Multiple sequence alignment - TraesCS6D01G141300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G141300 chr6D 100.000 7937 0 0 1 7937 110879311 110871375 0.000000e+00 14657.0
1 TraesCS6D01G141300 chr6D 81.279 657 100 21 5051 5693 110749566 110748919 1.980000e-140 510.0
2 TraesCS6D01G141300 chr6D 87.164 335 42 1 3810 4143 110750313 110749979 5.810000e-101 379.0
3 TraesCS6D01G141300 chr6D 99.237 131 1 0 4157 4287 110875027 110874897 3.700000e-58 237.0
4 TraesCS6D01G141300 chr6D 99.237 131 1 0 4285 4415 110875155 110875025 3.700000e-58 237.0
5 TraesCS6D01G141300 chr6D 87.013 154 17 2 6808 6961 110748737 110748587 3.810000e-38 171.0
6 TraesCS6D01G141300 chr6D 84.000 125 6 5 4716 4840 110874448 110874338 3.030000e-19 108.0
7 TraesCS6D01G141300 chr6D 84.000 125 6 5 4864 4974 110874596 110874472 3.030000e-19 108.0
8 TraesCS6D01G141300 chr6D 91.667 72 6 0 988 1059 110752957 110752886 5.070000e-17 100.0
9 TraesCS6D01G141300 chr6D 87.209 86 9 2 5735 5819 385231471 385231387 6.560000e-16 97.1
10 TraesCS6D01G141300 chr6D 98.113 53 0 1 4743 4795 110874389 110874338 3.050000e-14 91.6
11 TraesCS6D01G141300 chr6A 96.762 2934 87 6 1358 4287 135233462 135230533 0.000000e+00 4885.0
12 TraesCS6D01G141300 chr6A 92.223 1723 102 10 4923 6624 135230204 135228493 0.000000e+00 2410.0
13 TraesCS6D01G141300 chr6A 91.909 1273 62 14 6699 7937 135228491 135227226 0.000000e+00 1742.0
14 TraesCS6D01G141300 chr6A 91.848 1239 51 28 1 1219 135240357 135239149 0.000000e+00 1683.0
15 TraesCS6D01G141300 chr6A 94.542 513 23 5 4285 4795 135230662 135230153 0.000000e+00 787.0
16 TraesCS6D01G141300 chr6A 88.211 246 22 3 2279 2521 2348282 2348041 3.620000e-73 287.0
17 TraesCS6D01G141300 chr6A 100.000 47 0 0 4864 4910 135230231 135230185 3.950000e-13 87.9
18 TraesCS6D01G141300 chr6B 95.771 2128 64 9 1358 3481 199757116 199755011 0.000000e+00 3408.0
19 TraesCS6D01G141300 chr6B 97.654 810 19 0 3478 4287 199754850 199754041 0.000000e+00 1391.0
20 TraesCS6D01G141300 chr6B 88.821 1145 90 15 5844 6961 199747602 199746469 0.000000e+00 1371.0
21 TraesCS6D01G141300 chr6B 89.697 990 64 13 6966 7920 199746429 199745443 0.000000e+00 1229.0
22 TraesCS6D01G141300 chr6B 92.428 832 48 11 1 830 199760755 199759937 0.000000e+00 1173.0
23 TraesCS6D01G141300 chr6B 95.839 697 17 4 4923 5619 199753714 199753030 0.000000e+00 1116.0
24 TraesCS6D01G141300 chr6B 96.634 505 15 2 4285 4789 199754171 199753669 0.000000e+00 837.0
25 TraesCS6D01G141300 chr6B 81.707 656 100 20 5051 5693 199077741 199077093 5.450000e-146 529.0
26 TraesCS6D01G141300 chr6B 96.000 250 7 2 913 1162 199757508 199757262 3.450000e-108 403.0
27 TraesCS6D01G141300 chr6B 86.866 335 43 1 3810 4143 199078492 199078158 2.700000e-99 374.0
28 TraesCS6D01G141300 chr6B 93.452 168 3 7 1161 1325 152082639 152082801 7.960000e-60 243.0
29 TraesCS6D01G141300 chr6B 93.293 164 8 2 1167 1330 450843749 450843589 1.030000e-58 239.0
30 TraesCS6D01G141300 chr6B 91.736 121 8 2 5617 5736 199747727 199747608 4.930000e-37 167.0
31 TraesCS6D01G141300 chr6B 87.129 101 13 0 5721 5821 364704706 364704806 1.810000e-21 115.0
32 TraesCS6D01G141300 chr6B 100.000 47 0 0 4864 4910 199753741 199753695 3.950000e-13 87.9
33 TraesCS6D01G141300 chr6B 97.059 34 1 0 6212 6245 199747274 199747241 3.090000e-04 58.4
34 TraesCS6D01G141300 chr6B 94.737 38 1 1 823 859 199757617 199757580 3.090000e-04 58.4
35 TraesCS6D01G141300 chr1D 86.490 1695 165 36 2618 4274 420053254 420054922 0.000000e+00 1803.0
36 TraesCS6D01G141300 chr1D 90.530 264 22 2 1915 2177 420052837 420053098 5.900000e-91 346.0
37 TraesCS6D01G141300 chr1D 95.294 85 3 1 4942 5026 78965826 78965909 5.000000e-27 134.0
38 TraesCS6D01G141300 chr1D 89.888 89 9 0 5735 5823 212719246 212719334 1.810000e-21 115.0
39 TraesCS6D01G141300 chr1D 85.556 90 11 2 5733 5821 225458809 225458721 8.480000e-15 93.5
40 TraesCS6D01G141300 chr7A 86.180 1686 163 41 2618 4267 46903903 46905554 0.000000e+00 1759.0
41 TraesCS6D01G141300 chr7A 95.238 42 1 1 4806 4847 167268878 167268838 1.850000e-06 65.8
42 TraesCS6D01G141300 chr7A 96.875 32 0 1 4761 4792 20664765 20664735 1.400000e-02 52.8
43 TraesCS6D01G141300 chr5A 86.315 1666 162 39 2618 4249 299626773 299628406 0.000000e+00 1753.0
44 TraesCS6D01G141300 chr5A 91.078 269 21 2 1915 2182 299626356 299626622 2.110000e-95 361.0
45 TraesCS6D01G141300 chr5B 85.943 1686 167 40 2618 4267 6611039 6612690 0.000000e+00 1736.0
46 TraesCS6D01G141300 chr5B 90.530 264 22 2 1915 2177 6610622 6610883 5.900000e-91 346.0
47 TraesCS6D01G141300 chr5B 78.140 430 67 14 6168 6584 684607329 684607744 1.710000e-61 248.0
48 TraesCS6D01G141300 chr5B 94.186 86 5 0 4941 5026 134917767 134917852 1.800000e-26 132.0
49 TraesCS6D01G141300 chr5B 95.349 43 1 1 4805 4847 36322302 36322261 5.140000e-07 67.6
50 TraesCS6D01G141300 chr3B 85.762 1194 124 34 3121 4284 61537690 61536513 0.000000e+00 1221.0
51 TraesCS6D01G141300 chr3B 87.109 512 54 7 2618 3129 61538602 61538103 3.210000e-158 569.0
52 TraesCS6D01G141300 chr3B 90.805 261 22 1 1918 2178 61539016 61538758 1.640000e-91 348.0
53 TraesCS6D01G141300 chr3B 92.941 170 8 3 1161 1329 23408570 23408404 2.210000e-60 244.0
54 TraesCS6D01G141300 chr3B 93.373 166 8 2 1160 1325 112325136 112325298 7.960000e-60 243.0
55 TraesCS6D01G141300 chr2B 89.504 686 61 7 1915 2593 613224634 613225315 0.000000e+00 857.0
56 TraesCS6D01G141300 chr2B 85.458 502 60 8 2099 2593 102557590 102557095 1.980000e-140 510.0
57 TraesCS6D01G141300 chr2B 92.308 91 7 0 4937 5027 14834414 14834324 6.460000e-26 130.0
58 TraesCS6D01G141300 chr2A 84.938 644 63 11 3672 4283 21341293 21341934 8.750000e-174 621.0
59 TraesCS6D01G141300 chr2A 88.085 470 46 9 2952 3419 21340640 21341101 4.190000e-152 549.0
60 TraesCS6D01G141300 chr2A 92.763 152 10 1 3512 3663 21341087 21341237 1.340000e-52 219.0
61 TraesCS6D01G141300 chr2A 93.617 47 2 1 4801 4847 185729196 185729151 1.430000e-07 69.4
62 TraesCS6D01G141300 chr2A 91.837 49 2 2 4800 4847 714303010 714302963 5.140000e-07 67.6
63 TraesCS6D01G141300 chrUn 91.017 423 34 4 1915 2334 461333513 461333934 1.160000e-157 568.0
64 TraesCS6D01G141300 chrUn 91.017 423 34 4 1915 2334 471386097 471385676 1.160000e-157 568.0
65 TraesCS6D01G141300 chrUn 88.223 467 45 9 2958 3422 358265921 358265463 4.190000e-152 549.0
66 TraesCS6D01G141300 chrUn 88.550 262 23 3 2336 2593 340868489 340868747 2.150000e-80 311.0
67 TraesCS6D01G141300 chrUn 88.550 262 23 3 2336 2593 469986676 469986418 2.150000e-80 311.0
68 TraesCS6D01G141300 chrUn 91.772 158 12 1 3512 3669 358265480 358265324 1.340000e-52 219.0
69 TraesCS6D01G141300 chr4A 79.502 683 85 18 5954 6584 626061318 626060639 1.220000e-117 435.0
70 TraesCS6D01G141300 chr4A 94.186 86 5 0 4941 5026 647209390 647209305 1.800000e-26 132.0
71 TraesCS6D01G141300 chr4B 83.439 471 61 11 2618 3088 203862068 203861615 9.520000e-114 422.0
72 TraesCS6D01G141300 chr4B 87.119 295 31 5 2303 2593 203862351 203862060 2.140000e-85 327.0
73 TraesCS6D01G141300 chr4B 95.349 43 1 1 4805 4847 283233867 283233826 5.140000e-07 67.6
74 TraesCS6D01G141300 chr2D 88.353 249 22 3 2276 2521 181277961 181278205 7.790000e-75 292.0
75 TraesCS6D01G141300 chr2D 92.571 175 9 3 1152 1325 362930979 362930808 1.710000e-61 248.0
76 TraesCS6D01G141300 chr2D 92.857 168 8 3 1161 1328 624881786 624881949 2.860000e-59 241.0
77 TraesCS6D01G141300 chr7B 92.442 172 10 2 1158 1329 114143489 114143321 7.960000e-60 243.0
78 TraesCS6D01G141300 chr7B 88.235 85 8 2 5735 5818 709252553 709252636 5.070000e-17 100.0
79 TraesCS6D01G141300 chr7D 91.954 174 10 3 1160 1333 379768972 379768803 2.860000e-59 241.0
80 TraesCS6D01G141300 chr7D 95.349 86 3 1 4941 5026 41146562 41146646 1.390000e-27 135.0
81 TraesCS6D01G141300 chr5D 91.860 172 11 2 1159 1330 53583075 53583243 3.700000e-58 237.0
82 TraesCS6D01G141300 chr5D 93.333 90 5 1 4937 5026 122198519 122198431 1.800000e-26 132.0
83 TraesCS6D01G141300 chr5D 94.253 87 4 1 4941 5026 498655370 498655284 1.800000e-26 132.0
84 TraesCS6D01G141300 chr3D 92.308 91 7 0 4942 5032 602205248 602205158 6.460000e-26 130.0
85 TraesCS6D01G141300 chr3D 90.566 53 4 1 4795 4847 23225479 23225530 1.430000e-07 69.4
86 TraesCS6D01G141300 chr3D 91.667 48 2 2 4802 4849 49864531 49864486 1.850000e-06 65.8
87 TraesCS6D01G141300 chr1A 91.011 89 5 2 5730 5817 365069860 365069946 5.030000e-22 117.0
88 TraesCS6D01G141300 chr1A 88.043 92 8 2 5735 5823 269573820 269573911 1.090000e-18 106.0
89 TraesCS6D01G141300 chr1A 97.059 34 1 0 4762 4795 96488508 96488541 3.090000e-04 58.4
90 TraesCS6D01G141300 chr1B 88.764 89 10 0 5735 5823 302512176 302512088 8.420000e-20 110.0
91 TraesCS6D01G141300 chr4D 95.349 43 1 1 4805 4847 113457221 113457180 5.140000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G141300 chr6D 110871375 110879311 7936 True 14657.000000 14657 100.000000 1 7937 1 chr6D.!!$R1 7936
1 TraesCS6D01G141300 chr6D 110748587 110752957 4370 True 290.000000 510 86.780750 988 6961 4 chr6D.!!$R3 5973
2 TraesCS6D01G141300 chr6A 135227226 135233462 6236 True 1982.380000 4885 95.087200 1358 7937 5 chr6A.!!$R3 6579
3 TraesCS6D01G141300 chr6A 135239149 135240357 1208 True 1683.000000 1683 91.848000 1 1219 1 chr6A.!!$R2 1218
4 TraesCS6D01G141300 chr6B 199753030 199760755 7725 True 1059.287500 3408 96.132875 1 5619 8 chr6B.!!$R4 5618
5 TraesCS6D01G141300 chr6B 199745443 199747727 2284 True 706.350000 1371 91.828250 5617 7920 4 chr6B.!!$R3 2303
6 TraesCS6D01G141300 chr6B 199077093 199078492 1399 True 451.500000 529 84.286500 3810 5693 2 chr6B.!!$R2 1883
7 TraesCS6D01G141300 chr1D 420052837 420054922 2085 False 1074.500000 1803 88.510000 1915 4274 2 chr1D.!!$F3 2359
8 TraesCS6D01G141300 chr7A 46903903 46905554 1651 False 1759.000000 1759 86.180000 2618 4267 1 chr7A.!!$F1 1649
9 TraesCS6D01G141300 chr5A 299626356 299628406 2050 False 1057.000000 1753 88.696500 1915 4249 2 chr5A.!!$F1 2334
10 TraesCS6D01G141300 chr5B 6610622 6612690 2068 False 1041.000000 1736 88.236500 1915 4267 2 chr5B.!!$F3 2352
11 TraesCS6D01G141300 chr3B 61536513 61539016 2503 True 712.666667 1221 87.892000 1918 4284 3 chr3B.!!$R2 2366
12 TraesCS6D01G141300 chr2B 613224634 613225315 681 False 857.000000 857 89.504000 1915 2593 1 chr2B.!!$F1 678
13 TraesCS6D01G141300 chr2A 21340640 21341934 1294 False 463.000000 621 88.595333 2952 4283 3 chr2A.!!$F1 1331
14 TraesCS6D01G141300 chrUn 358265324 358265921 597 True 384.000000 549 89.997500 2958 3669 2 chrUn.!!$R3 711
15 TraesCS6D01G141300 chr4A 626060639 626061318 679 True 435.000000 435 79.502000 5954 6584 1 chr4A.!!$R1 630
16 TraesCS6D01G141300 chr4B 203861615 203862351 736 True 374.500000 422 85.279000 2303 3088 2 chr4B.!!$R2 785

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
30 31 0.112218 CCACCCCTTGTGTCCATGAA 59.888 55.000 0.00 0.0 43.85 2.57 F
1077 3486 0.927537 GTTTGCTGCGTTCAAAACCC 59.072 50.000 0.00 0.0 35.49 4.11 F
1329 3739 2.249139 AGGAACGGAGGGAGTATATGC 58.751 52.381 0.00 0.0 0.00 3.14 F
2645 5410 0.663153 AGTTTCAACGCACAAGCTCC 59.337 50.000 0.00 0.0 39.10 4.70 F
3735 7209 0.178921 TCTCTGTGGTTGGCTCTCCT 60.179 55.000 0.00 0.0 0.00 3.69 F
4500 8053 0.480252 ACCAGGCTTCTTTTCCTGCT 59.520 50.000 2.89 0.0 46.48 4.24 F
4881 8463 0.373716 CGTTTTATCACTCGGGCAGC 59.626 55.000 0.00 0.0 0.00 5.25 F
5827 9420 0.176219 ATTATGGGACGAACGCCGAA 59.824 50.000 4.79 0.0 41.76 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1310 3720 1.067776 CGCATATACTCCCTCCGTTCC 60.068 57.143 0.00 0.0 0.00 3.62 R
2645 5410 3.871006 TCACAGATTATTGCACGCTTAGG 59.129 43.478 0.00 0.0 0.00 2.69 R
3199 6441 4.693566 TGGAGGTAAGCGACATTACAAAAG 59.306 41.667 7.59 0.0 37.38 2.27 R
4395 7940 0.598065 GCGTTTGAGACATGGCCTTT 59.402 50.000 3.32 0.0 0.00 3.11 R
4874 8456 0.250209 ATGAGATTGCTAGCTGCCCG 60.250 55.000 17.23 0.0 42.00 6.13 R
5645 9237 0.516877 CATTGCGTCACGAACACCAT 59.483 50.000 0.00 0.0 0.00 3.55 R
6141 9742 0.597072 CGGGCGAATCTCCTAGTACC 59.403 60.000 0.00 0.0 0.00 3.34 R
7637 11467 0.249322 ACGAATACCAATCCTCGCCG 60.249 55.000 0.00 0.0 34.70 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.823356 CAACCTGACCACCCCTTGTG 60.823 60.000 0.00 0.00 45.01 3.33
23 24 1.286305 AACCTGACCACCCCTTGTGT 61.286 55.000 0.00 0.00 43.85 3.72
24 25 1.073199 CCTGACCACCCCTTGTGTC 59.927 63.158 0.00 0.00 43.85 3.67
25 26 1.073199 CTGACCACCCCTTGTGTCC 59.927 63.158 0.00 0.00 43.85 4.02
26 27 1.694525 TGACCACCCCTTGTGTCCA 60.695 57.895 0.00 0.00 43.85 4.02
27 28 1.065410 TGACCACCCCTTGTGTCCAT 61.065 55.000 0.00 0.00 43.85 3.41
28 29 0.609131 GACCACCCCTTGTGTCCATG 60.609 60.000 0.00 0.00 43.85 3.66
29 30 1.065410 ACCACCCCTTGTGTCCATGA 61.065 55.000 0.00 0.00 43.85 3.07
30 31 0.112218 CCACCCCTTGTGTCCATGAA 59.888 55.000 0.00 0.00 43.85 2.57
31 32 1.480312 CCACCCCTTGTGTCCATGAAA 60.480 52.381 0.00 0.00 43.85 2.69
32 33 1.888512 CACCCCTTGTGTCCATGAAAG 59.111 52.381 0.00 0.00 40.26 2.62
40 41 5.750067 CCTTGTGTCCATGAAAGAAAACAAG 59.250 40.000 14.16 14.16 38.59 3.16
41 42 5.913137 TGTGTCCATGAAAGAAAACAAGT 57.087 34.783 0.00 0.00 0.00 3.16
48 49 7.805071 GTCCATGAAAGAAAACAAGTATGTCTG 59.195 37.037 0.00 0.00 39.40 3.51
238 239 3.808174 GGCACGACTATAAGGAAATCACC 59.192 47.826 0.00 0.00 0.00 4.02
373 374 1.805945 GCTTCTCGTTCATCGCCGT 60.806 57.895 0.00 0.00 39.67 5.68
395 417 4.484872 GAACCCTAGCCGGCACCC 62.485 72.222 31.54 6.21 0.00 4.61
529 555 2.606826 GGTCGGGTGGAGGAAGGT 60.607 66.667 0.00 0.00 0.00 3.50
761 795 9.319143 CTAAATATATTCTATCCGAAAGCCCAG 57.681 37.037 0.00 0.00 34.79 4.45
1077 3486 0.927537 GTTTGCTGCGTTCAAAACCC 59.072 50.000 0.00 0.00 35.49 4.11
1092 3501 5.347124 TCAAAACCCCTCCTCTCACTATTA 58.653 41.667 0.00 0.00 0.00 0.98
1093 3502 5.970640 TCAAAACCCCTCCTCTCACTATTAT 59.029 40.000 0.00 0.00 0.00 1.28
1142 3551 3.758554 CCTCGGCATTTCCATATTAAGGG 59.241 47.826 0.00 0.00 34.01 3.95
1180 3589 5.340439 ACTACTTCCTCCGTTCCTAAATG 57.660 43.478 0.00 0.00 0.00 2.32
1182 3591 5.954150 ACTACTTCCTCCGTTCCTAAATGTA 59.046 40.000 0.00 0.00 0.00 2.29
1202 3611 9.899226 AAATGTAAGTCTTTTTAGAGATTGCAC 57.101 29.630 0.00 0.00 0.00 4.57
1203 3612 8.854614 ATGTAAGTCTTTTTAGAGATTGCACT 57.145 30.769 0.00 0.00 0.00 4.40
1205 3614 9.204570 TGTAAGTCTTTTTAGAGATTGCACTAC 57.795 33.333 0.00 0.00 0.00 2.73
1207 3616 8.677148 AAGTCTTTTTAGAGATTGCACTACAA 57.323 30.769 0.00 0.00 44.01 2.41
1219 3629 4.524316 TGCACTACAAACTACATACGGT 57.476 40.909 0.00 0.00 0.00 4.83
1220 3630 4.885413 TGCACTACAAACTACATACGGTT 58.115 39.130 0.00 0.00 0.00 4.44
1221 3631 4.687018 TGCACTACAAACTACATACGGTTG 59.313 41.667 0.00 0.00 0.00 3.77
1222 3632 4.687483 GCACTACAAACTACATACGGTTGT 59.313 41.667 0.00 0.00 37.04 3.32
1223 3633 5.863397 GCACTACAAACTACATACGGTTGTA 59.137 40.000 0.00 0.00 34.29 2.41
1224 3634 6.532657 GCACTACAAACTACATACGGTTGTAT 59.467 38.462 1.67 0.00 42.03 2.29
1225 3635 7.701924 GCACTACAAACTACATACGGTTGTATA 59.298 37.037 1.67 0.00 39.28 1.47
1226 3636 9.740239 CACTACAAACTACATACGGTTGTATAT 57.260 33.333 1.67 0.00 39.28 0.86
1230 3640 9.956720 ACAAACTACATACGGTTGTATATAGAC 57.043 33.333 7.52 0.00 39.42 2.59
1231 3641 9.955208 CAAACTACATACGGTTGTATATAGACA 57.045 33.333 7.52 0.00 39.42 3.41
1232 3642 9.956720 AAACTACATACGGTTGTATATAGACAC 57.043 33.333 0.00 0.00 39.42 3.67
1233 3643 8.681486 ACTACATACGGTTGTATATAGACACA 57.319 34.615 0.00 0.00 39.42 3.72
1234 3644 9.293404 ACTACATACGGTTGTATATAGACACAT 57.707 33.333 0.00 0.00 39.42 3.21
1253 3663 8.768397 AGACACATATTTTAGGGTGTAGATTCA 58.232 33.333 0.00 0.00 43.91 2.57
1254 3664 8.732746 ACACATATTTTAGGGTGTAGATTCAC 57.267 34.615 0.00 0.00 42.24 3.18
1255 3665 8.548877 ACACATATTTTAGGGTGTAGATTCACT 58.451 33.333 0.00 0.00 42.24 3.41
1256 3666 9.046296 CACATATTTTAGGGTGTAGATTCACTC 57.954 37.037 0.00 0.00 38.92 3.51
1257 3667 8.768397 ACATATTTTAGGGTGTAGATTCACTCA 58.232 33.333 0.00 0.00 40.86 3.41
1258 3668 9.784531 CATATTTTAGGGTGTAGATTCACTCAT 57.215 33.333 0.00 0.00 40.86 2.90
1261 3671 8.934023 TTTTAGGGTGTAGATTCACTCATTTT 57.066 30.769 0.00 0.00 40.86 1.82
1262 3672 7.921786 TTAGGGTGTAGATTCACTCATTTTG 57.078 36.000 0.00 0.00 40.86 2.44
1263 3673 4.702131 AGGGTGTAGATTCACTCATTTTGC 59.298 41.667 0.00 0.00 40.86 3.68
1264 3674 4.702131 GGGTGTAGATTCACTCATTTTGCT 59.298 41.667 0.00 0.00 38.54 3.91
1265 3675 5.183904 GGGTGTAGATTCACTCATTTTGCTT 59.816 40.000 0.00 0.00 38.54 3.91
1266 3676 6.317857 GGTGTAGATTCACTCATTTTGCTTC 58.682 40.000 0.00 0.00 38.28 3.86
1267 3677 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
1268 3678 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
1269 3679 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
1270 3680 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
1271 3681 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
1272 3682 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
1273 3683 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
1274 3684 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
1275 3685 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
1276 3686 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
1277 3687 5.581085 ACTCATTTTGCTTCGTATGTAGTCC 59.419 40.000 0.00 0.00 0.00 3.85
1278 3688 5.483811 TCATTTTGCTTCGTATGTAGTCCA 58.516 37.500 0.00 0.00 0.00 4.02
1279 3689 5.350365 TCATTTTGCTTCGTATGTAGTCCAC 59.650 40.000 0.00 0.00 0.00 4.02
1280 3690 3.945981 TTGCTTCGTATGTAGTCCACA 57.054 42.857 0.00 0.00 42.69 4.17
1281 3691 3.945981 TGCTTCGTATGTAGTCCACAA 57.054 42.857 0.00 0.00 41.55 3.33
1282 3692 4.465632 TGCTTCGTATGTAGTCCACAAT 57.534 40.909 0.00 0.00 41.55 2.71
1283 3693 4.180817 TGCTTCGTATGTAGTCCACAATG 58.819 43.478 0.00 0.00 41.55 2.82
1284 3694 3.555956 GCTTCGTATGTAGTCCACAATGG 59.444 47.826 0.00 0.00 41.55 3.16
1285 3695 4.679639 GCTTCGTATGTAGTCCACAATGGA 60.680 45.833 0.00 0.00 45.98 3.41
1319 3729 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1320 3730 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1321 3731 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1322 3732 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1323 3733 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
1324 3734 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
1325 3735 7.954620 ACTTATATTTAGGAACGGAGGGAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
1326 3736 9.471702 CTTATATTTAGGAACGGAGGGAGTATA 57.528 37.037 0.00 0.00 0.00 1.47
1328 3738 6.607004 ATTTAGGAACGGAGGGAGTATATG 57.393 41.667 0.00 0.00 0.00 1.78
1329 3739 2.249139 AGGAACGGAGGGAGTATATGC 58.751 52.381 0.00 0.00 0.00 3.14
1351 3761 7.677454 TGCGATAATAATTAGTACTCCTCGA 57.323 36.000 14.45 0.00 0.00 4.04
1352 3762 8.277490 TGCGATAATAATTAGTACTCCTCGAT 57.723 34.615 14.45 0.00 0.00 3.59
1353 3763 9.387257 TGCGATAATAATTAGTACTCCTCGATA 57.613 33.333 14.45 3.76 0.00 2.92
1501 3995 4.666512 ACTTCCTTGCCACTGAACATATT 58.333 39.130 0.00 0.00 0.00 1.28
1565 4212 5.885912 TGAAGTGAACTTAAAGCAGGAGTTT 59.114 36.000 0.00 0.00 36.11 2.66
1566 4213 5.757850 AGTGAACTTAAAGCAGGAGTTTG 57.242 39.130 0.00 0.00 34.02 2.93
1578 4243 3.440522 GCAGGAGTTTGTCTTATTGGGTC 59.559 47.826 0.00 0.00 0.00 4.46
1581 4246 4.597507 AGGAGTTTGTCTTATTGGGTCAGA 59.402 41.667 0.00 0.00 0.00 3.27
1591 4256 7.606456 TGTCTTATTGGGTCAGAGTTGTAAATC 59.394 37.037 0.00 0.00 0.00 2.17
1592 4257 7.606456 GTCTTATTGGGTCAGAGTTGTAAATCA 59.394 37.037 0.00 0.00 0.00 2.57
1595 4260 7.781324 ATTGGGTCAGAGTTGTAAATCATTT 57.219 32.000 0.00 0.00 0.00 2.32
1678 4343 5.723887 AGCCCTATACAGATATGGAAAGAGG 59.276 44.000 0.00 0.00 0.00 3.69
1683 4348 8.527810 CCTATACAGATATGGAAAGAGGAAGAC 58.472 40.741 0.00 0.00 0.00 3.01
1685 4350 6.478512 ACAGATATGGAAAGAGGAAGACTC 57.521 41.667 0.00 0.00 46.98 3.36
1712 4377 3.821033 GAGGTTGGCAACTTCTATTGTGT 59.179 43.478 28.84 4.66 34.92 3.72
1760 4425 7.277098 TCAGTATGTTAAGTAAATGCCGTCTTC 59.723 37.037 0.00 0.00 37.40 2.87
1774 4440 3.928375 GCCGTCTTCGTAATTCTTGGTTA 59.072 43.478 0.00 0.00 35.01 2.85
2645 5410 0.663153 AGTTTCAACGCACAAGCTCC 59.337 50.000 0.00 0.00 39.10 4.70
2664 5429 3.466836 TCCCTAAGCGTGCAATAATCTG 58.533 45.455 0.00 0.00 0.00 2.90
2870 5675 3.361786 GGAGCCAGGCAAAAATAGGTTA 58.638 45.455 15.80 0.00 0.00 2.85
2872 5677 4.381612 GGAGCCAGGCAAAAATAGGTTAAC 60.382 45.833 15.80 0.00 0.00 2.01
2888 5702 9.700831 AATAGGTTAACTGCTTATCCATTTCTT 57.299 29.630 5.42 0.00 0.00 2.52
2889 5703 9.700831 ATAGGTTAACTGCTTATCCATTTCTTT 57.299 29.630 5.42 0.00 0.00 2.52
2890 5704 8.422577 AGGTTAACTGCTTATCCATTTCTTTT 57.577 30.769 5.42 0.00 0.00 2.27
3191 6433 4.829064 TGTCTGTGCTGTTAATTTCCAC 57.171 40.909 0.00 0.00 0.00 4.02
3199 6441 7.367285 TGTGCTGTTAATTTCCACTATTTGAC 58.633 34.615 0.00 0.00 0.00 3.18
3735 7209 0.178921 TCTCTGTGGTTGGCTCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
4056 7583 8.114331 AGTTGATGAACAAGATATTGCTTTCA 57.886 30.769 8.13 8.13 39.30 2.69
4085 7614 7.148590 GGCACATGAACAAAATATGTCTTTTCC 60.149 37.037 0.00 0.00 42.99 3.13
4179 7723 4.217550 TGCTTAACCAAGAATGTTGGCTAC 59.782 41.667 9.25 0.00 43.23 3.58
4184 7728 3.054361 ACCAAGAATGTTGGCTACCTAGG 60.054 47.826 9.25 7.41 43.23 3.02
4287 7832 2.226962 AAGGCCATGTCTCAAATGCT 57.773 45.000 5.01 0.00 0.00 3.79
4288 7833 2.226962 AGGCCATGTCTCAAATGCTT 57.773 45.000 5.01 0.00 0.00 3.91
4289 7834 3.370840 AGGCCATGTCTCAAATGCTTA 57.629 42.857 5.01 0.00 0.00 3.09
4290 7835 3.700538 AGGCCATGTCTCAAATGCTTAA 58.299 40.909 5.01 0.00 0.00 1.85
4291 7836 3.445096 AGGCCATGTCTCAAATGCTTAAC 59.555 43.478 5.01 0.00 0.00 2.01
4292 7837 3.429410 GGCCATGTCTCAAATGCTTAACC 60.429 47.826 0.00 0.00 0.00 2.85
4293 7838 3.193267 GCCATGTCTCAAATGCTTAACCA 59.807 43.478 0.00 0.00 0.00 3.67
4294 7839 4.321899 GCCATGTCTCAAATGCTTAACCAA 60.322 41.667 0.00 0.00 0.00 3.67
4295 7840 5.404946 CCATGTCTCAAATGCTTAACCAAG 58.595 41.667 0.00 0.00 34.66 3.61
4296 7841 5.183713 CCATGTCTCAAATGCTTAACCAAGA 59.816 40.000 0.00 0.00 33.20 3.02
4297 7842 6.294675 CCATGTCTCAAATGCTTAACCAAGAA 60.295 38.462 0.00 0.00 33.20 2.52
4298 7843 6.899393 TGTCTCAAATGCTTAACCAAGAAT 57.101 33.333 0.00 0.00 30.53 2.40
4299 7844 6.680810 TGTCTCAAATGCTTAACCAAGAATG 58.319 36.000 0.00 0.00 29.71 2.67
4300 7845 6.265196 TGTCTCAAATGCTTAACCAAGAATGT 59.735 34.615 0.00 0.00 29.71 2.71
4301 7846 7.147976 GTCTCAAATGCTTAACCAAGAATGTT 58.852 34.615 0.00 0.00 29.71 2.71
4302 7847 7.115378 GTCTCAAATGCTTAACCAAGAATGTTG 59.885 37.037 0.00 0.00 29.71 3.33
4303 7848 6.222389 TCAAATGCTTAACCAAGAATGTTGG 58.778 36.000 7.69 7.69 44.91 3.77
4304 7849 3.658757 TGCTTAACCAAGAATGTTGGC 57.341 42.857 9.25 0.00 43.23 4.52
4305 7850 3.230134 TGCTTAACCAAGAATGTTGGCT 58.770 40.909 9.25 0.00 43.23 4.75
4306 7851 4.402829 TGCTTAACCAAGAATGTTGGCTA 58.597 39.130 9.25 0.00 43.23 3.93
4307 7852 4.217550 TGCTTAACCAAGAATGTTGGCTAC 59.782 41.667 9.25 0.00 43.23 3.58
4308 7853 4.380550 GCTTAACCAAGAATGTTGGCTACC 60.381 45.833 9.25 0.00 43.23 3.18
4309 7854 3.525800 AACCAAGAATGTTGGCTACCT 57.474 42.857 9.25 0.00 43.23 3.08
4310 7855 4.650972 AACCAAGAATGTTGGCTACCTA 57.349 40.909 9.25 0.00 43.23 3.08
4311 7856 4.222124 ACCAAGAATGTTGGCTACCTAG 57.778 45.455 9.25 0.00 43.23 3.02
4312 7857 3.054361 ACCAAGAATGTTGGCTACCTAGG 60.054 47.826 9.25 7.41 43.23 3.02
4313 7858 3.054361 CCAAGAATGTTGGCTACCTAGGT 60.054 47.826 20.57 20.57 32.18 3.08
4314 7859 4.192317 CAAGAATGTTGGCTACCTAGGTC 58.808 47.826 20.32 4.63 0.00 3.85
4315 7860 3.725634 AGAATGTTGGCTACCTAGGTCT 58.274 45.455 20.32 1.72 0.00 3.85
4316 7861 4.104831 AGAATGTTGGCTACCTAGGTCTT 58.895 43.478 20.32 0.00 0.00 3.01
4317 7862 4.536489 AGAATGTTGGCTACCTAGGTCTTT 59.464 41.667 20.32 7.26 0.00 2.52
4318 7863 4.929146 ATGTTGGCTACCTAGGTCTTTT 57.071 40.909 20.32 0.00 0.00 2.27
4319 7864 4.717279 TGTTGGCTACCTAGGTCTTTTT 57.283 40.909 20.32 0.00 0.00 1.94
4343 7888 7.867305 TTTCTTTACAGTTTATGTGACACCA 57.133 32.000 2.45 0.00 43.80 4.17
4344 7889 7.867305 TTCTTTACAGTTTATGTGACACCAA 57.133 32.000 2.45 0.00 43.80 3.67
4345 7890 7.867305 TCTTTACAGTTTATGTGACACCAAA 57.133 32.000 2.45 0.86 43.80 3.28
4346 7891 8.282455 TCTTTACAGTTTATGTGACACCAAAA 57.718 30.769 2.45 0.87 43.80 2.44
4347 7892 8.740906 TCTTTACAGTTTATGTGACACCAAAAA 58.259 29.630 2.45 0.00 43.80 1.94
4348 7893 9.528018 CTTTACAGTTTATGTGACACCAAAAAT 57.472 29.630 2.45 0.29 43.80 1.82
4349 7894 8.864069 TTACAGTTTATGTGACACCAAAAATG 57.136 30.769 19.91 19.91 43.80 2.32
4350 7895 6.279882 ACAGTTTATGTGACACCAAAAATGG 58.720 36.000 22.90 12.30 41.91 3.16
4351 7896 6.127196 ACAGTTTATGTGACACCAAAAATGGT 60.127 34.615 22.90 12.70 41.91 3.55
4352 7897 7.068839 ACAGTTTATGTGACACCAAAAATGGTA 59.931 33.333 22.90 0.00 41.91 3.25
4353 7898 8.087750 CAGTTTATGTGACACCAAAAATGGTAT 58.912 33.333 16.37 0.00 40.85 2.73
4354 7899 8.087750 AGTTTATGTGACACCAAAAATGGTATG 58.912 33.333 2.45 0.00 40.85 2.39
4355 7900 7.531857 TTATGTGACACCAAAAATGGTATGT 57.468 32.000 2.45 0.00 40.85 2.29
4356 7901 5.446143 TGTGACACCAAAAATGGTATGTC 57.554 39.130 2.45 10.18 40.85 3.06
4357 7902 4.023622 TGTGACACCAAAAATGGTATGTCG 60.024 41.667 2.45 0.00 40.85 4.35
4358 7903 3.504134 TGACACCAAAAATGGTATGTCGG 59.496 43.478 0.00 0.00 40.85 4.79
4359 7904 3.492337 ACACCAAAAATGGTATGTCGGT 58.508 40.909 0.00 0.00 40.85 4.69
4360 7905 3.892588 ACACCAAAAATGGTATGTCGGTT 59.107 39.130 0.00 0.00 40.85 4.44
4361 7906 4.342665 ACACCAAAAATGGTATGTCGGTTT 59.657 37.500 0.00 0.00 40.85 3.27
4362 7907 5.163395 ACACCAAAAATGGTATGTCGGTTTT 60.163 36.000 0.00 0.00 40.85 2.43
4363 7908 6.040616 ACACCAAAAATGGTATGTCGGTTTTA 59.959 34.615 0.00 0.00 40.85 1.52
4364 7909 6.924060 CACCAAAAATGGTATGTCGGTTTTAA 59.076 34.615 0.00 0.00 40.85 1.52
4365 7910 7.600752 CACCAAAAATGGTATGTCGGTTTTAAT 59.399 33.333 0.00 0.00 40.85 1.40
4366 7911 8.151596 ACCAAAAATGGTATGTCGGTTTTAATT 58.848 29.630 0.00 0.00 41.04 1.40
4367 7912 9.640963 CCAAAAATGGTATGTCGGTTTTAATTA 57.359 29.630 0.00 0.00 0.00 1.40
4372 7917 9.675464 AATGGTATGTCGGTTTTAATTAGAAGA 57.325 29.630 0.00 0.00 0.00 2.87
4373 7918 9.847224 ATGGTATGTCGGTTTTAATTAGAAGAT 57.153 29.630 0.00 0.00 0.00 2.40
4379 7924 8.938906 TGTCGGTTTTAATTAGAAGATACAACC 58.061 33.333 0.00 0.00 0.00 3.77
4381 7926 7.967178 CGGTTTTAATTAGAAGATACAACCGT 58.033 34.615 10.70 0.00 45.75 4.83
4382 7927 7.901377 CGGTTTTAATTAGAAGATACAACCGTG 59.099 37.037 10.70 0.00 45.75 4.94
4383 7928 8.938906 GGTTTTAATTAGAAGATACAACCGTGA 58.061 33.333 0.00 0.00 0.00 4.35
4384 7929 9.968743 GTTTTAATTAGAAGATACAACCGTGAG 57.031 33.333 0.00 0.00 0.00 3.51
4385 7930 7.766219 TTAATTAGAAGATACAACCGTGAGC 57.234 36.000 0.00 0.00 0.00 4.26
4386 7931 4.794278 TTAGAAGATACAACCGTGAGCA 57.206 40.909 0.00 0.00 0.00 4.26
4387 7932 2.960819 AGAAGATACAACCGTGAGCAC 58.039 47.619 0.00 0.00 0.00 4.40
4388 7933 2.299013 AGAAGATACAACCGTGAGCACA 59.701 45.455 1.20 0.00 0.00 4.57
4389 7934 2.080286 AGATACAACCGTGAGCACAC 57.920 50.000 3.95 3.95 42.88 3.82
4397 7942 3.106552 GTGAGCACACGCCACAAA 58.893 55.556 0.00 0.00 38.46 2.83
4398 7943 1.009675 GTGAGCACACGCCACAAAG 60.010 57.895 0.00 0.00 38.46 2.77
4399 7944 2.186160 TGAGCACACGCCACAAAGG 61.186 57.895 0.00 0.00 39.83 3.11
4409 7954 3.344703 CCACAAAGGCCATGTCTCA 57.655 52.632 5.01 0.00 0.00 3.27
4410 7955 1.619654 CCACAAAGGCCATGTCTCAA 58.380 50.000 5.01 0.00 0.00 3.02
4411 7956 1.962807 CCACAAAGGCCATGTCTCAAA 59.037 47.619 5.01 0.00 0.00 2.69
4412 7957 2.288395 CCACAAAGGCCATGTCTCAAAC 60.288 50.000 5.01 0.00 0.00 2.93
4413 7958 1.608590 ACAAAGGCCATGTCTCAAACG 59.391 47.619 5.01 0.00 0.00 3.60
4414 7959 0.598065 AAAGGCCATGTCTCAAACGC 59.402 50.000 5.01 0.00 0.00 4.84
4415 7960 1.577328 AAGGCCATGTCTCAAACGCG 61.577 55.000 5.01 3.53 0.00 6.01
4416 7961 2.480555 GCCATGTCTCAAACGCGG 59.519 61.111 12.47 0.00 0.00 6.46
4499 8052 1.000171 CAACCAGGCTTCTTTTCCTGC 60.000 52.381 2.89 0.00 46.48 4.85
4500 8053 0.480252 ACCAGGCTTCTTTTCCTGCT 59.520 50.000 2.89 0.00 46.48 4.24
4750 8332 4.627611 GCAGCTAGCAATCTCATTTCAA 57.372 40.909 18.83 0.00 44.79 2.69
4752 8334 4.334759 GCAGCTAGCAATCTCATTTCAAGA 59.665 41.667 18.83 0.00 44.79 3.02
4753 8335 5.730010 GCAGCTAGCAATCTCATTTCAAGAC 60.730 44.000 18.83 0.00 44.79 3.01
4754 8336 5.585445 CAGCTAGCAATCTCATTTCAAGACT 59.415 40.000 18.83 0.00 0.00 3.24
4756 8338 7.279536 CAGCTAGCAATCTCATTTCAAGACTAA 59.720 37.037 18.83 0.00 0.00 2.24
4760 8342 8.571461 AGCAATCTCATTTCAAGACTAAATCA 57.429 30.769 0.00 0.00 0.00 2.57
4766 8348 9.823647 TCTCATTTCAAGACTAAATCATACTCC 57.176 33.333 0.00 0.00 0.00 3.85
4767 8349 8.964476 TCATTTCAAGACTAAATCATACTCCC 57.036 34.615 0.00 0.00 0.00 4.30
4768 8350 8.772250 TCATTTCAAGACTAAATCATACTCCCT 58.228 33.333 0.00 0.00 0.00 4.20
4769 8351 9.050601 CATTTCAAGACTAAATCATACTCCCTC 57.949 37.037 0.00 0.00 0.00 4.30
4770 8352 7.979786 TTCAAGACTAAATCATACTCCCTCT 57.020 36.000 0.00 0.00 0.00 3.69
4771 8353 7.353414 TCAAGACTAAATCATACTCCCTCTG 57.647 40.000 0.00 0.00 0.00 3.35
4772 8354 6.897966 TCAAGACTAAATCATACTCCCTCTGT 59.102 38.462 0.00 0.00 0.00 3.41
4773 8355 6.969993 AGACTAAATCATACTCCCTCTGTC 57.030 41.667 0.00 0.00 0.00 3.51
4774 8356 5.836358 AGACTAAATCATACTCCCTCTGTCC 59.164 44.000 0.00 0.00 0.00 4.02
4775 8357 4.902448 ACTAAATCATACTCCCTCTGTCCC 59.098 45.833 0.00 0.00 0.00 4.46
4776 8358 3.421394 AATCATACTCCCTCTGTCCCA 57.579 47.619 0.00 0.00 0.00 4.37
4777 8359 2.940514 TCATACTCCCTCTGTCCCAA 57.059 50.000 0.00 0.00 0.00 4.12
4778 8360 3.421394 TCATACTCCCTCTGTCCCAAT 57.579 47.619 0.00 0.00 0.00 3.16
4779 8361 4.552883 TCATACTCCCTCTGTCCCAATA 57.447 45.455 0.00 0.00 0.00 1.90
4780 8362 4.890988 TCATACTCCCTCTGTCCCAATAA 58.109 43.478 0.00 0.00 0.00 1.40
4781 8363 5.476983 TCATACTCCCTCTGTCCCAATAAT 58.523 41.667 0.00 0.00 0.00 1.28
4782 8364 6.630131 TCATACTCCCTCTGTCCCAATAATA 58.370 40.000 0.00 0.00 0.00 0.98
4783 8365 7.256399 TCATACTCCCTCTGTCCCAATAATAT 58.744 38.462 0.00 0.00 0.00 1.28
4784 8366 8.406643 TCATACTCCCTCTGTCCCAATAATATA 58.593 37.037 0.00 0.00 0.00 0.86
4785 8367 9.046846 CATACTCCCTCTGTCCCAATAATATAA 57.953 37.037 0.00 0.00 0.00 0.98
4786 8368 7.560796 ACTCCCTCTGTCCCAATAATATAAG 57.439 40.000 0.00 0.00 0.00 1.73
4787 8369 7.313731 ACTCCCTCTGTCCCAATAATATAAGA 58.686 38.462 0.00 0.00 0.00 2.10
4788 8370 7.964293 ACTCCCTCTGTCCCAATAATATAAGAT 59.036 37.037 0.00 0.00 0.00 2.40
4789 8371 8.380742 TCCCTCTGTCCCAATAATATAAGATC 57.619 38.462 0.00 0.00 0.00 2.75
4790 8372 7.124298 TCCCTCTGTCCCAATAATATAAGATCG 59.876 40.741 0.00 0.00 0.00 3.69
4791 8373 7.093289 CCCTCTGTCCCAATAATATAAGATCGT 60.093 40.741 0.00 0.00 0.00 3.73
4792 8374 8.314751 CCTCTGTCCCAATAATATAAGATCGTT 58.685 37.037 0.00 0.00 0.00 3.85
4793 8375 9.712305 CTCTGTCCCAATAATATAAGATCGTTT 57.288 33.333 0.00 0.00 0.00 3.60
4813 8395 8.882415 TCGTTTTATCACTAAATCATACTCCC 57.118 34.615 0.00 0.00 0.00 4.30
4814 8396 8.701895 TCGTTTTATCACTAAATCATACTCCCT 58.298 33.333 0.00 0.00 0.00 4.20
4815 8397 8.979574 CGTTTTATCACTAAATCATACTCCCTC 58.020 37.037 0.00 0.00 0.00 4.30
4818 8400 8.783660 TTATCACTAAATCATACTCCCTCTGT 57.216 34.615 0.00 0.00 0.00 3.41
4819 8401 6.716934 TCACTAAATCATACTCCCTCTGTC 57.283 41.667 0.00 0.00 0.00 3.51
4820 8402 5.598830 TCACTAAATCATACTCCCTCTGTCC 59.401 44.000 0.00 0.00 0.00 4.02
4821 8403 4.902448 ACTAAATCATACTCCCTCTGTCCC 59.098 45.833 0.00 0.00 0.00 4.46
4822 8404 3.421394 AATCATACTCCCTCTGTCCCA 57.579 47.619 0.00 0.00 0.00 4.37
4823 8405 3.645053 ATCATACTCCCTCTGTCCCAT 57.355 47.619 0.00 0.00 0.00 4.00
4824 8406 4.767000 ATCATACTCCCTCTGTCCCATA 57.233 45.455 0.00 0.00 0.00 2.74
4825 8407 4.552883 TCATACTCCCTCTGTCCCATAA 57.447 45.455 0.00 0.00 0.00 1.90
4826 8408 5.093236 TCATACTCCCTCTGTCCCATAAT 57.907 43.478 0.00 0.00 0.00 1.28
4827 8409 6.227624 TCATACTCCCTCTGTCCCATAATA 57.772 41.667 0.00 0.00 0.00 0.98
4828 8410 6.815880 TCATACTCCCTCTGTCCCATAATAT 58.184 40.000 0.00 0.00 0.00 1.28
4829 8411 7.950803 TCATACTCCCTCTGTCCCATAATATA 58.049 38.462 0.00 0.00 0.00 0.86
4830 8412 8.406643 TCATACTCCCTCTGTCCCATAATATAA 58.593 37.037 0.00 0.00 0.00 0.98
4831 8413 8.700051 CATACTCCCTCTGTCCCATAATATAAG 58.300 40.741 0.00 0.00 0.00 1.73
4832 8414 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
4833 8415 7.491681 ACTCCCTCTGTCCCATAATATAAGAT 58.508 38.462 0.00 0.00 0.00 2.40
4834 8416 7.621683 ACTCCCTCTGTCCCATAATATAAGATC 59.378 40.741 0.00 0.00 0.00 2.75
4835 8417 6.607600 TCCCTCTGTCCCATAATATAAGATCG 59.392 42.308 0.00 0.00 0.00 3.69
4836 8418 6.381420 CCCTCTGTCCCATAATATAAGATCGT 59.619 42.308 0.00 0.00 0.00 3.73
4837 8419 7.093289 CCCTCTGTCCCATAATATAAGATCGTT 60.093 40.741 0.00 0.00 0.00 3.85
4838 8420 8.314751 CCTCTGTCCCATAATATAAGATCGTTT 58.685 37.037 0.00 0.00 0.00 3.60
4839 8421 9.712305 CTCTGTCCCATAATATAAGATCGTTTT 57.288 33.333 0.00 0.00 0.00 2.43
4854 8436 7.905604 AGATCGTTTTATGACACAAAGATCA 57.094 32.000 15.74 0.00 35.69 2.92
4855 8437 7.743104 AGATCGTTTTATGACACAAAGATCAC 58.257 34.615 15.74 0.00 35.69 3.06
4856 8438 7.604164 AGATCGTTTTATGACACAAAGATCACT 59.396 33.333 15.74 0.07 35.69 3.41
4857 8439 8.771920 ATCGTTTTATGACACAAAGATCACTA 57.228 30.769 0.00 0.00 0.00 2.74
4858 8440 8.596271 TCGTTTTATGACACAAAGATCACTAA 57.404 30.769 0.00 0.00 0.00 2.24
4859 8441 8.708742 TCGTTTTATGACACAAAGATCACTAAG 58.291 33.333 0.00 0.00 0.00 2.18
4860 8442 8.708742 CGTTTTATGACACAAAGATCACTAAGA 58.291 33.333 0.00 0.00 0.00 2.10
4875 8457 7.916128 ATCACTAAGATCGTTTTATCACTCG 57.084 36.000 0.00 0.00 28.20 4.18
4876 8458 6.263344 TCACTAAGATCGTTTTATCACTCGG 58.737 40.000 0.00 0.00 0.00 4.63
4877 8459 5.459107 CACTAAGATCGTTTTATCACTCGGG 59.541 44.000 0.00 0.00 0.00 5.14
4878 8460 2.822764 AGATCGTTTTATCACTCGGGC 58.177 47.619 0.00 0.00 0.00 6.13
4879 8461 2.167693 AGATCGTTTTATCACTCGGGCA 59.832 45.455 0.00 0.00 0.00 5.36
4880 8462 2.004583 TCGTTTTATCACTCGGGCAG 57.995 50.000 0.00 0.00 0.00 4.85
4881 8463 0.373716 CGTTTTATCACTCGGGCAGC 59.626 55.000 0.00 0.00 0.00 5.25
4882 8464 1.739067 GTTTTATCACTCGGGCAGCT 58.261 50.000 0.00 0.00 0.00 4.24
4883 8465 2.737359 CGTTTTATCACTCGGGCAGCTA 60.737 50.000 0.00 0.00 0.00 3.32
4884 8466 2.866762 GTTTTATCACTCGGGCAGCTAG 59.133 50.000 0.00 0.00 0.00 3.42
4885 8467 0.389391 TTATCACTCGGGCAGCTAGC 59.611 55.000 6.62 6.62 44.65 3.42
4898 8480 4.627611 GCAGCTAGCAATCTCATTTCAA 57.372 40.909 18.83 0.00 44.79 2.69
4899 8481 4.599047 GCAGCTAGCAATCTCATTTCAAG 58.401 43.478 18.83 0.00 44.79 3.02
4900 8482 4.334759 GCAGCTAGCAATCTCATTTCAAGA 59.665 41.667 18.83 0.00 44.79 3.02
4901 8483 5.730010 GCAGCTAGCAATCTCATTTCAAGAC 60.730 44.000 18.83 0.00 44.79 3.01
4902 8484 5.585445 CAGCTAGCAATCTCATTTCAAGACT 59.415 40.000 18.83 0.00 0.00 3.24
4903 8485 6.760298 CAGCTAGCAATCTCATTTCAAGACTA 59.240 38.462 18.83 0.00 0.00 2.59
4904 8486 7.279536 CAGCTAGCAATCTCATTTCAAGACTAA 59.720 37.037 18.83 0.00 0.00 2.24
4905 8487 7.826252 AGCTAGCAATCTCATTTCAAGACTAAA 59.174 33.333 18.83 0.00 0.00 1.85
4906 8488 8.619546 GCTAGCAATCTCATTTCAAGACTAAAT 58.380 33.333 10.63 0.00 0.00 1.40
4908 8490 8.571461 AGCAATCTCATTTCAAGACTAAATCA 57.429 30.769 0.00 0.00 0.00 2.57
4909 8491 9.186837 AGCAATCTCATTTCAAGACTAAATCAT 57.813 29.630 0.00 0.00 0.00 2.45
4910 8492 9.798994 GCAATCTCATTTCAAGACTAAATCATT 57.201 29.630 0.00 0.00 0.00 2.57
4950 8532 7.979786 TTCAAGACTAAATCATACTCCCTCT 57.020 36.000 0.00 0.00 0.00 3.69
5127 8711 1.586422 CACCAGTGACACACTTCCAG 58.414 55.000 8.59 0.00 42.59 3.86
5208 8792 3.449746 TCTAAAGGGGTGATTTGTGGG 57.550 47.619 0.00 0.00 0.00 4.61
5635 9227 2.908428 TGGGTGCTGTTGCTGCAG 60.908 61.111 10.11 10.11 38.86 4.41
5645 9237 2.615447 CTGTTGCTGCAGAGAAGTTTGA 59.385 45.455 20.43 0.00 38.70 2.69
5701 9293 5.617252 CAGCGGGGAAGGTATATTCTTTTA 58.383 41.667 0.00 0.00 0.00 1.52
5747 9340 2.305858 AGTTTGTACTCCCTCCGTCT 57.694 50.000 0.00 0.00 0.00 4.18
5762 9355 6.096987 TCCCTCCGTCTCATAATATAAGATGC 59.903 42.308 0.00 0.00 0.00 3.91
5768 9361 9.509855 CCGTCTCATAATATAAGATGCTCTTAC 57.490 37.037 7.50 0.00 41.27 2.34
5781 9374 8.894768 AAGATGCTCTTACAACCAATATACTC 57.105 34.615 0.00 0.00 34.42 2.59
5823 9416 5.867716 ACATCTTATATTATGGGACGAACGC 59.132 40.000 0.00 0.00 0.00 4.84
5824 9417 4.813027 TCTTATATTATGGGACGAACGCC 58.187 43.478 0.00 0.00 0.00 5.68
5826 9419 1.031235 TATTATGGGACGAACGCCGA 58.969 50.000 4.79 0.00 41.76 5.54
5827 9420 0.176219 ATTATGGGACGAACGCCGAA 59.824 50.000 4.79 0.00 41.76 4.30
5828 9421 0.458889 TTATGGGACGAACGCCGAAG 60.459 55.000 4.79 0.00 41.76 3.79
5875 9468 2.076100 TGACAAAGCTATGCGAACAGG 58.924 47.619 0.00 0.00 0.00 4.00
5877 9470 2.939103 GACAAAGCTATGCGAACAGGAT 59.061 45.455 0.00 0.00 34.41 3.24
5990 9583 4.466015 GGCTAAGAAATCCACCCAAATTCA 59.534 41.667 0.00 0.00 0.00 2.57
6044 9644 3.610114 GCAGAACAAGGTATGCAACACAG 60.610 47.826 0.00 0.00 38.54 3.66
6074 9674 8.321353 ACCTTGAATTCTAGTGATGTGATACAA 58.679 33.333 14.52 0.00 0.00 2.41
6075 9675 8.607459 CCTTGAATTCTAGTGATGTGATACAAC 58.393 37.037 14.52 0.00 0.00 3.32
6141 9742 6.901751 ACAAATATGTATTGCACACAGCATGG 60.902 38.462 6.49 0.14 45.90 3.66
6215 9875 1.525077 AACAAAGGCGCGAGGACAA 60.525 52.632 12.10 0.00 0.00 3.18
6280 9990 6.288941 TCCACCATCGTTGTTATCTTCTTA 57.711 37.500 0.00 0.00 0.00 2.10
6326 10036 3.755112 TGGTGTCGAGAAACATTACCA 57.245 42.857 0.00 0.00 0.00 3.25
6363 10093 0.105194 TGTTGACCTGGAGGAGTGGA 60.105 55.000 0.00 0.00 38.94 4.02
6432 10186 4.581824 TGTTGAAGATGCTTCTTTTGAGCT 59.418 37.500 15.34 0.00 42.34 4.09
6480 10234 1.485838 CCGCTGCTATCTCTTGTGCG 61.486 60.000 0.00 0.00 41.30 5.34
6532 10286 2.028567 TCATGGTGATGTAGTCGTTGCA 60.029 45.455 0.00 0.00 0.00 4.08
6548 10302 3.425713 CAGACGCATTGTGCCGCT 61.426 61.111 0.00 0.00 41.12 5.52
6550 10304 2.255252 GACGCATTGTGCCGCTTT 59.745 55.556 0.00 0.00 41.12 3.51
6617 10371 5.607939 TCAGACTTAAAACTGGACAGTGA 57.392 39.130 5.63 0.00 41.58 3.41
6625 10379 7.990886 ACTTAAAACTGGACAGTGAGTTGATTA 59.009 33.333 5.63 0.00 41.58 1.75
6627 10381 4.273148 ACTGGACAGTGAGTTGATTACC 57.727 45.455 3.82 0.00 40.75 2.85
6632 10386 2.635915 ACAGTGAGTTGATTACCGGGAA 59.364 45.455 0.00 0.00 0.00 3.97
6633 10387 3.000727 CAGTGAGTTGATTACCGGGAAC 58.999 50.000 0.00 0.00 0.00 3.62
6634 10388 2.635915 AGTGAGTTGATTACCGGGAACA 59.364 45.455 0.00 0.00 0.00 3.18
6635 10389 3.263425 AGTGAGTTGATTACCGGGAACAT 59.737 43.478 0.00 0.00 0.00 2.71
6636 10390 3.621715 GTGAGTTGATTACCGGGAACATC 59.378 47.826 0.00 0.00 0.00 3.06
6637 10391 3.262151 TGAGTTGATTACCGGGAACATCA 59.738 43.478 0.00 0.00 0.00 3.07
6639 10393 2.943033 GTTGATTACCGGGAACATCAGG 59.057 50.000 0.00 0.00 0.00 3.86
6640 10394 1.488812 TGATTACCGGGAACATCAGGG 59.511 52.381 0.00 0.00 0.00 4.45
6641 10395 0.843984 ATTACCGGGAACATCAGGGG 59.156 55.000 0.00 0.00 0.00 4.79
6642 10396 1.276140 TTACCGGGAACATCAGGGGG 61.276 60.000 6.32 0.00 0.00 5.40
6670 10424 4.188462 TGTAAAATAGCATGACGGACCAG 58.812 43.478 0.00 0.00 0.00 4.00
6680 10434 4.742440 GCATGACGGACCAGGAATACATAA 60.742 45.833 0.00 0.00 0.00 1.90
6684 10438 6.419791 TGACGGACCAGGAATACATAATTTT 58.580 36.000 0.00 0.00 0.00 1.82
6685 10439 6.887545 TGACGGACCAGGAATACATAATTTTT 59.112 34.615 0.00 0.00 0.00 1.94
6731 10486 2.070890 CTAGCTTCGCGTGCATGTCG 62.071 60.000 23.28 11.61 0.00 4.35
7195 11016 4.400845 CAACATGATCTCGCTTTGAAGTG 58.599 43.478 0.00 0.00 37.87 3.16
7216 11040 5.248477 AGTGCCTATAAACAGGTCTCTGAAA 59.752 40.000 0.00 0.00 43.49 2.69
7281 11105 6.658816 TCATGATTCCTGCTGCTTTTTAACTA 59.341 34.615 0.00 0.00 0.00 2.24
7351 11176 9.831737 GCCATACAGATGTTCATCATTATTAAC 57.168 33.333 14.05 0.00 36.83 2.01
7500 11326 2.070783 CATCCAACCAAAACATGCAGC 58.929 47.619 0.00 0.00 0.00 5.25
7515 11341 1.151668 GCAGCGTGTTCATCTGAAGT 58.848 50.000 0.00 0.00 34.27 3.01
7518 11344 3.372206 GCAGCGTGTTCATCTGAAGTATT 59.628 43.478 0.00 0.00 34.27 1.89
7567 11393 7.747799 GCTTCGGGTTTATCTGTTTTTACTTAC 59.252 37.037 0.00 0.00 0.00 2.34
7570 11396 6.147656 CGGGTTTATCTGTTTTTACTTACGGT 59.852 38.462 0.00 0.00 0.00 4.83
7572 11398 8.443160 GGGTTTATCTGTTTTTACTTACGGTAC 58.557 37.037 0.00 0.00 0.00 3.34
7596 11422 6.071221 ACACGGTCGGCTATAAATCCAATATA 60.071 38.462 0.00 0.00 0.00 0.86
7598 11424 7.010183 CACGGTCGGCTATAAATCCAATATAAG 59.990 40.741 0.00 0.00 0.00 1.73
7648 11478 5.924475 ATTAATTTACTCGGCGAGGATTG 57.076 39.130 36.81 16.25 33.35 2.67
7665 11495 5.694995 AGGATTGGTATTCGTCCATTCATT 58.305 37.500 0.00 0.00 37.19 2.57
7673 11503 7.155328 GGTATTCGTCCATTCATTGAGATAGT 58.845 38.462 0.00 0.00 0.00 2.12
7775 11610 1.363744 CTTCTCTAGGCTGCAAACGG 58.636 55.000 0.50 0.00 0.00 4.44
7790 11626 0.250124 AACGGATCGGCAACTGTTCA 60.250 50.000 0.00 0.00 31.09 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 5.261209 TGTTTTCTTTCATGGACACAAGG 57.739 39.130 0.00 0.00 0.00 3.61
22 23 7.805071 CAGACATACTTGTTTTCTTTCATGGAC 59.195 37.037 0.00 0.00 35.79 4.02
23 24 7.522073 GCAGACATACTTGTTTTCTTTCATGGA 60.522 37.037 0.00 0.00 35.79 3.41
24 25 6.583806 GCAGACATACTTGTTTTCTTTCATGG 59.416 38.462 0.00 0.00 35.79 3.66
25 26 7.140705 TGCAGACATACTTGTTTTCTTTCATG 58.859 34.615 0.00 0.00 35.79 3.07
26 27 7.229306 TCTGCAGACATACTTGTTTTCTTTCAT 59.771 33.333 13.74 0.00 35.79 2.57
27 28 6.542005 TCTGCAGACATACTTGTTTTCTTTCA 59.458 34.615 13.74 0.00 35.79 2.69
28 29 6.959361 TCTGCAGACATACTTGTTTTCTTTC 58.041 36.000 13.74 0.00 35.79 2.62
29 30 6.942532 TCTGCAGACATACTTGTTTTCTTT 57.057 33.333 13.74 0.00 35.79 2.52
30 31 7.516198 AATCTGCAGACATACTTGTTTTCTT 57.484 32.000 20.97 0.61 35.79 2.52
31 32 7.516198 AAATCTGCAGACATACTTGTTTTCT 57.484 32.000 20.97 0.00 35.79 2.52
32 33 7.862372 TGAAAATCTGCAGACATACTTGTTTTC 59.138 33.333 26.28 26.28 35.79 2.29
40 41 3.691118 TGGCTGAAAATCTGCAGACATAC 59.309 43.478 20.97 11.77 44.79 2.39
41 42 3.954200 TGGCTGAAAATCTGCAGACATA 58.046 40.909 20.97 0.00 44.79 2.29
48 49 0.449388 CCGTCTGGCTGAAAATCTGC 59.551 55.000 0.00 1.11 40.10 4.26
238 239 1.535462 CACCCCTTTTAAGTGCGTGAG 59.465 52.381 0.00 0.00 0.00 3.51
373 374 3.458163 CCGGCTAGGGTTCGCTGA 61.458 66.667 0.00 0.00 34.47 4.26
399 421 4.951963 GGGCCTCGCTCGATTCGG 62.952 72.222 0.84 0.00 0.00 4.30
410 432 4.162690 AATCTGGACGCGGGCCTC 62.163 66.667 12.47 0.00 0.00 4.70
411 433 4.162690 GAATCTGGACGCGGGCCT 62.163 66.667 12.47 0.00 0.00 5.19
525 551 3.849951 ATCGCCGCGATCCACCTT 61.850 61.111 22.39 0.00 43.45 3.50
529 555 4.284860 CCTCATCGCCGCGATCCA 62.285 66.667 25.03 13.64 45.19 3.41
594 620 3.866582 CTCTGACCCATCCGCCCC 61.867 72.222 0.00 0.00 0.00 5.80
879 3268 1.620822 GCCTGATCACAAGTTGGGTT 58.379 50.000 4.74 0.00 0.00 4.11
1067 3476 2.106684 AGTGAGAGGAGGGGTTTTGAAC 59.893 50.000 0.00 0.00 0.00 3.18
1142 3551 2.436173 AGTAGTAGGCTGCCAAATCTCC 59.564 50.000 22.65 4.39 0.00 3.71
1180 3589 9.204570 TGTAGTGCAATCTCTAAAAAGACTTAC 57.795 33.333 0.00 0.00 0.00 2.34
1182 3591 8.677148 TTGTAGTGCAATCTCTAAAAAGACTT 57.323 30.769 0.00 0.00 31.07 3.01
1205 3614 9.955208 TGTCTATATACAACCGTATGTAGTTTG 57.045 33.333 12.97 0.00 44.28 2.93
1207 3616 9.123902 TGTGTCTATATACAACCGTATGTAGTT 57.876 33.333 12.97 0.00 44.28 2.24
1227 3637 8.768397 TGAATCTACACCCTAAAATATGTGTCT 58.232 33.333 0.00 0.00 41.76 3.41
1228 3638 8.827677 GTGAATCTACACCCTAAAATATGTGTC 58.172 37.037 0.00 0.00 41.76 3.67
1229 3639 8.548877 AGTGAATCTACACCCTAAAATATGTGT 58.451 33.333 0.00 0.00 43.76 3.72
1230 3640 8.964476 AGTGAATCTACACCCTAAAATATGTG 57.036 34.615 0.00 0.00 41.12 3.21
1231 3641 8.768397 TGAGTGAATCTACACCCTAAAATATGT 58.232 33.333 0.00 0.00 41.12 2.29
1232 3642 9.784531 ATGAGTGAATCTACACCCTAAAATATG 57.215 33.333 0.00 0.00 41.12 1.78
1235 3645 9.533831 AAAATGAGTGAATCTACACCCTAAAAT 57.466 29.630 0.00 0.00 41.12 1.82
1236 3646 8.792633 CAAAATGAGTGAATCTACACCCTAAAA 58.207 33.333 0.00 0.00 41.12 1.52
1237 3647 7.094377 GCAAAATGAGTGAATCTACACCCTAAA 60.094 37.037 0.00 0.00 41.12 1.85
1238 3648 6.374333 GCAAAATGAGTGAATCTACACCCTAA 59.626 38.462 0.00 0.00 41.12 2.69
1239 3649 5.880332 GCAAAATGAGTGAATCTACACCCTA 59.120 40.000 0.00 0.00 41.12 3.53
1240 3650 4.702131 GCAAAATGAGTGAATCTACACCCT 59.298 41.667 0.00 0.00 41.12 4.34
1241 3651 4.702131 AGCAAAATGAGTGAATCTACACCC 59.298 41.667 0.00 0.00 41.12 4.61
1242 3652 5.886960 AGCAAAATGAGTGAATCTACACC 57.113 39.130 0.00 0.00 41.12 4.16
1243 3653 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
1244 3654 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
1245 3655 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
1246 3656 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
1247 3657 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
1248 3658 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
1249 3659 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
1250 3660 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
1251 3661 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
1252 3662 6.408858 ACTACATACGAAGCAAAATGAGTG 57.591 37.500 0.00 0.00 0.00 3.51
1253 3663 5.581085 GGACTACATACGAAGCAAAATGAGT 59.419 40.000 0.00 0.00 0.00 3.41
1254 3664 5.580691 TGGACTACATACGAAGCAAAATGAG 59.419 40.000 0.00 0.00 0.00 2.90
1255 3665 5.350365 GTGGACTACATACGAAGCAAAATGA 59.650 40.000 0.00 0.00 0.00 2.57
1256 3666 5.121611 TGTGGACTACATACGAAGCAAAATG 59.878 40.000 0.00 0.00 33.42 2.32
1257 3667 5.242434 TGTGGACTACATACGAAGCAAAAT 58.758 37.500 0.00 0.00 33.42 1.82
1258 3668 4.633175 TGTGGACTACATACGAAGCAAAA 58.367 39.130 0.00 0.00 33.42 2.44
1259 3669 4.260139 TGTGGACTACATACGAAGCAAA 57.740 40.909 0.00 0.00 33.42 3.68
1260 3670 3.945981 TGTGGACTACATACGAAGCAA 57.054 42.857 0.00 0.00 33.42 3.91
1261 3671 3.945981 TTGTGGACTACATACGAAGCA 57.054 42.857 0.00 0.00 39.48 3.91
1262 3672 3.555956 CCATTGTGGACTACATACGAAGC 59.444 47.826 0.00 0.00 40.96 3.86
1263 3673 5.006153 TCCATTGTGGACTACATACGAAG 57.994 43.478 0.00 0.00 42.67 3.79
1293 3703 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1294 3704 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1295 3705 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1296 3706 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1297 3707 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1298 3708 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1299 3709 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1300 3710 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1302 3712 9.417561 CATATACTCCCTCCGTTCCTAAATATA 57.582 37.037 0.00 0.00 0.00 0.86
1303 3713 7.147707 GCATATACTCCCTCCGTTCCTAAATAT 60.148 40.741 0.00 0.00 0.00 1.28
1304 3714 6.154021 GCATATACTCCCTCCGTTCCTAAATA 59.846 42.308 0.00 0.00 0.00 1.40
1305 3715 5.046520 GCATATACTCCCTCCGTTCCTAAAT 60.047 44.000 0.00 0.00 0.00 1.40
1306 3716 4.282703 GCATATACTCCCTCCGTTCCTAAA 59.717 45.833 0.00 0.00 0.00 1.85
1307 3717 3.830755 GCATATACTCCCTCCGTTCCTAA 59.169 47.826 0.00 0.00 0.00 2.69
1308 3718 3.428532 GCATATACTCCCTCCGTTCCTA 58.571 50.000 0.00 0.00 0.00 2.94
1309 3719 2.249139 GCATATACTCCCTCCGTTCCT 58.751 52.381 0.00 0.00 0.00 3.36
1310 3720 1.067776 CGCATATACTCCCTCCGTTCC 60.068 57.143 0.00 0.00 0.00 3.62
1311 3721 1.884579 TCGCATATACTCCCTCCGTTC 59.115 52.381 0.00 0.00 0.00 3.95
1312 3722 1.991121 TCGCATATACTCCCTCCGTT 58.009 50.000 0.00 0.00 0.00 4.44
1313 3723 2.217510 ATCGCATATACTCCCTCCGT 57.782 50.000 0.00 0.00 0.00 4.69
1314 3724 4.920640 ATTATCGCATATACTCCCTCCG 57.079 45.455 0.00 0.00 0.00 4.63
1315 3725 9.915629 CTAATTATTATCGCATATACTCCCTCC 57.084 37.037 0.00 0.00 0.00 4.30
1325 3735 9.387257 TCGAGGAGTACTAATTATTATCGCATA 57.613 33.333 0.00 0.00 0.00 3.14
1326 3736 8.277490 TCGAGGAGTACTAATTATTATCGCAT 57.723 34.615 0.00 0.00 0.00 4.73
1327 3737 7.677454 TCGAGGAGTACTAATTATTATCGCA 57.323 36.000 0.00 0.00 0.00 5.10
1346 3756 5.471797 TCTCATGAAGCTAGAGTTATCGAGG 59.528 44.000 0.00 0.00 0.00 4.63
1349 3759 5.471797 TCCTCTCATGAAGCTAGAGTTATCG 59.528 44.000 9.14 0.00 35.93 2.92
1350 3760 6.892658 TCCTCTCATGAAGCTAGAGTTATC 57.107 41.667 9.14 0.00 35.93 1.75
1351 3761 6.838612 ACTTCCTCTCATGAAGCTAGAGTTAT 59.161 38.462 9.14 0.00 42.35 1.89
1352 3762 6.191315 ACTTCCTCTCATGAAGCTAGAGTTA 58.809 40.000 9.14 0.00 42.35 2.24
1353 3763 5.022787 ACTTCCTCTCATGAAGCTAGAGTT 58.977 41.667 9.14 0.00 42.35 3.01
1356 3766 7.667575 AAATACTTCCTCTCATGAAGCTAGA 57.332 36.000 0.00 0.00 42.35 2.43
1401 3895 4.800784 ACCGAAAACCAAACATATTTCCG 58.199 39.130 0.00 0.00 0.00 4.30
1545 4041 5.297029 AGACAAACTCCTGCTTTAAGTTCAC 59.703 40.000 0.00 0.00 32.24 3.18
1565 4212 4.974645 ACAACTCTGACCCAATAAGACA 57.025 40.909 0.00 0.00 0.00 3.41
1566 4213 7.606456 TGATTTACAACTCTGACCCAATAAGAC 59.394 37.037 0.00 0.00 0.00 3.01
1578 4243 8.131100 ACAGACAACAAATGATTTACAACTCTG 58.869 33.333 0.00 1.11 0.00 3.35
1581 4246 8.465999 TCAACAGACAACAAATGATTTACAACT 58.534 29.630 0.00 0.00 0.00 3.16
1591 4256 3.985279 CCTGCATCAACAGACAACAAATG 59.015 43.478 0.00 0.00 40.25 2.32
1592 4257 3.890756 TCCTGCATCAACAGACAACAAAT 59.109 39.130 0.00 0.00 40.25 2.32
1595 4260 2.158769 AGTCCTGCATCAACAGACAACA 60.159 45.455 0.00 0.00 40.25 3.33
1678 4343 2.563179 TGCCAACCTCTACAGAGTCTTC 59.437 50.000 5.56 0.00 40.48 2.87
1683 4348 3.007398 AGAAGTTGCCAACCTCTACAGAG 59.993 47.826 6.92 0.00 41.71 3.35
1685 4350 3.409026 AGAAGTTGCCAACCTCTACAG 57.591 47.619 6.92 0.00 30.61 2.74
1712 4377 4.135747 TCATGCAGTACAATGAATCGGA 57.864 40.909 0.00 0.00 0.00 4.55
1743 4408 7.037438 AGAATTACGAAGACGGCATTTACTTA 58.963 34.615 0.00 0.00 44.46 2.24
1774 4440 5.446143 TGACGATTGCTGTTGGTAAAAAT 57.554 34.783 0.00 0.00 0.00 1.82
2645 5410 3.871006 TCACAGATTATTGCACGCTTAGG 59.129 43.478 0.00 0.00 0.00 2.69
2652 5417 8.025445 AGAAATTCAACTCACAGATTATTGCAC 58.975 33.333 0.00 0.00 0.00 4.57
2664 5429 8.321005 GCAAAACTTGTTAGAAATTCAACTCAC 58.679 33.333 0.00 0.00 0.00 3.51
3191 6433 9.262472 GTAAGCGACATTACAAAAGTCAAATAG 57.738 33.333 0.00 0.00 36.00 1.73
3199 6441 4.693566 TGGAGGTAAGCGACATTACAAAAG 59.306 41.667 7.59 0.00 37.38 2.27
4056 7583 6.938507 AGACATATTTTGTTCATGTGCCATT 58.061 32.000 0.00 0.00 39.18 3.16
4078 7605 3.136443 TGACTCAAGGCAGAAGGAAAAGA 59.864 43.478 0.00 0.00 0.00 2.52
4085 7614 1.345741 TGTCCTGACTCAAGGCAGAAG 59.654 52.381 14.60 0.00 37.24 2.85
4267 7812 2.532843 AGCATTTGAGACATGGCCTTT 58.467 42.857 3.32 0.00 0.00 3.11
4268 7813 2.226962 AGCATTTGAGACATGGCCTT 57.773 45.000 3.32 0.00 0.00 4.35
4287 7832 4.993028 AGGTAGCCAACATTCTTGGTTAA 58.007 39.130 1.22 0.00 41.53 2.01
4288 7833 4.650972 AGGTAGCCAACATTCTTGGTTA 57.349 40.909 1.22 0.00 41.53 2.85
4289 7834 3.525800 AGGTAGCCAACATTCTTGGTT 57.474 42.857 1.22 0.00 41.53 3.67
4290 7835 3.054361 CCTAGGTAGCCAACATTCTTGGT 60.054 47.826 0.00 0.00 41.53 3.67
4291 7836 3.054361 ACCTAGGTAGCCAACATTCTTGG 60.054 47.826 14.41 0.00 42.37 3.61
4292 7837 4.080863 AGACCTAGGTAGCCAACATTCTTG 60.081 45.833 16.29 0.00 0.00 3.02
4293 7838 4.104831 AGACCTAGGTAGCCAACATTCTT 58.895 43.478 16.29 0.00 0.00 2.52
4294 7839 3.725634 AGACCTAGGTAGCCAACATTCT 58.274 45.455 16.29 0.00 0.00 2.40
4295 7840 4.489306 AAGACCTAGGTAGCCAACATTC 57.511 45.455 16.29 0.00 0.00 2.67
4296 7841 4.929146 AAAGACCTAGGTAGCCAACATT 57.071 40.909 16.29 0.00 0.00 2.71
4297 7842 4.929146 AAAAGACCTAGGTAGCCAACAT 57.071 40.909 16.29 0.00 0.00 2.71
4298 7843 4.717279 AAAAAGACCTAGGTAGCCAACA 57.283 40.909 16.29 0.00 0.00 3.33
4317 7862 8.740906 TGGTGTCACATAAACTGTAAAGAAAAA 58.259 29.630 5.12 0.00 35.91 1.94
4318 7863 8.282455 TGGTGTCACATAAACTGTAAAGAAAA 57.718 30.769 5.12 0.00 35.91 2.29
4319 7864 7.867305 TGGTGTCACATAAACTGTAAAGAAA 57.133 32.000 5.12 0.00 35.91 2.52
4320 7865 7.867305 TTGGTGTCACATAAACTGTAAAGAA 57.133 32.000 5.12 0.00 35.91 2.52
4321 7866 7.867305 TTTGGTGTCACATAAACTGTAAAGA 57.133 32.000 5.12 0.00 35.91 2.52
4322 7867 8.918961 TTTTTGGTGTCACATAAACTGTAAAG 57.081 30.769 5.12 0.00 35.91 1.85
4323 7868 9.307121 CATTTTTGGTGTCACATAAACTGTAAA 57.693 29.630 5.12 0.00 35.91 2.01
4324 7869 7.923344 CCATTTTTGGTGTCACATAAACTGTAA 59.077 33.333 5.12 0.00 35.91 2.41
4325 7870 7.068839 ACCATTTTTGGTGTCACATAAACTGTA 59.931 33.333 5.12 0.00 41.33 2.74
4326 7871 6.127196 ACCATTTTTGGTGTCACATAAACTGT 60.127 34.615 5.12 1.15 41.33 3.55
4327 7872 6.279882 ACCATTTTTGGTGTCACATAAACTG 58.720 36.000 5.12 8.39 41.33 3.16
4328 7873 6.478512 ACCATTTTTGGTGTCACATAAACT 57.521 33.333 5.12 0.00 41.33 2.66
4329 7874 7.870445 ACATACCATTTTTGGTGTCACATAAAC 59.130 33.333 7.90 0.00 43.03 2.01
4330 7875 7.957002 ACATACCATTTTTGGTGTCACATAAA 58.043 30.769 7.90 3.14 43.03 1.40
4331 7876 7.531857 ACATACCATTTTTGGTGTCACATAA 57.468 32.000 7.90 0.00 43.03 1.90
4332 7877 6.128145 CGACATACCATTTTTGGTGTCACATA 60.128 38.462 7.90 0.00 43.03 2.29
4333 7878 5.335583 CGACATACCATTTTTGGTGTCACAT 60.336 40.000 7.90 0.00 43.03 3.21
4334 7879 4.023622 CGACATACCATTTTTGGTGTCACA 60.024 41.667 7.90 0.00 43.03 3.58
4335 7880 4.472286 CGACATACCATTTTTGGTGTCAC 58.528 43.478 7.90 0.00 43.03 3.67
4336 7881 3.504134 CCGACATACCATTTTTGGTGTCA 59.496 43.478 7.90 0.00 43.03 3.58
4337 7882 3.504520 ACCGACATACCATTTTTGGTGTC 59.495 43.478 7.90 6.77 43.03 3.67
4338 7883 3.492337 ACCGACATACCATTTTTGGTGT 58.508 40.909 7.90 0.00 43.03 4.16
4339 7884 4.513198 AACCGACATACCATTTTTGGTG 57.487 40.909 7.90 0.00 43.03 4.17
4340 7885 5.538849 AAAACCGACATACCATTTTTGGT 57.461 34.783 2.81 2.81 45.46 3.67
4341 7886 8.541133 AATTAAAACCGACATACCATTTTTGG 57.459 30.769 0.00 0.00 0.00 3.28
4346 7891 9.675464 TCTTCTAATTAAAACCGACATACCATT 57.325 29.630 0.00 0.00 0.00 3.16
4347 7892 9.847224 ATCTTCTAATTAAAACCGACATACCAT 57.153 29.630 0.00 0.00 0.00 3.55
4353 7898 8.938906 GGTTGTATCTTCTAATTAAAACCGACA 58.061 33.333 0.00 0.00 0.00 4.35
4357 7902 8.938906 TCACGGTTGTATCTTCTAATTAAAACC 58.061 33.333 0.00 0.00 32.93 3.27
4358 7903 9.968743 CTCACGGTTGTATCTTCTAATTAAAAC 57.031 33.333 0.00 0.00 0.00 2.43
4359 7904 8.662141 GCTCACGGTTGTATCTTCTAATTAAAA 58.338 33.333 0.00 0.00 0.00 1.52
4360 7905 7.820386 TGCTCACGGTTGTATCTTCTAATTAAA 59.180 33.333 0.00 0.00 0.00 1.52
4361 7906 7.277098 GTGCTCACGGTTGTATCTTCTAATTAA 59.723 37.037 0.00 0.00 0.00 1.40
4362 7907 6.755141 GTGCTCACGGTTGTATCTTCTAATTA 59.245 38.462 0.00 0.00 0.00 1.40
4363 7908 5.581085 GTGCTCACGGTTGTATCTTCTAATT 59.419 40.000 0.00 0.00 0.00 1.40
4364 7909 5.109903 GTGCTCACGGTTGTATCTTCTAAT 58.890 41.667 0.00 0.00 0.00 1.73
4365 7910 4.021807 TGTGCTCACGGTTGTATCTTCTAA 60.022 41.667 0.00 0.00 0.00 2.10
4366 7911 3.508402 TGTGCTCACGGTTGTATCTTCTA 59.492 43.478 0.00 0.00 0.00 2.10
4367 7912 2.299013 TGTGCTCACGGTTGTATCTTCT 59.701 45.455 0.00 0.00 0.00 2.85
4368 7913 2.412089 GTGTGCTCACGGTTGTATCTTC 59.588 50.000 2.72 0.00 34.79 2.87
4369 7914 2.413837 GTGTGCTCACGGTTGTATCTT 58.586 47.619 2.72 0.00 34.79 2.40
4370 7915 2.080286 GTGTGCTCACGGTTGTATCT 57.920 50.000 2.72 0.00 34.79 1.98
4380 7925 1.009675 CTTTGTGGCGTGTGCTCAC 60.010 57.895 8.86 8.86 42.25 3.51
4381 7926 2.186160 CCTTTGTGGCGTGTGCTCA 61.186 57.895 0.00 0.00 42.25 4.26
4382 7927 2.639286 CCTTTGTGGCGTGTGCTC 59.361 61.111 0.00 0.00 42.25 4.26
4391 7936 1.619654 TTGAGACATGGCCTTTGTGG 58.380 50.000 15.43 0.00 39.35 4.17
4392 7937 2.605338 CGTTTGAGACATGGCCTTTGTG 60.605 50.000 15.43 6.56 0.00 3.33
4393 7938 1.608590 CGTTTGAGACATGGCCTTTGT 59.391 47.619 11.13 11.13 0.00 2.83
4394 7939 1.666888 GCGTTTGAGACATGGCCTTTG 60.667 52.381 3.32 4.28 0.00 2.77
4395 7940 0.598065 GCGTTTGAGACATGGCCTTT 59.402 50.000 3.32 0.00 0.00 3.11
4396 7941 1.577328 CGCGTTTGAGACATGGCCTT 61.577 55.000 3.32 0.00 0.00 4.35
4397 7942 2.034879 CGCGTTTGAGACATGGCCT 61.035 57.895 3.32 0.00 0.00 5.19
4398 7943 2.480555 CGCGTTTGAGACATGGCC 59.519 61.111 0.00 0.00 0.00 5.36
4399 7944 2.480555 CCGCGTTTGAGACATGGC 59.519 61.111 4.92 0.00 0.00 4.40
4400 7945 2.398554 CCCCGCGTTTGAGACATGG 61.399 63.158 4.92 0.00 0.00 3.66
4401 7946 1.671054 ACCCCGCGTTTGAGACATG 60.671 57.895 4.92 0.00 0.00 3.21
4402 7947 1.671054 CACCCCGCGTTTGAGACAT 60.671 57.895 4.92 0.00 0.00 3.06
4403 7948 2.280524 CACCCCGCGTTTGAGACA 60.281 61.111 4.92 0.00 0.00 3.41
4404 7949 3.047877 CCACCCCGCGTTTGAGAC 61.048 66.667 4.92 0.00 0.00 3.36
4405 7950 4.323477 CCCACCCCGCGTTTGAGA 62.323 66.667 4.92 0.00 0.00 3.27
4415 7960 4.720680 AATTGCCCAGCCCACCCC 62.721 66.667 0.00 0.00 0.00 4.95
4416 7961 3.393106 CAATTGCCCAGCCCACCC 61.393 66.667 0.00 0.00 0.00 4.61
4499 8052 6.980978 ACATAACGTCTGGTTGAGATTCATAG 59.019 38.462 0.00 0.00 39.75 2.23
4500 8053 6.873997 ACATAACGTCTGGTTGAGATTCATA 58.126 36.000 0.00 0.00 39.75 2.15
4750 8332 5.836358 GGACAGAGGGAGTATGATTTAGTCT 59.164 44.000 0.00 0.00 0.00 3.24
4752 8334 4.902448 GGGACAGAGGGAGTATGATTTAGT 59.098 45.833 0.00 0.00 0.00 2.24
4753 8335 4.901849 TGGGACAGAGGGAGTATGATTTAG 59.098 45.833 0.00 0.00 0.00 1.85
4754 8336 4.890988 TGGGACAGAGGGAGTATGATTTA 58.109 43.478 0.00 0.00 0.00 1.40
4756 8338 3.421394 TGGGACAGAGGGAGTATGATT 57.579 47.619 0.00 0.00 0.00 2.57
4759 8341 5.832539 ATTATTGGGACAGAGGGAGTATG 57.167 43.478 0.00 0.00 42.39 2.39
4760 8342 9.273137 CTTATATTATTGGGACAGAGGGAGTAT 57.727 37.037 0.00 0.00 42.39 2.12
4763 8345 7.798710 TCTTATATTATTGGGACAGAGGGAG 57.201 40.000 0.00 0.00 42.39 4.30
4764 8346 7.124298 CGATCTTATATTATTGGGACAGAGGGA 59.876 40.741 0.00 0.00 42.39 4.20
4765 8347 7.093289 ACGATCTTATATTATTGGGACAGAGGG 60.093 40.741 0.00 0.00 42.39 4.30
4766 8348 7.841956 ACGATCTTATATTATTGGGACAGAGG 58.158 38.462 0.00 0.00 42.39 3.69
4767 8349 9.712305 AAACGATCTTATATTATTGGGACAGAG 57.288 33.333 0.00 0.00 42.39 3.35
4787 8369 9.490379 GGGAGTATGATTTAGTGATAAAACGAT 57.510 33.333 0.00 0.00 0.00 3.73
4788 8370 8.701895 AGGGAGTATGATTTAGTGATAAAACGA 58.298 33.333 0.00 0.00 0.00 3.85
4789 8371 8.888579 AGGGAGTATGATTTAGTGATAAAACG 57.111 34.615 0.00 0.00 0.00 3.60
4792 8374 9.213777 ACAGAGGGAGTATGATTTAGTGATAAA 57.786 33.333 0.00 0.00 0.00 1.40
4793 8375 8.783660 ACAGAGGGAGTATGATTTAGTGATAA 57.216 34.615 0.00 0.00 0.00 1.75
4794 8376 7.451877 GGACAGAGGGAGTATGATTTAGTGATA 59.548 40.741 0.00 0.00 0.00 2.15
4795 8377 6.268847 GGACAGAGGGAGTATGATTTAGTGAT 59.731 42.308 0.00 0.00 0.00 3.06
4796 8378 5.598830 GGACAGAGGGAGTATGATTTAGTGA 59.401 44.000 0.00 0.00 0.00 3.41
4797 8379 5.221541 GGGACAGAGGGAGTATGATTTAGTG 60.222 48.000 0.00 0.00 0.00 2.74
4798 8380 4.902448 GGGACAGAGGGAGTATGATTTAGT 59.098 45.833 0.00 0.00 0.00 2.24
4799 8381 4.901849 TGGGACAGAGGGAGTATGATTTAG 59.098 45.833 0.00 0.00 0.00 1.85
4800 8382 4.890988 TGGGACAGAGGGAGTATGATTTA 58.109 43.478 0.00 0.00 0.00 1.40
4801 8383 3.736094 TGGGACAGAGGGAGTATGATTT 58.264 45.455 0.00 0.00 0.00 2.17
4802 8384 3.421394 TGGGACAGAGGGAGTATGATT 57.579 47.619 0.00 0.00 0.00 2.57
4828 8410 9.430623 TGATCTTTGTGTCATAAAACGATCTTA 57.569 29.630 17.52 4.41 0.00 2.10
4829 8411 8.230486 GTGATCTTTGTGTCATAAAACGATCTT 58.770 33.333 17.52 0.00 0.00 2.40
4830 8412 7.604164 AGTGATCTTTGTGTCATAAAACGATCT 59.396 33.333 17.52 4.41 0.00 2.75
4831 8413 7.743104 AGTGATCTTTGTGTCATAAAACGATC 58.257 34.615 13.17 13.17 0.00 3.69
4832 8414 7.672983 AGTGATCTTTGTGTCATAAAACGAT 57.327 32.000 0.00 0.00 0.00 3.73
4833 8415 8.596271 TTAGTGATCTTTGTGTCATAAAACGA 57.404 30.769 0.00 0.00 0.00 3.85
4834 8416 8.708742 TCTTAGTGATCTTTGTGTCATAAAACG 58.291 33.333 0.00 0.00 0.00 3.60
4850 8432 7.113684 CCGAGTGATAAAACGATCTTAGTGATC 59.886 40.741 0.00 0.00 46.07 2.92
4851 8433 6.918569 CCGAGTGATAAAACGATCTTAGTGAT 59.081 38.462 0.00 0.00 38.27 3.06
4852 8434 6.263344 CCGAGTGATAAAACGATCTTAGTGA 58.737 40.000 0.00 0.00 0.00 3.41
4853 8435 5.459107 CCCGAGTGATAAAACGATCTTAGTG 59.541 44.000 0.00 0.00 0.00 2.74
4854 8436 5.589192 CCCGAGTGATAAAACGATCTTAGT 58.411 41.667 0.00 0.00 0.00 2.24
4855 8437 4.444720 GCCCGAGTGATAAAACGATCTTAG 59.555 45.833 0.00 0.00 0.00 2.18
4856 8438 4.142116 TGCCCGAGTGATAAAACGATCTTA 60.142 41.667 0.00 0.00 0.00 2.10
4857 8439 3.195661 GCCCGAGTGATAAAACGATCTT 58.804 45.455 0.00 0.00 0.00 2.40
4858 8440 2.167693 TGCCCGAGTGATAAAACGATCT 59.832 45.455 0.00 0.00 0.00 2.75
4859 8441 2.540101 CTGCCCGAGTGATAAAACGATC 59.460 50.000 0.00 0.00 0.00 3.69
4860 8442 2.550978 CTGCCCGAGTGATAAAACGAT 58.449 47.619 0.00 0.00 0.00 3.73
4861 8443 2.004583 CTGCCCGAGTGATAAAACGA 57.995 50.000 0.00 0.00 0.00 3.85
4862 8444 0.373716 GCTGCCCGAGTGATAAAACG 59.626 55.000 0.00 0.00 0.00 3.60
4863 8445 1.739067 AGCTGCCCGAGTGATAAAAC 58.261 50.000 0.00 0.00 0.00 2.43
4864 8446 2.741878 GCTAGCTGCCCGAGTGATAAAA 60.742 50.000 7.70 0.00 35.15 1.52
4865 8447 1.202533 GCTAGCTGCCCGAGTGATAAA 60.203 52.381 7.70 0.00 35.15 1.40
4866 8448 0.389391 GCTAGCTGCCCGAGTGATAA 59.611 55.000 7.70 0.00 35.15 1.75
4867 8449 0.755327 TGCTAGCTGCCCGAGTGATA 60.755 55.000 17.23 0.00 42.00 2.15
4868 8450 1.617018 TTGCTAGCTGCCCGAGTGAT 61.617 55.000 17.23 0.00 42.00 3.06
4869 8451 1.617018 ATTGCTAGCTGCCCGAGTGA 61.617 55.000 17.23 0.00 42.00 3.41
4870 8452 1.153289 ATTGCTAGCTGCCCGAGTG 60.153 57.895 17.23 0.00 42.00 3.51
4871 8453 1.144936 GATTGCTAGCTGCCCGAGT 59.855 57.895 17.23 0.00 42.00 4.18
4872 8454 0.599728 GAGATTGCTAGCTGCCCGAG 60.600 60.000 17.23 0.00 42.00 4.63
4873 8455 1.329913 TGAGATTGCTAGCTGCCCGA 61.330 55.000 17.23 0.00 42.00 5.14
4874 8456 0.250209 ATGAGATTGCTAGCTGCCCG 60.250 55.000 17.23 0.00 42.00 6.13
4875 8457 1.978454 AATGAGATTGCTAGCTGCCC 58.022 50.000 17.23 2.69 42.00 5.36
4876 8458 2.947652 TGAAATGAGATTGCTAGCTGCC 59.052 45.455 17.23 4.54 42.00 4.85
4877 8459 4.334759 TCTTGAAATGAGATTGCTAGCTGC 59.665 41.667 17.23 5.12 43.25 5.25
4878 8460 5.585445 AGTCTTGAAATGAGATTGCTAGCTG 59.415 40.000 17.23 0.00 0.00 4.24
4879 8461 5.743117 AGTCTTGAAATGAGATTGCTAGCT 58.257 37.500 17.23 0.00 0.00 3.32
4880 8462 7.545362 TTAGTCTTGAAATGAGATTGCTAGC 57.455 36.000 8.10 8.10 0.00 3.42
4882 8464 9.671279 TGATTTAGTCTTGAAATGAGATTGCTA 57.329 29.630 0.00 0.00 0.00 3.49
4883 8465 8.571461 TGATTTAGTCTTGAAATGAGATTGCT 57.429 30.769 0.00 0.00 0.00 3.91
4884 8466 9.798994 AATGATTTAGTCTTGAAATGAGATTGC 57.201 29.630 0.00 0.00 0.00 3.56
4921 8503 9.566432 GGGAGTATGATTTAGTCTTGAAATGAT 57.434 33.333 0.00 0.00 0.00 2.45
4922 8504 8.772250 AGGGAGTATGATTTAGTCTTGAAATGA 58.228 33.333 0.00 0.00 0.00 2.57
4923 8505 8.970859 AGGGAGTATGATTTAGTCTTGAAATG 57.029 34.615 0.00 0.00 0.00 2.32
4924 8506 8.997734 AGAGGGAGTATGATTTAGTCTTGAAAT 58.002 33.333 0.00 0.00 0.00 2.17
4925 8507 8.260818 CAGAGGGAGTATGATTTAGTCTTGAAA 58.739 37.037 0.00 0.00 0.00 2.69
4926 8508 7.400339 ACAGAGGGAGTATGATTTAGTCTTGAA 59.600 37.037 0.00 0.00 0.00 2.69
4927 8509 6.897966 ACAGAGGGAGTATGATTTAGTCTTGA 59.102 38.462 0.00 0.00 0.00 3.02
4928 8510 7.118496 ACAGAGGGAGTATGATTTAGTCTTG 57.882 40.000 0.00 0.00 0.00 3.02
4929 8511 6.325286 GGACAGAGGGAGTATGATTTAGTCTT 59.675 42.308 0.00 0.00 0.00 3.01
4992 8574 7.040755 TCCGTCCCGTAATATAAGATCGTTTTA 60.041 37.037 0.00 0.00 0.00 1.52
5055 8637 6.701400 GGGAGAAATAATAATTTGTGCGCAAT 59.299 34.615 14.00 0.00 37.51 3.56
5127 8711 2.728690 TGCATTCAAGTCAACCATGC 57.271 45.000 0.00 0.00 40.61 4.06
5208 8792 7.753132 TGTTTTTCACTTGTATCAAGTGTCAAC 59.247 33.333 29.17 26.79 45.75 3.18
5403 8987 3.557595 GCAAGAAGGGTGTCGATCTATTG 59.442 47.826 0.00 0.00 0.00 1.90
5635 9227 3.807622 TCACGAACACCATCAAACTTCTC 59.192 43.478 0.00 0.00 0.00 2.87
5645 9237 0.516877 CATTGCGTCACGAACACCAT 59.483 50.000 0.00 0.00 0.00 3.55
5821 9414 3.067742 TCTTTCTAATACTCCCTTCGGCG 59.932 47.826 0.00 0.00 0.00 6.46
5823 9416 4.099573 TGCTCTTTCTAATACTCCCTTCGG 59.900 45.833 0.00 0.00 0.00 4.30
5824 9417 5.263968 TGCTCTTTCTAATACTCCCTTCG 57.736 43.478 0.00 0.00 0.00 3.79
5826 9419 6.408662 GGACATGCTCTTTCTAATACTCCCTT 60.409 42.308 0.00 0.00 0.00 3.95
5827 9420 5.071115 GGACATGCTCTTTCTAATACTCCCT 59.929 44.000 0.00 0.00 0.00 4.20
5828 9421 5.163301 TGGACATGCTCTTTCTAATACTCCC 60.163 44.000 0.00 0.00 0.00 4.30
5829 9422 5.918608 TGGACATGCTCTTTCTAATACTCC 58.081 41.667 0.00 0.00 0.00 3.85
5830 9423 7.849804 TTTGGACATGCTCTTTCTAATACTC 57.150 36.000 0.00 0.00 0.00 2.59
5831 9424 8.049117 TCATTTGGACATGCTCTTTCTAATACT 58.951 33.333 0.00 0.00 0.00 2.12
5832 9425 8.125448 GTCATTTGGACATGCTCTTTCTAATAC 58.875 37.037 0.00 0.00 46.19 1.89
5833 9426 8.213518 GTCATTTGGACATGCTCTTTCTAATA 57.786 34.615 0.00 0.00 46.19 0.98
5834 9427 7.093322 GTCATTTGGACATGCTCTTTCTAAT 57.907 36.000 0.00 0.00 46.19 1.73
5835 9428 6.500684 GTCATTTGGACATGCTCTTTCTAA 57.499 37.500 0.00 0.00 46.19 2.10
5900 9493 9.688091 AGTCCTTTTCTTCTACTTTCTCTTTTT 57.312 29.630 0.00 0.00 0.00 1.94
6017 9610 2.289133 TGCATACCTTGTTCTGCGTACA 60.289 45.455 0.00 0.00 37.44 2.90
6044 9644 8.547967 TCACATCACTAGAATTCAAGGTAAAC 57.452 34.615 8.44 0.00 0.00 2.01
6141 9742 0.597072 CGGGCGAATCTCCTAGTACC 59.403 60.000 0.00 0.00 0.00 3.34
6215 9875 1.608590 CACCGCCAACAAGTCAGATTT 59.391 47.619 0.00 0.00 0.00 2.17
6280 9990 2.673610 GCAACATCAGCGAGAAGAGACT 60.674 50.000 0.00 0.00 0.00 3.24
6363 10093 3.518303 CTGGGGCTGGTACTACTAAAGTT 59.482 47.826 0.00 0.00 39.80 2.66
6369 10099 2.570386 AATCTGGGGCTGGTACTACT 57.430 50.000 0.00 0.00 0.00 2.57
6412 10148 3.504906 CCAGCTCAAAAGAAGCATCTTCA 59.495 43.478 4.40 0.00 45.19 3.02
6457 10211 2.066393 AAGAGATAGCAGCGGGCCA 61.066 57.895 4.39 0.00 46.50 5.36
6469 10223 1.542030 ACGAGAAGACGCACAAGAGAT 59.458 47.619 0.00 0.00 36.70 2.75
6470 10224 0.952280 ACGAGAAGACGCACAAGAGA 59.048 50.000 0.00 0.00 36.70 3.10
6532 10286 2.187599 GAAAGCGGCACAATGCGTCT 62.188 55.000 1.45 0.00 46.21 4.18
6597 10351 5.615925 ACTCACTGTCCAGTTTTAAGTCT 57.384 39.130 0.00 0.00 40.20 3.24
6613 10367 2.635915 TGTTCCCGGTAATCAACTCACT 59.364 45.455 0.00 0.00 0.00 3.41
6617 10371 3.370527 CCTGATGTTCCCGGTAATCAACT 60.371 47.826 0.00 0.00 0.00 3.16
6625 10379 3.015145 CCCCCTGATGTTCCCGGT 61.015 66.667 0.00 0.00 0.00 5.28
6639 10393 4.953579 TCATGCTATTTTACAGAAACCCCC 59.046 41.667 0.00 0.00 0.00 5.40
6640 10394 5.448632 CGTCATGCTATTTTACAGAAACCCC 60.449 44.000 0.00 0.00 0.00 4.95
6641 10395 5.448632 CCGTCATGCTATTTTACAGAAACCC 60.449 44.000 0.00 0.00 0.00 4.11
6642 10396 5.353123 TCCGTCATGCTATTTTACAGAAACC 59.647 40.000 0.00 0.00 0.00 3.27
6643 10397 6.248631 GTCCGTCATGCTATTTTACAGAAAC 58.751 40.000 0.00 0.00 0.00 2.78
6649 10403 3.560068 CCTGGTCCGTCATGCTATTTTAC 59.440 47.826 0.00 0.00 0.00 2.01
6731 10486 4.388499 TTTCGCCAGGCCGACTCC 62.388 66.667 5.63 0.00 36.90 3.85
6782 10537 9.856488 AAGAGAATTTTTGTGATTCATCAGATG 57.144 29.630 3.71 3.71 37.51 2.90
7140 10936 8.727100 TGAATATATATCAAGACAGGAGTGGT 57.273 34.615 0.00 0.00 0.00 4.16
7195 11016 5.735766 AGTTTCAGAGACCTGTTTATAGGC 58.264 41.667 0.00 0.00 41.75 3.93
7216 11040 2.754946 TCAATTAGGTTTCGCGGAGT 57.245 45.000 6.13 0.00 0.00 3.85
7295 11119 8.462589 TGAAAGTACCGGGTTTTAGTTATTTT 57.537 30.769 4.31 0.00 0.00 1.82
7296 11120 8.462589 TTGAAAGTACCGGGTTTTAGTTATTT 57.537 30.769 4.31 0.00 0.00 1.40
7351 11176 4.386867 TTTCTGCAGTAGTTCCGGATAG 57.613 45.455 14.67 0.00 0.00 2.08
7355 11180 4.386867 TCTATTTCTGCAGTAGTTCCGG 57.613 45.455 14.67 0.00 0.00 5.14
7453 11279 8.464404 CATTCAACAATCTGTCCTGATAATTGT 58.536 33.333 0.00 0.00 41.09 2.71
7500 11326 7.346208 TGTTGTAATACTTCAGATGAACACG 57.654 36.000 0.00 0.00 0.00 4.49
7546 11372 7.439157 ACCGTAAGTAAAAACAGATAAACCC 57.561 36.000 0.00 0.00 0.00 4.11
7551 11377 6.806249 CCGTGTACCGTAAGTAAAAACAGATA 59.194 38.462 0.00 0.00 31.05 1.98
7567 11393 0.662619 TTATAGCCGACCGTGTACCG 59.337 55.000 0.00 0.00 0.00 4.02
7570 11396 2.957680 TGGATTTATAGCCGACCGTGTA 59.042 45.455 0.00 0.00 30.32 2.90
7572 11398 2.519377 TGGATTTATAGCCGACCGTG 57.481 50.000 0.00 0.00 30.32 4.94
7630 11456 1.485066 ACCAATCCTCGCCGAGTAAAT 59.515 47.619 13.83 0.77 0.00 1.40
7637 11467 0.249322 ACGAATACCAATCCTCGCCG 60.249 55.000 0.00 0.00 34.70 6.46
7638 11468 1.499049 GACGAATACCAATCCTCGCC 58.501 55.000 0.00 0.00 34.70 5.54
7639 11469 1.202486 TGGACGAATACCAATCCTCGC 60.202 52.381 0.00 0.00 34.70 5.03
7640 11470 2.882927 TGGACGAATACCAATCCTCG 57.117 50.000 0.00 0.00 34.25 4.63
7648 11478 7.155328 ACTATCTCAATGAATGGACGAATACC 58.845 38.462 0.00 0.00 0.00 2.73
7775 11610 4.223320 TCTTTTTGAACAGTTGCCGATC 57.777 40.909 0.00 0.00 0.00 3.69
7790 11626 7.855784 ATTTCTACATGACCCCTTTCTTTTT 57.144 32.000 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.