Multiple sequence alignment - TraesCS6D01G141500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G141500 chr6D 100.000 5523 0 0 1 5523 110886063 110891585 0.000000e+00 10200.0
1 TraesCS6D01G141500 chr6B 88.723 2146 111 60 1 2111 199767513 199769562 0.000000e+00 2501.0
2 TraesCS6D01G141500 chr6B 90.041 723 61 9 3372 4087 199770787 199771505 0.000000e+00 926.0
3 TraesCS6D01G141500 chr6B 92.587 634 32 11 4070 4692 199771878 199772507 0.000000e+00 896.0
4 TraesCS6D01G141500 chr6B 83.502 594 87 5 2705 3288 199770199 199770791 1.350000e-150 544.0
5 TraesCS6D01G141500 chr6B 91.549 213 7 2 2101 2302 199769867 199770079 3.260000e-72 283.0
6 TraesCS6D01G141500 chr6B 81.028 253 34 9 4743 4984 199772926 199773175 7.300000e-44 189.0
7 TraesCS6D01G141500 chr6A 90.277 1265 85 22 4068 5313 135272701 135273946 0.000000e+00 1620.0
8 TraesCS6D01G141500 chr6A 82.452 1835 118 66 615 2386 135269281 135270974 0.000000e+00 1417.0
9 TraesCS6D01G141500 chr6A 88.449 606 51 8 3490 4087 135271744 135272338 0.000000e+00 713.0
10 TraesCS6D01G141500 chr6A 86.957 368 27 14 246 604 135268345 135268700 1.440000e-105 394.0
11 TraesCS6D01G141500 chr6A 83.846 130 19 2 5391 5519 608415383 608415255 7.510000e-24 122.0
12 TraesCS6D01G141500 chr6A 92.063 63 5 0 1 63 135249882 135249944 7.620000e-14 89.8
13 TraesCS6D01G141500 chrUn 96.552 145 5 0 2562 2706 95391682 95391538 1.990000e-59 241.0
14 TraesCS6D01G141500 chrUn 96.296 108 4 0 2401 2508 95392135 95392028 1.580000e-40 178.0
15 TraesCS6D01G141500 chr7B 79.730 296 45 13 2419 2706 468158530 468158818 3.370000e-47 200.0
16 TraesCS6D01G141500 chr7B 87.692 130 14 2 5391 5519 723961973 723961845 3.450000e-32 150.0
17 TraesCS6D01G141500 chr7B 85.271 129 18 1 5391 5519 46989300 46989427 1.250000e-26 132.0
18 TraesCS6D01G141500 chr2D 81.140 228 28 9 2484 2705 378039379 378039161 9.520000e-38 169.0
19 TraesCS6D01G141500 chr2D 86.047 129 17 1 5391 5519 540168535 540168408 2.680000e-28 137.0
20 TraesCS6D01G141500 chr2D 83.333 132 21 1 5389 5519 12252293 12252424 2.700000e-23 121.0
21 TraesCS6D01G141500 chr5D 86.923 130 17 0 5390 5519 564008906 564009035 4.460000e-31 147.0
22 TraesCS6D01G141500 chr5D 89.524 105 9 2 5394 5497 486452148 486452251 1.250000e-26 132.0
23 TraesCS6D01G141500 chr5D 77.333 225 30 8 2484 2704 34062430 34062223 4.520000e-21 113.0
24 TraesCS6D01G141500 chr5D 82.051 117 19 1 3148 3264 226949441 226949327 1.270000e-16 99.0
25 TraesCS6D01G141500 chr4B 85.714 133 18 1 5387 5519 74361796 74361927 7.460000e-29 139.0
26 TraesCS6D01G141500 chr1D 84.091 132 19 2 5392 5522 477426733 477426603 5.810000e-25 126.0
27 TraesCS6D01G141500 chr3B 74.627 268 51 9 3534 3794 539937259 539937516 9.790000e-18 102.0
28 TraesCS6D01G141500 chr3B 90.385 52 4 1 5473 5523 22603860 22603809 3.570000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G141500 chr6D 110886063 110891585 5522 False 10200.000000 10200 100.00000 1 5523 1 chr6D.!!$F1 5522
1 TraesCS6D01G141500 chr6B 199767513 199773175 5662 False 889.833333 2501 87.90500 1 4984 6 chr6B.!!$F1 4983
2 TraesCS6D01G141500 chr6A 135268345 135273946 5601 False 1036.000000 1620 87.03375 246 5313 4 chr6A.!!$F2 5067
3 TraesCS6D01G141500 chrUn 95391538 95392135 597 True 209.500000 241 96.42400 2401 2706 2 chrUn.!!$R1 305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.796927 GGTTCGCTTAGTTGTGAGCC 59.203 55.0 0.00 0.00 39.79 4.70 F
1208 1819 0.040958 GTTCGGTCACAGACGTACGT 60.041 55.0 23.04 23.04 32.65 3.57 F
2508 3618 0.106669 GGTAAATCTGGCCTCACCCC 60.107 60.0 3.32 0.00 37.83 4.95 F
3314 4737 0.031857 CTATGAGCTGAGCCCGTCTG 59.968 60.0 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1865 2537 0.032952 TGTCTCGGTTCAGTTTCCCG 59.967 55.0 0.00 0.00 43.03 5.14 R
2736 4150 0.107945 GAGCGGAACAGATGAAGGCT 60.108 55.0 0.00 0.00 0.00 4.58 R
3330 4753 0.104855 TCGATATGAGCTGTGTGGGC 59.895 55.0 0.00 0.00 0.00 5.36 R
5022 7247 0.179006 GGGATGGATGTGCTCTTCCC 60.179 60.0 15.75 7.47 38.37 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 8.872845 GGTTAATTCCAAAATAGCATCAACTTG 58.127 33.333 0.00 0.00 0.00 3.16
70 71 4.858692 CCAAAATAGCATCAACTTGGTTCG 59.141 41.667 0.00 0.00 0.00 3.95
78 79 4.466828 CATCAACTTGGTTCGCTTAGTTG 58.533 43.478 0.00 0.00 45.44 3.16
84 85 0.796927 GGTTCGCTTAGTTGTGAGCC 59.203 55.000 0.00 0.00 39.79 4.70
124 125 6.130298 TGAGTTCGAGCTTTGAATTTTTCA 57.870 33.333 2.39 5.71 38.04 2.69
180 181 1.369091 AATCGCAATCAGACCGTGCC 61.369 55.000 0.00 0.00 34.73 5.01
183 184 1.672356 GCAATCAGACCGTGCCTGT 60.672 57.895 0.00 0.00 33.57 4.00
188 189 2.430248 TCAGACCGTGCCTGTAGATA 57.570 50.000 0.00 0.00 33.57 1.98
193 194 4.459337 CAGACCGTGCCTGTAGATATATGA 59.541 45.833 0.00 0.00 0.00 2.15
194 195 5.126222 CAGACCGTGCCTGTAGATATATGAT 59.874 44.000 0.00 0.00 0.00 2.45
195 196 5.358442 AGACCGTGCCTGTAGATATATGATC 59.642 44.000 0.00 0.00 0.00 2.92
196 197 5.016831 ACCGTGCCTGTAGATATATGATCA 58.983 41.667 0.00 0.00 0.00 2.92
198 199 5.126222 CCGTGCCTGTAGATATATGATCACT 59.874 44.000 0.00 0.00 0.00 3.41
263 266 7.312154 GTGGCACAAAATCATTGTCAATACTA 58.688 34.615 13.86 0.00 44.16 1.82
328 332 8.523915 TGTAATGACATGGCAGAGAATAAAAT 57.476 30.769 7.63 0.00 0.00 1.82
398 402 6.583806 GCACAAACTCTTGGTGAAAAGATATG 59.416 38.462 0.00 0.00 35.67 1.78
399 403 7.651808 CACAAACTCTTGGTGAAAAGATATGT 58.348 34.615 0.00 0.00 35.67 2.29
400 404 8.783093 CACAAACTCTTGGTGAAAAGATATGTA 58.217 33.333 0.00 0.00 35.67 2.29
401 405 9.520515 ACAAACTCTTGGTGAAAAGATATGTAT 57.479 29.630 0.00 0.00 35.67 2.29
402 406 9.778993 CAAACTCTTGGTGAAAAGATATGTATG 57.221 33.333 0.00 0.00 35.67 2.39
428 432 3.467803 CTCCATCCGGAATTACTTGACC 58.532 50.000 9.01 0.00 42.21 4.02
441 445 2.297701 ACTTGACCGCTGAAACAACAT 58.702 42.857 0.00 0.00 0.00 2.71
443 447 1.960417 TGACCGCTGAAACAACATCA 58.040 45.000 0.00 0.00 0.00 3.07
505 511 7.792374 TCTGCCTATAGCTCAACTTAAAATG 57.208 36.000 0.00 0.00 44.23 2.32
524 530 2.068519 TGCACGTGATTAGAGCAACTG 58.931 47.619 22.23 0.00 32.63 3.16
528 538 4.234574 CACGTGATTAGAGCAACTGTGTA 58.765 43.478 10.90 0.00 0.00 2.90
608 1185 1.216064 TGGACATGCTCTAGGCCATT 58.784 50.000 5.01 0.00 40.92 3.16
609 1186 1.141657 TGGACATGCTCTAGGCCATTC 59.858 52.381 5.01 0.00 40.92 2.67
610 1187 1.419387 GGACATGCTCTAGGCCATTCT 59.581 52.381 5.01 0.00 40.92 2.40
611 1188 2.492012 GACATGCTCTAGGCCATTCTG 58.508 52.381 5.01 0.00 40.92 3.02
612 1189 1.236628 CATGCTCTAGGCCATTCTGC 58.763 55.000 5.01 2.89 40.92 4.26
746 1326 4.151798 GCTCACGTACTTTCATTTCAAGC 58.848 43.478 0.00 0.00 0.00 4.01
747 1327 4.712763 CTCACGTACTTTCATTTCAAGCC 58.287 43.478 0.00 0.00 0.00 4.35
870 1467 4.530857 CCCGCTACCCCGCAAGAG 62.531 72.222 0.00 0.00 43.02 2.85
1202 1813 1.429463 GTCCATGTTCGGTCACAGAC 58.571 55.000 0.00 0.00 0.00 3.51
1208 1819 0.040958 GTTCGGTCACAGACGTACGT 60.041 55.000 23.04 23.04 32.65 3.57
1209 1820 1.194547 GTTCGGTCACAGACGTACGTA 59.805 52.381 22.87 1.54 32.65 3.57
1210 1821 0.790207 TCGGTCACAGACGTACGTAC 59.210 55.000 22.87 15.90 32.65 3.67
1266 1879 1.299468 CCTCGGATACTCGCTGTGC 60.299 63.158 0.00 0.00 0.00 4.57
1463 2085 3.761752 CCAACCAACTGATTAATTCCCGT 59.238 43.478 0.00 0.00 0.00 5.28
1504 2126 1.990160 AAACACAGCCGGGGAACAGA 61.990 55.000 2.18 0.00 0.00 3.41
1533 2163 4.160439 CCTGTAGCTTCATCAACTAGACCA 59.840 45.833 0.00 0.00 0.00 4.02
1865 2537 3.486875 CGCCACATTTCCTTTTATCGGTC 60.487 47.826 0.00 0.00 0.00 4.79
1866 2538 3.486875 GCCACATTTCCTTTTATCGGTCG 60.487 47.826 0.00 0.00 0.00 4.79
1867 2539 3.064820 CCACATTTCCTTTTATCGGTCGG 59.935 47.826 0.00 0.00 0.00 4.79
1868 2540 3.064820 CACATTTCCTTTTATCGGTCGGG 59.935 47.826 0.00 0.00 0.00 5.14
1869 2541 3.054948 ACATTTCCTTTTATCGGTCGGGA 60.055 43.478 0.00 0.00 0.00 5.14
1894 2585 0.603975 AACCGAGACAGCCTTGCTTC 60.604 55.000 0.00 0.00 36.40 3.86
1960 2651 1.231221 TGGGACATGGTTTTTCGACG 58.769 50.000 0.00 0.00 0.00 5.12
2073 2778 2.495270 AGAAGAGTGTCGCTGATGTGAT 59.505 45.455 0.00 0.00 34.99 3.06
2074 2779 2.290531 AGAGTGTCGCTGATGTGATG 57.709 50.000 0.00 0.00 34.99 3.07
2125 3150 2.988010 CATCGTTTGATGGAGAGGGA 57.012 50.000 0.00 0.00 46.76 4.20
2224 3249 3.965539 GACTGATGGCCGCACTGCT 62.966 63.158 0.00 0.00 0.00 4.24
2259 3284 6.317391 AGCAGAATACATTAAGAGCAACTTCC 59.683 38.462 0.00 0.00 39.72 3.46
2278 3303 5.535406 ACTTCCGTAGACTAGTCATATTGGG 59.465 44.000 24.44 15.17 0.00 4.12
2302 3333 8.980596 GGGCCCATAATAATCATCAATATGAAA 58.019 33.333 19.95 0.00 45.12 2.69
2326 3387 7.573968 AATTTTGACTGAAAACAGCTCTACT 57.426 32.000 0.00 0.00 36.35 2.57
2369 3430 0.937304 CGCCATTATGTAGCGTGCTT 59.063 50.000 0.00 0.00 44.65 3.91
2394 3455 2.812499 GACCCGCGAGCCTTCATA 59.188 61.111 8.23 0.00 0.00 2.15
2395 3456 1.367840 GACCCGCGAGCCTTCATAT 59.632 57.895 8.23 0.00 0.00 1.78
2397 3458 0.180406 ACCCGCGAGCCTTCATATTT 59.820 50.000 8.23 0.00 0.00 1.40
2399 3460 1.581934 CCGCGAGCCTTCATATTTGA 58.418 50.000 8.23 0.00 0.00 2.69
2458 3519 2.357517 CGACAGGCCACGCTTTCT 60.358 61.111 5.01 0.00 0.00 2.52
2483 3593 8.087982 TCTTTTTAGCAATTCTGGCTATATCG 57.912 34.615 0.00 0.00 42.91 2.92
2499 3609 6.369065 GGCTATATCGTTTGAGGTAAATCTGG 59.631 42.308 0.00 0.00 0.00 3.86
2500 3610 6.128526 GCTATATCGTTTGAGGTAAATCTGGC 60.129 42.308 0.00 0.00 0.00 4.85
2501 3611 2.706890 TCGTTTGAGGTAAATCTGGCC 58.293 47.619 0.00 0.00 0.00 5.36
2502 3612 2.304761 TCGTTTGAGGTAAATCTGGCCT 59.695 45.455 3.32 0.00 34.93 5.19
2503 3613 2.678336 CGTTTGAGGTAAATCTGGCCTC 59.322 50.000 3.32 0.00 46.61 4.70
2506 3616 2.333688 GAGGTAAATCTGGCCTCACC 57.666 55.000 3.32 2.04 45.93 4.02
2507 3617 0.919710 AGGTAAATCTGGCCTCACCC 59.080 55.000 3.32 0.00 37.83 4.61
2508 3618 0.106669 GGTAAATCTGGCCTCACCCC 60.107 60.000 3.32 0.00 37.83 4.95
2509 3619 0.463833 GTAAATCTGGCCTCACCCCG 60.464 60.000 3.32 0.00 37.83 5.73
2510 3620 1.632018 TAAATCTGGCCTCACCCCGG 61.632 60.000 3.32 0.00 37.83 5.73
2530 3640 1.035385 GCCCCACCCGTTGAAATAGG 61.035 60.000 0.00 0.00 0.00 2.57
2558 3668 5.556355 GGGGGTGAGATTTAGTTTTTACG 57.444 43.478 0.00 0.00 0.00 3.18
2559 3669 4.397103 GGGGGTGAGATTTAGTTTTTACGG 59.603 45.833 0.00 0.00 0.00 4.02
2560 3670 4.397103 GGGGTGAGATTTAGTTTTTACGGG 59.603 45.833 0.00 0.00 0.00 5.28
2641 4055 0.393808 TGGGCCCATCTTTCGTTAGC 60.394 55.000 24.45 0.00 0.00 3.09
2642 4056 0.107165 GGGCCCATCTTTCGTTAGCT 60.107 55.000 19.95 0.00 0.00 3.32
2656 4070 0.457853 TTAGCTTTCGACAGCGCGAT 60.458 50.000 17.32 0.00 45.24 4.58
2719 4133 4.201910 CGTTTCCGCATATTTGAAGGATGT 60.202 41.667 2.68 0.00 33.24 3.06
2733 4147 3.091633 AGGATGTGGAGTTGAAATGGG 57.908 47.619 0.00 0.00 0.00 4.00
2734 4148 2.649312 AGGATGTGGAGTTGAAATGGGA 59.351 45.455 0.00 0.00 0.00 4.37
2749 4163 1.067295 TGGGACAGCCTTCATCTGTT 58.933 50.000 0.00 0.00 44.09 3.16
2750 4164 1.003580 TGGGACAGCCTTCATCTGTTC 59.996 52.381 0.00 0.00 44.09 3.18
2751 4165 1.743996 GGACAGCCTTCATCTGTTCC 58.256 55.000 0.00 0.00 44.09 3.62
2752 4166 1.363744 GACAGCCTTCATCTGTTCCG 58.636 55.000 0.00 0.00 44.09 4.30
2754 4168 0.392193 CAGCCTTCATCTGTTCCGCT 60.392 55.000 0.00 0.00 0.00 5.52
2756 4170 0.391661 GCCTTCATCTGTTCCGCTCA 60.392 55.000 0.00 0.00 0.00 4.26
2757 4171 1.649664 CCTTCATCTGTTCCGCTCAG 58.350 55.000 0.00 0.00 0.00 3.35
2758 4172 1.649664 CTTCATCTGTTCCGCTCAGG 58.350 55.000 0.00 0.00 42.97 3.86
2775 4191 1.702957 CAGGTGGGAGGGTAGTTTCAA 59.297 52.381 0.00 0.00 0.00 2.69
2793 4209 2.517402 CTCCCTCCTCGTCCTCCG 60.517 72.222 0.00 0.00 38.13 4.63
2795 4211 4.444081 CCCTCCTCGTCCTCCGGT 62.444 72.222 0.00 0.00 37.11 5.28
2806 4222 3.299977 CTCCGGTGTGACCCGTCA 61.300 66.667 0.00 0.00 46.66 4.35
2807 4223 2.602267 TCCGGTGTGACCCGTCAT 60.602 61.111 0.00 0.00 46.66 3.06
2810 4226 0.887387 CCGGTGTGACCCGTCATTTT 60.887 55.000 10.70 0.00 46.66 1.82
2811 4227 0.515564 CGGTGTGACCCGTCATTTTC 59.484 55.000 0.03 0.00 43.07 2.29
2812 4228 1.600023 GGTGTGACCCGTCATTTTCA 58.400 50.000 0.03 0.00 42.18 2.69
2813 4229 2.159382 GGTGTGACCCGTCATTTTCAT 58.841 47.619 0.03 0.00 42.18 2.57
2815 4231 2.161609 GTGTGACCCGTCATTTTCATCC 59.838 50.000 0.03 0.00 42.18 3.51
2817 4233 1.002659 TGACCCGTCATTTTCATCCGT 59.997 47.619 0.00 0.00 34.14 4.69
2822 4238 3.874543 CCCGTCATTTTCATCCGTCAATA 59.125 43.478 0.00 0.00 0.00 1.90
2875 4291 5.691305 CACAAAGTGTGTCAATTAATGGTGG 59.309 40.000 0.09 0.00 43.08 4.61
2879 4295 3.078097 TGTGTCAATTAATGGTGGTCGG 58.922 45.455 0.00 0.00 0.00 4.79
2880 4296 3.078837 GTGTCAATTAATGGTGGTCGGT 58.921 45.455 0.00 0.00 0.00 4.69
2881 4297 3.504520 GTGTCAATTAATGGTGGTCGGTT 59.495 43.478 0.00 0.00 0.00 4.44
2882 4298 3.504134 TGTCAATTAATGGTGGTCGGTTG 59.496 43.478 0.00 0.00 0.00 3.77
2883 4299 2.490115 TCAATTAATGGTGGTCGGTTGC 59.510 45.455 0.00 0.00 0.00 4.17
2884 4300 1.091537 ATTAATGGTGGTCGGTTGCG 58.908 50.000 0.00 0.00 0.00 4.85
2885 4301 0.250381 TTAATGGTGGTCGGTTGCGT 60.250 50.000 0.00 0.00 0.00 5.24
2886 4302 0.951525 TAATGGTGGTCGGTTGCGTG 60.952 55.000 0.00 0.00 0.00 5.34
2891 4307 3.361977 GGTCGGTTGCGTGCCAAT 61.362 61.111 0.00 0.00 35.55 3.16
2897 4313 4.354939 TTGCGTGCCAATTGCCCG 62.355 61.111 0.00 2.71 44.20 6.13
2908 4331 2.416701 CCAATTGCCCGTGTCCATTAAC 60.417 50.000 0.00 0.00 0.00 2.01
2913 4336 2.297701 GCCCGTGTCCATTAACATCAT 58.702 47.619 0.00 0.00 0.00 2.45
2932 4355 8.464770 ACATCATGTTTTCAACCATATTTTCG 57.535 30.769 0.00 0.00 0.00 3.46
2933 4356 7.545265 ACATCATGTTTTCAACCATATTTTCGG 59.455 33.333 0.00 0.00 0.00 4.30
2957 4380 2.331098 CGCCACTCTTTTTGCGCA 59.669 55.556 5.66 5.66 40.58 6.09
2959 4382 0.664166 CGCCACTCTTTTTGCGCAAT 60.664 50.000 25.64 4.45 40.58 3.56
2963 4386 0.951558 ACTCTTTTTGCGCAATCCGT 59.048 45.000 25.64 13.64 39.71 4.69
2991 4414 1.871039 GGCTACAAAAAGACTGTCGCA 59.129 47.619 1.52 0.00 37.25 5.10
3035 4458 1.067060 CAGTTCTCGTATCGATGGCCA 59.933 52.381 8.56 8.56 34.61 5.36
3050 4473 1.214424 TGGCCAAATAGCTCTTACCCC 59.786 52.381 0.61 0.00 0.00 4.95
3091 4514 0.035036 CCTCTCATCATCGCCATGCT 59.965 55.000 0.00 0.00 0.00 3.79
3102 4525 1.870055 CGCCATGCTGCTTCCTTGTT 61.870 55.000 0.00 0.00 0.00 2.83
3106 4529 1.536766 CATGCTGCTTCCTTGTTCGAA 59.463 47.619 0.00 0.00 0.00 3.71
3110 4533 2.213499 CTGCTTCCTTGTTCGAACTGT 58.787 47.619 27.32 0.00 0.00 3.55
3122 4545 1.278172 CGAACTGTGTGCCACTCTCG 61.278 60.000 0.00 0.00 35.11 4.04
3123 4546 0.946221 GAACTGTGTGCCACTCTCGG 60.946 60.000 0.00 0.00 35.11 4.63
3127 4550 2.525629 TGTGCCACTCTCGGGGAA 60.526 61.111 0.00 0.00 0.00 3.97
3133 4556 1.267121 CCACTCTCGGGGAAGAAGAA 58.733 55.000 0.00 0.00 0.00 2.52
3134 4557 1.066787 CCACTCTCGGGGAAGAAGAAC 60.067 57.143 0.00 0.00 0.00 3.01
3159 4582 0.680061 GAGGTGACGACAAAGGAGGT 59.320 55.000 0.00 0.00 0.00 3.85
3164 4587 4.261888 CGACAAAGGAGGTGGTCG 57.738 61.111 0.00 0.00 45.62 4.79
3182 4605 1.758514 GACCTCATCGCCCAGGAGA 60.759 63.158 0.00 0.00 33.52 3.71
3195 4618 1.062581 CCAGGAGAAGGAGGAGGATCA 60.063 57.143 0.00 0.00 36.25 2.92
3204 4627 4.375313 AAGGAGGAGGATCACCTTTACAT 58.625 43.478 11.16 0.00 45.95 2.29
3228 4651 1.433121 GAGGCCATGAAGGAGGATCT 58.567 55.000 5.01 0.00 41.22 2.75
3269 4692 6.270096 CGGATTAGAATACGAAAACAGACC 57.730 41.667 0.29 0.00 45.50 3.85
3281 4704 1.348064 AACAGACCCCATCGAGTTCA 58.652 50.000 0.00 0.00 0.00 3.18
3293 4716 2.881441 GAGTTCAACTCGCACGACA 58.119 52.632 0.65 0.00 35.28 4.35
3302 4725 1.205485 CTCGCACGACAGCTATGAGC 61.205 60.000 0.00 0.00 42.84 4.26
3311 4734 2.818132 GCTATGAGCTGAGCCCGT 59.182 61.111 0.00 0.00 38.45 5.28
3312 4735 1.300542 GCTATGAGCTGAGCCCGTC 60.301 63.158 0.00 0.00 38.45 4.79
3313 4736 1.743321 GCTATGAGCTGAGCCCGTCT 61.743 60.000 0.00 0.00 38.45 4.18
3314 4737 0.031857 CTATGAGCTGAGCCCGTCTG 59.968 60.000 0.00 0.00 0.00 3.51
3315 4738 0.395724 TATGAGCTGAGCCCGTCTGA 60.396 55.000 0.00 0.00 0.00 3.27
3317 4740 3.363844 GAGCTGAGCCCGTCTGACC 62.364 68.421 0.00 0.00 0.00 4.02
3318 4741 3.695606 GCTGAGCCCGTCTGACCA 61.696 66.667 1.55 0.00 0.00 4.02
3319 4742 2.575993 CTGAGCCCGTCTGACCAG 59.424 66.667 1.55 0.00 0.00 4.00
3320 4743 2.997315 TGAGCCCGTCTGACCAGG 60.997 66.667 1.55 4.74 0.00 4.45
3321 4744 2.680352 GAGCCCGTCTGACCAGGA 60.680 66.667 14.04 0.00 0.00 3.86
3322 4745 2.681778 AGCCCGTCTGACCAGGAG 60.682 66.667 14.04 2.10 0.00 3.69
3323 4746 2.680352 GCCCGTCTGACCAGGAGA 60.680 66.667 14.04 0.00 0.00 3.71
3324 4747 2.716017 GCCCGTCTGACCAGGAGAG 61.716 68.421 14.04 0.00 0.00 3.20
3325 4748 2.716017 CCCGTCTGACCAGGAGAGC 61.716 68.421 1.55 0.00 0.00 4.09
3326 4749 2.487428 CGTCTGACCAGGAGAGCG 59.513 66.667 1.55 0.00 0.00 5.03
3327 4750 2.183046 GTCTGACCAGGAGAGCGC 59.817 66.667 0.00 0.00 0.00 5.92
3328 4751 2.036414 TCTGACCAGGAGAGCGCT 59.964 61.111 11.27 11.27 0.00 5.92
3329 4752 1.607756 TCTGACCAGGAGAGCGCTT 60.608 57.895 13.26 0.58 0.00 4.68
3330 4753 1.447489 CTGACCAGGAGAGCGCTTG 60.447 63.158 13.26 5.42 0.00 4.01
3331 4754 2.817396 GACCAGGAGAGCGCTTGC 60.817 66.667 13.26 6.64 39.58 4.01
3332 4755 4.400961 ACCAGGAGAGCGCTTGCC 62.401 66.667 13.26 16.64 40.41 4.52
3334 4757 4.399395 CAGGAGAGCGCTTGCCCA 62.399 66.667 21.49 0.00 40.41 5.36
3335 4758 4.400961 AGGAGAGCGCTTGCCCAC 62.401 66.667 21.49 4.75 40.41 4.61
3336 4759 4.704833 GGAGAGCGCTTGCCCACA 62.705 66.667 13.26 0.00 40.41 4.17
3337 4760 3.426568 GAGAGCGCTTGCCCACAC 61.427 66.667 13.26 0.00 40.41 3.82
3338 4761 4.254709 AGAGCGCTTGCCCACACA 62.255 61.111 13.26 0.00 40.41 3.72
3339 4762 3.730761 GAGCGCTTGCCCACACAG 61.731 66.667 13.26 0.00 40.41 3.66
3342 4765 3.730761 CGCTTGCCCACACAGCTC 61.731 66.667 0.00 0.00 31.67 4.09
3343 4766 2.595463 GCTTGCCCACACAGCTCA 60.595 61.111 0.00 0.00 31.38 4.26
3344 4767 1.975407 GCTTGCCCACACAGCTCAT 60.975 57.895 0.00 0.00 31.38 2.90
3345 4768 0.677731 GCTTGCCCACACAGCTCATA 60.678 55.000 0.00 0.00 31.38 2.15
3346 4769 2.020694 GCTTGCCCACACAGCTCATAT 61.021 52.381 0.00 0.00 31.38 1.78
3347 4770 1.945394 CTTGCCCACACAGCTCATATC 59.055 52.381 0.00 0.00 0.00 1.63
3348 4771 0.179076 TGCCCACACAGCTCATATCG 60.179 55.000 0.00 0.00 0.00 2.92
3349 4772 0.104855 GCCCACACAGCTCATATCGA 59.895 55.000 0.00 0.00 0.00 3.59
3350 4773 1.858091 CCCACACAGCTCATATCGAC 58.142 55.000 0.00 0.00 0.00 4.20
3351 4774 1.539065 CCCACACAGCTCATATCGACC 60.539 57.143 0.00 0.00 0.00 4.79
3352 4775 1.136891 CCACACAGCTCATATCGACCA 59.863 52.381 0.00 0.00 0.00 4.02
3353 4776 2.196749 CACACAGCTCATATCGACCAC 58.803 52.381 0.00 0.00 0.00 4.16
3354 4777 1.824852 ACACAGCTCATATCGACCACA 59.175 47.619 0.00 0.00 0.00 4.17
3355 4778 2.233676 ACACAGCTCATATCGACCACAA 59.766 45.455 0.00 0.00 0.00 3.33
3356 4779 2.604914 CACAGCTCATATCGACCACAAC 59.395 50.000 0.00 0.00 0.00 3.32
3357 4780 1.854743 CAGCTCATATCGACCACAACG 59.145 52.381 0.00 0.00 0.00 4.10
3358 4781 1.476891 AGCTCATATCGACCACAACGT 59.523 47.619 0.00 0.00 0.00 3.99
3359 4782 1.588404 GCTCATATCGACCACAACGTG 59.412 52.381 0.00 0.00 0.00 4.49
3360 4783 1.588404 CTCATATCGACCACAACGTGC 59.412 52.381 0.00 0.00 31.34 5.34
3361 4784 1.203758 TCATATCGACCACAACGTGCT 59.796 47.619 0.00 0.00 31.34 4.40
3362 4785 1.588404 CATATCGACCACAACGTGCTC 59.412 52.381 0.00 0.00 31.34 4.26
3363 4786 0.108992 TATCGACCACAACGTGCTCC 60.109 55.000 0.00 0.00 31.34 4.70
3364 4787 2.781595 ATCGACCACAACGTGCTCCC 62.782 60.000 0.00 0.00 31.34 4.30
3365 4788 2.668550 GACCACAACGTGCTCCCC 60.669 66.667 0.00 0.00 31.34 4.81
3366 4789 3.168528 ACCACAACGTGCTCCCCT 61.169 61.111 0.00 0.00 31.34 4.79
3367 4790 2.113139 CCACAACGTGCTCCCCTT 59.887 61.111 0.00 0.00 31.34 3.95
3368 4791 1.966451 CCACAACGTGCTCCCCTTC 60.966 63.158 0.00 0.00 31.34 3.46
3369 4792 1.227823 CACAACGTGCTCCCCTTCA 60.228 57.895 0.00 0.00 0.00 3.02
3370 4793 1.227853 ACAACGTGCTCCCCTTCAC 60.228 57.895 0.00 0.00 0.00 3.18
3371 4794 1.966451 CAACGTGCTCCCCTTCACC 60.966 63.158 0.00 0.00 0.00 4.02
3372 4795 2.147387 AACGTGCTCCCCTTCACCT 61.147 57.895 0.00 0.00 0.00 4.00
3373 4796 2.113243 AACGTGCTCCCCTTCACCTC 62.113 60.000 0.00 0.00 0.00 3.85
3374 4797 2.583441 CGTGCTCCCCTTCACCTCA 61.583 63.158 0.00 0.00 0.00 3.86
3375 4798 1.003233 GTGCTCCCCTTCACCTCAC 60.003 63.158 0.00 0.00 0.00 3.51
3376 4799 1.152030 TGCTCCCCTTCACCTCACT 60.152 57.895 0.00 0.00 0.00 3.41
3377 4800 1.298014 GCTCCCCTTCACCTCACTG 59.702 63.158 0.00 0.00 0.00 3.66
3378 4801 1.484444 GCTCCCCTTCACCTCACTGT 61.484 60.000 0.00 0.00 0.00 3.55
3379 4802 0.322975 CTCCCCTTCACCTCACTGTG 59.677 60.000 0.17 0.17 37.59 3.66
3398 4821 1.307097 GAAGGAGGCATGTGATGAGC 58.693 55.000 0.00 0.00 0.00 4.26
3403 4826 0.179073 AGGCATGTGATGAGCGGTAC 60.179 55.000 0.00 0.00 0.00 3.34
3425 4848 1.147153 GCCTACACCTCAGCCATCC 59.853 63.158 0.00 0.00 0.00 3.51
3426 4849 1.626356 GCCTACACCTCAGCCATCCA 61.626 60.000 0.00 0.00 0.00 3.41
3427 4850 0.179000 CCTACACCTCAGCCATCCAC 59.821 60.000 0.00 0.00 0.00 4.02
3431 4854 2.693864 CCTCAGCCATCCACCCCT 60.694 66.667 0.00 0.00 0.00 4.79
3452 4875 2.682856 TGGCGAAATCTTCAAGCATACC 59.317 45.455 0.00 0.00 0.00 2.73
3458 4881 0.392461 TCTTCAAGCATACCGCCACC 60.392 55.000 0.00 0.00 44.04 4.61
3459 4882 0.676466 CTTCAAGCATACCGCCACCA 60.676 55.000 0.00 0.00 44.04 4.17
3519 4945 1.063183 AGGAGAAGCAGGCAGACTTT 58.937 50.000 0.00 0.00 0.00 2.66
3624 5056 2.094545 GCATTCCTCTTGAAAATGCCGT 60.095 45.455 14.40 0.00 45.99 5.68
3626 5058 2.859165 TCCTCTTGAAAATGCCGTCT 57.141 45.000 0.00 0.00 0.00 4.18
3663 5096 3.375699 ACAGGTAGGAACGGATGAAGAT 58.624 45.455 0.00 0.00 0.00 2.40
3669 5102 3.643237 AGGAACGGATGAAGATGAGGTA 58.357 45.455 0.00 0.00 0.00 3.08
3670 5103 3.639094 AGGAACGGATGAAGATGAGGTAG 59.361 47.826 0.00 0.00 0.00 3.18
3685 5118 3.702048 TAGCTGGACCGGCACACC 61.702 66.667 27.11 0.25 38.37 4.16
3698 5131 1.146930 CACACCGCCATGCCTAGAT 59.853 57.895 0.00 0.00 0.00 1.98
3725 5158 2.607038 GGCGAGTCGTCACATATGCATA 60.607 50.000 13.24 9.27 0.00 3.14
3747 5180 1.915614 CTCCGTGCACTGCATTCACC 61.916 60.000 16.19 0.00 41.91 4.02
3867 5300 6.311445 CCGTTAGGAATGCATCAGATGTATAC 59.689 42.308 13.81 10.27 41.02 1.47
3902 5339 5.713025 CAACCGAGAAAACATGATGGAATT 58.287 37.500 0.00 0.00 0.00 2.17
3974 5411 3.243068 GCAATTACGCAATTAGGAGGGTG 60.243 47.826 0.00 0.00 32.96 4.61
4017 5454 5.105756 ACAAGATGTATGGCCTGCTTTAAAC 60.106 40.000 3.32 0.00 0.00 2.01
4052 5489 9.216117 AGATCAACAATACTTGTGTTTAGTACC 57.784 33.333 0.00 0.00 44.59 3.34
4057 5494 7.686434 ACAATACTTGTGTTTAGTACCTCCAT 58.314 34.615 0.00 0.00 43.48 3.41
4108 5940 0.244994 ACTAGGCGAGCTGTGACTTG 59.755 55.000 0.00 0.00 0.00 3.16
4116 5949 1.405105 GAGCTGTGACTTGTTTTGGCA 59.595 47.619 0.00 0.00 0.00 4.92
4117 5950 1.134946 AGCTGTGACTTGTTTTGGCAC 59.865 47.619 0.00 0.00 0.00 5.01
4188 6029 8.132362 GGAAGTGTATTTTGTTGACACATGTAA 58.868 33.333 0.00 0.00 44.77 2.41
4399 6240 2.776913 CCTCTCCGTCTTCTCCGCC 61.777 68.421 0.00 0.00 0.00 6.13
4405 6246 4.208686 GTCTTCTCCGCCCGCGAT 62.209 66.667 8.23 0.00 42.83 4.58
4480 6321 2.820178 TCAAGTCAGACAGGCCTCATA 58.180 47.619 0.00 0.00 0.00 2.15
4485 6329 4.353777 AGTCAGACAGGCCTCATAAGTAA 58.646 43.478 0.00 0.00 0.00 2.24
4503 6347 8.834465 CATAAGTAAAAATGAGATGACCAGAGG 58.166 37.037 0.00 0.00 0.00 3.69
4530 6374 3.433740 GCGGGAGATGATTAGGTTCCTTT 60.434 47.826 0.00 0.00 0.00 3.11
4576 6420 0.601558 TAGGTCGCAAGGTCTGACAC 59.398 55.000 10.38 0.00 34.32 3.67
4581 6425 0.952497 CGCAAGGTCTGACACTGCAT 60.952 55.000 24.12 0.62 0.00 3.96
4582 6426 1.672737 CGCAAGGTCTGACACTGCATA 60.673 52.381 24.12 0.00 0.00 3.14
4648 6496 6.515832 AGAACAGGCAAAGAAAATTAAGTGG 58.484 36.000 0.00 0.00 0.00 4.00
4652 6500 4.220602 AGGCAAAGAAAATTAAGTGGCGAT 59.779 37.500 0.00 0.00 36.72 4.58
4708 6556 6.140265 GTCGTTTTTCTTTTCAAGGAATCGAC 59.860 38.462 14.29 14.29 38.42 4.20
4709 6557 5.398416 CGTTTTTCTTTTCAAGGAATCGACC 59.602 40.000 0.00 0.00 0.00 4.79
4735 6583 2.559252 GGTGGGGGTAGAGTACAAGACT 60.559 54.545 0.00 0.00 42.90 3.24
4802 7018 7.013942 CCATATCTTCCAAAGAATGAGCATGAA 59.986 37.037 0.00 0.00 41.63 2.57
4810 7026 6.127703 CCAAAGAATGAGCATGAAGATGAAGT 60.128 38.462 0.00 0.00 0.00 3.01
4812 7028 7.463961 AAGAATGAGCATGAAGATGAAGTTT 57.536 32.000 0.00 0.00 0.00 2.66
4813 7029 7.463961 AGAATGAGCATGAAGATGAAGTTTT 57.536 32.000 0.00 0.00 0.00 2.43
4814 7030 7.893658 AGAATGAGCATGAAGATGAAGTTTTT 58.106 30.769 0.00 0.00 0.00 1.94
4840 7056 7.856145 TTTTTGAAGATAGAGGATGAAGCTC 57.144 36.000 0.00 0.00 0.00 4.09
4842 7058 4.550669 TGAAGATAGAGGATGAAGCTCCA 58.449 43.478 0.00 0.00 37.81 3.86
4843 7059 4.964897 TGAAGATAGAGGATGAAGCTCCAA 59.035 41.667 0.00 0.00 37.81 3.53
4883 7108 0.105453 GGTGGAGAGATCCCTAGGCA 60.105 60.000 2.05 0.00 0.00 4.75
4954 7179 5.598417 GGCCATTAGTTAGGGTCATCAAAAT 59.402 40.000 0.00 0.00 0.00 1.82
4991 7216 1.892474 TGCTCTGTTTATTGGGTTGCC 59.108 47.619 0.00 0.00 0.00 4.52
5009 7234 2.288948 TGCCAGTTCAACCAAATGATGC 60.289 45.455 0.00 0.00 31.29 3.91
5022 7247 1.033746 ATGATGCGTGCCAAAGGGAG 61.034 55.000 0.00 0.00 35.59 4.30
5023 7248 2.361610 ATGCGTGCCAAAGGGAGG 60.362 61.111 0.00 0.00 35.59 4.30
5024 7249 3.944250 ATGCGTGCCAAAGGGAGGG 62.944 63.158 0.00 0.00 35.59 4.30
5025 7250 4.344865 GCGTGCCAAAGGGAGGGA 62.345 66.667 0.00 0.00 35.59 4.20
5026 7251 2.434331 CGTGCCAAAGGGAGGGAA 59.566 61.111 0.00 0.00 35.59 3.97
5078 7303 3.483574 GCATGTATGTTCTGCACACGTAC 60.484 47.826 13.50 13.50 38.61 3.67
5082 7307 2.248280 TGTTCTGCACACGTACCAAT 57.752 45.000 0.00 0.00 0.00 3.16
5299 7525 5.474578 AGAACTGCTGATTCTTAGTGTGA 57.525 39.130 0.00 0.00 32.32 3.58
5306 7532 5.128919 GCTGATTCTTAGTGTGATGGGAAT 58.871 41.667 0.00 0.00 0.00 3.01
5313 7539 7.016153 TCTTAGTGTGATGGGAATTTAGTGT 57.984 36.000 0.00 0.00 0.00 3.55
5314 7540 6.878923 TCTTAGTGTGATGGGAATTTAGTGTG 59.121 38.462 0.00 0.00 0.00 3.82
5315 7541 4.985538 AGTGTGATGGGAATTTAGTGTGT 58.014 39.130 0.00 0.00 0.00 3.72
5316 7542 6.121776 AGTGTGATGGGAATTTAGTGTGTA 57.878 37.500 0.00 0.00 0.00 2.90
5317 7543 5.938125 AGTGTGATGGGAATTTAGTGTGTAC 59.062 40.000 0.00 0.00 0.00 2.90
5318 7544 5.703592 GTGTGATGGGAATTTAGTGTGTACA 59.296 40.000 0.00 0.00 0.00 2.90
5319 7545 5.703592 TGTGATGGGAATTTAGTGTGTACAC 59.296 40.000 19.36 19.36 46.77 2.90
5364 7590 8.816640 AAATGTAAAAATGTGCTTAACTGAGG 57.183 30.769 0.00 0.00 0.00 3.86
5365 7591 6.952773 TGTAAAAATGTGCTTAACTGAGGT 57.047 33.333 0.00 0.00 0.00 3.85
5366 7592 6.966021 TGTAAAAATGTGCTTAACTGAGGTC 58.034 36.000 0.00 0.00 0.00 3.85
5367 7593 6.770785 TGTAAAAATGTGCTTAACTGAGGTCT 59.229 34.615 0.00 0.00 0.00 3.85
5368 7594 7.934665 TGTAAAAATGTGCTTAACTGAGGTCTA 59.065 33.333 0.00 0.00 0.00 2.59
5369 7595 6.803154 AAAATGTGCTTAACTGAGGTCTAC 57.197 37.500 0.00 0.00 0.00 2.59
5370 7596 3.570926 TGTGCTTAACTGAGGTCTACG 57.429 47.619 0.00 0.00 0.00 3.51
5371 7597 2.260481 GTGCTTAACTGAGGTCTACGC 58.740 52.381 0.00 0.00 0.00 4.42
5372 7598 1.135489 TGCTTAACTGAGGTCTACGCG 60.135 52.381 3.53 3.53 0.00 6.01
5373 7599 1.135460 GCTTAACTGAGGTCTACGCGT 60.135 52.381 19.17 19.17 0.00 6.01
5374 7600 2.783333 CTTAACTGAGGTCTACGCGTC 58.217 52.381 18.63 0.00 0.00 5.19
5375 7601 1.812235 TAACTGAGGTCTACGCGTCA 58.188 50.000 18.63 5.26 0.00 4.35
5376 7602 1.174783 AACTGAGGTCTACGCGTCAT 58.825 50.000 18.63 0.00 33.58 3.06
5377 7603 0.733729 ACTGAGGTCTACGCGTCATC 59.266 55.000 18.63 9.91 33.58 2.92
5378 7604 0.316278 CTGAGGTCTACGCGTCATCG 60.316 60.000 18.63 2.83 40.37 3.84
5379 7605 1.009900 GAGGTCTACGCGTCATCGG 60.010 63.158 18.63 2.11 37.56 4.18
5380 7606 1.712977 GAGGTCTACGCGTCATCGGT 61.713 60.000 18.63 0.00 37.56 4.69
5381 7607 1.585521 GGTCTACGCGTCATCGGTG 60.586 63.158 18.63 0.00 37.56 4.94
5382 7608 1.585521 GTCTACGCGTCATCGGTGG 60.586 63.158 18.63 0.00 37.56 4.61
5383 7609 2.042259 TCTACGCGTCATCGGTGGT 61.042 57.895 18.63 0.00 37.56 4.16
5384 7610 1.872234 CTACGCGTCATCGGTGGTG 60.872 63.158 18.63 0.00 37.56 4.17
5385 7611 3.975083 TACGCGTCATCGGTGGTGC 62.975 63.158 18.63 0.00 37.56 5.01
5387 7613 3.788766 GCGTCATCGGTGGTGCAC 61.789 66.667 8.80 8.80 37.56 4.57
5388 7614 2.356913 CGTCATCGGTGGTGCACA 60.357 61.111 20.43 1.62 35.86 4.57
5402 7628 2.168521 GGTGCACACCTTAGAGCATCTA 59.831 50.000 20.43 0.00 46.57 1.98
5403 7629 3.985445 GGTGCACACCTTAGAGCATCTAC 60.985 52.174 20.43 0.00 46.57 2.59
5404 7630 6.422502 GGTGCACACCTTAGAGCATCTACA 62.423 50.000 20.43 0.00 46.57 2.74
5411 7637 4.453093 GAGCATCTACAGGCAGGC 57.547 61.111 0.00 0.00 0.00 4.85
5412 7638 1.524002 GAGCATCTACAGGCAGGCA 59.476 57.895 0.00 0.00 0.00 4.75
5413 7639 0.813210 GAGCATCTACAGGCAGGCAC 60.813 60.000 0.00 0.00 0.00 5.01
5414 7640 1.821332 GCATCTACAGGCAGGCACC 60.821 63.158 0.00 0.00 0.00 5.01
5415 7641 1.153086 CATCTACAGGCAGGCACCC 60.153 63.158 0.00 0.00 0.00 4.61
5416 7642 1.307343 ATCTACAGGCAGGCACCCT 60.307 57.895 0.00 0.00 0.00 4.34
5417 7643 0.031111 ATCTACAGGCAGGCACCCTA 60.031 55.000 0.00 0.00 29.64 3.53
5418 7644 0.252513 TCTACAGGCAGGCACCCTAA 60.253 55.000 0.00 0.00 29.64 2.69
5419 7645 0.618458 CTACAGGCAGGCACCCTAAA 59.382 55.000 0.00 0.00 29.64 1.85
5420 7646 0.326927 TACAGGCAGGCACCCTAAAC 59.673 55.000 0.00 0.00 29.64 2.01
5421 7647 1.678970 CAGGCAGGCACCCTAAACC 60.679 63.158 0.00 0.00 29.64 3.27
5422 7648 2.750237 GGCAGGCACCCTAAACCG 60.750 66.667 0.00 0.00 29.64 4.44
5423 7649 2.750237 GCAGGCACCCTAAACCGG 60.750 66.667 0.00 0.00 29.64 5.28
5424 7650 2.750237 CAGGCACCCTAAACCGGC 60.750 66.667 0.00 0.00 29.64 6.13
5425 7651 4.043100 AGGCACCCTAAACCGGCC 62.043 66.667 0.00 0.00 44.92 6.13
5426 7652 4.043100 GGCACCCTAAACCGGCCT 62.043 66.667 0.00 0.00 41.39 5.19
5427 7653 2.437895 GCACCCTAAACCGGCCTC 60.438 66.667 0.00 0.00 0.00 4.70
5428 7654 3.074281 CACCCTAAACCGGCCTCA 58.926 61.111 0.00 0.00 0.00 3.86
5429 7655 1.377229 CACCCTAAACCGGCCTCAA 59.623 57.895 0.00 0.00 0.00 3.02
5430 7656 0.250989 CACCCTAAACCGGCCTCAAA 60.251 55.000 0.00 0.00 0.00 2.69
5431 7657 0.251033 ACCCTAAACCGGCCTCAAAC 60.251 55.000 0.00 0.00 0.00 2.93
5432 7658 1.303091 CCCTAAACCGGCCTCAAACG 61.303 60.000 0.00 0.00 0.00 3.60
5433 7659 1.500396 CTAAACCGGCCTCAAACGC 59.500 57.895 0.00 0.00 0.00 4.84
5434 7660 0.953960 CTAAACCGGCCTCAAACGCT 60.954 55.000 0.00 0.00 0.00 5.07
5435 7661 0.952010 TAAACCGGCCTCAAACGCTC 60.952 55.000 0.00 0.00 0.00 5.03
5455 7681 4.778143 GCGGCCCGTCTGGTCATT 62.778 66.667 4.45 0.00 39.41 2.57
5456 7682 2.819595 CGGCCCGTCTGGTCATTG 60.820 66.667 0.00 0.00 39.41 2.82
5457 7683 2.668632 GGCCCGTCTGGTCATTGA 59.331 61.111 0.00 0.00 39.18 2.57
5458 7684 1.745489 GGCCCGTCTGGTCATTGAC 60.745 63.158 8.34 8.34 39.18 3.18
5467 7693 3.853104 GGTCATTGACCGGTCATGA 57.147 52.632 36.52 32.43 43.14 3.07
5468 7694 2.332063 GGTCATTGACCGGTCATGAT 57.668 50.000 36.52 25.19 43.14 2.45
5469 7695 2.643551 GGTCATTGACCGGTCATGATT 58.356 47.619 36.52 19.18 43.14 2.57
5470 7696 3.016736 GGTCATTGACCGGTCATGATTT 58.983 45.455 36.52 16.77 43.14 2.17
5471 7697 3.443681 GGTCATTGACCGGTCATGATTTT 59.556 43.478 36.52 15.07 43.14 1.82
5472 7698 4.082245 GGTCATTGACCGGTCATGATTTTT 60.082 41.667 36.52 13.40 43.14 1.94
5473 7699 5.095490 GTCATTGACCGGTCATGATTTTTC 58.905 41.667 36.52 22.07 39.64 2.29
5474 7700 3.822594 TTGACCGGTCATGATTTTTCG 57.177 42.857 36.52 0.00 39.64 3.46
5475 7701 3.046968 TGACCGGTCATGATTTTTCGA 57.953 42.857 33.23 5.92 34.14 3.71
5476 7702 2.739913 TGACCGGTCATGATTTTTCGAC 59.260 45.455 33.23 2.93 34.14 4.20
5477 7703 2.081462 ACCGGTCATGATTTTTCGACC 58.919 47.619 0.00 0.00 43.73 4.79
5478 7704 1.400494 CCGGTCATGATTTTTCGACCC 59.600 52.381 0.00 0.00 44.20 4.46
5479 7705 2.080693 CGGTCATGATTTTTCGACCCA 58.919 47.619 0.00 0.00 44.20 4.51
5480 7706 2.095853 CGGTCATGATTTTTCGACCCAG 59.904 50.000 0.00 0.00 44.20 4.45
5481 7707 3.343617 GGTCATGATTTTTCGACCCAGA 58.656 45.455 0.00 0.00 41.77 3.86
5482 7708 3.127030 GGTCATGATTTTTCGACCCAGAC 59.873 47.826 0.00 0.00 41.77 3.51
5483 7709 3.000041 TCATGATTTTTCGACCCAGACG 59.000 45.455 0.00 0.00 0.00 4.18
5484 7710 1.803334 TGATTTTTCGACCCAGACGG 58.197 50.000 0.00 0.00 37.81 4.79
5485 7711 0.446616 GATTTTTCGACCCAGACGGC 59.553 55.000 0.00 0.00 33.26 5.68
5486 7712 0.958876 ATTTTTCGACCCAGACGGCC 60.959 55.000 0.00 0.00 33.26 6.13
5487 7713 3.540367 TTTTCGACCCAGACGGCCC 62.540 63.158 0.00 0.00 33.26 5.80
5494 7720 3.646715 CCAGACGGCCCCCTCAAA 61.647 66.667 0.00 0.00 0.00 2.69
5495 7721 2.359975 CAGACGGCCCCCTCAAAC 60.360 66.667 0.00 0.00 0.00 2.93
5496 7722 4.016706 AGACGGCCCCCTCAAACG 62.017 66.667 0.00 0.00 0.00 3.60
5502 7728 4.426313 CCCCCTCAAACGGGCCTC 62.426 72.222 0.84 0.00 43.25 4.70
5503 7729 3.646715 CCCCTCAAACGGGCCTCA 61.647 66.667 0.84 0.00 43.25 3.86
5504 7730 2.434331 CCCTCAAACGGGCCTCAA 59.566 61.111 0.84 0.00 37.41 3.02
5505 7731 1.228429 CCCTCAAACGGGCCTCAAA 60.228 57.895 0.84 0.00 37.41 2.69
5506 7732 1.524008 CCCTCAAACGGGCCTCAAAC 61.524 60.000 0.84 0.00 37.41 2.93
5507 7733 1.574428 CTCAAACGGGCCTCAAACG 59.426 57.895 0.84 0.00 0.00 3.60
5508 7734 2.050442 CAAACGGGCCTCAAACGC 60.050 61.111 0.84 0.00 0.00 4.84
5509 7735 3.292159 AAACGGGCCTCAAACGCC 61.292 61.111 0.84 0.00 46.29 5.68
5510 7736 3.785122 AAACGGGCCTCAAACGCCT 62.785 57.895 0.84 0.00 46.24 5.52
5516 7742 3.058160 CCTCAAACGCCTGGGCTG 61.058 66.667 10.04 6.05 39.32 4.85
5517 7743 2.032528 CTCAAACGCCTGGGCTGA 59.967 61.111 10.04 6.03 39.32 4.26
5518 7744 2.281484 TCAAACGCCTGGGCTGAC 60.281 61.111 10.04 0.00 39.32 3.51
5519 7745 2.594303 CAAACGCCTGGGCTGACA 60.594 61.111 10.04 0.00 39.32 3.58
5520 7746 2.281761 AAACGCCTGGGCTGACAG 60.282 61.111 10.04 0.00 39.32 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 0.796927 GGCTCACAACTAAGCGAACC 59.203 55.000 0.00 0.00 39.47 3.62
70 71 5.880054 TGAAAATAGGCTCACAACTAAGC 57.120 39.130 0.00 0.00 37.80 3.09
84 85 8.302965 TCGAACTCATGAGCATATGAAAATAG 57.697 34.615 22.83 0.00 36.69 1.73
193 194 7.039011 TGTCCTGCGGATCTTTTATATAGTGAT 60.039 37.037 0.00 0.00 32.73 3.06
194 195 6.266786 TGTCCTGCGGATCTTTTATATAGTGA 59.733 38.462 0.00 0.00 32.73 3.41
195 196 6.455647 TGTCCTGCGGATCTTTTATATAGTG 58.544 40.000 0.00 0.00 32.73 2.74
196 197 6.665992 TGTCCTGCGGATCTTTTATATAGT 57.334 37.500 0.00 0.00 32.73 2.12
198 199 7.103641 GGATTGTCCTGCGGATCTTTTATATA 58.896 38.462 0.00 0.00 32.73 0.86
228 231 1.724148 TTTGTGCCACCTGGATCCCA 61.724 55.000 9.90 0.00 37.39 4.37
263 266 0.885196 ACAATTGTTACCGCCGCAAT 59.115 45.000 4.92 0.00 34.69 3.56
328 332 6.463049 GCATACAAGTGAGCTCTCCCTATTTA 60.463 42.308 16.19 1.85 0.00 1.40
330 334 4.202305 GCATACAAGTGAGCTCTCCCTATT 60.202 45.833 16.19 0.00 0.00 1.73
331 335 3.323403 GCATACAAGTGAGCTCTCCCTAT 59.677 47.826 16.19 3.83 0.00 2.57
398 402 1.629043 TCCGGATGGAGGTAGCATAC 58.371 55.000 0.00 0.00 40.17 2.39
428 432 4.151258 ACTTGATGATGTTGTTTCAGCG 57.849 40.909 0.00 0.00 32.26 5.18
441 445 2.761767 TCCGTCCGGAATTACTTGATGA 59.238 45.455 5.23 0.00 42.05 2.92
443 447 2.102588 CCTCCGTCCGGAATTACTTGAT 59.897 50.000 5.23 0.00 44.66 2.57
505 511 2.069273 ACAGTTGCTCTAATCACGTGC 58.931 47.619 11.67 0.00 0.00 5.34
524 530 4.576053 TCATCAGCCAATAATGCACTACAC 59.424 41.667 0.00 0.00 0.00 2.90
528 538 3.623703 TGTCATCAGCCAATAATGCACT 58.376 40.909 0.00 0.00 0.00 4.40
608 1185 2.230653 TGGGGCAGCTTTAGGCAGA 61.231 57.895 0.00 0.00 44.79 4.26
609 1186 2.048603 GTGGGGCAGCTTTAGGCAG 61.049 63.158 0.00 0.00 44.79 4.85
610 1187 2.035626 GTGGGGCAGCTTTAGGCA 59.964 61.111 0.00 0.00 44.79 4.75
611 1188 3.134127 CGTGGGGCAGCTTTAGGC 61.134 66.667 0.00 0.00 42.19 3.93
612 1189 2.438434 CCGTGGGGCAGCTTTAGG 60.438 66.667 0.00 0.00 0.00 2.69
613 1190 1.745489 GACCGTGGGGCAGCTTTAG 60.745 63.158 0.00 0.00 36.48 1.85
653 1233 6.942532 TGAATTTCATGGGCTTCACTATAC 57.057 37.500 0.00 0.00 0.00 1.47
734 1314 3.876320 GGTGCAAAAGGCTTGAAATGAAA 59.124 39.130 0.00 0.00 45.15 2.69
735 1315 3.465871 GGTGCAAAAGGCTTGAAATGAA 58.534 40.909 0.00 0.00 45.15 2.57
736 1316 2.545532 CGGTGCAAAAGGCTTGAAATGA 60.546 45.455 0.00 0.00 45.15 2.57
737 1317 1.794116 CGGTGCAAAAGGCTTGAAATG 59.206 47.619 0.00 0.00 45.15 2.32
738 1318 1.873486 GCGGTGCAAAAGGCTTGAAAT 60.873 47.619 0.00 0.00 45.15 2.17
746 1326 2.336088 CTGTGGCGGTGCAAAAGG 59.664 61.111 0.00 0.00 0.00 3.11
747 1327 2.355009 GCTGTGGCGGTGCAAAAG 60.355 61.111 0.00 0.00 0.00 2.27
853 1450 4.530857 CTCTTGCGGGGTAGCGGG 62.531 72.222 0.00 0.00 40.67 6.13
864 1461 3.542742 GGACGCGTACGCTCTTGC 61.543 66.667 34.69 21.08 45.53 4.01
865 1462 3.238241 CGGACGCGTACGCTCTTG 61.238 66.667 32.92 22.64 45.53 3.02
866 1463 3.657835 GACGGACGCGTACGCTCTT 62.658 63.158 41.36 24.25 45.53 2.85
867 1464 4.157958 GACGGACGCGTACGCTCT 62.158 66.667 41.36 24.66 45.53 4.09
878 1475 3.524648 TTTGTGGAGCCGGACGGAC 62.525 63.158 15.99 7.34 37.50 4.79
879 1476 3.234630 CTTTGTGGAGCCGGACGGA 62.235 63.158 15.99 0.00 37.50 4.69
880 1477 2.742372 CTTTGTGGAGCCGGACGG 60.742 66.667 5.05 6.35 38.57 4.79
881 1478 3.423154 GCTTTGTGGAGCCGGACG 61.423 66.667 5.05 0.00 36.66 4.79
882 1479 2.032681 AGCTTTGTGGAGCCGGAC 59.967 61.111 5.05 0.00 43.74 4.79
946 1554 4.154347 CTGGGTCTCTGCCTCGCC 62.154 72.222 0.00 0.00 0.00 5.54
1167 1775 2.363925 ACGTACCAGAGGGCCTCC 60.364 66.667 29.62 13.06 37.90 4.30
1208 1819 1.669760 CGGTGAAAGCTTGGCCGTA 60.670 57.895 21.25 0.00 37.87 4.02
1209 1820 2.748058 ATCGGTGAAAGCTTGGCCGT 62.748 55.000 25.49 15.69 42.62 5.68
1210 1821 1.982073 GATCGGTGAAAGCTTGGCCG 61.982 60.000 22.68 22.68 43.32 6.13
1211 1822 1.657751 GGATCGGTGAAAGCTTGGCC 61.658 60.000 0.00 0.00 0.00 5.36
1212 1823 0.678048 AGGATCGGTGAAAGCTTGGC 60.678 55.000 0.00 0.00 0.00 4.52
1266 1879 2.821366 GATCAGCACCCTGGCACG 60.821 66.667 0.00 0.00 39.61 5.34
1499 2121 1.059913 AGCTACAGGTTGCCTCTGTT 58.940 50.000 8.59 0.00 42.17 3.16
1504 2126 1.630369 TGATGAAGCTACAGGTTGCCT 59.370 47.619 0.00 0.00 35.69 4.75
1533 2163 1.032657 CCACGACTCTCCGGTGATCT 61.033 60.000 6.68 0.00 0.00 2.75
1805 2474 3.067742 TCGACAGAGAAAACGAAGGAAGT 59.932 43.478 0.00 0.00 0.00 3.01
1807 2476 3.378339 GTCGACAGAGAAAACGAAGGAA 58.622 45.455 11.55 0.00 36.57 3.36
1865 2537 0.032952 TGTCTCGGTTCAGTTTCCCG 59.967 55.000 0.00 0.00 43.03 5.14
1866 2538 1.797025 CTGTCTCGGTTCAGTTTCCC 58.203 55.000 0.00 0.00 0.00 3.97
1867 2539 1.149148 GCTGTCTCGGTTCAGTTTCC 58.851 55.000 0.00 0.00 34.57 3.13
1868 2540 1.149148 GGCTGTCTCGGTTCAGTTTC 58.851 55.000 0.00 0.00 34.57 2.78
1869 2541 0.759346 AGGCTGTCTCGGTTCAGTTT 59.241 50.000 0.00 0.00 34.57 2.66
1876 2567 1.004440 GAAGCAAGGCTGTCTCGGT 60.004 57.895 0.00 0.00 39.62 4.69
1894 2585 2.780643 CGACATGGAGTGCTTGCG 59.219 61.111 0.00 0.00 0.00 4.85
1940 2631 1.810151 CGTCGAAAAACCATGTCCCAT 59.190 47.619 0.00 0.00 0.00 4.00
1959 2650 2.120232 GTAGGCGTGATTCATCAGACG 58.880 52.381 0.00 0.00 37.51 4.18
1960 2651 3.181486 TGAGTAGGCGTGATTCATCAGAC 60.181 47.826 0.00 0.00 37.51 3.51
2018 2710 1.715585 GACATGTCGTGCCGGATTG 59.284 57.895 10.69 0.00 0.00 2.67
2030 2722 1.667830 CCGTTCAGTGCCGACATGT 60.668 57.895 0.00 0.00 0.00 3.21
2073 2778 3.138304 GGAATTATGTATGGCGAGCACA 58.862 45.455 0.00 0.00 0.00 4.57
2074 2779 2.157668 CGGAATTATGTATGGCGAGCAC 59.842 50.000 0.00 0.00 0.00 4.40
2125 3150 1.204146 ACCGCATGAGTTATGACCCT 58.796 50.000 0.00 0.00 39.21 4.34
2224 3249 3.046968 TGTATTCTGCTGTTGCCGTTA 57.953 42.857 0.00 0.00 38.71 3.18
2238 3263 6.663944 ACGGAAGTTGCTCTTAATGTATTC 57.336 37.500 0.00 0.00 46.40 1.75
2259 3284 3.056749 GGGCCCAATATGACTAGTCTACG 60.057 52.174 19.95 7.70 0.00 3.51
2394 3455 2.036992 CGAGATAGCAGCTCCCTCAAAT 59.963 50.000 18.69 0.00 0.00 2.32
2395 3456 1.410517 CGAGATAGCAGCTCCCTCAAA 59.589 52.381 18.69 0.00 0.00 2.69
2397 3458 1.459455 GCGAGATAGCAGCTCCCTCA 61.459 60.000 18.69 0.00 37.05 3.86
2399 3460 2.560119 CGCGAGATAGCAGCTCCCT 61.560 63.158 0.00 0.00 36.85 4.20
2458 3519 7.715249 ACGATATAGCCAGAATTGCTAAAAAGA 59.285 33.333 0.60 0.00 43.96 2.52
2510 3620 1.000646 TATTTCAACGGGTGGGGCC 60.001 57.895 0.00 0.00 0.00 5.80
2536 3646 4.397103 CCGTAAAAACTAAATCTCACCCCC 59.603 45.833 0.00 0.00 0.00 5.40
2537 3647 4.397103 CCCGTAAAAACTAAATCTCACCCC 59.603 45.833 0.00 0.00 0.00 4.95
2539 3649 6.168389 TCTCCCGTAAAAACTAAATCTCACC 58.832 40.000 0.00 0.00 0.00 4.02
2541 3651 8.152246 TCTTTCTCCCGTAAAAACTAAATCTCA 58.848 33.333 0.00 0.00 0.00 3.27
2544 3654 8.320396 ACTCTTTCTCCCGTAAAAACTAAATC 57.680 34.615 0.00 0.00 0.00 2.17
2545 3655 9.433153 CTACTCTTTCTCCCGTAAAAACTAAAT 57.567 33.333 0.00 0.00 0.00 1.40
2547 3657 7.381323 CCTACTCTTTCTCCCGTAAAAACTAA 58.619 38.462 0.00 0.00 0.00 2.24
2548 3658 6.071165 CCCTACTCTTTCTCCCGTAAAAACTA 60.071 42.308 0.00 0.00 0.00 2.24
2549 3659 5.279859 CCCTACTCTTTCTCCCGTAAAAACT 60.280 44.000 0.00 0.00 0.00 2.66
2550 3660 4.934001 CCCTACTCTTTCTCCCGTAAAAAC 59.066 45.833 0.00 0.00 0.00 2.43
2551 3661 4.840115 TCCCTACTCTTTCTCCCGTAAAAA 59.160 41.667 0.00 0.00 0.00 1.94
2552 3662 4.419282 TCCCTACTCTTTCTCCCGTAAAA 58.581 43.478 0.00 0.00 0.00 1.52
2553 3663 4.021916 CTCCCTACTCTTTCTCCCGTAAA 58.978 47.826 0.00 0.00 0.00 2.01
2554 3664 3.626729 CCTCCCTACTCTTTCTCCCGTAA 60.627 52.174 0.00 0.00 0.00 3.18
2555 3665 2.091994 CCTCCCTACTCTTTCTCCCGTA 60.092 54.545 0.00 0.00 0.00 4.02
2556 3666 1.342175 CCTCCCTACTCTTTCTCCCGT 60.342 57.143 0.00 0.00 0.00 5.28
2557 3667 1.404843 CCTCCCTACTCTTTCTCCCG 58.595 60.000 0.00 0.00 0.00 5.14
2558 3668 1.008571 ACCCTCCCTACTCTTTCTCCC 59.991 57.143 0.00 0.00 0.00 4.30
2559 3669 2.390696 GACCCTCCCTACTCTTTCTCC 58.609 57.143 0.00 0.00 0.00 3.71
2560 3670 2.025898 CGACCCTCCCTACTCTTTCTC 58.974 57.143 0.00 0.00 0.00 2.87
2641 4055 1.351430 TTCCATCGCGCTGTCGAAAG 61.351 55.000 9.34 0.00 42.15 2.62
2642 4056 1.351430 CTTCCATCGCGCTGTCGAAA 61.351 55.000 9.34 0.00 42.15 3.46
2719 4133 1.547675 GGCTGTCCCATTTCAACTCCA 60.548 52.381 0.00 0.00 0.00 3.86
2722 4136 2.158475 TGAAGGCTGTCCCATTTCAACT 60.158 45.455 0.00 0.00 35.39 3.16
2733 4147 1.363744 CGGAACAGATGAAGGCTGTC 58.636 55.000 0.00 0.00 45.27 3.51
2736 4150 0.107945 GAGCGGAACAGATGAAGGCT 60.108 55.000 0.00 0.00 0.00 4.58
2741 4155 0.247460 CACCTGAGCGGAACAGATGA 59.753 55.000 0.00 0.00 37.54 2.92
2746 4160 2.525629 TCCCACCTGAGCGGAACA 60.526 61.111 0.00 0.00 36.31 3.18
2750 4164 3.976490 TACCCTCCCACCTGAGCGG 62.976 68.421 0.00 0.00 39.35 5.52
2751 4165 2.363795 TACCCTCCCACCTGAGCG 60.364 66.667 0.00 0.00 0.00 5.03
2752 4166 0.910088 AACTACCCTCCCACCTGAGC 60.910 60.000 0.00 0.00 0.00 4.26
2754 4168 1.132657 TGAAACTACCCTCCCACCTGA 60.133 52.381 0.00 0.00 0.00 3.86
2756 4170 1.703513 GTTGAAACTACCCTCCCACCT 59.296 52.381 0.00 0.00 0.00 4.00
2757 4171 1.703513 AGTTGAAACTACCCTCCCACC 59.296 52.381 0.00 0.00 37.52 4.61
2758 4172 2.290134 GGAGTTGAAACTACCCTCCCAC 60.290 54.545 0.00 0.00 39.88 4.61
2775 4191 2.684735 GGAGGACGAGGAGGGAGT 59.315 66.667 0.00 0.00 0.00 3.85
2793 4209 1.600023 TGAAAATGACGGGTCACACC 58.400 50.000 3.22 0.00 43.11 4.16
2795 4211 2.432444 GGATGAAAATGACGGGTCACA 58.568 47.619 3.22 0.00 43.11 3.58
2803 4219 5.140177 GCGATATTGACGGATGAAAATGAC 58.860 41.667 0.00 0.00 0.00 3.06
2806 4222 5.050091 GTCTGCGATATTGACGGATGAAAAT 60.050 40.000 0.00 0.00 0.00 1.82
2807 4223 4.270084 GTCTGCGATATTGACGGATGAAAA 59.730 41.667 0.00 0.00 0.00 2.29
2810 4226 2.623416 AGTCTGCGATATTGACGGATGA 59.377 45.455 0.00 0.00 36.01 2.92
2811 4227 2.728318 CAGTCTGCGATATTGACGGATG 59.272 50.000 0.00 0.00 36.01 3.51
2812 4228 2.864097 GCAGTCTGCGATATTGACGGAT 60.864 50.000 9.53 0.00 36.01 4.18
2813 4229 1.536072 GCAGTCTGCGATATTGACGGA 60.536 52.381 9.53 0.00 36.01 4.69
2873 4289 4.858680 TTGGCACGCAACCGACCA 62.859 61.111 0.00 0.00 40.53 4.02
2875 4291 1.729131 CAATTGGCACGCAACCGAC 60.729 57.895 0.00 0.00 38.29 4.79
2886 4302 1.887344 AATGGACACGGGCAATTGGC 61.887 55.000 23.06 23.06 43.74 4.52
2887 4303 1.468985 TAATGGACACGGGCAATTGG 58.531 50.000 7.72 0.00 0.00 3.16
2889 4305 2.520069 TGTTAATGGACACGGGCAATT 58.480 42.857 0.00 0.00 0.00 2.32
2891 4307 2.088423 GATGTTAATGGACACGGGCAA 58.912 47.619 0.00 0.00 31.30 4.52
2976 4399 3.300009 GTCCATTGCGACAGTCTTTTTG 58.700 45.455 0.00 0.00 32.74 2.44
2991 4414 2.939103 GCTTGTGAGCTATTCGTCCATT 59.061 45.455 0.00 0.00 45.65 3.16
3035 4458 1.475213 GCTGCGGGGTAAGAGCTATTT 60.475 52.381 0.00 0.00 0.00 1.40
3050 4473 4.641645 TGGAGGTTGTGGGCTGCG 62.642 66.667 0.00 0.00 0.00 5.18
3091 4514 1.939934 CACAGTTCGAACAAGGAAGCA 59.060 47.619 28.78 0.00 0.00 3.91
3110 4533 2.525629 TTCCCCGAGAGTGGCACA 60.526 61.111 21.41 0.00 0.00 4.57
3122 4545 0.319405 TCGTTCCGTTCTTCTTCCCC 59.681 55.000 0.00 0.00 0.00 4.81
3123 4546 1.672145 CCTCGTTCCGTTCTTCTTCCC 60.672 57.143 0.00 0.00 0.00 3.97
3127 4550 1.000496 GTCACCTCGTTCCGTTCTTCT 60.000 52.381 0.00 0.00 0.00 2.85
3133 4556 1.727511 TTGTCGTCACCTCGTTCCGT 61.728 55.000 0.00 0.00 0.00 4.69
3134 4557 0.595567 TTTGTCGTCACCTCGTTCCG 60.596 55.000 0.00 0.00 0.00 4.30
3144 4567 0.391597 GACCACCTCCTTTGTCGTCA 59.608 55.000 0.00 0.00 0.00 4.35
3149 4572 1.752833 GGTCGACCACCTCCTTTGT 59.247 57.895 29.75 0.00 42.84 2.83
3164 4587 1.330655 TTCTCCTGGGCGATGAGGTC 61.331 60.000 2.30 0.00 0.00 3.85
3182 4605 3.803340 TGTAAAGGTGATCCTCCTCCTT 58.197 45.455 6.96 3.13 44.35 3.36
3195 4618 0.331616 GGCCTCCACCATGTAAAGGT 59.668 55.000 0.00 0.00 40.85 3.50
3204 4627 1.541118 TCCTTCATGGCCTCCACCA 60.541 57.895 3.32 0.00 45.82 4.17
3216 4639 0.757188 GAGGGCGAGATCCTCCTTCA 60.757 60.000 0.00 0.00 43.71 3.02
3281 4704 0.526211 TCATAGCTGTCGTGCGAGTT 59.474 50.000 0.00 0.00 38.13 3.01
3302 4725 2.575993 CTGGTCAGACGGGCTCAG 59.424 66.667 0.00 0.00 0.00 3.35
3310 4733 1.882989 AAGCGCTCTCCTGGTCAGAC 61.883 60.000 12.06 0.00 0.00 3.51
3311 4734 1.607756 AAGCGCTCTCCTGGTCAGA 60.608 57.895 12.06 0.00 0.00 3.27
3312 4735 1.447489 CAAGCGCTCTCCTGGTCAG 60.447 63.158 12.06 0.00 0.00 3.51
3313 4736 2.659016 CAAGCGCTCTCCTGGTCA 59.341 61.111 12.06 0.00 0.00 4.02
3314 4737 2.817396 GCAAGCGCTCTCCTGGTC 60.817 66.667 12.06 0.00 34.30 4.02
3315 4738 4.400961 GGCAAGCGCTCTCCTGGT 62.401 66.667 12.06 0.00 38.60 4.00
3317 4740 4.399395 TGGGCAAGCGCTCTCCTG 62.399 66.667 22.20 13.89 40.38 3.86
3318 4741 4.400961 GTGGGCAAGCGCTCTCCT 62.401 66.667 22.20 0.60 40.38 3.69
3319 4742 4.704833 TGTGGGCAAGCGCTCTCC 62.705 66.667 12.06 15.17 40.38 3.71
3320 4743 3.426568 GTGTGGGCAAGCGCTCTC 61.427 66.667 12.06 5.17 40.38 3.20
3321 4744 4.254709 TGTGTGGGCAAGCGCTCT 62.255 61.111 12.06 0.00 40.38 4.09
3322 4745 3.730761 CTGTGTGGGCAAGCGCTC 61.731 66.667 12.06 0.00 40.02 5.03
3325 4748 3.730761 GAGCTGTGTGGGCAAGCG 61.731 66.667 0.00 0.00 0.00 4.68
3326 4749 0.677731 TATGAGCTGTGTGGGCAAGC 60.678 55.000 0.00 0.00 0.00 4.01
3327 4750 1.945394 GATATGAGCTGTGTGGGCAAG 59.055 52.381 0.00 0.00 0.00 4.01
3328 4751 1.743431 CGATATGAGCTGTGTGGGCAA 60.743 52.381 0.00 0.00 0.00 4.52
3329 4752 0.179076 CGATATGAGCTGTGTGGGCA 60.179 55.000 0.00 0.00 0.00 5.36
3330 4753 0.104855 TCGATATGAGCTGTGTGGGC 59.895 55.000 0.00 0.00 0.00 5.36
3331 4754 1.539065 GGTCGATATGAGCTGTGTGGG 60.539 57.143 0.00 0.00 41.93 4.61
3332 4755 1.136891 TGGTCGATATGAGCTGTGTGG 59.863 52.381 0.00 0.00 45.46 4.17
3333 4756 2.196749 GTGGTCGATATGAGCTGTGTG 58.803 52.381 0.00 0.00 45.46 3.82
3334 4757 1.824852 TGTGGTCGATATGAGCTGTGT 59.175 47.619 0.00 0.00 45.46 3.72
3335 4758 2.584492 TGTGGTCGATATGAGCTGTG 57.416 50.000 0.00 0.00 45.46 3.66
3336 4759 2.735444 CGTTGTGGTCGATATGAGCTGT 60.735 50.000 0.00 0.00 45.46 4.40
3337 4760 1.854743 CGTTGTGGTCGATATGAGCTG 59.145 52.381 0.00 0.00 45.46 4.24
3338 4761 1.476891 ACGTTGTGGTCGATATGAGCT 59.523 47.619 0.00 0.00 45.46 4.09
3339 4762 1.588404 CACGTTGTGGTCGATATGAGC 59.412 52.381 0.00 0.00 45.46 4.26
3340 4763 1.588404 GCACGTTGTGGTCGATATGAG 59.412 52.381 0.00 0.00 33.64 2.90
3341 4764 1.203758 AGCACGTTGTGGTCGATATGA 59.796 47.619 0.00 0.00 40.38 2.15
3342 4765 1.640428 AGCACGTTGTGGTCGATATG 58.360 50.000 0.00 0.00 40.38 1.78
3350 4773 1.966451 GAAGGGGAGCACGTTGTGG 60.966 63.158 0.00 0.00 33.64 4.17
3351 4774 1.227823 TGAAGGGGAGCACGTTGTG 60.228 57.895 0.00 0.00 36.51 3.33
3352 4775 1.227853 GTGAAGGGGAGCACGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
3353 4776 1.966451 GGTGAAGGGGAGCACGTTG 60.966 63.158 0.00 0.00 35.91 4.10
3354 4777 2.113243 GAGGTGAAGGGGAGCACGTT 62.113 60.000 0.00 0.00 35.91 3.99
3355 4778 2.526873 AGGTGAAGGGGAGCACGT 60.527 61.111 0.00 0.00 35.91 4.49
3356 4779 2.266055 GAGGTGAAGGGGAGCACG 59.734 66.667 0.00 0.00 35.91 5.34
3357 4780 1.003233 GTGAGGTGAAGGGGAGCAC 60.003 63.158 0.00 0.00 0.00 4.40
3358 4781 1.152030 AGTGAGGTGAAGGGGAGCA 60.152 57.895 0.00 0.00 0.00 4.26
3359 4782 1.298014 CAGTGAGGTGAAGGGGAGC 59.702 63.158 0.00 0.00 0.00 4.70
3360 4783 0.322975 CACAGTGAGGTGAAGGGGAG 59.677 60.000 0.00 0.00 41.32 4.30
3361 4784 0.105194 TCACAGTGAGGTGAAGGGGA 60.105 55.000 0.00 0.00 44.34 4.81
3362 4785 2.452116 TCACAGTGAGGTGAAGGGG 58.548 57.895 0.00 0.00 44.34 4.79
3367 4790 1.342074 CCTCCTTCACAGTGAGGTGA 58.658 55.000 11.50 7.57 45.54 4.02
3368 4791 0.321122 GCCTCCTTCACAGTGAGGTG 60.321 60.000 11.50 11.41 46.05 4.00
3369 4792 0.764369 TGCCTCCTTCACAGTGAGGT 60.764 55.000 11.50 0.00 46.05 3.85
3370 4793 0.617413 ATGCCTCCTTCACAGTGAGG 59.383 55.000 5.67 5.67 46.87 3.86
3371 4794 1.002888 ACATGCCTCCTTCACAGTGAG 59.997 52.381 2.82 0.00 0.00 3.51
3372 4795 1.059098 ACATGCCTCCTTCACAGTGA 58.941 50.000 0.00 0.00 0.00 3.41
3373 4796 1.162698 CACATGCCTCCTTCACAGTG 58.837 55.000 0.00 0.00 0.00 3.66
3374 4797 1.059098 TCACATGCCTCCTTCACAGT 58.941 50.000 0.00 0.00 0.00 3.55
3375 4798 2.014857 CATCACATGCCTCCTTCACAG 58.985 52.381 0.00 0.00 0.00 3.66
3376 4799 1.629861 TCATCACATGCCTCCTTCACA 59.370 47.619 0.00 0.00 0.00 3.58
3377 4800 2.286872 CTCATCACATGCCTCCTTCAC 58.713 52.381 0.00 0.00 0.00 3.18
3378 4801 1.407851 GCTCATCACATGCCTCCTTCA 60.408 52.381 0.00 0.00 0.00 3.02
3379 4802 1.307097 GCTCATCACATGCCTCCTTC 58.693 55.000 0.00 0.00 0.00 3.46
3398 4821 1.722636 GAGGTGTAGGCCTCGTACCG 61.723 65.000 9.68 0.00 44.64 4.02
3414 4837 2.693864 AGGGGTGGATGGCTGAGG 60.694 66.667 0.00 0.00 0.00 3.86
3425 4848 0.322456 TGAAGATTTCGCCAGGGGTG 60.322 55.000 2.89 0.00 33.99 4.61
3426 4849 0.404040 TTGAAGATTTCGCCAGGGGT 59.596 50.000 2.89 0.00 0.00 4.95
3427 4850 1.098050 CTTGAAGATTTCGCCAGGGG 58.902 55.000 0.00 0.00 0.00 4.79
3431 4854 2.682856 GGTATGCTTGAAGATTTCGCCA 59.317 45.455 0.00 0.00 0.00 5.69
3458 4881 1.308998 GTCACCCACACAACCTTCTG 58.691 55.000 0.00 0.00 0.00 3.02
3459 4882 0.182775 GGTCACCCACACAACCTTCT 59.817 55.000 0.00 0.00 0.00 2.85
3478 4902 2.572095 TAATGGAGCCTGACGCCGTG 62.572 60.000 0.00 0.00 42.11 4.94
3573 4999 1.636988 GTGACCCGTCTCGGTAAATG 58.363 55.000 7.40 0.00 46.80 2.32
3599 5025 3.677976 GCATTTTCAAGAGGAATGCCCAG 60.678 47.826 16.10 0.00 46.04 4.45
3624 5056 2.428530 CTGTCATCATCGAGGTTGGAGA 59.571 50.000 8.16 0.00 0.00 3.71
3626 5058 1.482182 CCTGTCATCATCGAGGTTGGA 59.518 52.381 8.16 0.00 0.00 3.53
3663 5096 3.075005 GCCGGTCCAGCTACCTCA 61.075 66.667 1.90 0.00 37.39 3.86
3685 5118 1.675116 CCTCATCATCTAGGCATGGCG 60.675 57.143 14.30 0.16 0.00 5.69
3693 5126 1.876799 ACGACTCGCCTCATCATCTAG 59.123 52.381 0.00 0.00 0.00 2.43
3698 5131 1.241315 TGTGACGACTCGCCTCATCA 61.241 55.000 0.00 0.00 0.00 3.07
3747 5180 1.454479 GCTCCCCACCATGACCATG 60.454 63.158 0.00 3.11 38.51 3.66
3800 5233 8.653984 TTTCGATGAGATTTTTGTATGAAACG 57.346 30.769 0.00 0.00 0.00 3.60
3858 5291 7.118245 CGGTTGCATATGTCAATGTATACATCT 59.882 37.037 18.52 6.75 37.50 2.90
3860 5293 6.934083 TCGGTTGCATATGTCAATGTATACAT 59.066 34.615 12.75 12.75 39.56 2.29
3867 5300 4.880886 TTCTCGGTTGCATATGTCAATG 57.119 40.909 13.30 10.29 0.00 2.82
3974 5411 7.421530 TCTTGTAATTAGTCTTGCACTTGTC 57.578 36.000 0.00 0.00 36.43 3.18
4057 5494 9.749490 GTTCGATGTTTATTTCTGAAATTCGTA 57.251 29.630 22.88 16.05 31.59 3.43
4097 5929 1.134946 GTGCCAAAACAAGTCACAGCT 59.865 47.619 0.00 0.00 0.00 4.24
4099 5931 3.508744 AAGTGCCAAAACAAGTCACAG 57.491 42.857 0.00 0.00 0.00 3.66
4108 5940 5.815222 ACAACTCCATTTTAAGTGCCAAAAC 59.185 36.000 0.00 0.00 0.00 2.43
4155 5995 6.713450 GTCAACAAAATACACTTCCTTCCCTA 59.287 38.462 0.00 0.00 0.00 3.53
4156 5996 5.535030 GTCAACAAAATACACTTCCTTCCCT 59.465 40.000 0.00 0.00 0.00 4.20
4159 5999 6.791303 TGTGTCAACAAAATACACTTCCTTC 58.209 36.000 0.00 0.00 43.09 3.46
4161 6001 6.321181 ACATGTGTCAACAAAATACACTTCCT 59.679 34.615 0.00 0.00 43.09 3.36
4163 6003 9.677567 ATTACATGTGTCAACAAAATACACTTC 57.322 29.630 9.11 0.00 43.09 3.01
4188 6029 5.879777 GCACACCCCTGCAAAATTAAATTAT 59.120 36.000 0.00 0.00 37.11 1.28
4197 6038 1.152943 TACGCACACCCCTGCAAAA 60.153 52.632 0.00 0.00 36.94 2.44
4399 6240 3.832720 GAGCCGGAAGAGATCGCGG 62.833 68.421 5.05 0.00 41.81 6.46
4405 6246 1.096386 GCGAGTAGAGCCGGAAGAGA 61.096 60.000 5.05 0.00 0.00 3.10
4480 6321 7.020827 TCCTCTGGTCATCTCATTTTTACTT 57.979 36.000 0.00 0.00 0.00 2.24
4485 6329 4.268359 GCTTCCTCTGGTCATCTCATTTT 58.732 43.478 0.00 0.00 0.00 1.82
4503 6347 1.423395 CTAATCATCTCCCGCGCTTC 58.577 55.000 5.56 0.00 0.00 3.86
4530 6374 4.458989 ACAGCAAGGCGATGAGAATTTTTA 59.541 37.500 0.00 0.00 0.00 1.52
4615 6463 6.409524 TTCTTTGCCTGTTCTCAAATGATT 57.590 33.333 0.00 0.00 32.51 2.57
4623 6471 6.642540 CCACTTAATTTTCTTTGCCTGTTCTC 59.357 38.462 0.00 0.00 0.00 2.87
4715 6563 2.817665 AGTCTTGTACTCTACCCCCAC 58.182 52.381 0.00 0.00 30.33 4.61
4716 6564 4.680278 TTAGTCTTGTACTCTACCCCCA 57.320 45.455 0.00 0.00 39.80 4.96
4717 6565 6.238869 CGTAATTAGTCTTGTACTCTACCCCC 60.239 46.154 0.00 0.00 39.80 5.40
4718 6566 6.543831 TCGTAATTAGTCTTGTACTCTACCCC 59.456 42.308 0.00 0.00 39.80 4.95
4719 6567 7.559590 TCGTAATTAGTCTTGTACTCTACCC 57.440 40.000 0.00 0.00 39.80 3.69
4735 6583 8.974060 AAGGCCTTTCTGAATATTCGTAATTA 57.026 30.769 13.78 0.00 0.00 1.40
4816 7032 6.825721 GGAGCTTCATCCTCTATCTTCAAAAA 59.174 38.462 0.00 0.00 36.35 1.94
4819 7035 4.964897 TGGAGCTTCATCCTCTATCTTCAA 59.035 41.667 0.00 0.00 40.29 2.69
4820 7036 4.550669 TGGAGCTTCATCCTCTATCTTCA 58.449 43.478 0.00 0.00 40.29 3.02
4821 7037 5.543507 TTGGAGCTTCATCCTCTATCTTC 57.456 43.478 0.00 0.00 40.29 2.87
4822 7038 5.190528 TGTTTGGAGCTTCATCCTCTATCTT 59.809 40.000 0.00 0.00 40.29 2.40
4823 7039 4.718774 TGTTTGGAGCTTCATCCTCTATCT 59.281 41.667 0.00 0.00 40.29 1.98
4824 7040 5.028549 TGTTTGGAGCTTCATCCTCTATC 57.971 43.478 0.00 0.00 40.29 2.08
4825 7041 4.141528 CCTGTTTGGAGCTTCATCCTCTAT 60.142 45.833 0.00 0.00 40.29 1.98
4832 7048 2.957402 TCACCTGTTTGGAGCTTCAT 57.043 45.000 0.00 0.00 39.71 2.57
4833 7049 2.783135 GATCACCTGTTTGGAGCTTCA 58.217 47.619 0.00 0.00 39.71 3.02
4834 7050 1.734465 CGATCACCTGTTTGGAGCTTC 59.266 52.381 0.00 0.00 39.71 3.86
4837 7053 1.079503 GTCGATCACCTGTTTGGAGC 58.920 55.000 0.00 0.00 39.71 4.70
4838 7054 1.001974 TGGTCGATCACCTGTTTGGAG 59.998 52.381 13.32 0.00 46.98 3.86
4840 7056 2.113860 ATGGTCGATCACCTGTTTGG 57.886 50.000 0.00 0.00 46.98 3.28
4842 7058 2.224769 ACCAATGGTCGATCACCTGTTT 60.225 45.455 0.00 0.00 46.98 2.83
4843 7059 1.351017 ACCAATGGTCGATCACCTGTT 59.649 47.619 0.00 0.00 46.98 3.16
4975 7200 3.320541 TGAACTGGCAACCCAATAAACAG 59.679 43.478 0.00 0.00 41.58 3.16
4991 7216 2.981805 CACGCATCATTTGGTTGAACTG 59.018 45.455 0.00 0.00 0.00 3.16
5003 7228 1.001020 TCCCTTTGGCACGCATCAT 60.001 52.632 0.00 0.00 0.00 2.45
5009 7234 1.675641 CTTCCCTCCCTTTGGCACG 60.676 63.158 0.00 0.00 0.00 5.34
5022 7247 0.179006 GGGATGGATGTGCTCTTCCC 60.179 60.000 15.75 7.47 38.37 3.97
5023 7248 0.548031 TGGGATGGATGTGCTCTTCC 59.452 55.000 12.51 12.51 38.08 3.46
5024 7249 2.228059 CATGGGATGGATGTGCTCTTC 58.772 52.381 0.00 0.00 0.00 2.87
5025 7250 2.359981 CATGGGATGGATGTGCTCTT 57.640 50.000 0.00 0.00 0.00 2.85
5082 7307 6.924913 TCAATATTGTGTTTCCAATTGGGA 57.075 33.333 24.29 13.89 46.61 4.37
5186 7412 5.527214 GGTCCAAACCAAATTCTTTTTCAGG 59.473 40.000 0.00 0.00 45.68 3.86
5187 7413 6.603237 GGTCCAAACCAAATTCTTTTTCAG 57.397 37.500 0.00 0.00 45.68 3.02
5195 7421 2.604139 TGGAGGGTCCAAACCAAATTC 58.396 47.619 0.00 0.00 45.00 2.17
5271 7497 9.289782 ACACTAAGAATCAGCAGTTCTTTTATT 57.710 29.630 13.72 0.00 41.75 1.40
5272 7498 8.725148 CACACTAAGAATCAGCAGTTCTTTTAT 58.275 33.333 13.72 1.78 41.75 1.40
5284 7510 7.636150 AAATTCCCATCACACTAAGAATCAG 57.364 36.000 0.00 0.00 0.00 2.90
5299 7525 7.775053 AAATGTGTACACACTAAATTCCCAT 57.225 32.000 30.11 7.65 46.55 4.00
5338 7564 9.260002 CCTCAGTTAAGCACATTTTTACATTTT 57.740 29.630 0.00 0.00 0.00 1.82
5339 7565 8.421002 ACCTCAGTTAAGCACATTTTTACATTT 58.579 29.630 0.00 0.00 0.00 2.32
5340 7566 7.951591 ACCTCAGTTAAGCACATTTTTACATT 58.048 30.769 0.00 0.00 0.00 2.71
5341 7567 7.448469 AGACCTCAGTTAAGCACATTTTTACAT 59.552 33.333 0.00 0.00 0.00 2.29
5342 7568 6.770785 AGACCTCAGTTAAGCACATTTTTACA 59.229 34.615 0.00 0.00 0.00 2.41
5343 7569 7.203255 AGACCTCAGTTAAGCACATTTTTAC 57.797 36.000 0.00 0.00 0.00 2.01
5344 7570 7.117236 CGTAGACCTCAGTTAAGCACATTTTTA 59.883 37.037 0.00 0.00 0.00 1.52
5345 7571 6.073222 CGTAGACCTCAGTTAAGCACATTTTT 60.073 38.462 0.00 0.00 0.00 1.94
5346 7572 5.408604 CGTAGACCTCAGTTAAGCACATTTT 59.591 40.000 0.00 0.00 0.00 1.82
5347 7573 4.929808 CGTAGACCTCAGTTAAGCACATTT 59.070 41.667 0.00 0.00 0.00 2.32
5348 7574 4.495422 CGTAGACCTCAGTTAAGCACATT 58.505 43.478 0.00 0.00 0.00 2.71
5349 7575 3.676324 GCGTAGACCTCAGTTAAGCACAT 60.676 47.826 0.00 0.00 0.00 3.21
5350 7576 2.352421 GCGTAGACCTCAGTTAAGCACA 60.352 50.000 0.00 0.00 0.00 4.57
5351 7577 2.260481 GCGTAGACCTCAGTTAAGCAC 58.740 52.381 0.00 0.00 0.00 4.40
5352 7578 1.135489 CGCGTAGACCTCAGTTAAGCA 60.135 52.381 0.00 0.00 0.00 3.91
5353 7579 1.135460 ACGCGTAGACCTCAGTTAAGC 60.135 52.381 11.67 0.00 0.00 3.09
5354 7580 2.161012 TGACGCGTAGACCTCAGTTAAG 59.839 50.000 13.97 0.00 0.00 1.85
5355 7581 2.153645 TGACGCGTAGACCTCAGTTAA 58.846 47.619 13.97 0.00 0.00 2.01
5356 7582 1.812235 TGACGCGTAGACCTCAGTTA 58.188 50.000 13.97 0.00 0.00 2.24
5357 7583 1.132643 GATGACGCGTAGACCTCAGTT 59.867 52.381 13.97 0.00 0.00 3.16
5358 7584 0.733729 GATGACGCGTAGACCTCAGT 59.266 55.000 13.97 0.00 0.00 3.41
5359 7585 0.316278 CGATGACGCGTAGACCTCAG 60.316 60.000 13.97 0.00 0.00 3.35
5360 7586 1.712018 CCGATGACGCGTAGACCTCA 61.712 60.000 13.97 4.82 38.29 3.86
5361 7587 1.009900 CCGATGACGCGTAGACCTC 60.010 63.158 13.97 1.24 38.29 3.85
5362 7588 1.748122 ACCGATGACGCGTAGACCT 60.748 57.895 13.97 0.00 38.29 3.85
5363 7589 1.585521 CACCGATGACGCGTAGACC 60.586 63.158 13.97 0.00 38.29 3.85
5364 7590 1.585521 CCACCGATGACGCGTAGAC 60.586 63.158 13.97 5.26 38.29 2.59
5365 7591 2.042259 ACCACCGATGACGCGTAGA 61.042 57.895 13.97 1.18 38.29 2.59
5366 7592 1.872234 CACCACCGATGACGCGTAG 60.872 63.158 13.97 3.90 38.29 3.51
5367 7593 2.179767 CACCACCGATGACGCGTA 59.820 61.111 13.97 0.41 38.29 4.42
5370 7596 3.788766 GTGCACCACCGATGACGC 61.789 66.667 5.22 0.00 38.29 5.19
5371 7597 2.356913 TGTGCACCACCGATGACG 60.357 61.111 15.69 0.00 39.43 4.35
5372 7598 3.253955 GTGTGCACCACCGATGAC 58.746 61.111 15.69 0.00 38.18 3.06
5382 7608 2.393271 AGATGCTCTAAGGTGTGCAC 57.607 50.000 10.75 10.75 38.89 4.57
5383 7609 2.831526 TGTAGATGCTCTAAGGTGTGCA 59.168 45.455 0.00 0.00 40.07 4.57
5384 7610 3.452474 CTGTAGATGCTCTAAGGTGTGC 58.548 50.000 0.00 0.00 29.58 4.57
5385 7611 3.739519 GCCTGTAGATGCTCTAAGGTGTG 60.740 52.174 14.83 0.00 33.58 3.82
5386 7612 2.432510 GCCTGTAGATGCTCTAAGGTGT 59.567 50.000 14.83 0.00 33.58 4.16
5387 7613 2.432146 TGCCTGTAGATGCTCTAAGGTG 59.568 50.000 14.83 0.00 33.58 4.00
5388 7614 2.697751 CTGCCTGTAGATGCTCTAAGGT 59.302 50.000 14.83 0.00 33.58 3.50
5389 7615 2.036992 CCTGCCTGTAGATGCTCTAAGG 59.963 54.545 12.06 12.06 33.88 2.69
5390 7616 2.547642 GCCTGCCTGTAGATGCTCTAAG 60.548 54.545 0.00 0.00 29.58 2.18
5391 7617 1.414181 GCCTGCCTGTAGATGCTCTAA 59.586 52.381 0.00 0.00 29.58 2.10
5392 7618 1.043816 GCCTGCCTGTAGATGCTCTA 58.956 55.000 0.00 0.00 0.00 2.43
5393 7619 0.979709 TGCCTGCCTGTAGATGCTCT 60.980 55.000 0.00 0.00 0.00 4.09
5394 7620 0.813210 GTGCCTGCCTGTAGATGCTC 60.813 60.000 0.00 0.00 0.00 4.26
5395 7621 1.222936 GTGCCTGCCTGTAGATGCT 59.777 57.895 0.00 0.00 0.00 3.79
5396 7622 1.821332 GGTGCCTGCCTGTAGATGC 60.821 63.158 0.00 0.00 0.00 3.91
5397 7623 1.153086 GGGTGCCTGCCTGTAGATG 60.153 63.158 0.00 0.00 0.00 2.90
5398 7624 0.031111 TAGGGTGCCTGCCTGTAGAT 60.031 55.000 0.00 0.00 34.61 1.98
5399 7625 0.252513 TTAGGGTGCCTGCCTGTAGA 60.253 55.000 0.00 0.00 34.61 2.59
5400 7626 0.618458 TTTAGGGTGCCTGCCTGTAG 59.382 55.000 0.00 0.00 34.61 2.74
5401 7627 0.326927 GTTTAGGGTGCCTGCCTGTA 59.673 55.000 0.00 0.00 34.61 2.74
5402 7628 1.074951 GTTTAGGGTGCCTGCCTGT 59.925 57.895 0.00 0.00 34.61 4.00
5403 7629 1.678970 GGTTTAGGGTGCCTGCCTG 60.679 63.158 0.00 0.00 34.61 4.85
5404 7630 2.763902 GGTTTAGGGTGCCTGCCT 59.236 61.111 0.00 0.00 34.61 4.75
5405 7631 2.750237 CGGTTTAGGGTGCCTGCC 60.750 66.667 0.00 0.00 34.61 4.85
5406 7632 2.750237 CCGGTTTAGGGTGCCTGC 60.750 66.667 0.00 0.00 34.61 4.85
5407 7633 2.750237 GCCGGTTTAGGGTGCCTG 60.750 66.667 1.90 0.00 34.61 4.85
5408 7634 4.043100 GGCCGGTTTAGGGTGCCT 62.043 66.667 1.90 0.00 39.05 4.75
5409 7635 3.989838 GAGGCCGGTTTAGGGTGCC 62.990 68.421 1.90 0.00 42.48 5.01
5410 7636 2.437895 GAGGCCGGTTTAGGGTGC 60.438 66.667 1.90 0.00 0.00 5.01
5411 7637 0.250989 TTTGAGGCCGGTTTAGGGTG 60.251 55.000 1.90 0.00 0.00 4.61
5412 7638 0.251033 GTTTGAGGCCGGTTTAGGGT 60.251 55.000 1.90 0.00 0.00 4.34
5413 7639 1.303091 CGTTTGAGGCCGGTTTAGGG 61.303 60.000 1.90 0.00 0.00 3.53
5414 7640 1.918868 GCGTTTGAGGCCGGTTTAGG 61.919 60.000 1.90 0.00 0.00 2.69
5415 7641 0.953960 AGCGTTTGAGGCCGGTTTAG 60.954 55.000 1.90 0.00 0.00 1.85
5416 7642 0.952010 GAGCGTTTGAGGCCGGTTTA 60.952 55.000 1.90 0.00 34.58 2.01
5417 7643 2.203294 AGCGTTTGAGGCCGGTTT 60.203 55.556 1.90 0.00 0.00 3.27
5418 7644 2.668550 GAGCGTTTGAGGCCGGTT 60.669 61.111 1.90 0.00 34.58 4.44
5438 7664 4.778143 AATGACCAGACGGGCCGC 62.778 66.667 28.71 19.04 41.25 6.53
5439 7665 2.819595 CAATGACCAGACGGGCCG 60.820 66.667 27.06 27.06 41.25 6.13
5440 7666 1.745489 GTCAATGACCAGACGGGCC 60.745 63.158 1.10 0.00 41.25 5.80
5441 7667 3.890674 GTCAATGACCAGACGGGC 58.109 61.111 1.10 0.00 42.99 6.13
5450 7676 4.701956 AAAATCATGACCGGTCAATGAC 57.298 40.909 39.04 11.84 43.58 3.06
5451 7677 4.142708 CGAAAAATCATGACCGGTCAATGA 60.143 41.667 39.04 35.15 43.58 2.57
5452 7678 4.097714 CGAAAAATCATGACCGGTCAATG 58.902 43.478 39.04 32.04 43.58 2.82
5453 7679 4.006989 TCGAAAAATCATGACCGGTCAAT 58.993 39.130 39.04 26.50 43.58 2.57
5454 7680 3.187637 GTCGAAAAATCATGACCGGTCAA 59.812 43.478 39.04 25.44 43.58 3.18
5455 7681 2.739913 GTCGAAAAATCATGACCGGTCA 59.260 45.455 37.79 37.79 44.59 4.02
5456 7682 2.095372 GGTCGAAAAATCATGACCGGTC 59.905 50.000 28.17 28.17 41.26 4.79
5457 7683 2.081462 GGTCGAAAAATCATGACCGGT 58.919 47.619 6.92 6.92 41.26 5.28
5458 7684 2.825086 GGTCGAAAAATCATGACCGG 57.175 50.000 0.00 0.00 41.26 5.28
5461 7687 3.181520 CGTCTGGGTCGAAAAATCATGAC 60.182 47.826 0.00 0.00 0.00 3.06
5462 7688 3.000041 CGTCTGGGTCGAAAAATCATGA 59.000 45.455 0.00 0.00 0.00 3.07
5463 7689 2.095853 CCGTCTGGGTCGAAAAATCATG 59.904 50.000 0.00 0.00 0.00 3.07
5464 7690 2.356135 CCGTCTGGGTCGAAAAATCAT 58.644 47.619 0.00 0.00 0.00 2.45
5465 7691 1.803334 CCGTCTGGGTCGAAAAATCA 58.197 50.000 0.00 0.00 0.00 2.57
5466 7692 0.446616 GCCGTCTGGGTCGAAAAATC 59.553 55.000 0.00 0.00 38.44 2.17
5467 7693 0.958876 GGCCGTCTGGGTCGAAAAAT 60.959 55.000 0.00 0.00 38.44 1.82
5468 7694 1.598685 GGCCGTCTGGGTCGAAAAA 60.599 57.895 0.00 0.00 38.44 1.94
5469 7695 2.031465 GGCCGTCTGGGTCGAAAA 59.969 61.111 0.00 0.00 38.44 2.29
5470 7696 4.011517 GGGCCGTCTGGGTCGAAA 62.012 66.667 0.00 0.00 43.31 3.46
5477 7703 3.646715 TTTGAGGGGGCCGTCTGG 61.647 66.667 0.00 0.00 38.77 3.86
5478 7704 2.359975 GTTTGAGGGGGCCGTCTG 60.360 66.667 0.00 0.00 0.00 3.51
5479 7705 4.016706 CGTTTGAGGGGGCCGTCT 62.017 66.667 0.00 0.00 0.00 4.18
5488 7714 1.852067 CGTTTGAGGCCCGTTTGAGG 61.852 60.000 0.00 0.00 0.00 3.86
5489 7715 1.574428 CGTTTGAGGCCCGTTTGAG 59.426 57.895 0.00 0.00 0.00 3.02
5490 7716 2.548295 GCGTTTGAGGCCCGTTTGA 61.548 57.895 0.00 0.00 0.00 2.69
5491 7717 2.050442 GCGTTTGAGGCCCGTTTG 60.050 61.111 0.00 0.00 0.00 2.93
5492 7718 3.292159 GGCGTTTGAGGCCCGTTT 61.292 61.111 0.00 0.00 42.98 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.