACATTCCATTATAACTGTCACCGA 58.015 37.500 0.00 0.00 0.00 4.69
1818 1916 5.815740 ACATTCCATTATAACTGTCACCGAC 59.184 40.000 0.00 0.00 0.00 4.79
1819 1917 4.395959 TCCATTATAACTGTCACCGACC 57.604 45.455 0.00 0.00 0.00 4.79
1820 1918 3.120792 CCATTATAACTGTCACCGACCG 58.879 50.000 0.00 0.00 0.00 4.79
1821 1919 3.181484 CCATTATAACTGTCACCGACCGA 60.181 47.826 0.00 0.00 0.00 4.69
1822 1920 3.770263 TTATAACTGTCACCGACCGAG 57.230 47.619 0.00 0.00 0.00 4.63
1823 1921 0.815734 ATAACTGTCACCGACCGAGG 59.184 55.000 0.00 0.00 37.30 4.63
1824 1922 0.250858 TAACTGTCACCGACCGAGGA 60.251 55.000 0.00 0.00 34.73 3.71
1825 1923 1.803366 AACTGTCACCGACCGAGGAC 61.803 60.000 0.00 6.51 34.73 3.85
1826 1924 1.972223 CTGTCACCGACCGAGGACT 60.972 63.158 0.00 0.00 34.73 3.85
1827 1925 1.524863 CTGTCACCGACCGAGGACTT 61.525 60.000 0.00 0.00 34.73 3.01
1828 1926 1.080705 GTCACCGACCGAGGACTTG 60.081 63.158 0.00 0.00 34.73 3.16
1829 1927 1.228337 TCACCGACCGAGGACTTGA 60.228 57.895 0.00 0.00 34.73 3.02
1831 1929 2.182030 CCGACCGAGGACTTGAGC 59.818 66.667 0.00 0.00 0.00 4.26
1836 1934 1.294780 CCGAGGACTTGAGCTTGCT 59.705 57.895 0.00 0.00 0.00 3.91
1838 1936 1.517242 CGAGGACTTGAGCTTGCTTT 58.483 50.000 0.00 0.00 0.00 3.51
1840 1938 2.096019 CGAGGACTTGAGCTTGCTTTTC 60.096 50.000 0.00 0.00 0.00 2.29
1841 1939 3.145286 GAGGACTTGAGCTTGCTTTTCT 58.855 45.455 0.00 0.00 0.00 2.52
1845 1943 4.517075 GGACTTGAGCTTGCTTTTCTTAGT 59.483 41.667 0.00 0.00 0.00 2.24
1852 1950 7.091443 TGAGCTTGCTTTTCTTAGTAGTACTC 58.909 38.462 5.96 0.00 0.00 2.59
1878 1976 8.491152 CCTAGAAGATGCAAACGAATAATACAG 58.509 37.037 0.00 0.00 0.00 2.74
1894 1992 5.434352 AATACAGCTTTGCTATGCATGAG 57.566 39.130 10.16 4.20 38.76 2.90
2071 2170 0.452184 AATCGAGTCGCAGTCGTCAT 59.548 50.000 7.92 0.00 41.51 3.06
2153 2253 8.912988 TGATTGTGTTTAGAAGAAGAATGGTTT 58.087 29.630 0.00 0.00 0.00 3.27
2166 2266 3.003275 AGAATGGTTTACTGTTGTGTGCG 59.997 43.478 0.00 0.00 0.00 5.34
2197 2297 4.258702 AGTACTAAACTGCACACTGAGG 57.741 45.455 0.00 0.00 36.93 3.86
2206 2306 0.450583 GCACACTGAGGCACATGATG 59.549 55.000 0.00 0.00 0.00 3.07
2327 2479 3.261643 TGAGTATCAAAGAGAGCCAAGCA 59.738 43.478 0.00 0.00 45.97 3.91
2455 2607 2.485426 ACATCAAGAAACACGAGCCATG 59.515 45.455 0.00 0.00 0.00 3.66
2489 2644 3.755378 CCCTTCTGTTCTTCATTCACTGG 59.245 47.826 0.00 0.00 0.00 4.00
2764 2922 3.403057 CAGTTCACGACGGCGGTG 61.403 66.667 18.49 11.58 43.17 4.94
3251 3417 3.106672 GCGTCAGTCGGTAATAACTCTG 58.893 50.000 0.00 0.00 40.26 3.35
3260 3426 3.114065 GGTAATAACTCTGCGTCTTCGG 58.886 50.000 0.00 0.00 37.56 4.30
3269 3435 2.494918 CGTCTTCGGGGTGCCTAG 59.505 66.667 0.00 0.00 0.00 3.02
3314 3480 7.069085 TTCTACCCAGAGTACATGTAATGGTAC 59.931 40.741 22.22 8.61 39.58 3.34
3383 3556 6.311935 GCTTCATTTACAGATTACACACGGTA 59.688 38.462 0.00 0.00 0.00 4.02
3394 3567 1.487558 ACACACGGTACACTTCCCTTT 59.512 47.619 0.00 0.00 0.00 3.11
3486 3659 2.185350 CTCGCGCTCCCTGTCATT 59.815 61.111 5.56 0.00 0.00 2.57
4044 4217 1.455402 TTGCCAGCCTGAACAGCAA 60.455 52.632 2.52 2.52 40.89 3.91
4048 4221 1.457823 CCAGCCTGAACAGCAAAGCA 61.458 55.000 0.00 0.00 0.00 3.91
4087 4271 2.125310 CCTGCGGCGTCACCATTA 60.125 61.111 9.37 0.00 39.03 1.90
4090 4274 0.530650 CTGCGGCGTCACCATTATCT 60.531 55.000 9.37 0.00 39.03 1.98
4091 4275 0.107897 TGCGGCGTCACCATTATCTT 60.108 50.000 9.37 0.00 39.03 2.40
4097 4281 3.214328 GCGTCACCATTATCTTGGGAAT 58.786 45.455 0.00 0.00 41.35 3.01
4102 4286 6.464222 GTCACCATTATCTTGGGAATCGATA 58.536 40.000 0.00 0.00 41.35 2.92
4125 4309 5.611374 AGAGCACGCCATAATAAATACACT 58.389 37.500 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.228343 GTGATACGTAGGGCGAGCTATT 59.772 50.000 0.08 0.00 44.77 1.73
6 7 1.811359 GTGATACGTAGGGCGAGCTAT 59.189 52.381 0.08 0.00 44.77 2.97
7 8 1.233019 GTGATACGTAGGGCGAGCTA 58.767 55.000 0.08 0.00 44.77 3.32
8 9 1.453762 GGTGATACGTAGGGCGAGCT 61.454 60.000 0.08 0.00 44.77 4.09
9 10 1.007618 GGTGATACGTAGGGCGAGC 60.008 63.158 0.08 0.00 44.77 5.03
10 11 1.281960 CGGTGATACGTAGGGCGAG 59.718 63.158 0.08 0.00 44.77 5.03
11 12 1.451927 ACGGTGATACGTAGGGCGA 60.452 57.895 0.08 0.00 46.58 5.54
12 13 3.113745 ACGGTGATACGTAGGGCG 58.886 61.111 0.08 0.00 46.58 6.13
35 36 0.038159 CTTATCCATCGGCGAGGACC 60.038 60.000 24.40 0.00 36.60 4.46
36 37 0.038159 CCTTATCCATCGGCGAGGAC 60.038 60.000 24.40 0.00 36.60 3.85
37 38 1.185618 CCCTTATCCATCGGCGAGGA 61.186 60.000 24.40 23.91 38.50 3.71
38 39 1.293498 CCCTTATCCATCGGCGAGG 59.707 63.158 17.22 16.35 0.00 4.63
39 40 1.293498 CCCCTTATCCATCGGCGAG 59.707 63.158 17.22 7.56 0.00 5.03
40 41 2.879233 GCCCCTTATCCATCGGCGA 61.879 63.158 13.87 13.87 0.00 5.54
41 42 2.358737 GCCCCTTATCCATCGGCG 60.359 66.667 0.00 0.00 0.00 6.46
42 43 2.358737 CGCCCCTTATCCATCGGC 60.359 66.667 0.00 0.00 36.21 5.54
43 44 1.301716 CACGCCCCTTATCCATCGG 60.302 63.158 0.00 0.00 0.00 4.18
44 45 1.961277 GCACGCCCCTTATCCATCG 60.961 63.158 0.00 0.00 0.00 3.84
45 46 1.961277 CGCACGCCCCTTATCCATC 60.961 63.158 0.00 0.00 0.00 3.51
46 47 2.111043 CGCACGCCCCTTATCCAT 59.889 61.111 0.00 0.00 0.00 3.41
47 48 4.849310 GCGCACGCCCCTTATCCA 62.849 66.667 0.30 0.00 34.56 3.41
48 49 4.547367 AGCGCACGCCCCTTATCC 62.547 66.667 11.47 0.00 43.17 2.59
49 50 2.967615 GAGCGCACGCCCCTTATC 60.968 66.667 11.47 0.00 43.17 1.75
50 51 4.891727 CGAGCGCACGCCCCTTAT 62.892 66.667 15.46 0.00 43.17 1.73
70 71 2.765807 ATCGGGGAGGGCACAGAG 60.766 66.667 0.00 0.00 0.00 3.35
71 72 3.083349 CATCGGGGAGGGCACAGA 61.083 66.667 0.00 0.00 0.00 3.41
72 73 4.181010 CCATCGGGGAGGGCACAG 62.181 72.222 0.00 0.00 40.01 3.66
79 80 3.554342 CTCCAGGCCATCGGGGAG 61.554 72.222 5.01 9.25 40.82 4.30
112 113 4.560856 CTCTTCGAGGAGGGCGCG 62.561 72.222 16.39 0.00 0.00 6.86
122 123 1.289066 CCACTCGTTGCCTCTTCGA 59.711 57.895 0.00 0.00 0.00 3.71
123 124 2.383527 GCCACTCGTTGCCTCTTCG 61.384 63.158 0.00 0.00 0.00 3.79
124 125 2.035442 GGCCACTCGTTGCCTCTTC 61.035 63.158 0.00 0.00 44.46 2.87
125 126 2.032681 GGCCACTCGTTGCCTCTT 59.967 61.111 0.00 0.00 44.46 2.85
130 131 3.357079 CCACTGGCCACTCGTTGC 61.357 66.667 0.00 0.00 0.00 4.17
131 132 3.357079 GCCACTGGCCACTCGTTG 61.357 66.667 9.13 0.00 44.06 4.10
147 148 3.050275 GTTGGAGGTGACTGGCGC 61.050 66.667 0.00 0.00 44.43 6.53
148 149 1.374758 GAGTTGGAGGTGACTGGCG 60.375 63.158 0.00 0.00 44.43 5.69
149 150 1.003233 GGAGTTGGAGGTGACTGGC 60.003 63.158 0.00 0.00 44.43 4.85
150 151 0.322975 CAGGAGTTGGAGGTGACTGG 59.677 60.000 0.00 0.00 44.43 4.00
151 152 0.321122 GCAGGAGTTGGAGGTGACTG 60.321 60.000 0.00 0.00 44.43 3.51
153 154 0.036858 GAGCAGGAGTTGGAGGTGAC 60.037 60.000 0.00 0.00 0.00 3.67
154 155 0.471780 TGAGCAGGAGTTGGAGGTGA 60.472 55.000 0.00 0.00 0.00 4.02
155 156 0.617413 ATGAGCAGGAGTTGGAGGTG 59.383 55.000 0.00 0.00 0.00 4.00
156 157 0.908198 GATGAGCAGGAGTTGGAGGT 59.092 55.000 0.00 0.00 0.00 3.85
157 158 0.179936 GGATGAGCAGGAGTTGGAGG 59.820 60.000 0.00 0.00 0.00 4.30
158 159 1.202330 AGGATGAGCAGGAGTTGGAG 58.798 55.000 0.00 0.00 0.00 3.86
159 160 2.023984 TCTAGGATGAGCAGGAGTTGGA 60.024 50.000 0.00 0.00 0.00 3.53
160 161 2.102252 GTCTAGGATGAGCAGGAGTTGG 59.898 54.545 0.00 0.00 0.00 3.77
161 162 2.223688 CGTCTAGGATGAGCAGGAGTTG 60.224 54.545 0.00 0.00 0.00 3.16
162 163 2.028130 CGTCTAGGATGAGCAGGAGTT 58.972 52.381 0.00 0.00 0.00 3.01
163 164 1.686355 CGTCTAGGATGAGCAGGAGT 58.314 55.000 0.00 0.00 0.00 3.85
164 165 0.313672 GCGTCTAGGATGAGCAGGAG 59.686 60.000 0.00 0.00 0.00 3.69
165 166 1.109920 GGCGTCTAGGATGAGCAGGA 61.110 60.000 0.00 0.00 0.00 3.86
166 167 1.365633 GGCGTCTAGGATGAGCAGG 59.634 63.158 0.00 0.00 0.00 4.85
167 168 1.007964 CGGCGTCTAGGATGAGCAG 60.008 63.158 0.00 0.00 0.00 4.24
168 169 3.120105 CGGCGTCTAGGATGAGCA 58.880 61.111 0.00 0.00 0.00 4.26
169 170 1.516365 TAGCGGCGTCTAGGATGAGC 61.516 60.000 9.37 0.00 0.00 4.26
170 171 0.519519 CTAGCGGCGTCTAGGATGAG 59.480 60.000 22.31 6.39 33.98 2.90
171 172 2.630214 CTAGCGGCGTCTAGGATGA 58.370 57.895 22.31 1.37 33.98 2.92
176 177 2.026301 GCACCTAGCGGCGTCTAG 59.974 66.667 22.79 22.79 36.63 2.43
196 197 1.188863 TTACTAGGTTCTGCGGGGAC 58.811 55.000 0.00 0.00 0.00 4.46
197 198 2.170012 ATTACTAGGTTCTGCGGGGA 57.830 50.000 0.00 0.00 0.00 4.81
198 199 2.299297 CCTATTACTAGGTTCTGCGGGG 59.701 54.545 0.00 0.00 39.89 5.73
199 200 2.288886 GCCTATTACTAGGTTCTGCGGG 60.289 54.545 7.89 0.00 45.62 6.13
200 201 2.607282 CGCCTATTACTAGGTTCTGCGG 60.607 54.545 7.89 0.00 45.62 5.69
201 202 2.662700 CGCCTATTACTAGGTTCTGCG 58.337 52.381 7.89 1.53 45.62 5.18
202 203 2.405172 GCGCCTATTACTAGGTTCTGC 58.595 52.381 7.89 4.19 45.62 4.26
203 204 2.607282 CCGCGCCTATTACTAGGTTCTG 60.607 54.545 0.00 0.00 45.62 3.02
204 205 1.612463 CCGCGCCTATTACTAGGTTCT 59.388 52.381 0.00 0.00 45.62 3.01
205 206 1.336609 CCCGCGCCTATTACTAGGTTC 60.337 57.143 0.00 0.23 45.62 3.62
206 207 0.677842 CCCGCGCCTATTACTAGGTT 59.322 55.000 0.00 0.00 45.62 3.50
207 208 1.813728 GCCCGCGCCTATTACTAGGT 61.814 60.000 0.00 0.00 45.62 3.08
208 209 1.080025 GCCCGCGCCTATTACTAGG 60.080 63.158 0.00 1.73 46.48 3.02
209 210 4.573162 GCCCGCGCCTATTACTAG 57.427 61.111 0.00 0.00 0.00 2.57
233 234 3.414700 GTCACTTGGTCAGCGCGG 61.415 66.667 8.83 0.00 0.00 6.46
234 235 3.414700 GGTCACTTGGTCAGCGCG 61.415 66.667 0.00 0.00 0.00 6.86
235 236 2.280797 TGGTCACTTGGTCAGCGC 60.281 61.111 0.00 0.00 0.00 5.92
236 237 0.946221 GTCTGGTCACTTGGTCAGCG 60.946 60.000 0.00 0.00 0.00 5.18
237 238 0.603975 GGTCTGGTCACTTGGTCAGC 60.604 60.000 0.00 0.00 0.00 4.26
238 239 0.035458 GGGTCTGGTCACTTGGTCAG 59.965 60.000 0.00 0.00 0.00 3.51
239 240 0.692756 TGGGTCTGGTCACTTGGTCA 60.693 55.000 0.00 0.00 0.00 4.02
240 241 0.250338 GTGGGTCTGGTCACTTGGTC 60.250 60.000 0.00 0.00 0.00 4.02
241 242 0.694444 AGTGGGTCTGGTCACTTGGT 60.694 55.000 0.00 0.00 40.91 3.67
242 243 1.276421 CTAGTGGGTCTGGTCACTTGG 59.724 57.143 1.24 0.00 43.19 3.61
243 244 1.276421 CCTAGTGGGTCTGGTCACTTG 59.724 57.143 1.24 0.30 43.19 3.16
244 245 1.645710 CCTAGTGGGTCTGGTCACTT 58.354 55.000 1.24 0.00 43.19 3.16
245 246 3.383162 CCTAGTGGGTCTGGTCACT 57.617 57.895 0.00 0.00 45.10 3.41
255 256 4.162690 GCTGCCGGACCTAGTGGG 62.163 72.222 5.05 0.00 41.89 4.61
256 257 3.376935 CTGCTGCCGGACCTAGTGG 62.377 68.421 5.05 0.00 39.83 4.00
257 258 2.185350 CTGCTGCCGGACCTAGTG 59.815 66.667 5.05 0.00 0.00 2.74
258 259 3.775654 GCTGCTGCCGGACCTAGT 61.776 66.667 5.05 0.00 0.00 2.57
259 260 4.880537 CGCTGCTGCCGGACCTAG 62.881 72.222 5.05 0.00 35.36 3.02
266 267 3.862063 GAACAACACGCTGCTGCCG 62.862 63.158 10.24 7.82 35.36 5.69
267 268 2.050985 GAACAACACGCTGCTGCC 60.051 61.111 10.24 0.00 35.36 4.85
268 269 1.369689 CTGAACAACACGCTGCTGC 60.370 57.895 5.34 5.34 0.00 5.25
269 270 0.870393 ATCTGAACAACACGCTGCTG 59.130 50.000 0.00 0.00 0.00 4.41
270 271 1.151668 GATCTGAACAACACGCTGCT 58.848 50.000 0.00 0.00 0.00 4.24
271 272 0.166814 GGATCTGAACAACACGCTGC 59.833 55.000 0.00 0.00 0.00 5.25
272 273 0.439985 CGGATCTGAACAACACGCTG 59.560 55.000 0.00 0.00 0.00 5.18
273 274 1.291877 GCGGATCTGAACAACACGCT 61.292 55.000 5.48 0.00 41.99 5.07
274 275 1.132640 GCGGATCTGAACAACACGC 59.867 57.895 5.48 0.00 38.70 5.34
275 276 0.439985 CAGCGGATCTGAACAACACG 59.560 55.000 5.48 0.00 45.72 4.49
276 277 0.166814 GCAGCGGATCTGAACAACAC 59.833 55.000 5.48 0.00 45.72 3.32
277 278 0.955428 GGCAGCGGATCTGAACAACA 60.955 55.000 5.48 0.00 45.72 3.33
278 279 1.796796 GGCAGCGGATCTGAACAAC 59.203 57.895 5.48 0.00 45.72 3.32
279 280 1.741401 CGGCAGCGGATCTGAACAA 60.741 57.895 5.48 0.00 45.72 2.83
280 281 2.125552 CGGCAGCGGATCTGAACA 60.126 61.111 5.48 0.00 45.72 3.18
281 282 3.567797 GCGGCAGCGGATCTGAAC 61.568 66.667 5.48 0.00 45.72 3.18
298 299 4.180946 CTCACCCGAGTCGCCGAG 62.181 72.222 7.12 8.25 34.29 4.63
301 302 4.131088 GTCCTCACCCGAGTCGCC 62.131 72.222 7.12 0.00 37.59 5.54
302 303 4.131088 GGTCCTCACCCGAGTCGC 62.131 72.222 7.12 0.00 37.59 5.19
303 304 2.361357 AGGTCCTCACCCGAGTCG 60.361 66.667 5.29 5.29 45.12 4.18
304 305 2.053277 GGAGGTCCTCACCCGAGTC 61.053 68.421 20.72 0.00 45.12 3.36
305 306 2.037527 GGAGGTCCTCACCCGAGT 59.962 66.667 20.72 0.00 45.12 4.18
306 307 2.360980 AGGAGGTCCTCACCCGAG 59.639 66.667 20.72 0.00 44.77 4.63
316 317 4.176851 GACGTCGCGGAGGAGGTC 62.177 72.222 6.13 4.29 42.40 3.85
318 319 3.471244 GATGACGTCGCGGAGGAGG 62.471 68.421 11.62 0.00 0.00 4.30
319 320 2.024871 GATGACGTCGCGGAGGAG 59.975 66.667 11.62 0.00 0.00 3.69
320 321 3.515286 GGATGACGTCGCGGAGGA 61.515 66.667 11.62 0.00 0.00 3.71
321 322 3.822192 TGGATGACGTCGCGGAGG 61.822 66.667 11.62 1.19 0.00 4.30
322 323 2.579787 GTGGATGACGTCGCGGAG 60.580 66.667 11.62 2.73 0.00 4.63
323 324 4.470170 CGTGGATGACGTCGCGGA 62.470 66.667 11.62 0.00 43.50 5.54
331 332 0.741221 GTCAAGGGCTCGTGGATGAC 60.741 60.000 0.00 0.00 0.00 3.06
332 333 1.596934 GTCAAGGGCTCGTGGATGA 59.403 57.895 0.00 0.00 0.00 2.92
333 334 1.450312 GGTCAAGGGCTCGTGGATG 60.450 63.158 0.00 0.00 0.00 3.51
334 335 1.613630 AGGTCAAGGGCTCGTGGAT 60.614 57.895 0.00 0.00 0.00 3.41
335 336 2.203788 AGGTCAAGGGCTCGTGGA 60.204 61.111 0.00 0.00 0.00 4.02
336 337 2.266055 GAGGTCAAGGGCTCGTGG 59.734 66.667 0.00 0.00 0.00 4.94
337 338 2.125912 CGAGGTCAAGGGCTCGTG 60.126 66.667 0.00 0.00 34.99 4.35
338 339 2.776370 TACCGAGGTCAAGGGCTCGT 62.776 60.000 0.00 0.00 37.60 4.18
339 340 2.005960 CTACCGAGGTCAAGGGCTCG 62.006 65.000 0.00 0.00 38.83 5.03
340 341 0.683504 TCTACCGAGGTCAAGGGCTC 60.684 60.000 0.00 0.00 0.00 4.70
341 342 0.684805 CTCTACCGAGGTCAAGGGCT 60.685 60.000 0.00 0.00 33.51 5.19
342 343 0.683504 TCTCTACCGAGGTCAAGGGC 60.684 60.000 0.00 0.00 37.86 5.19
343 344 1.104630 GTCTCTACCGAGGTCAAGGG 58.895 60.000 0.00 0.00 37.86 3.95
344 345 0.733729 CGTCTCTACCGAGGTCAAGG 59.266 60.000 0.00 0.00 37.86 3.61
345 346 0.733729 CCGTCTCTACCGAGGTCAAG 59.266 60.000 0.00 0.00 37.86 3.02
346 347 0.325933 TCCGTCTCTACCGAGGTCAA 59.674 55.000 0.00 0.00 37.86 3.18
347 348 0.392193 GTCCGTCTCTACCGAGGTCA 60.392 60.000 0.00 0.00 37.86 4.02
348 349 0.392193 TGTCCGTCTCTACCGAGGTC 60.392 60.000 0.00 0.00 37.86 3.85
349 350 0.037303 TTGTCCGTCTCTACCGAGGT 59.963 55.000 0.00 0.00 37.86 3.85
350 351 0.450983 GTTGTCCGTCTCTACCGAGG 59.549 60.000 0.00 0.00 37.86 4.63
351 352 0.450983 GGTTGTCCGTCTCTACCGAG 59.549 60.000 0.00 0.00 38.67 4.63
352 353 2.559785 GGTTGTCCGTCTCTACCGA 58.440 57.895 0.00 0.00 0.00 4.69
376 377 1.013524 ATTGCATTTTTGCGGCGTCC 61.014 50.000 9.37 0.00 37.69 4.79
377 378 0.789601 AATTGCATTTTTGCGGCGTC 59.210 45.000 9.37 0.91 37.69 5.19
378 379 1.070041 CAAATTGCATTTTTGCGGCGT 60.070 42.857 9.37 0.00 37.69 5.68
379 380 1.194098 TCAAATTGCATTTTTGCGGCG 59.806 42.857 14.62 0.51 37.69 6.46
380 381 2.965477 TCAAATTGCATTTTTGCGGC 57.035 40.000 14.62 0.00 37.69 6.53
381 382 3.661819 CGATCAAATTGCATTTTTGCGG 58.338 40.909 14.62 1.69 37.69 5.69
382 383 3.085700 GCGATCAAATTGCATTTTTGCG 58.914 40.909 14.62 13.95 39.53 4.85
383 384 3.085700 CGCGATCAAATTGCATTTTTGC 58.914 40.909 0.00 10.56 39.73 3.68
384 385 4.565090 TCGCGATCAAATTGCATTTTTG 57.435 36.364 3.71 13.68 39.73 2.44
385 386 4.091800 CCTTCGCGATCAAATTGCATTTTT 59.908 37.500 10.88 0.00 39.73 1.94
386 387 3.613737 CCTTCGCGATCAAATTGCATTTT 59.386 39.130 10.88 0.75 39.73 1.82
387 388 3.181397 CCTTCGCGATCAAATTGCATTT 58.819 40.909 10.88 0.00 39.73 2.32
388 389 2.164219 ACCTTCGCGATCAAATTGCATT 59.836 40.909 10.88 0.00 39.73 3.56
389 390 1.745087 ACCTTCGCGATCAAATTGCAT 59.255 42.857 10.88 0.00 39.73 3.96
390 391 1.164411 ACCTTCGCGATCAAATTGCA 58.836 45.000 10.88 0.00 39.73 4.08
391 392 2.159517 AGAACCTTCGCGATCAAATTGC 60.160 45.455 10.88 0.00 36.29 3.56
392 393 3.125146 TCAGAACCTTCGCGATCAAATTG 59.875 43.478 10.88 5.71 0.00 2.32
393 394 3.334691 TCAGAACCTTCGCGATCAAATT 58.665 40.909 10.88 0.00 0.00 1.82
394 395 2.972625 TCAGAACCTTCGCGATCAAAT 58.027 42.857 10.88 0.00 0.00 2.32
395 396 2.448926 TCAGAACCTTCGCGATCAAA 57.551 45.000 10.88 0.00 0.00 2.69
396 397 2.270923 CATCAGAACCTTCGCGATCAA 58.729 47.619 10.88 0.00 0.00 2.57
397 398 1.926561 CATCAGAACCTTCGCGATCA 58.073 50.000 10.88 0.00 0.00 2.92
398 399 0.579156 GCATCAGAACCTTCGCGATC 59.421 55.000 10.88 4.08 0.00 3.69
399 400 1.148157 CGCATCAGAACCTTCGCGAT 61.148 55.000 10.88 0.00 45.17 4.58
400 401 1.805539 CGCATCAGAACCTTCGCGA 60.806 57.895 3.71 3.71 45.17 5.87
401 402 1.746727 CTCGCATCAGAACCTTCGCG 61.747 60.000 0.00 0.00 43.80 5.87
402 403 1.424493 CCTCGCATCAGAACCTTCGC 61.424 60.000 0.00 0.00 0.00 4.70
403 404 0.807667 CCCTCGCATCAGAACCTTCG 60.808 60.000 0.00 0.00 0.00 3.79
404 405 0.250513 ACCCTCGCATCAGAACCTTC 59.749 55.000 0.00 0.00 0.00 3.46
405 406 0.693049 AACCCTCGCATCAGAACCTT 59.307 50.000 0.00 0.00 0.00 3.50
406 407 0.250513 GAACCCTCGCATCAGAACCT 59.749 55.000 0.00 0.00 0.00 3.50
407 408 1.084370 CGAACCCTCGCATCAGAACC 61.084 60.000 0.00 0.00 38.45 3.62
408 409 1.084370 CCGAACCCTCGCATCAGAAC 61.084 60.000 0.00 0.00 44.04 3.01
409 410 1.218047 CCGAACCCTCGCATCAGAA 59.782 57.895 0.00 0.00 44.04 3.02
410 411 2.892640 CCGAACCCTCGCATCAGA 59.107 61.111 0.00 0.00 44.04 3.27
411 412 2.892425 GCCGAACCCTCGCATCAG 60.892 66.667 0.00 0.00 44.04 2.90
412 413 3.390521 AGCCGAACCCTCGCATCA 61.391 61.111 0.00 0.00 44.04 3.07
413 414 2.892425 CAGCCGAACCCTCGCATC 60.892 66.667 0.00 0.00 44.04 3.91
414 415 3.706373 ACAGCCGAACCCTCGCAT 61.706 61.111 0.00 0.00 44.04 4.73
415 416 4.680237 CACAGCCGAACCCTCGCA 62.680 66.667 0.00 0.00 44.04 5.10
417 418 3.649277 CTCCACAGCCGAACCCTCG 62.649 68.421 0.00 0.00 45.02 4.63
418 419 2.266055 CTCCACAGCCGAACCCTC 59.734 66.667 0.00 0.00 0.00 4.30
419 420 3.322466 CCTCCACAGCCGAACCCT 61.322 66.667 0.00 0.00 0.00 4.34
421 422 4.329545 TGCCTCCACAGCCGAACC 62.330 66.667 0.00 0.00 0.00 3.62
422 423 2.743928 CTGCCTCCACAGCCGAAC 60.744 66.667 0.00 0.00 0.00 3.95
423 424 2.922503 TCTGCCTCCACAGCCGAA 60.923 61.111 0.00 0.00 37.59 4.30
424 425 3.385384 CTCTGCCTCCACAGCCGA 61.385 66.667 0.00 0.00 37.59 5.54
425 426 2.454832 TTTCTCTGCCTCCACAGCCG 62.455 60.000 0.00 0.00 37.59 5.52
426 427 0.034670 ATTTCTCTGCCTCCACAGCC 60.035 55.000 0.00 0.00 37.59 4.85
427 428 1.093159 CATTTCTCTGCCTCCACAGC 58.907 55.000 0.00 0.00 37.59 4.40
428 429 2.630158 CTCATTTCTCTGCCTCCACAG 58.370 52.381 0.00 0.00 39.12 3.66
429 430 1.280133 CCTCATTTCTCTGCCTCCACA 59.720 52.381 0.00 0.00 0.00 4.17
430 431 1.556911 TCCTCATTTCTCTGCCTCCAC 59.443 52.381 0.00 0.00 0.00 4.02
431 432 1.836166 CTCCTCATTTCTCTGCCTCCA 59.164 52.381 0.00 0.00 0.00 3.86
432 433 1.836802 ACTCCTCATTTCTCTGCCTCC 59.163 52.381 0.00 0.00 0.00 4.30
433 434 2.903798 CACTCCTCATTTCTCTGCCTC 58.096 52.381 0.00 0.00 0.00 4.70
434 435 1.065564 GCACTCCTCATTTCTCTGCCT 60.066 52.381 0.00 0.00 0.00 4.75
435 436 1.377536 GCACTCCTCATTTCTCTGCC 58.622 55.000 0.00 0.00 0.00 4.85
436 437 1.339438 TGGCACTCCTCATTTCTCTGC 60.339 52.381 0.00 0.00 0.00 4.26
437 438 2.775911 TGGCACTCCTCATTTCTCTG 57.224 50.000 0.00 0.00 0.00 3.35
438 439 5.104193 ACAATATGGCACTCCTCATTTCTCT 60.104 40.000 0.00 0.00 0.00 3.10
439 440 5.008415 CACAATATGGCACTCCTCATTTCTC 59.992 44.000 0.00 0.00 0.00 2.87
440 441 4.885907 CACAATATGGCACTCCTCATTTCT 59.114 41.667 0.00 0.00 0.00 2.52
441 442 4.037208 CCACAATATGGCACTCCTCATTTC 59.963 45.833 0.00 0.00 43.24 2.17
442 443 3.956199 CCACAATATGGCACTCCTCATTT 59.044 43.478 0.00 0.00 43.24 2.32
443 444 3.559069 CCACAATATGGCACTCCTCATT 58.441 45.455 0.00 0.00 43.24 2.57
444 445 3.219176 CCACAATATGGCACTCCTCAT 57.781 47.619 0.00 0.00 43.24 2.90
445 446 2.715749 CCACAATATGGCACTCCTCA 57.284 50.000 0.00 0.00 43.24 3.86
455 456 9.487790 ACTTTACAAATTTTGACCCACAATATG 57.512 29.630 15.81 0.00 38.36 1.78
456 457 9.705290 GACTTTACAAATTTTGACCCACAATAT 57.295 29.630 15.81 0.00 38.36 1.28
457 458 8.919145 AGACTTTACAAATTTTGACCCACAATA 58.081 29.630 15.81 0.00 38.36 1.90
458 459 7.710475 CAGACTTTACAAATTTTGACCCACAAT 59.290 33.333 15.81 0.00 38.36 2.71
459 460 7.038659 CAGACTTTACAAATTTTGACCCACAA 58.961 34.615 15.81 0.00 36.65 3.33
460 461 6.406400 CCAGACTTTACAAATTTTGACCCACA 60.406 38.462 15.81 0.00 0.00 4.17
461 462 5.983118 CCAGACTTTACAAATTTTGACCCAC 59.017 40.000 15.81 3.34 0.00 4.61
462 463 5.659079 ACCAGACTTTACAAATTTTGACCCA 59.341 36.000 15.81 0.00 0.00 4.51
463 464 6.156748 ACCAGACTTTACAAATTTTGACCC 57.843 37.500 15.81 0.00 0.00 4.46
464 465 6.019075 GCAACCAGACTTTACAAATTTTGACC 60.019 38.462 15.81 0.00 0.00 4.02
465 466 6.533367 TGCAACCAGACTTTACAAATTTTGAC 59.467 34.615 15.81 1.08 0.00 3.18
466 467 6.634805 TGCAACCAGACTTTACAAATTTTGA 58.365 32.000 15.81 0.00 0.00 2.69
467 468 6.756074 TCTGCAACCAGACTTTACAAATTTTG 59.244 34.615 7.59 7.59 42.98 2.44
468 469 6.872920 TCTGCAACCAGACTTTACAAATTTT 58.127 32.000 0.00 0.00 42.98 1.82
469 470 6.463995 TCTGCAACCAGACTTTACAAATTT 57.536 33.333 0.00 0.00 42.98 1.82
523 524 8.839343 CCTTGCTTTGAAGGAAATAAAAACATT 58.161 29.630 0.00 0.00 44.87 2.71
536 537 1.341209 GTGGGTTCCTTGCTTTGAAGG 59.659 52.381 0.00 0.00 43.61 3.46
643 656 4.077184 GACACGCGGGACCATGGA 62.077 66.667 19.19 0.00 0.00 3.41
646 659 4.082523 CCAGACACGCGGGACCAT 62.083 66.667 19.19 0.00 33.08 3.55
704 717 0.379669 TCTATCGGACGCGTTCTTCC 59.620 55.000 15.53 9.23 0.00 3.46
715 729 1.442526 GGTTCGGCTCGTCTATCGGA 61.443 60.000 0.00 0.00 40.32 4.55
720 734 1.870055 AAAGCGGTTCGGCTCGTCTA 61.870 55.000 0.00 0.00 43.93 2.59
940 965 1.685421 GGAGGGAGCTGAGCTGAGT 60.685 63.158 13.71 0.00 39.88 3.41
1195 1252 2.202440 CTGCTGCGCTACGTACGT 60.202 61.111 25.98 25.98 0.00 3.57
1196 1253 1.934956 CTCTGCTGCGCTACGTACG 60.935 63.158 15.01 15.01 0.00 3.67
1197 1254 1.586564 CCTCTGCTGCGCTACGTAC 60.587 63.158 9.73 0.00 0.00 3.67
1198 1255 1.715862 CTCCTCTGCTGCGCTACGTA 61.716 60.000 9.73 0.00 0.00 3.57
1247 1312 6.350906 CATGCCATAACCATCCAAAAATTCT 58.649 36.000 0.00 0.00 0.00 2.40
1277 1342 6.511605 CGCGTATGATCATCAGAAATTCCAAA 60.512 38.462 12.53 0.00 0.00 3.28
1278 1343 5.050159 CGCGTATGATCATCAGAAATTCCAA 60.050 40.000 12.53 0.00 0.00 3.53
1279 1344 4.448732 CGCGTATGATCATCAGAAATTCCA 59.551 41.667 12.53 0.00 0.00 3.53
1280 1345 4.686091 TCGCGTATGATCATCAGAAATTCC 59.314 41.667 12.53 0.00 0.00 3.01
1321 1392 3.117745 ACCATCTCATGACATCAAGGGA 58.882 45.455 0.00 0.00 0.00 4.20
1362 1433 8.609176 GTGATTAAATTAATTCTAGTCGGCACA 58.391 33.333 0.10 0.00 0.00 4.57
1363 1434 8.068380 GGTGATTAAATTAATTCTAGTCGGCAC 58.932 37.037 0.10 0.93 0.00 5.01
1364 1435 7.990886 AGGTGATTAAATTAATTCTAGTCGGCA 59.009 33.333 0.10 0.00 0.00 5.69
1365 1436 8.283291 CAGGTGATTAAATTAATTCTAGTCGGC 58.717 37.037 0.10 0.00 0.00 5.54
1366 1437 8.283291 GCAGGTGATTAAATTAATTCTAGTCGG 58.717 37.037 0.10 0.00 0.00 4.79
1367 1438 8.004344 CGCAGGTGATTAAATTAATTCTAGTCG 58.996 37.037 0.10 0.00 0.00 4.18
1471 1569 5.036117 TCAGCCACCTCCAAAATATAGTC 57.964 43.478 0.00 0.00 0.00 2.59
1513 1611 3.118408 ACACACACACACACACTCCTAAT 60.118 43.478 0.00 0.00 0.00 1.73
1529 1627 5.705441 AGAAAAGAAAGACTGAACACACACA 59.295 36.000 0.00 0.00 0.00 3.72
1530 1628 6.183309 AGAAAAGAAAGACTGAACACACAC 57.817 37.500 0.00 0.00 0.00 3.82
1625 1723 5.544136 AATTCAAACACAACTTTTGGTGC 57.456 34.783 0.00 0.00 41.86 5.01
1702 1800 6.150641 GTGACACTTGACTATGGTAGACTGTA 59.849 42.308 0.00 0.00 0.00 2.74
1716 1814 4.438744 CCAGAAGTTTTGGTGACACTTGAC 60.439 45.833 5.39 0.29 42.67 3.18
1729 1827 6.225981 AGTTGAATTTCAGCCAGAAGTTTT 57.774 33.333 9.33 0.00 36.44 2.43
1732 1830 5.827797 TGTTAGTTGAATTTCAGCCAGAAGT 59.172 36.000 9.33 0.00 37.57 3.01
1733 1831 6.016777 ACTGTTAGTTGAATTTCAGCCAGAAG 60.017 38.462 18.04 11.03 37.57 2.85
1734 1832 5.827797 ACTGTTAGTTGAATTTCAGCCAGAA 59.172 36.000 18.04 6.79 0.00 3.02
1735 1833 5.376625 ACTGTTAGTTGAATTTCAGCCAGA 58.623 37.500 18.04 3.61 0.00 3.86
1736 1834 5.695851 ACTGTTAGTTGAATTTCAGCCAG 57.304 39.130 9.33 11.40 0.00 4.85
1737 1835 6.016610 GGTAACTGTTAGTTGAATTTCAGCCA 60.017 38.462 9.33 1.17 39.11 4.75
1738 1836 6.016610 TGGTAACTGTTAGTTGAATTTCAGCC 60.017 38.462 9.33 0.69 39.11 4.85
1739 1837 6.966021 TGGTAACTGTTAGTTGAATTTCAGC 58.034 36.000 5.20 5.20 39.11 4.26
1740 1838 9.796120 TTTTGGTAACTGTTAGTTGAATTTCAG 57.204 29.630 0.00 0.00 39.11 3.02
1746 1844 9.575783 GTCAAATTTTGGTAACTGTTAGTTGAA 57.424 29.630 9.18 0.00 39.11 2.69
1747 1845 8.740906 TGTCAAATTTTGGTAACTGTTAGTTGA 58.259 29.630 9.18 0.00 39.11 3.18
1748 1846 8.918961 TGTCAAATTTTGGTAACTGTTAGTTG 57.081 30.769 9.18 0.00 39.11 3.16
1750 1848 9.361315 GTTTGTCAAATTTTGGTAACTGTTAGT 57.639 29.630 9.18 0.00 37.61 2.24
1751 1849 9.360093 TGTTTGTCAAATTTTGGTAACTGTTAG 57.640 29.630 9.18 0.00 37.61 2.34
1753 1851 7.875554 ACTGTTTGTCAAATTTTGGTAACTGTT 59.124 29.630 9.18 0.00 31.32 3.16
1754 1852 7.382898 ACTGTTTGTCAAATTTTGGTAACTGT 58.617 30.769 9.18 14.75 37.61 3.55
1757 1855 8.245701 TCAACTGTTTGTCAAATTTTGGTAAC 57.754 30.769 9.18 10.64 34.02 2.50
1758 1856 8.833231 TTCAACTGTTTGTCAAATTTTGGTAA 57.167 26.923 9.18 2.78 34.02 2.85
1759 1857 9.442047 AATTCAACTGTTTGTCAAATTTTGGTA 57.558 25.926 9.18 0.00 34.02 3.25
1763 1861 9.934190 GCATAATTCAACTGTTTGTCAAATTTT 57.066 25.926 0.40 0.00 34.02 1.82
1764 1862 9.328845 AGCATAATTCAACTGTTTGTCAAATTT 57.671 25.926 0.40 0.00 34.02 1.82
1767 1865 7.978414 TGAAGCATAATTCAACTGTTTGTCAAA 59.022 29.630 0.00 0.00 36.28 2.69
1768 1866 7.487484 TGAAGCATAATTCAACTGTTTGTCAA 58.513 30.769 0.00 0.00 36.28 3.18
1769 1867 7.036996 TGAAGCATAATTCAACTGTTTGTCA 57.963 32.000 0.00 0.00 36.28 3.58
1770 1868 7.928908 TTGAAGCATAATTCAACTGTTTGTC 57.071 32.000 0.00 0.00 42.68 3.18
1785 1883 9.407380 ACAGTTATAATGGAATGTTGAAGCATA 57.593 29.630 0.00 0.00 0.00 3.14
1786 1884 8.297470 ACAGTTATAATGGAATGTTGAAGCAT 57.703 30.769 0.00 0.00 0.00 3.79
1787 1885 7.392953 TGACAGTTATAATGGAATGTTGAAGCA 59.607 33.333 0.00 0.00 0.00 3.91
1788 1886 7.698130 GTGACAGTTATAATGGAATGTTGAAGC 59.302 37.037 0.00 0.00 0.00 3.86
1789 1887 8.184192 GGTGACAGTTATAATGGAATGTTGAAG 58.816 37.037 0.00 0.00 0.00 3.02
1790 1888 7.148323 CGGTGACAGTTATAATGGAATGTTGAA 60.148 37.037 0.00 0.00 0.00 2.69
1791 1889 6.315144 CGGTGACAGTTATAATGGAATGTTGA 59.685 38.462 0.00 0.00 0.00 3.18
1792 1890 6.315144 TCGGTGACAGTTATAATGGAATGTTG 59.685 38.462 0.00 0.00 0.00 3.33
1793 1891 6.315393 GTCGGTGACAGTTATAATGGAATGTT 59.685 38.462 0.00 0.00 32.09 2.71
1794 1892 5.815740 GTCGGTGACAGTTATAATGGAATGT 59.184 40.000 0.00 0.00 32.09 2.71
1795 1893 5.236478 GGTCGGTGACAGTTATAATGGAATG 59.764 44.000 0.00 0.00 33.68 2.67
1796 1894 5.365619 GGTCGGTGACAGTTATAATGGAAT 58.634 41.667 0.00 0.00 33.68 3.01
1797 1895 4.678574 CGGTCGGTGACAGTTATAATGGAA 60.679 45.833 0.00 0.00 33.68 3.53
1798 1896 3.181484 CGGTCGGTGACAGTTATAATGGA 60.181 47.826 0.00 0.00 33.68 3.41
1799 1897 3.120792 CGGTCGGTGACAGTTATAATGG 58.879 50.000 0.00 0.00 33.68 3.16
1800 1898 4.036567 TCGGTCGGTGACAGTTATAATG 57.963 45.455 0.00 0.00 33.68 1.90
1801 1899 3.067742 CCTCGGTCGGTGACAGTTATAAT 59.932 47.826 0.00 0.00 33.68 1.28
1802 1900 2.424601 CCTCGGTCGGTGACAGTTATAA 59.575 50.000 0.00 0.00 33.68 0.98
1803 1901 2.019249 CCTCGGTCGGTGACAGTTATA 58.981 52.381 0.00 0.00 33.68 0.98
1804 1902 0.815734 CCTCGGTCGGTGACAGTTAT 59.184 55.000 0.00 0.00 33.68 1.89
1805 1903 0.250858 TCCTCGGTCGGTGACAGTTA 60.251 55.000 0.00 0.00 33.68 2.24
1806 1904 1.529948 TCCTCGGTCGGTGACAGTT 60.530 57.895 0.00 0.00 33.68 3.16
1807 1905 2.114625 TCCTCGGTCGGTGACAGT 59.885 61.111 0.00 0.00 33.68 3.55
1808 1906 1.524863 AAGTCCTCGGTCGGTGACAG 61.525 60.000 12.76 0.00 33.68 3.51
1809 1907 1.529948 AAGTCCTCGGTCGGTGACA 60.530 57.895 12.76 0.00 33.68 3.58
1810 1908 1.080705 CAAGTCCTCGGTCGGTGAC 60.081 63.158 5.50 5.50 0.00 3.67
1811 1909 1.228337 TCAAGTCCTCGGTCGGTGA 60.228 57.895 0.00 0.00 0.00 4.02
1812 1910 1.213013 CTCAAGTCCTCGGTCGGTG 59.787 63.158 0.00 0.00 0.00 4.94
1813 1911 2.637383 GCTCAAGTCCTCGGTCGGT 61.637 63.158 0.00 0.00 0.00 4.69
1814 1912 1.878656 AAGCTCAAGTCCTCGGTCGG 61.879 60.000 0.00 0.00 0.00 4.79
1815 1913 0.734253 CAAGCTCAAGTCCTCGGTCG 60.734 60.000 0.00 0.00 0.00 4.79
1816 1914 1.016653 GCAAGCTCAAGTCCTCGGTC 61.017 60.000 0.00 0.00 0.00 4.79
1817 1915 1.004440 GCAAGCTCAAGTCCTCGGT 60.004 57.895 0.00 0.00 0.00 4.69
1818 1916 0.321122 AAGCAAGCTCAAGTCCTCGG 60.321 55.000 0.00 0.00 0.00 4.63
1819 1917 1.517242 AAAGCAAGCTCAAGTCCTCG 58.483 50.000 0.00 0.00 0.00 4.63
1820 1918 3.145286 AGAAAAGCAAGCTCAAGTCCTC 58.855 45.455 0.00 0.00 0.00 3.71
1821 1919 3.220674 AGAAAAGCAAGCTCAAGTCCT 57.779 42.857 0.00 0.00 0.00 3.85
1822 1920 3.998099 AAGAAAAGCAAGCTCAAGTCC 57.002 42.857 0.00 0.00 0.00 3.85
1823 1921 5.681337 ACTAAGAAAAGCAAGCTCAAGTC 57.319 39.130 0.00 0.00 0.00 3.01
1824 1922 6.292150 ACTACTAAGAAAAGCAAGCTCAAGT 58.708 36.000 0.00 0.00 0.00 3.16
1825 1923 6.793492 ACTACTAAGAAAAGCAAGCTCAAG 57.207 37.500 0.00 0.00 0.00 3.02
1826 1924 7.442656 AGTACTACTAAGAAAAGCAAGCTCAA 58.557 34.615 0.00 0.00 0.00 3.02
1827 1925 6.994221 AGTACTACTAAGAAAAGCAAGCTCA 58.006 36.000 0.00 0.00 0.00 4.26
1828 1926 6.532302 GGAGTACTACTAAGAAAAGCAAGCTC 59.468 42.308 0.00 0.00 0.00 4.09
1829 1927 6.211785 AGGAGTACTACTAAGAAAAGCAAGCT 59.788 38.462 5.58 0.00 0.00 3.74
1831 1929 8.958506 TCTAGGAGTACTACTAAGAAAAGCAAG 58.041 37.037 15.80 2.37 0.00 4.01
1838 1936 8.272889 TGCATCTTCTAGGAGTACTACTAAGAA 58.727 37.037 19.70 18.95 34.62 2.52
1840 1938 8.453238 TTGCATCTTCTAGGAGTACTACTAAG 57.547 38.462 15.80 12.86 0.00 2.18
1841 1939 8.684520 GTTTGCATCTTCTAGGAGTACTACTAA 58.315 37.037 15.80 3.33 0.00 2.24
1845 1943 5.884232 TCGTTTGCATCTTCTAGGAGTACTA 59.116 40.000 0.00 0.00 0.00 1.82
1852 1950 8.365399 TGTATTATTCGTTTGCATCTTCTAGG 57.635 34.615 0.00 0.00 0.00 3.02
1878 1976 3.984508 ACATCTCATGCATAGCAAAGC 57.015 42.857 0.00 0.00 43.62 3.51
1894 1992 4.662468 TGGAGCTCTACATCAGAACATC 57.338 45.455 14.64 0.00 31.12 3.06
1959 2058 0.033208 TGAGGGCCTGCTTAATTGGG 60.033 55.000 12.95 0.00 0.00 4.12
1964 2063 0.998928 TCCATTGAGGGCCTGCTTAA 59.001 50.000 12.95 0.51 38.24 1.85
1972 2071 1.753073 CTGAATGGTTCCATTGAGGGC 59.247 52.381 19.95 7.36 36.86 5.19
2153 2253 2.248280 AACCATCGCACACAACAGTA 57.752 45.000 0.00 0.00 0.00 2.74
2206 2306 0.319555 TAGACGCAACAGCACCTCAC 60.320 55.000 0.00 0.00 0.00 3.51
2208 2308 1.194772 GTTTAGACGCAACAGCACCTC 59.805 52.381 0.00 0.00 0.00 3.85
2327 2479 4.514577 CCGCTCGTGCCTCCGAAT 62.515 66.667 3.52 0.00 36.24 3.34
2455 2607 2.529632 ACAGAAGGGGAAAAAGGCATC 58.470 47.619 0.00 0.00 0.00 3.91
2489 2644 4.509970 GCAAACAAGGGTTTATGGTTTGAC 59.490 41.667 16.89 6.88 46.81 3.18
3251 3417 3.718210 CTAGGCACCCCGAAGACGC 62.718 68.421 0.00 0.00 38.29 5.19
3260 3426 4.322801 CCATTACATAGCTACTAGGCACCC 60.323 50.000 0.00 0.00 34.17 4.61
3269 3435 7.656542 GGGTAGAAAGTTCCATTACATAGCTAC 59.343 40.741 0.00 0.00 0.00 3.58
3314 3480 5.118664 CACAGTTAACTGACATGGTCTTACG 59.881 44.000 36.14 9.97 46.59 3.18
3383 3556 1.789576 ATGGCGGGAAAGGGAAGTGT 61.790 55.000 0.00 0.00 0.00 3.55
3394 3567 2.374184 CCTGTAAATGAAATGGCGGGA 58.626 47.619 0.00 0.00 0.00 5.14
3486 3659 2.685017 AGCTGGTGGCCGAGATGA 60.685 61.111 0.00 0.00 43.05 2.92
3943 4116 1.832167 GCTCCTCTCATCCTCGGCT 60.832 63.158 0.00 0.00 0.00 5.52
4044 4217 3.411446 TGATTGATGTTCCTCGTTGCTT 58.589 40.909 0.00 0.00 0.00 3.91
4048 4221 4.023193 GGTGTTTGATTGATGTTCCTCGTT 60.023 41.667 0.00 0.00 0.00 3.85
4087 4271 3.305676 CGTGCTCTATCGATTCCCAAGAT 60.306 47.826 1.71 0.00 0.00 2.40
4090 4274 1.538204 GCGTGCTCTATCGATTCCCAA 60.538 52.381 1.71 0.00 0.00 4.12
4091 4275 0.032130 GCGTGCTCTATCGATTCCCA 59.968 55.000 1.71 0.00 0.00 4.37
4097 4281 4.776795 TTATTATGGCGTGCTCTATCGA 57.223 40.909 0.00 0.00 0.00 3.59
4102 4286 5.611374 AGTGTATTTATTATGGCGTGCTCT 58.389 37.500 0.00 0.00 0.00 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.