Multiple sequence alignment - TraesCS6D01G138700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G138700 | chr6D | 100.000 | 3900 | 0 | 0 | 1 | 3900 | 107795236 | 107799135 | 0.000000e+00 | 7203 |
1 | TraesCS6D01G138700 | chr6D | 88.057 | 494 | 48 | 4 | 1583 | 2072 | 437548889 | 437548403 | 3.380000e-160 | 575 |
2 | TraesCS6D01G138700 | chr6D | 78.719 | 484 | 72 | 20 | 1115 | 1585 | 450972853 | 450973318 | 1.060000e-75 | 294 |
3 | TraesCS6D01G138700 | chr6A | 91.088 | 3198 | 146 | 52 | 249 | 3383 | 131442582 | 131445703 | 0.000000e+00 | 4198 |
4 | TraesCS6D01G138700 | chr6A | 85.135 | 222 | 10 | 9 | 3420 | 3637 | 131445784 | 131445986 | 5.110000e-49 | 206 |
5 | TraesCS6D01G138700 | chr6A | 93.548 | 124 | 7 | 1 | 3778 | 3900 | 131446136 | 131446259 | 2.390000e-42 | 183 |
6 | TraesCS6D01G138700 | chr6A | 84.524 | 168 | 15 | 6 | 2018 | 2185 | 543496080 | 543495924 | 5.220000e-34 | 156 |
7 | TraesCS6D01G138700 | chr6A | 97.701 | 87 | 1 | 1 | 3645 | 3730 | 131446052 | 131446138 | 8.730000e-32 | 148 |
8 | TraesCS6D01G138700 | chr6A | 88.421 | 95 | 8 | 2 | 157 | 248 | 457850372 | 457850466 | 1.150000e-20 | 111 |
9 | TraesCS6D01G138700 | chr6B | 91.655 | 2948 | 147 | 36 | 215 | 3106 | 195125926 | 195128830 | 0.000000e+00 | 3989 |
10 | TraesCS6D01G138700 | chr4A | 90.015 | 1342 | 99 | 20 | 1259 | 2595 | 123928282 | 123929593 | 0.000000e+00 | 1703 |
11 | TraesCS6D01G138700 | chr4A | 88.133 | 691 | 59 | 12 | 1910 | 2594 | 344517073 | 344517746 | 0.000000e+00 | 800 |
12 | TraesCS6D01G138700 | chr4A | 88.630 | 387 | 36 | 4 | 1259 | 1645 | 344508208 | 344508586 | 7.630000e-127 | 464 |
13 | TraesCS6D01G138700 | chr4A | 92.946 | 241 | 16 | 1 | 1674 | 1913 | 344502714 | 344502954 | 2.230000e-92 | 350 |
14 | TraesCS6D01G138700 | chr4A | 91.736 | 242 | 19 | 1 | 1674 | 1914 | 344508584 | 344508825 | 6.240000e-88 | 335 |
15 | TraesCS6D01G138700 | chr7A | 91.419 | 874 | 56 | 12 | 1726 | 2595 | 39248666 | 39249524 | 0.000000e+00 | 1181 |
16 | TraesCS6D01G138700 | chr5D | 78.750 | 320 | 55 | 11 | 1115 | 1430 | 462758941 | 462759251 | 6.610000e-48 | 202 |
17 | TraesCS6D01G138700 | chr5D | 85.350 | 157 | 23 | 0 | 2274 | 2430 | 520296826 | 520296982 | 3.120000e-36 | 163 |
18 | TraesCS6D01G138700 | chr3B | 86.145 | 166 | 17 | 6 | 1004 | 1166 | 778111147 | 778111309 | 1.440000e-39 | 174 |
19 | TraesCS6D01G138700 | chr3B | 85.350 | 157 | 23 | 0 | 2274 | 2430 | 771132520 | 771132676 | 3.120000e-36 | 163 |
20 | TraesCS6D01G138700 | chr4D | 80.995 | 221 | 28 | 8 | 2018 | 2236 | 493748995 | 493748787 | 3.120000e-36 | 163 |
21 | TraesCS6D01G138700 | chr5A | 85.119 | 168 | 14 | 6 | 2018 | 2185 | 576078073 | 576077917 | 1.120000e-35 | 161 |
22 | TraesCS6D01G138700 | chr5A | 83.478 | 115 | 13 | 5 | 138 | 247 | 25890712 | 25890599 | 6.890000e-18 | 102 |
23 | TraesCS6D01G138700 | chr1B | 84.713 | 157 | 24 | 0 | 2274 | 2430 | 667237987 | 667237831 | 1.450000e-34 | 158 |
24 | TraesCS6D01G138700 | chr1B | 94.792 | 96 | 5 | 0 | 2272 | 2367 | 225454794 | 225454889 | 2.430000e-32 | 150 |
25 | TraesCS6D01G138700 | chr2D | 82.209 | 163 | 28 | 1 | 1004 | 1166 | 41957812 | 41957973 | 5.250000e-29 | 139 |
26 | TraesCS6D01G138700 | chr2D | 87.619 | 105 | 9 | 2 | 147 | 248 | 260369986 | 260370089 | 6.850000e-23 | 119 |
27 | TraesCS6D01G138700 | chr5B | 88.000 | 100 | 8 | 3 | 157 | 253 | 537533244 | 537533146 | 8.860000e-22 | 115 |
28 | TraesCS6D01G138700 | chr3A | 86.667 | 105 | 9 | 4 | 155 | 256 | 426027597 | 426027495 | 1.150000e-20 | 111 |
29 | TraesCS6D01G138700 | chr3A | 86.667 | 105 | 9 | 4 | 155 | 256 | 426073868 | 426073766 | 1.150000e-20 | 111 |
30 | TraesCS6D01G138700 | chr2B | 87.129 | 101 | 9 | 3 | 155 | 252 | 257534762 | 257534861 | 1.150000e-20 | 111 |
31 | TraesCS6D01G138700 | chr2B | 85.437 | 103 | 11 | 3 | 157 | 256 | 601206847 | 601206948 | 1.920000e-18 | 104 |
32 | TraesCS6D01G138700 | chr1D | 88.421 | 95 | 8 | 1 | 157 | 248 | 3952654 | 3952560 | 1.150000e-20 | 111 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6D01G138700 | chr6D | 107795236 | 107799135 | 3899 | False | 7203.00 | 7203 | 100.000 | 1 | 3900 | 1 | chr6D.!!$F1 | 3899 |
1 | TraesCS6D01G138700 | chr6A | 131442582 | 131446259 | 3677 | False | 1183.75 | 4198 | 91.868 | 249 | 3900 | 4 | chr6A.!!$F2 | 3651 |
2 | TraesCS6D01G138700 | chr6B | 195125926 | 195128830 | 2904 | False | 3989.00 | 3989 | 91.655 | 215 | 3106 | 1 | chr6B.!!$F1 | 2891 |
3 | TraesCS6D01G138700 | chr4A | 123928282 | 123929593 | 1311 | False | 1703.00 | 1703 | 90.015 | 1259 | 2595 | 1 | chr4A.!!$F1 | 1336 |
4 | TraesCS6D01G138700 | chr4A | 344517073 | 344517746 | 673 | False | 800.00 | 800 | 88.133 | 1910 | 2594 | 1 | chr4A.!!$F3 | 684 |
5 | TraesCS6D01G138700 | chr4A | 344508208 | 344508825 | 617 | False | 399.50 | 464 | 90.183 | 1259 | 1914 | 2 | chr4A.!!$F4 | 655 |
6 | TraesCS6D01G138700 | chr7A | 39248666 | 39249524 | 858 | False | 1181.00 | 1181 | 91.419 | 1726 | 2595 | 1 | chr7A.!!$F1 | 869 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
112 | 113 | 0.030638 | GGCACAAACACGCATGAGTT | 59.969 | 50.0 | 0.00 | 0.0 | 0.00 | 3.01 | F |
1166 | 1213 | 0.325272 | AAGGAGGAAAAGAGGGCGAC | 59.675 | 55.0 | 0.00 | 0.0 | 0.00 | 5.19 | F |
2009 | 2091 | 0.247736 | AATCTCCGTCAGTGACCTGC | 59.752 | 55.0 | 17.57 | 0.0 | 38.66 | 4.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1526 | 1603 | 0.606401 | TCTTGAAGCCCTGAAAGCGG | 60.606 | 55.0 | 0.00 | 0.0 | 34.64 | 5.52 | R |
2268 | 2354 | 0.178992 | CCTTTGGAAGCCCACTGACA | 60.179 | 55.0 | 0.00 | 0.0 | 43.41 | 3.58 | R |
3777 | 4002 | 0.601558 | GACTGTTCGGAGTGGCTACA | 59.398 | 55.0 | 2.02 | 0.0 | 0.00 | 2.74 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
27 | 28 | 8.868916 | TGTTTTTGTAAAGAAATCAAACTCAGC | 58.131 | 29.630 | 0.00 | 0.00 | 32.08 | 4.26 |
28 | 29 | 8.328146 | GTTTTTGTAAAGAAATCAAACTCAGCC | 58.672 | 33.333 | 0.00 | 0.00 | 32.08 | 4.85 |
29 | 30 | 6.959639 | TTGTAAAGAAATCAAACTCAGCCT | 57.040 | 33.333 | 0.00 | 0.00 | 0.00 | 4.58 |
30 | 31 | 6.959639 | TGTAAAGAAATCAAACTCAGCCTT | 57.040 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
31 | 32 | 6.970484 | TGTAAAGAAATCAAACTCAGCCTTC | 58.030 | 36.000 | 0.00 | 0.00 | 0.00 | 3.46 |
32 | 33 | 4.756084 | AAGAAATCAAACTCAGCCTTCG | 57.244 | 40.909 | 0.00 | 0.00 | 0.00 | 3.79 |
33 | 34 | 3.744660 | AGAAATCAAACTCAGCCTTCGT | 58.255 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
34 | 35 | 3.748568 | AGAAATCAAACTCAGCCTTCGTC | 59.251 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
35 | 36 | 2.100605 | ATCAAACTCAGCCTTCGTCC | 57.899 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
36 | 37 | 0.034896 | TCAAACTCAGCCTTCGTCCC | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
37 | 38 | 0.250295 | CAAACTCAGCCTTCGTCCCA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
38 | 39 | 0.472471 | AAACTCAGCCTTCGTCCCAA | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
39 | 40 | 0.035458 | AACTCAGCCTTCGTCCCAAG | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
40 | 41 | 1.122019 | ACTCAGCCTTCGTCCCAAGT | 61.122 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
41 | 42 | 0.895530 | CTCAGCCTTCGTCCCAAGTA | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
42 | 43 | 1.482593 | CTCAGCCTTCGTCCCAAGTAT | 59.517 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
43 | 44 | 2.693591 | CTCAGCCTTCGTCCCAAGTATA | 59.306 | 50.000 | 0.00 | 0.00 | 0.00 | 1.47 |
44 | 45 | 3.305720 | TCAGCCTTCGTCCCAAGTATAT | 58.694 | 45.455 | 0.00 | 0.00 | 0.00 | 0.86 |
45 | 46 | 3.069586 | TCAGCCTTCGTCCCAAGTATATG | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
46 | 47 | 3.039011 | AGCCTTCGTCCCAAGTATATGT | 58.961 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
47 | 48 | 3.069729 | AGCCTTCGTCCCAAGTATATGTC | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
48 | 49 | 3.069729 | GCCTTCGTCCCAAGTATATGTCT | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
49 | 50 | 4.796618 | GCCTTCGTCCCAAGTATATGTCTC | 60.797 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
50 | 51 | 4.262079 | CCTTCGTCCCAAGTATATGTCTCC | 60.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
51 | 52 | 4.180377 | TCGTCCCAAGTATATGTCTCCT | 57.820 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
52 | 53 | 4.142790 | TCGTCCCAAGTATATGTCTCCTC | 58.857 | 47.826 | 0.00 | 0.00 | 0.00 | 3.71 |
53 | 54 | 3.256136 | CGTCCCAAGTATATGTCTCCTCC | 59.744 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
54 | 55 | 4.484912 | GTCCCAAGTATATGTCTCCTCCT | 58.515 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
55 | 56 | 4.282195 | GTCCCAAGTATATGTCTCCTCCTG | 59.718 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
56 | 57 | 4.078571 | TCCCAAGTATATGTCTCCTCCTGT | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 4.00 |
57 | 58 | 5.135533 | TCCCAAGTATATGTCTCCTCCTGTA | 59.864 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
58 | 59 | 5.839063 | CCCAAGTATATGTCTCCTCCTGTAA | 59.161 | 44.000 | 0.00 | 0.00 | 0.00 | 2.41 |
59 | 60 | 6.326583 | CCCAAGTATATGTCTCCTCCTGTAAA | 59.673 | 42.308 | 0.00 | 0.00 | 0.00 | 2.01 |
60 | 61 | 7.210873 | CCAAGTATATGTCTCCTCCTGTAAAC | 58.789 | 42.308 | 0.00 | 0.00 | 0.00 | 2.01 |
61 | 62 | 6.636562 | AGTATATGTCTCCTCCTGTAAACG | 57.363 | 41.667 | 0.00 | 0.00 | 0.00 | 3.60 |
62 | 63 | 6.127793 | AGTATATGTCTCCTCCTGTAAACGT | 58.872 | 40.000 | 0.00 | 0.00 | 0.00 | 3.99 |
63 | 64 | 7.285566 | AGTATATGTCTCCTCCTGTAAACGTA | 58.714 | 38.462 | 0.00 | 0.00 | 0.00 | 3.57 |
64 | 65 | 4.985538 | ATGTCTCCTCCTGTAAACGTAG | 57.014 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
65 | 66 | 3.087031 | TGTCTCCTCCTGTAAACGTAGG | 58.913 | 50.000 | 0.00 | 0.00 | 35.34 | 3.18 |
66 | 67 | 3.245016 | TGTCTCCTCCTGTAAACGTAGGA | 60.245 | 47.826 | 4.75 | 4.75 | 40.68 | 2.94 |
67 | 68 | 3.128415 | GTCTCCTCCTGTAAACGTAGGAC | 59.872 | 52.174 | 0.45 | 0.00 | 38.15 | 3.85 |
68 | 69 | 3.087031 | CTCCTCCTGTAAACGTAGGACA | 58.913 | 50.000 | 0.45 | 0.00 | 38.15 | 4.02 |
69 | 70 | 2.821969 | TCCTCCTGTAAACGTAGGACAC | 59.178 | 50.000 | 0.45 | 0.00 | 38.15 | 3.67 |
70 | 71 | 2.094338 | CCTCCTGTAAACGTAGGACACC | 60.094 | 54.545 | 0.45 | 0.00 | 38.15 | 4.16 |
71 | 72 | 1.541147 | TCCTGTAAACGTAGGACACCG | 59.459 | 52.381 | 0.45 | 0.00 | 38.15 | 4.94 |
72 | 73 | 1.403249 | CCTGTAAACGTAGGACACCGG | 60.403 | 57.143 | 0.00 | 0.00 | 36.11 | 5.28 |
73 | 74 | 1.270550 | CTGTAAACGTAGGACACCGGT | 59.729 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
74 | 75 | 1.686052 | TGTAAACGTAGGACACCGGTT | 59.314 | 47.619 | 2.97 | 0.00 | 37.76 | 4.44 |
75 | 76 | 2.061028 | GTAAACGTAGGACACCGGTTG | 58.939 | 52.381 | 2.97 | 2.94 | 34.41 | 3.77 |
76 | 77 | 0.465287 | AAACGTAGGACACCGGTTGT | 59.535 | 50.000 | 2.97 | 6.91 | 43.10 | 3.32 |
88 | 89 | 4.572571 | GGTTGTCACCGGCCACCA | 62.573 | 66.667 | 0.00 | 0.00 | 31.60 | 4.17 |
89 | 90 | 3.284449 | GTTGTCACCGGCCACCAC | 61.284 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
90 | 91 | 3.484806 | TTGTCACCGGCCACCACT | 61.485 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
91 | 92 | 3.765894 | TTGTCACCGGCCACCACTG | 62.766 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
92 | 93 | 3.936203 | GTCACCGGCCACCACTGA | 61.936 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
93 | 94 | 3.625897 | TCACCGGCCACCACTGAG | 61.626 | 66.667 | 0.00 | 0.00 | 0.00 | 3.35 |
94 | 95 | 4.704833 | CACCGGCCACCACTGAGG | 62.705 | 72.222 | 0.00 | 0.00 | 45.67 | 3.86 |
100 | 101 | 4.577152 | CCACCACTGAGGCACAAA | 57.423 | 55.556 | 0.00 | 0.00 | 43.14 | 2.83 |
101 | 102 | 2.032981 | CCACCACTGAGGCACAAAC | 58.967 | 57.895 | 0.00 | 0.00 | 43.14 | 2.93 |
102 | 103 | 0.751277 | CCACCACTGAGGCACAAACA | 60.751 | 55.000 | 0.00 | 0.00 | 43.14 | 2.83 |
103 | 104 | 0.381801 | CACCACTGAGGCACAAACAC | 59.618 | 55.000 | 0.00 | 0.00 | 43.14 | 3.32 |
104 | 105 | 1.095228 | ACCACTGAGGCACAAACACG | 61.095 | 55.000 | 0.00 | 0.00 | 43.14 | 4.49 |
105 | 106 | 1.009675 | CACTGAGGCACAAACACGC | 60.010 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
106 | 107 | 1.451207 | ACTGAGGCACAAACACGCA | 60.451 | 52.632 | 0.00 | 0.00 | 0.00 | 5.24 |
107 | 108 | 0.819259 | ACTGAGGCACAAACACGCAT | 60.819 | 50.000 | 0.00 | 0.00 | 0.00 | 4.73 |
108 | 109 | 0.386352 | CTGAGGCACAAACACGCATG | 60.386 | 55.000 | 0.00 | 0.00 | 0.00 | 4.06 |
109 | 110 | 0.817229 | TGAGGCACAAACACGCATGA | 60.817 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
110 | 111 | 0.110056 | GAGGCACAAACACGCATGAG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
111 | 112 | 0.819259 | AGGCACAAACACGCATGAGT | 60.819 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
112 | 113 | 0.030638 | GGCACAAACACGCATGAGTT | 59.969 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
113 | 114 | 1.122849 | GCACAAACACGCATGAGTTG | 58.877 | 50.000 | 0.00 | 0.00 | 33.38 | 3.16 |
114 | 115 | 1.757574 | CACAAACACGCATGAGTTGG | 58.242 | 50.000 | 0.00 | 0.00 | 32.22 | 3.77 |
115 | 116 | 0.667993 | ACAAACACGCATGAGTTGGG | 59.332 | 50.000 | 0.00 | 0.00 | 43.63 | 4.12 |
116 | 117 | 0.664166 | CAAACACGCATGAGTTGGGC | 60.664 | 55.000 | 0.00 | 0.00 | 41.83 | 5.36 |
117 | 118 | 1.106351 | AAACACGCATGAGTTGGGCA | 61.106 | 50.000 | 0.00 | 0.00 | 41.83 | 5.36 |
118 | 119 | 0.895100 | AACACGCATGAGTTGGGCAT | 60.895 | 50.000 | 0.00 | 0.00 | 41.83 | 4.40 |
119 | 120 | 1.138036 | CACGCATGAGTTGGGCATG | 59.862 | 57.895 | 0.00 | 0.00 | 44.52 | 4.06 |
120 | 121 | 2.048023 | ACGCATGAGTTGGGCATGG | 61.048 | 57.895 | 0.00 | 0.00 | 42.53 | 3.66 |
121 | 122 | 2.048023 | CGCATGAGTTGGGCATGGT | 61.048 | 57.895 | 0.00 | 0.00 | 42.53 | 3.55 |
122 | 123 | 0.747644 | CGCATGAGTTGGGCATGGTA | 60.748 | 55.000 | 0.00 | 0.00 | 42.53 | 3.25 |
123 | 124 | 1.473258 | GCATGAGTTGGGCATGGTAA | 58.527 | 50.000 | 0.00 | 0.00 | 42.53 | 2.85 |
124 | 125 | 2.034124 | GCATGAGTTGGGCATGGTAAT | 58.966 | 47.619 | 0.00 | 0.00 | 42.53 | 1.89 |
125 | 126 | 3.221771 | GCATGAGTTGGGCATGGTAATA | 58.778 | 45.455 | 0.00 | 0.00 | 42.53 | 0.98 |
126 | 127 | 3.828451 | GCATGAGTTGGGCATGGTAATAT | 59.172 | 43.478 | 0.00 | 0.00 | 42.53 | 1.28 |
127 | 128 | 4.281688 | GCATGAGTTGGGCATGGTAATATT | 59.718 | 41.667 | 0.00 | 0.00 | 42.53 | 1.28 |
128 | 129 | 5.775686 | CATGAGTTGGGCATGGTAATATTG | 58.224 | 41.667 | 0.00 | 0.00 | 39.48 | 1.90 |
129 | 130 | 5.122707 | TGAGTTGGGCATGGTAATATTGA | 57.877 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
130 | 131 | 5.514169 | TGAGTTGGGCATGGTAATATTGAA | 58.486 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
131 | 132 | 5.593909 | TGAGTTGGGCATGGTAATATTGAAG | 59.406 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
132 | 133 | 5.518865 | AGTTGGGCATGGTAATATTGAAGT | 58.481 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
133 | 134 | 5.957774 | AGTTGGGCATGGTAATATTGAAGTT | 59.042 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
134 | 135 | 6.096846 | AGTTGGGCATGGTAATATTGAAGTTC | 59.903 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
135 | 136 | 4.578516 | TGGGCATGGTAATATTGAAGTTCG | 59.421 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
136 | 137 | 4.819630 | GGGCATGGTAATATTGAAGTTCGA | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
137 | 138 | 5.298276 | GGGCATGGTAATATTGAAGTTCGAA | 59.702 | 40.000 | 0.00 | 0.00 | 0.00 | 3.71 |
138 | 139 | 6.199393 | GGCATGGTAATATTGAAGTTCGAAC | 58.801 | 40.000 | 20.71 | 20.71 | 0.00 | 3.95 |
139 | 140 | 6.183360 | GGCATGGTAATATTGAAGTTCGAACA | 60.183 | 38.462 | 28.78 | 9.75 | 0.00 | 3.18 |
140 | 141 | 7.247728 | GCATGGTAATATTGAAGTTCGAACAA | 58.752 | 34.615 | 28.78 | 15.63 | 0.00 | 2.83 |
141 | 142 | 7.753132 | GCATGGTAATATTGAAGTTCGAACAAA | 59.247 | 33.333 | 28.78 | 19.47 | 0.00 | 2.83 |
142 | 143 | 9.061610 | CATGGTAATATTGAAGTTCGAACAAAC | 57.938 | 33.333 | 28.78 | 18.71 | 0.00 | 2.93 |
143 | 144 | 7.292292 | TGGTAATATTGAAGTTCGAACAAACG | 58.708 | 34.615 | 28.78 | 0.00 | 34.27 | 3.60 |
144 | 145 | 7.171167 | TGGTAATATTGAAGTTCGAACAAACGA | 59.829 | 33.333 | 28.78 | 18.27 | 40.55 | 3.85 |
164 | 165 | 6.821031 | ACGAAAGTACACATCTACTCTCTT | 57.179 | 37.500 | 0.00 | 0.00 | 46.88 | 2.85 |
165 | 166 | 6.844254 | ACGAAAGTACACATCTACTCTCTTC | 58.156 | 40.000 | 0.00 | 0.00 | 46.88 | 2.87 |
166 | 167 | 5.960683 | CGAAAGTACACATCTACTCTCTTCG | 59.039 | 44.000 | 0.00 | 0.00 | 32.44 | 3.79 |
167 | 168 | 6.402334 | CGAAAGTACACATCTACTCTCTTCGT | 60.402 | 42.308 | 0.00 | 0.00 | 33.62 | 3.85 |
168 | 169 | 6.425577 | AAGTACACATCTACTCTCTTCGTC | 57.574 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
169 | 170 | 5.736813 | AGTACACATCTACTCTCTTCGTCT | 58.263 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
170 | 171 | 5.813672 | AGTACACATCTACTCTCTTCGTCTC | 59.186 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
171 | 172 | 4.580868 | ACACATCTACTCTCTTCGTCTCA | 58.419 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
172 | 173 | 5.004448 | ACACATCTACTCTCTTCGTCTCAA | 58.996 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
173 | 174 | 5.473846 | ACACATCTACTCTCTTCGTCTCAAA | 59.526 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
174 | 175 | 6.027131 | CACATCTACTCTCTTCGTCTCAAAG | 58.973 | 44.000 | 0.00 | 0.00 | 0.00 | 2.77 |
175 | 176 | 5.708230 | ACATCTACTCTCTTCGTCTCAAAGT | 59.292 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
176 | 177 | 6.879993 | ACATCTACTCTCTTCGTCTCAAAGTA | 59.120 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
177 | 178 | 7.390996 | ACATCTACTCTCTTCGTCTCAAAGTAA | 59.609 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
178 | 179 | 7.367159 | TCTACTCTCTTCGTCTCAAAGTAAG | 57.633 | 40.000 | 0.00 | 0.00 | 0.00 | 2.34 |
179 | 180 | 6.935771 | TCTACTCTCTTCGTCTCAAAGTAAGT | 59.064 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
180 | 181 | 6.394025 | ACTCTCTTCGTCTCAAAGTAAGTT | 57.606 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
181 | 182 | 6.807789 | ACTCTCTTCGTCTCAAAGTAAGTTT | 58.192 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
182 | 183 | 6.919115 | ACTCTCTTCGTCTCAAAGTAAGTTTC | 59.081 | 38.462 | 0.00 | 0.00 | 0.00 | 2.78 |
183 | 184 | 7.040473 | TCTCTTCGTCTCAAAGTAAGTTTCT | 57.960 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
184 | 185 | 7.140048 | TCTCTTCGTCTCAAAGTAAGTTTCTC | 58.860 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
185 | 186 | 6.802608 | TCTTCGTCTCAAAGTAAGTTTCTCA | 58.197 | 36.000 | 0.00 | 0.00 | 0.00 | 3.27 |
186 | 187 | 7.262772 | TCTTCGTCTCAAAGTAAGTTTCTCAA | 58.737 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
187 | 188 | 7.435488 | TCTTCGTCTCAAAGTAAGTTTCTCAAG | 59.565 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
188 | 189 | 6.570692 | TCGTCTCAAAGTAAGTTTCTCAAGT | 58.429 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
189 | 190 | 7.039882 | TCGTCTCAAAGTAAGTTTCTCAAGTT | 58.960 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
190 | 191 | 7.548075 | TCGTCTCAAAGTAAGTTTCTCAAGTTT | 59.452 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
191 | 192 | 7.636359 | CGTCTCAAAGTAAGTTTCTCAAGTTTG | 59.364 | 37.037 | 0.00 | 0.00 | 34.86 | 2.93 |
192 | 193 | 8.451748 | GTCTCAAAGTAAGTTTCTCAAGTTTGT | 58.548 | 33.333 | 0.00 | 0.00 | 35.03 | 2.83 |
193 | 194 | 9.661563 | TCTCAAAGTAAGTTTCTCAAGTTTGTA | 57.338 | 29.630 | 0.00 | 0.00 | 35.03 | 2.41 |
194 | 195 | 9.704098 | CTCAAAGTAAGTTTCTCAAGTTTGTAC | 57.296 | 33.333 | 0.00 | 0.00 | 35.03 | 2.90 |
195 | 196 | 9.444600 | TCAAAGTAAGTTTCTCAAGTTTGTACT | 57.555 | 29.630 | 0.00 | 0.00 | 35.03 | 2.73 |
237 | 238 | 8.316640 | ACTAAGCTTGAGACACTTATTTTGAG | 57.683 | 34.615 | 9.86 | 0.00 | 0.00 | 3.02 |
239 | 240 | 7.992754 | AAGCTTGAGACACTTATTTTGAGAT | 57.007 | 32.000 | 0.00 | 0.00 | 0.00 | 2.75 |
247 | 248 | 5.749462 | ACACTTATTTTGAGATGGAGGGAG | 58.251 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
271 | 273 | 3.971245 | TGTTTGAACTTTGGCCTTTGT | 57.029 | 38.095 | 3.32 | 0.00 | 0.00 | 2.83 |
304 | 306 | 8.683550 | AAAAGTTTCAAACAAGTTGCTAGTAC | 57.316 | 30.769 | 2.41 | 0.00 | 37.13 | 2.73 |
305 | 307 | 7.625828 | AAGTTTCAAACAAGTTGCTAGTACT | 57.374 | 32.000 | 2.41 | 0.00 | 37.13 | 2.73 |
306 | 308 | 8.726870 | AAGTTTCAAACAAGTTGCTAGTACTA | 57.273 | 30.769 | 2.41 | 1.89 | 37.13 | 1.82 |
315 | 317 | 8.804912 | ACAAGTTGCTAGTACTAGTACTACAT | 57.195 | 34.615 | 30.50 | 18.12 | 43.98 | 2.29 |
495 | 504 | 1.129209 | GAAGCGTCAACGTTACGGC | 59.871 | 57.895 | 22.50 | 16.29 | 40.64 | 5.68 |
518 | 527 | 1.405256 | CGCTTGCTCTTCATCTGTCCT | 60.405 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
562 | 574 | 5.390461 | CGACGCTTCATTTATTTCCACTGAA | 60.390 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
564 | 576 | 5.240623 | ACGCTTCATTTATTTCCACTGAACA | 59.759 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
573 | 585 | 2.910688 | TCCACTGAACACTTCCTGTC | 57.089 | 50.000 | 0.00 | 0.00 | 30.29 | 3.51 |
579 | 591 | 1.694150 | TGAACACTTCCTGTCTCCTGG | 59.306 | 52.381 | 0.00 | 0.00 | 30.29 | 4.45 |
646 | 662 | 2.625314 | GCAGCTCATTTAAATCCCCCTC | 59.375 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
699 | 715 | 0.541392 | AACGCCATAGTCCATGCTCA | 59.459 | 50.000 | 0.00 | 0.00 | 32.84 | 4.26 |
755 | 782 | 2.316108 | GGGGAAGTCCAAGAGCAAAAA | 58.684 | 47.619 | 0.00 | 0.00 | 37.91 | 1.94 |
888 | 929 | 0.823356 | CTCCAAACCACCACCCACAG | 60.823 | 60.000 | 0.00 | 0.00 | 0.00 | 3.66 |
945 | 986 | 2.763248 | CACTAACACGCACGCGAG | 59.237 | 61.111 | 19.66 | 13.19 | 42.83 | 5.03 |
978 | 1019 | 4.585216 | AACCCCCGTCCACCTCCA | 62.585 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
1166 | 1213 | 0.325272 | AAGGAGGAAAAGAGGGCGAC | 59.675 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1167 | 1214 | 1.448013 | GGAGGAAAAGAGGGCGACG | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 5.12 |
1168 | 1215 | 1.448013 | GAGGAAAAGAGGGCGACGG | 60.448 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
1458 | 1535 | 2.286523 | CGTCAGGGAGAAGGCCACT | 61.287 | 63.158 | 5.01 | 3.29 | 0.00 | 4.00 |
1461 | 1538 | 2.208349 | AGGGAGAAGGCCACTGGT | 59.792 | 61.111 | 5.01 | 0.00 | 0.00 | 4.00 |
1512 | 1589 | 0.463833 | CCAACGTGAGCTAATCCCCC | 60.464 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1526 | 1603 | 2.764547 | CCCCCGTCCTTCCTCCTC | 60.765 | 72.222 | 0.00 | 0.00 | 0.00 | 3.71 |
1534 | 1611 | 0.544357 | TCCTTCCTCCTCCGCTTTCA | 60.544 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1544 | 1621 | 0.606401 | TCCGCTTTCAGGGCTTCAAG | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1545 | 1622 | 0.606401 | CCGCTTTCAGGGCTTCAAGA | 60.606 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1567 | 1644 | 3.439857 | TTCAAAATCCAGGGGAGAGTG | 57.560 | 47.619 | 0.00 | 0.00 | 34.05 | 3.51 |
1578 | 1655 | 1.134371 | GGGGAGAGTGGTGTGATTAGC | 60.134 | 57.143 | 0.00 | 0.00 | 0.00 | 3.09 |
1607 | 1688 | 5.118990 | AGATTGGTGTCATAAGGATTCGTG | 58.881 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
1608 | 1689 | 2.627945 | TGGTGTCATAAGGATTCGTGC | 58.372 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
1609 | 1690 | 1.593006 | GGTGTCATAAGGATTCGTGCG | 59.407 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
1610 | 1691 | 2.268298 | GTGTCATAAGGATTCGTGCGT | 58.732 | 47.619 | 0.00 | 0.00 | 0.00 | 5.24 |
1843 | 1924 | 2.000447 | CGTTCCCCTTCGTGATTCTTC | 59.000 | 52.381 | 0.00 | 0.00 | 0.00 | 2.87 |
1882 | 1964 | 3.361786 | TCGAGACTGATTACCATGGTGA | 58.638 | 45.455 | 28.17 | 20.56 | 0.00 | 4.02 |
2009 | 2091 | 0.247736 | AATCTCCGTCAGTGACCTGC | 59.752 | 55.000 | 17.57 | 0.00 | 38.66 | 4.85 |
2306 | 2394 | 1.561542 | GGATTGGCAGGAGAAGAGGAA | 59.438 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
2316 | 2404 | 2.564947 | GGAGAAGAGGAACAGAGCTGAA | 59.435 | 50.000 | 4.21 | 0.00 | 0.00 | 3.02 |
2429 | 2517 | 5.303078 | TGGGAGTTAAGCTGAGAGATGTATC | 59.697 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2430 | 2518 | 5.279256 | GGGAGTTAAGCTGAGAGATGTATCC | 60.279 | 48.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2431 | 2519 | 5.538433 | GGAGTTAAGCTGAGAGATGTATCCT | 59.462 | 44.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2432 | 2520 | 6.294508 | GGAGTTAAGCTGAGAGATGTATCCTC | 60.295 | 46.154 | 0.00 | 0.00 | 0.00 | 3.71 |
2436 | 2525 | 3.321682 | AGCTGAGAGATGTATCCTCTTGC | 59.678 | 47.826 | 0.00 | 0.00 | 40.78 | 4.01 |
2453 | 2542 | 5.582665 | CCTCTTGCTCATCAGTACCTAAAAC | 59.417 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2565 | 2658 | 4.274459 | GTGCAGACATCAGTGAAGAACTTT | 59.726 | 41.667 | 1.66 | 0.00 | 36.83 | 2.66 |
2597 | 2690 | 4.380843 | TGGAGGTAAAATTTCTGCTCCA | 57.619 | 40.909 | 0.00 | 0.00 | 37.40 | 3.86 |
2604 | 2697 | 4.942761 | AAAATTTCTGCTCCAGCTTTCA | 57.057 | 36.364 | 0.00 | 0.00 | 42.66 | 2.69 |
2664 | 2769 | 1.134521 | ACAACTTGTGCTCGACAGGAA | 60.135 | 47.619 | 0.00 | 0.00 | 35.23 | 3.36 |
2691 | 2796 | 1.023513 | GGCAGACGATCTTGCAGCTT | 61.024 | 55.000 | 13.42 | 0.00 | 0.00 | 3.74 |
2735 | 2840 | 8.840321 | CAAGTACATAATGGATTTCAGGTAAGG | 58.160 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
2746 | 2851 | 4.422073 | TTCAGGTAAGGCATCGATCATT | 57.578 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
2747 | 2852 | 4.422073 | TCAGGTAAGGCATCGATCATTT | 57.578 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
2839 | 2951 | 1.204146 | GCAGATACCCCTTGACTGGA | 58.796 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
2884 | 2996 | 0.108615 | CGTCGATGGACTCCAAGCTT | 60.109 | 55.000 | 0.66 | 0.00 | 41.16 | 3.74 |
2925 | 3039 | 1.432514 | TGCAGATGCGACAGAGTTTC | 58.567 | 50.000 | 0.00 | 0.00 | 45.83 | 2.78 |
2936 | 3050 | 1.076332 | CAGAGTTTCGTTTAGCCCGG | 58.924 | 55.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3072 | 3186 | 1.629043 | TGTTCGTCTGCTTACCCTCT | 58.371 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3137 | 3251 | 1.079336 | GTGGTACTCCCTGCGTTCC | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 3.62 |
3144 | 3258 | 3.149005 | ACTCCCTGCGTTCCAAAATAA | 57.851 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
3145 | 3259 | 3.492337 | ACTCCCTGCGTTCCAAAATAAA | 58.508 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
3146 | 3260 | 3.892588 | ACTCCCTGCGTTCCAAAATAAAA | 59.107 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
3184 | 3298 | 4.771590 | TTTTGATGAACTGATGGACTGC | 57.228 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
3222 | 3336 | 3.790437 | CCCGAGCTGGTCATGCCT | 61.790 | 66.667 | 7.70 | 0.00 | 38.35 | 4.75 |
3228 | 3342 | 2.998279 | GCTGGTCATGCCTGGCAAC | 61.998 | 63.158 | 27.24 | 19.76 | 43.62 | 4.17 |
3231 | 3345 | 2.562912 | GTCATGCCTGGCAACGTG | 59.437 | 61.111 | 27.24 | 19.45 | 43.62 | 4.49 |
3234 | 3348 | 3.367743 | ATGCCTGGCAACGTGCTG | 61.368 | 61.111 | 27.24 | 0.00 | 43.62 | 4.41 |
3267 | 3381 | 3.206150 | CAGTTACTGTCACTGCCAAAGT | 58.794 | 45.455 | 9.00 | 0.00 | 40.93 | 2.66 |
3279 | 3393 | 0.244721 | GCCAAAGTGCCAAGGATGAC | 59.755 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3285 | 3399 | 0.532573 | GTGCCAAGGATGACGAGAGA | 59.467 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3294 | 3408 | 4.863925 | GACGAGAGAGGCGCCAGC | 62.864 | 72.222 | 31.54 | 20.49 | 44.18 | 4.85 |
3307 | 3421 | 0.465705 | CGCCAGCCAGGAGAGATTTA | 59.534 | 55.000 | 0.00 | 0.00 | 40.01 | 1.40 |
3324 | 3438 | 0.324091 | TTAGAGGGGAGTGGTCGGAC | 60.324 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3389 | 3503 | 1.645034 | GCTAAGCAGCGAGAATGACA | 58.355 | 50.000 | 1.72 | 0.00 | 38.22 | 3.58 |
3390 | 3504 | 2.002586 | GCTAAGCAGCGAGAATGACAA | 58.997 | 47.619 | 1.72 | 0.00 | 38.22 | 3.18 |
3396 | 3510 | 2.417379 | GCAGCGAGAATGACAAGTAGGA | 60.417 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
3397 | 3511 | 3.443037 | CAGCGAGAATGACAAGTAGGAG | 58.557 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3399 | 3513 | 4.096532 | CAGCGAGAATGACAAGTAGGAGTA | 59.903 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
3401 | 3515 | 4.979197 | GCGAGAATGACAAGTAGGAGTATG | 59.021 | 45.833 | 0.00 | 0.00 | 0.00 | 2.39 |
3404 | 3518 | 6.693545 | CGAGAATGACAAGTAGGAGTATGTTC | 59.306 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
3409 | 3523 | 3.700038 | ACAAGTAGGAGTATGTTCCTCGG | 59.300 | 47.826 | 3.34 | 0.00 | 44.33 | 4.63 |
3411 | 3525 | 2.091775 | AGTAGGAGTATGTTCCTCGGCT | 60.092 | 50.000 | 3.34 | 0.07 | 44.33 | 5.52 |
3423 | 3586 | 1.151668 | CCTCGGCTGTTCTTTCACTG | 58.848 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3455 | 3618 | 1.075601 | AGGGCATTCAAGGAGAACCA | 58.924 | 50.000 | 0.00 | 0.00 | 39.49 | 3.67 |
3456 | 3619 | 1.642762 | AGGGCATTCAAGGAGAACCAT | 59.357 | 47.619 | 0.00 | 0.00 | 39.49 | 3.55 |
3460 | 3623 | 3.350833 | GCATTCAAGGAGAACCATCTGT | 58.649 | 45.455 | 0.00 | 0.00 | 39.49 | 3.41 |
3533 | 3696 | 4.798387 | GCAAAATTGGATGTCCGTATCAAC | 59.202 | 41.667 | 0.00 | 0.00 | 39.43 | 3.18 |
3534 | 3697 | 5.621104 | GCAAAATTGGATGTCCGTATCAACA | 60.621 | 40.000 | 0.00 | 0.00 | 39.43 | 3.33 |
3535 | 3698 | 6.563422 | CAAAATTGGATGTCCGTATCAACAT | 58.437 | 36.000 | 0.00 | 0.00 | 38.78 | 2.71 |
3536 | 3699 | 5.756195 | AATTGGATGTCCGTATCAACATG | 57.244 | 39.130 | 0.00 | 0.00 | 36.28 | 3.21 |
3537 | 3700 | 3.192541 | TGGATGTCCGTATCAACATGG | 57.807 | 47.619 | 0.00 | 0.00 | 36.28 | 3.66 |
3538 | 3701 | 2.503765 | TGGATGTCCGTATCAACATGGT | 59.496 | 45.455 | 0.00 | 0.00 | 36.28 | 3.55 |
3539 | 3702 | 3.131396 | GGATGTCCGTATCAACATGGTC | 58.869 | 50.000 | 0.00 | 0.00 | 36.28 | 4.02 |
3540 | 3703 | 3.431626 | GGATGTCCGTATCAACATGGTCA | 60.432 | 47.826 | 0.00 | 0.00 | 36.28 | 4.02 |
3541 | 3704 | 3.904800 | TGTCCGTATCAACATGGTCAT | 57.095 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
3542 | 3705 | 3.792401 | TGTCCGTATCAACATGGTCATC | 58.208 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
3543 | 3706 | 3.450817 | TGTCCGTATCAACATGGTCATCT | 59.549 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
3544 | 3707 | 4.051922 | GTCCGTATCAACATGGTCATCTC | 58.948 | 47.826 | 0.00 | 0.00 | 0.00 | 2.75 |
3545 | 3708 | 3.704061 | TCCGTATCAACATGGTCATCTCA | 59.296 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
3546 | 3709 | 4.161377 | TCCGTATCAACATGGTCATCTCAA | 59.839 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3547 | 3710 | 5.059161 | CCGTATCAACATGGTCATCTCAAT | 58.941 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3548 | 3711 | 5.049886 | CCGTATCAACATGGTCATCTCAATG | 60.050 | 44.000 | 0.00 | 0.00 | 0.00 | 2.82 |
3549 | 3712 | 5.525012 | CGTATCAACATGGTCATCTCAATGT | 59.475 | 40.000 | 0.00 | 0.00 | 34.32 | 2.71 |
3552 | 3715 | 6.741992 | TCAACATGGTCATCTCAATGTAAC | 57.258 | 37.500 | 0.00 | 0.00 | 34.32 | 2.50 |
3560 | 3723 | 5.585047 | GGTCATCTCAATGTAACCAGTAACC | 59.415 | 44.000 | 0.00 | 0.00 | 34.32 | 2.85 |
3576 | 3739 | 2.440247 | CCGGTTTGGGCCAGGATC | 60.440 | 66.667 | 6.23 | 0.00 | 0.00 | 3.36 |
3609 | 3772 | 9.343539 | GGATTTTCTTGTATAATCCAAGCTAGT | 57.656 | 33.333 | 0.00 | 0.00 | 44.30 | 2.57 |
3614 | 3777 | 8.250143 | TCTTGTATAATCCAAGCTAGTGATGA | 57.750 | 34.615 | 0.00 | 0.00 | 39.30 | 2.92 |
3737 | 3962 | 4.685169 | CCTAAAGGTGTTGTGCATACAG | 57.315 | 45.455 | 5.01 | 0.00 | 38.23 | 2.74 |
3738 | 3963 | 4.323417 | CCTAAAGGTGTTGTGCATACAGA | 58.677 | 43.478 | 5.01 | 0.00 | 38.23 | 3.41 |
3739 | 3964 | 4.943705 | CCTAAAGGTGTTGTGCATACAGAT | 59.056 | 41.667 | 5.01 | 0.00 | 38.23 | 2.90 |
3740 | 3965 | 6.112734 | CCTAAAGGTGTTGTGCATACAGATA | 58.887 | 40.000 | 5.01 | 0.00 | 38.23 | 1.98 |
3741 | 3966 | 6.597672 | CCTAAAGGTGTTGTGCATACAGATAA | 59.402 | 38.462 | 5.01 | 0.00 | 38.23 | 1.75 |
3742 | 3967 | 7.283127 | CCTAAAGGTGTTGTGCATACAGATAAT | 59.717 | 37.037 | 5.01 | 0.00 | 38.23 | 1.28 |
3743 | 3968 | 6.683974 | AAGGTGTTGTGCATACAGATAATC | 57.316 | 37.500 | 5.01 | 0.00 | 38.23 | 1.75 |
3744 | 3969 | 5.994250 | AGGTGTTGTGCATACAGATAATCT | 58.006 | 37.500 | 5.01 | 0.00 | 38.23 | 2.40 |
3756 | 3981 | 4.785669 | CAGATAATCTGTTCAACCGAGC | 57.214 | 45.455 | 0.00 | 0.00 | 39.58 | 5.03 |
3757 | 3982 | 4.183865 | CAGATAATCTGTTCAACCGAGCA | 58.816 | 43.478 | 0.00 | 0.00 | 39.58 | 4.26 |
3758 | 3983 | 4.813161 | CAGATAATCTGTTCAACCGAGCAT | 59.187 | 41.667 | 0.00 | 0.00 | 39.58 | 3.79 |
3759 | 3984 | 5.295292 | CAGATAATCTGTTCAACCGAGCATT | 59.705 | 40.000 | 0.00 | 0.00 | 39.58 | 3.56 |
3760 | 3985 | 6.479990 | CAGATAATCTGTTCAACCGAGCATTA | 59.520 | 38.462 | 0.00 | 0.00 | 39.58 | 1.90 |
3761 | 3986 | 6.703607 | AGATAATCTGTTCAACCGAGCATTAG | 59.296 | 38.462 | 0.00 | 0.00 | 31.35 | 1.73 |
3762 | 3987 | 2.346803 | TCTGTTCAACCGAGCATTAGC | 58.653 | 47.619 | 0.00 | 0.00 | 42.56 | 3.09 |
3776 | 4001 | 4.548991 | GCATTAGCTCCATCTCAACTTG | 57.451 | 45.455 | 0.00 | 0.00 | 37.91 | 3.16 |
3777 | 4002 | 3.944015 | GCATTAGCTCCATCTCAACTTGT | 59.056 | 43.478 | 0.00 | 0.00 | 37.91 | 3.16 |
3778 | 4003 | 4.201891 | GCATTAGCTCCATCTCAACTTGTG | 60.202 | 45.833 | 0.00 | 0.00 | 37.91 | 3.33 |
3788 | 4013 | 2.037251 | TCTCAACTTGTGTAGCCACTCC | 59.963 | 50.000 | 0.00 | 0.00 | 42.34 | 3.85 |
3789 | 4014 | 1.148310 | CAACTTGTGTAGCCACTCCG | 58.852 | 55.000 | 0.00 | 0.00 | 42.34 | 4.63 |
3850 | 4075 | 1.494721 | ACTGTCATGGTCCCACAAAGT | 59.505 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
3881 | 4106 | 5.415701 | GTCACCATCAACCAATGTGAACTAT | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
3884 | 4109 | 6.808212 | CACCATCAACCAATGTGAACTATTTC | 59.192 | 38.462 | 0.00 | 0.00 | 0.00 | 2.17 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
1 | 2 | 8.868916 | GCTGAGTTTGATTTCTTTACAAAAACA | 58.131 | 29.630 | 0.00 | 0.00 | 35.74 | 2.83 |
2 | 3 | 8.328146 | GGCTGAGTTTGATTTCTTTACAAAAAC | 58.672 | 33.333 | 0.00 | 0.00 | 35.74 | 2.43 |
3 | 4 | 8.257306 | AGGCTGAGTTTGATTTCTTTACAAAAA | 58.743 | 29.630 | 0.00 | 0.00 | 35.74 | 1.94 |
4 | 5 | 7.781056 | AGGCTGAGTTTGATTTCTTTACAAAA | 58.219 | 30.769 | 0.00 | 0.00 | 35.74 | 2.44 |
5 | 6 | 7.346751 | AGGCTGAGTTTGATTTCTTTACAAA | 57.653 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6 | 7 | 6.959639 | AGGCTGAGTTTGATTTCTTTACAA | 57.040 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
7 | 8 | 6.293407 | CGAAGGCTGAGTTTGATTTCTTTACA | 60.293 | 38.462 | 0.00 | 0.00 | 0.00 | 2.41 |
8 | 9 | 6.080406 | CGAAGGCTGAGTTTGATTTCTTTAC | 58.920 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
9 | 10 | 5.763204 | ACGAAGGCTGAGTTTGATTTCTTTA | 59.237 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
10 | 11 | 4.580580 | ACGAAGGCTGAGTTTGATTTCTTT | 59.419 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
11 | 12 | 4.137543 | ACGAAGGCTGAGTTTGATTTCTT | 58.862 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
12 | 13 | 3.744660 | ACGAAGGCTGAGTTTGATTTCT | 58.255 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
13 | 14 | 3.120165 | GGACGAAGGCTGAGTTTGATTTC | 60.120 | 47.826 | 0.00 | 0.00 | 0.00 | 2.17 |
14 | 15 | 2.814336 | GGACGAAGGCTGAGTTTGATTT | 59.186 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
15 | 16 | 2.427506 | GGACGAAGGCTGAGTTTGATT | 58.572 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
16 | 17 | 1.339151 | GGGACGAAGGCTGAGTTTGAT | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
17 | 18 | 0.034896 | GGGACGAAGGCTGAGTTTGA | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 2.69 |
18 | 19 | 0.250295 | TGGGACGAAGGCTGAGTTTG | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
19 | 20 | 0.472471 | TTGGGACGAAGGCTGAGTTT | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
20 | 21 | 0.035458 | CTTGGGACGAAGGCTGAGTT | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
21 | 22 | 1.122019 | ACTTGGGACGAAGGCTGAGT | 61.122 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
22 | 23 | 0.895530 | TACTTGGGACGAAGGCTGAG | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
23 | 24 | 1.568504 | ATACTTGGGACGAAGGCTGA | 58.431 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
24 | 25 | 3.181465 | ACATATACTTGGGACGAAGGCTG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
25 | 26 | 3.039011 | ACATATACTTGGGACGAAGGCT | 58.961 | 45.455 | 0.00 | 0.00 | 0.00 | 4.58 |
26 | 27 | 3.069729 | AGACATATACTTGGGACGAAGGC | 59.930 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
27 | 28 | 4.262079 | GGAGACATATACTTGGGACGAAGG | 60.262 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
28 | 29 | 4.585162 | AGGAGACATATACTTGGGACGAAG | 59.415 | 45.833 | 0.00 | 0.00 | 0.00 | 3.79 |
29 | 30 | 4.543689 | AGGAGACATATACTTGGGACGAA | 58.456 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
30 | 31 | 4.142790 | GAGGAGACATATACTTGGGACGA | 58.857 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
31 | 32 | 3.256136 | GGAGGAGACATATACTTGGGACG | 59.744 | 52.174 | 0.00 | 0.00 | 0.00 | 4.79 |
32 | 33 | 4.282195 | CAGGAGGAGACATATACTTGGGAC | 59.718 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
33 | 34 | 4.078571 | ACAGGAGGAGACATATACTTGGGA | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 4.37 |
34 | 35 | 4.227197 | ACAGGAGGAGACATATACTTGGG | 58.773 | 47.826 | 0.00 | 0.00 | 0.00 | 4.12 |
35 | 36 | 6.978674 | TTACAGGAGGAGACATATACTTGG | 57.021 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
36 | 37 | 6.918569 | CGTTTACAGGAGGAGACATATACTTG | 59.081 | 42.308 | 0.00 | 0.00 | 0.00 | 3.16 |
37 | 38 | 6.606395 | ACGTTTACAGGAGGAGACATATACTT | 59.394 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
38 | 39 | 6.127793 | ACGTTTACAGGAGGAGACATATACT | 58.872 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
39 | 40 | 6.388435 | ACGTTTACAGGAGGAGACATATAC | 57.612 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
40 | 41 | 6.713903 | CCTACGTTTACAGGAGGAGACATATA | 59.286 | 42.308 | 0.00 | 0.00 | 33.42 | 0.86 |
41 | 42 | 5.535406 | CCTACGTTTACAGGAGGAGACATAT | 59.465 | 44.000 | 0.00 | 0.00 | 33.42 | 1.78 |
42 | 43 | 4.885907 | CCTACGTTTACAGGAGGAGACATA | 59.114 | 45.833 | 0.00 | 0.00 | 33.42 | 2.29 |
43 | 44 | 3.700038 | CCTACGTTTACAGGAGGAGACAT | 59.300 | 47.826 | 0.00 | 0.00 | 33.42 | 3.06 |
44 | 45 | 3.087031 | CCTACGTTTACAGGAGGAGACA | 58.913 | 50.000 | 0.00 | 0.00 | 33.42 | 3.41 |
45 | 46 | 3.128415 | GTCCTACGTTTACAGGAGGAGAC | 59.872 | 52.174 | 5.01 | 0.00 | 41.63 | 3.36 |
46 | 47 | 3.245016 | TGTCCTACGTTTACAGGAGGAGA | 60.245 | 47.826 | 5.01 | 0.00 | 41.63 | 3.71 |
47 | 48 | 3.087031 | TGTCCTACGTTTACAGGAGGAG | 58.913 | 50.000 | 5.01 | 0.00 | 41.63 | 3.69 |
48 | 49 | 2.821969 | GTGTCCTACGTTTACAGGAGGA | 59.178 | 50.000 | 5.01 | 0.82 | 41.63 | 3.71 |
49 | 50 | 2.094338 | GGTGTCCTACGTTTACAGGAGG | 60.094 | 54.545 | 5.01 | 0.00 | 41.63 | 4.30 |
50 | 51 | 2.415090 | CGGTGTCCTACGTTTACAGGAG | 60.415 | 54.545 | 5.01 | 0.00 | 41.63 | 3.69 |
51 | 52 | 1.541147 | CGGTGTCCTACGTTTACAGGA | 59.459 | 52.381 | 0.45 | 0.45 | 38.66 | 3.86 |
52 | 53 | 1.403249 | CCGGTGTCCTACGTTTACAGG | 60.403 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
53 | 54 | 1.270550 | ACCGGTGTCCTACGTTTACAG | 59.729 | 52.381 | 6.12 | 0.00 | 0.00 | 2.74 |
54 | 55 | 1.327303 | ACCGGTGTCCTACGTTTACA | 58.673 | 50.000 | 6.12 | 0.00 | 0.00 | 2.41 |
55 | 56 | 2.061028 | CAACCGGTGTCCTACGTTTAC | 58.939 | 52.381 | 8.52 | 0.00 | 0.00 | 2.01 |
56 | 57 | 1.686052 | ACAACCGGTGTCCTACGTTTA | 59.314 | 47.619 | 8.52 | 0.00 | 34.38 | 2.01 |
57 | 58 | 0.465287 | ACAACCGGTGTCCTACGTTT | 59.535 | 50.000 | 8.52 | 0.00 | 34.38 | 3.60 |
58 | 59 | 2.126951 | ACAACCGGTGTCCTACGTT | 58.873 | 52.632 | 8.52 | 0.00 | 34.38 | 3.99 |
59 | 60 | 3.860681 | ACAACCGGTGTCCTACGT | 58.139 | 55.556 | 8.52 | 0.00 | 34.38 | 3.57 |
71 | 72 | 4.572571 | TGGTGGCCGGTGACAACC | 62.573 | 66.667 | 1.90 | 0.00 | 43.76 | 3.77 |
72 | 73 | 3.284449 | GTGGTGGCCGGTGACAAC | 61.284 | 66.667 | 1.90 | 3.41 | 0.00 | 3.32 |
73 | 74 | 3.484806 | AGTGGTGGCCGGTGACAA | 61.485 | 61.111 | 1.90 | 0.00 | 0.00 | 3.18 |
74 | 75 | 4.248842 | CAGTGGTGGCCGGTGACA | 62.249 | 66.667 | 1.90 | 0.00 | 0.00 | 3.58 |
75 | 76 | 3.883744 | CTCAGTGGTGGCCGGTGAC | 62.884 | 68.421 | 1.90 | 0.00 | 0.00 | 3.67 |
76 | 77 | 3.625897 | CTCAGTGGTGGCCGGTGA | 61.626 | 66.667 | 1.90 | 0.00 | 0.00 | 4.02 |
77 | 78 | 4.704833 | CCTCAGTGGTGGCCGGTG | 62.705 | 72.222 | 1.90 | 0.00 | 0.00 | 4.94 |
83 | 84 | 0.751277 | TGTTTGTGCCTCAGTGGTGG | 60.751 | 55.000 | 0.00 | 0.00 | 38.35 | 4.61 |
84 | 85 | 0.381801 | GTGTTTGTGCCTCAGTGGTG | 59.618 | 55.000 | 0.00 | 0.00 | 38.35 | 4.17 |
85 | 86 | 1.095228 | CGTGTTTGTGCCTCAGTGGT | 61.095 | 55.000 | 0.00 | 0.00 | 38.35 | 4.16 |
86 | 87 | 1.648720 | CGTGTTTGTGCCTCAGTGG | 59.351 | 57.895 | 0.00 | 0.00 | 39.35 | 4.00 |
87 | 88 | 1.009675 | GCGTGTTTGTGCCTCAGTG | 60.010 | 57.895 | 0.00 | 0.00 | 0.00 | 3.66 |
88 | 89 | 0.819259 | ATGCGTGTTTGTGCCTCAGT | 60.819 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
89 | 90 | 0.386352 | CATGCGTGTTTGTGCCTCAG | 60.386 | 55.000 | 0.00 | 0.00 | 0.00 | 3.35 |
90 | 91 | 0.817229 | TCATGCGTGTTTGTGCCTCA | 60.817 | 50.000 | 5.68 | 0.00 | 0.00 | 3.86 |
91 | 92 | 0.110056 | CTCATGCGTGTTTGTGCCTC | 60.110 | 55.000 | 5.68 | 0.00 | 0.00 | 4.70 |
92 | 93 | 0.819259 | ACTCATGCGTGTTTGTGCCT | 60.819 | 50.000 | 5.68 | 0.00 | 0.00 | 4.75 |
93 | 94 | 0.030638 | AACTCATGCGTGTTTGTGCC | 59.969 | 50.000 | 5.68 | 0.00 | 0.00 | 5.01 |
94 | 95 | 1.122849 | CAACTCATGCGTGTTTGTGC | 58.877 | 50.000 | 5.68 | 0.00 | 0.00 | 4.57 |
95 | 96 | 1.600164 | CCCAACTCATGCGTGTTTGTG | 60.600 | 52.381 | 16.64 | 6.67 | 0.00 | 3.33 |
96 | 97 | 0.667993 | CCCAACTCATGCGTGTTTGT | 59.332 | 50.000 | 16.64 | 8.47 | 0.00 | 2.83 |
97 | 98 | 0.664166 | GCCCAACTCATGCGTGTTTG | 60.664 | 55.000 | 5.68 | 10.35 | 0.00 | 2.93 |
98 | 99 | 1.106351 | TGCCCAACTCATGCGTGTTT | 61.106 | 50.000 | 5.68 | 0.00 | 0.00 | 2.83 |
99 | 100 | 0.895100 | ATGCCCAACTCATGCGTGTT | 60.895 | 50.000 | 5.68 | 0.00 | 0.00 | 3.32 |
100 | 101 | 1.303561 | ATGCCCAACTCATGCGTGT | 60.304 | 52.632 | 5.68 | 0.00 | 0.00 | 4.49 |
101 | 102 | 1.138036 | CATGCCCAACTCATGCGTG | 59.862 | 57.895 | 0.00 | 0.00 | 35.48 | 5.34 |
102 | 103 | 2.048023 | CCATGCCCAACTCATGCGT | 61.048 | 57.895 | 0.00 | 0.00 | 39.83 | 5.24 |
103 | 104 | 0.747644 | TACCATGCCCAACTCATGCG | 60.748 | 55.000 | 0.00 | 0.00 | 39.83 | 4.73 |
104 | 105 | 1.473258 | TTACCATGCCCAACTCATGC | 58.527 | 50.000 | 0.00 | 0.00 | 39.83 | 4.06 |
105 | 106 | 5.535783 | TCAATATTACCATGCCCAACTCATG | 59.464 | 40.000 | 0.00 | 0.00 | 40.60 | 3.07 |
106 | 107 | 5.704354 | TCAATATTACCATGCCCAACTCAT | 58.296 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
107 | 108 | 5.122707 | TCAATATTACCATGCCCAACTCA | 57.877 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
108 | 109 | 5.594317 | ACTTCAATATTACCATGCCCAACTC | 59.406 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
109 | 110 | 5.518865 | ACTTCAATATTACCATGCCCAACT | 58.481 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
110 | 111 | 5.852282 | ACTTCAATATTACCATGCCCAAC | 57.148 | 39.130 | 0.00 | 0.00 | 0.00 | 3.77 |
111 | 112 | 5.067153 | CGAACTTCAATATTACCATGCCCAA | 59.933 | 40.000 | 0.00 | 0.00 | 0.00 | 4.12 |
112 | 113 | 4.578516 | CGAACTTCAATATTACCATGCCCA | 59.421 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
113 | 114 | 4.819630 | TCGAACTTCAATATTACCATGCCC | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
114 | 115 | 6.183360 | TGTTCGAACTTCAATATTACCATGCC | 60.183 | 38.462 | 27.32 | 0.00 | 0.00 | 4.40 |
115 | 116 | 6.781138 | TGTTCGAACTTCAATATTACCATGC | 58.219 | 36.000 | 27.32 | 0.00 | 0.00 | 4.06 |
116 | 117 | 9.061610 | GTTTGTTCGAACTTCAATATTACCATG | 57.938 | 33.333 | 27.32 | 0.00 | 0.00 | 3.66 |
117 | 118 | 7.960738 | CGTTTGTTCGAACTTCAATATTACCAT | 59.039 | 33.333 | 27.32 | 0.00 | 0.00 | 3.55 |
118 | 119 | 7.171167 | TCGTTTGTTCGAACTTCAATATTACCA | 59.829 | 33.333 | 27.32 | 1.04 | 36.89 | 3.25 |
119 | 120 | 7.512297 | TCGTTTGTTCGAACTTCAATATTACC | 58.488 | 34.615 | 27.32 | 5.86 | 36.89 | 2.85 |
120 | 121 | 8.922738 | TTCGTTTGTTCGAACTTCAATATTAC | 57.077 | 30.769 | 27.32 | 9.05 | 43.36 | 1.89 |
121 | 122 | 9.588774 | CTTTCGTTTGTTCGAACTTCAATATTA | 57.411 | 29.630 | 27.32 | 2.47 | 46.89 | 0.98 |
122 | 123 | 8.126700 | ACTTTCGTTTGTTCGAACTTCAATATT | 58.873 | 29.630 | 27.32 | 4.30 | 46.89 | 1.28 |
123 | 124 | 7.636326 | ACTTTCGTTTGTTCGAACTTCAATAT | 58.364 | 30.769 | 27.32 | 4.78 | 46.89 | 1.28 |
124 | 125 | 7.007313 | ACTTTCGTTTGTTCGAACTTCAATA | 57.993 | 32.000 | 27.32 | 4.74 | 46.89 | 1.90 |
125 | 126 | 5.875930 | ACTTTCGTTTGTTCGAACTTCAAT | 58.124 | 33.333 | 27.32 | 3.46 | 46.89 | 2.57 |
126 | 127 | 5.285798 | ACTTTCGTTTGTTCGAACTTCAA | 57.714 | 34.783 | 27.32 | 15.19 | 46.89 | 2.69 |
127 | 128 | 4.932268 | ACTTTCGTTTGTTCGAACTTCA | 57.068 | 36.364 | 27.32 | 10.19 | 46.89 | 3.02 |
128 | 129 | 5.669857 | GTGTACTTTCGTTTGTTCGAACTTC | 59.330 | 40.000 | 27.32 | 16.23 | 46.89 | 3.01 |
129 | 130 | 5.120519 | TGTGTACTTTCGTTTGTTCGAACTT | 59.879 | 36.000 | 27.32 | 4.92 | 46.89 | 2.66 |
130 | 131 | 4.626604 | TGTGTACTTTCGTTTGTTCGAACT | 59.373 | 37.500 | 27.32 | 7.88 | 46.89 | 3.01 |
131 | 132 | 4.884707 | TGTGTACTTTCGTTTGTTCGAAC | 58.115 | 39.130 | 21.42 | 21.42 | 46.89 | 3.95 |
132 | 133 | 5.521010 | AGATGTGTACTTTCGTTTGTTCGAA | 59.479 | 36.000 | 0.00 | 0.00 | 45.87 | 3.71 |
133 | 134 | 5.045215 | AGATGTGTACTTTCGTTTGTTCGA | 58.955 | 37.500 | 0.00 | 0.00 | 38.08 | 3.71 |
134 | 135 | 5.324739 | AGATGTGTACTTTCGTTTGTTCG | 57.675 | 39.130 | 0.00 | 0.00 | 0.00 | 3.95 |
135 | 136 | 7.381678 | AGAGTAGATGTGTACTTTCGTTTGTTC | 59.618 | 37.037 | 0.00 | 0.00 | 33.18 | 3.18 |
136 | 137 | 7.208080 | AGAGTAGATGTGTACTTTCGTTTGTT | 58.792 | 34.615 | 0.00 | 0.00 | 33.18 | 2.83 |
137 | 138 | 6.746120 | AGAGTAGATGTGTACTTTCGTTTGT | 58.254 | 36.000 | 0.00 | 0.00 | 33.18 | 2.83 |
138 | 139 | 7.085116 | AGAGAGTAGATGTGTACTTTCGTTTG | 58.915 | 38.462 | 0.00 | 0.00 | 38.56 | 2.93 |
139 | 140 | 7.216973 | AGAGAGTAGATGTGTACTTTCGTTT | 57.783 | 36.000 | 0.00 | 0.00 | 38.56 | 3.60 |
140 | 141 | 6.821031 | AGAGAGTAGATGTGTACTTTCGTT | 57.179 | 37.500 | 0.00 | 0.00 | 38.56 | 3.85 |
141 | 142 | 6.402334 | CGAAGAGAGTAGATGTGTACTTTCGT | 60.402 | 42.308 | 11.41 | 5.67 | 38.56 | 3.85 |
142 | 143 | 5.960683 | CGAAGAGAGTAGATGTGTACTTTCG | 59.039 | 44.000 | 7.68 | 7.68 | 38.56 | 3.46 |
143 | 144 | 6.844254 | ACGAAGAGAGTAGATGTGTACTTTC | 58.156 | 40.000 | 0.00 | 1.13 | 35.38 | 2.62 |
144 | 145 | 6.655848 | AGACGAAGAGAGTAGATGTGTACTTT | 59.344 | 38.462 | 0.00 | 0.00 | 33.18 | 2.66 |
145 | 146 | 6.174760 | AGACGAAGAGAGTAGATGTGTACTT | 58.825 | 40.000 | 0.00 | 0.00 | 33.18 | 2.24 |
146 | 147 | 5.736813 | AGACGAAGAGAGTAGATGTGTACT | 58.263 | 41.667 | 0.00 | 0.00 | 35.88 | 2.73 |
147 | 148 | 5.581479 | TGAGACGAAGAGAGTAGATGTGTAC | 59.419 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
148 | 149 | 5.731591 | TGAGACGAAGAGAGTAGATGTGTA | 58.268 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
149 | 150 | 4.580868 | TGAGACGAAGAGAGTAGATGTGT | 58.419 | 43.478 | 0.00 | 0.00 | 0.00 | 3.72 |
150 | 151 | 5.553290 | TTGAGACGAAGAGAGTAGATGTG | 57.447 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
151 | 152 | 5.708230 | ACTTTGAGACGAAGAGAGTAGATGT | 59.292 | 40.000 | 5.85 | 0.00 | 0.00 | 3.06 |
152 | 153 | 6.189677 | ACTTTGAGACGAAGAGAGTAGATG | 57.810 | 41.667 | 5.85 | 0.00 | 0.00 | 2.90 |
153 | 154 | 7.608761 | ACTTACTTTGAGACGAAGAGAGTAGAT | 59.391 | 37.037 | 5.85 | 0.00 | 0.00 | 1.98 |
154 | 155 | 6.935771 | ACTTACTTTGAGACGAAGAGAGTAGA | 59.064 | 38.462 | 5.85 | 0.00 | 0.00 | 2.59 |
155 | 156 | 7.136289 | ACTTACTTTGAGACGAAGAGAGTAG | 57.864 | 40.000 | 5.85 | 0.00 | 0.00 | 2.57 |
156 | 157 | 7.507733 | AACTTACTTTGAGACGAAGAGAGTA | 57.492 | 36.000 | 5.85 | 0.00 | 0.00 | 2.59 |
157 | 158 | 6.394025 | AACTTACTTTGAGACGAAGAGAGT | 57.606 | 37.500 | 5.85 | 6.06 | 0.00 | 3.24 |
158 | 159 | 7.142680 | AGAAACTTACTTTGAGACGAAGAGAG | 58.857 | 38.462 | 5.85 | 5.58 | 0.00 | 3.20 |
159 | 160 | 7.040473 | AGAAACTTACTTTGAGACGAAGAGA | 57.960 | 36.000 | 5.85 | 0.00 | 0.00 | 3.10 |
160 | 161 | 6.918569 | TGAGAAACTTACTTTGAGACGAAGAG | 59.081 | 38.462 | 5.85 | 0.00 | 0.00 | 2.85 |
161 | 162 | 6.802608 | TGAGAAACTTACTTTGAGACGAAGA | 58.197 | 36.000 | 5.85 | 0.00 | 0.00 | 2.87 |
162 | 163 | 7.222999 | ACTTGAGAAACTTACTTTGAGACGAAG | 59.777 | 37.037 | 0.00 | 0.00 | 0.00 | 3.79 |
163 | 164 | 7.039882 | ACTTGAGAAACTTACTTTGAGACGAA | 58.960 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
164 | 165 | 6.570692 | ACTTGAGAAACTTACTTTGAGACGA | 58.429 | 36.000 | 0.00 | 0.00 | 0.00 | 4.20 |
165 | 166 | 6.830114 | ACTTGAGAAACTTACTTTGAGACG | 57.170 | 37.500 | 0.00 | 0.00 | 0.00 | 4.18 |
166 | 167 | 8.451748 | ACAAACTTGAGAAACTTACTTTGAGAC | 58.548 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
167 | 168 | 8.561738 | ACAAACTTGAGAAACTTACTTTGAGA | 57.438 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
168 | 169 | 9.704098 | GTACAAACTTGAGAAACTTACTTTGAG | 57.296 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
169 | 170 | 9.444600 | AGTACAAACTTGAGAAACTTACTTTGA | 57.555 | 29.630 | 0.00 | 0.00 | 29.00 | 2.69 |
210 | 211 | 9.944376 | TCAAAATAAGTGTCTCAAGCTTAGTAT | 57.056 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
211 | 212 | 9.424319 | CTCAAAATAAGTGTCTCAAGCTTAGTA | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
212 | 213 | 8.150945 | TCTCAAAATAAGTGTCTCAAGCTTAGT | 58.849 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
213 | 214 | 8.539770 | TCTCAAAATAAGTGTCTCAAGCTTAG | 57.460 | 34.615 | 0.00 | 0.00 | 0.00 | 2.18 |
227 | 228 | 5.379706 | ACCTCCCTCCATCTCAAAATAAG | 57.620 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
234 | 235 | 3.421394 | AACATACCTCCCTCCATCTCA | 57.579 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
237 | 238 | 4.080299 | AGTTCAAACATACCTCCCTCCATC | 60.080 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
239 | 240 | 3.256704 | AGTTCAAACATACCTCCCTCCA | 58.743 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
247 | 248 | 4.600692 | AAGGCCAAAGTTCAAACATACC | 57.399 | 40.909 | 5.01 | 0.00 | 0.00 | 2.73 |
315 | 317 | 3.254657 | CCCGCCTTGTTTGTTCAATCTTA | 59.745 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
495 | 504 | 1.094073 | CAGATGAAGAGCAAGCGGGG | 61.094 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
508 | 517 | 1.670949 | GAGGCGAGCAGGACAGATGA | 61.671 | 60.000 | 0.00 | 0.00 | 0.00 | 2.92 |
518 | 527 | 2.123854 | AGGGATACGAGGCGAGCA | 60.124 | 61.111 | 0.00 | 0.00 | 37.60 | 4.26 |
562 | 574 | 0.764369 | TGCCAGGAGACAGGAAGTGT | 60.764 | 55.000 | 0.00 | 0.00 | 44.49 | 3.55 |
564 | 576 | 1.140312 | TTTGCCAGGAGACAGGAAGT | 58.860 | 50.000 | 0.00 | 0.00 | 39.95 | 3.01 |
595 | 607 | 2.991993 | GCTTGCTTTTTGCTCGCGC | 61.992 | 57.895 | 0.00 | 0.00 | 43.37 | 6.86 |
646 | 662 | 5.047306 | GGTTTGGAGGGAGATTTAAGTTTGG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 3.28 |
699 | 715 | 3.472652 | TGAATAACACTTGGCGTGACTT | 58.527 | 40.909 | 0.00 | 0.00 | 46.81 | 3.01 |
755 | 782 | 4.751767 | TTGCTTTTGGACTTTGTTGGAT | 57.248 | 36.364 | 0.00 | 0.00 | 0.00 | 3.41 |
888 | 929 | 1.609208 | ATCTATGGACCAAATGGCGC | 58.391 | 50.000 | 0.00 | 0.00 | 39.32 | 6.53 |
1104 | 1151 | 1.544825 | CCAGGTTCTCCTTCTCGGCA | 61.545 | 60.000 | 0.00 | 0.00 | 43.07 | 5.69 |
1512 | 1589 | 3.839432 | GCGGAGGAGGAAGGACGG | 61.839 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
1513 | 1590 | 1.889530 | AAAGCGGAGGAGGAAGGACG | 61.890 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1519 | 1596 | 1.990060 | CCCTGAAAGCGGAGGAGGA | 60.990 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
1526 | 1603 | 0.606401 | TCTTGAAGCCCTGAAAGCGG | 60.606 | 55.000 | 0.00 | 0.00 | 34.64 | 5.52 |
1534 | 1611 | 4.840115 | TGGATTTTGAAATCTTGAAGCCCT | 59.160 | 37.500 | 14.20 | 0.00 | 43.33 | 5.19 |
1544 | 1621 | 4.400567 | CACTCTCCCCTGGATTTTGAAATC | 59.599 | 45.833 | 7.73 | 7.73 | 43.12 | 2.17 |
1545 | 1622 | 4.347607 | CACTCTCCCCTGGATTTTGAAAT | 58.652 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
1567 | 1644 | 2.680312 | TCTCAGCAGCTAATCACACC | 57.320 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
1578 | 1655 | 3.875727 | CCTTATGACACCAATCTCAGCAG | 59.124 | 47.826 | 0.00 | 0.00 | 0.00 | 4.24 |
1607 | 1688 | 3.575351 | AACAGAGAGACGGGCACGC | 62.575 | 63.158 | 9.12 | 0.14 | 46.04 | 5.34 |
1609 | 1690 | 0.946221 | CACAACAGAGAGACGGGCAC | 60.946 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1610 | 1691 | 1.367471 | CACAACAGAGAGACGGGCA | 59.633 | 57.895 | 0.00 | 0.00 | 0.00 | 5.36 |
1811 | 1892 | 0.611714 | GGGGAACGTCATGTACCTGT | 59.388 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1843 | 1924 | 1.863267 | GAATCCAGGAGAGCGACATG | 58.137 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
1951 | 2033 | 2.187946 | CCGAGAAGCCGCTTGGAT | 59.812 | 61.111 | 11.20 | 0.00 | 41.25 | 3.41 |
2268 | 2354 | 0.178992 | CCTTTGGAAGCCCACTGACA | 60.179 | 55.000 | 0.00 | 0.00 | 43.41 | 3.58 |
2316 | 2404 | 2.636893 | AGGTGATCTTGAGCAGAGTTGT | 59.363 | 45.455 | 0.00 | 0.00 | 33.87 | 3.32 |
2429 | 2517 | 5.344743 | TTTAGGTACTGATGAGCAAGAGG | 57.655 | 43.478 | 0.00 | 0.00 | 41.52 | 3.69 |
2430 | 2518 | 5.289675 | CGTTTTAGGTACTGATGAGCAAGAG | 59.710 | 44.000 | 0.00 | 0.00 | 41.52 | 2.85 |
2431 | 2519 | 5.168569 | CGTTTTAGGTACTGATGAGCAAGA | 58.831 | 41.667 | 0.00 | 0.00 | 41.52 | 3.02 |
2432 | 2520 | 4.201724 | GCGTTTTAGGTACTGATGAGCAAG | 60.202 | 45.833 | 0.00 | 0.00 | 41.52 | 4.01 |
2436 | 2525 | 4.327357 | CACTGCGTTTTAGGTACTGATGAG | 59.673 | 45.833 | 0.00 | 0.00 | 41.52 | 2.90 |
2453 | 2542 | 1.583404 | GCAGAAAACAAACACACTGCG | 59.417 | 47.619 | 0.00 | 0.00 | 40.51 | 5.18 |
2565 | 2658 | 7.944554 | AGAAATTTTACCTCCAAAGTCATCTGA | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
2597 | 2690 | 4.228210 | TCTGATCTAACCCCATTGAAAGCT | 59.772 | 41.667 | 0.00 | 0.00 | 0.00 | 3.74 |
2604 | 2697 | 3.135530 | GCTCAGTCTGATCTAACCCCATT | 59.864 | 47.826 | 2.22 | 0.00 | 0.00 | 3.16 |
2664 | 2769 | 1.207791 | AGATCGTCTGCCTCCCATTT | 58.792 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2691 | 2796 | 1.305549 | GGACTTCCCGACCCTACCA | 60.306 | 63.158 | 0.00 | 0.00 | 0.00 | 3.25 |
2735 | 2840 | 1.952296 | AGCAAGGGAAATGATCGATGC | 59.048 | 47.619 | 0.54 | 0.00 | 33.97 | 3.91 |
2746 | 2851 | 1.554617 | TGTCGATGATCAGCAAGGGAA | 59.445 | 47.619 | 12.15 | 0.00 | 0.00 | 3.97 |
2747 | 2852 | 1.194218 | TGTCGATGATCAGCAAGGGA | 58.806 | 50.000 | 12.15 | 0.00 | 0.00 | 4.20 |
2806 | 2918 | 5.649831 | GGGGTATCTGCAAATGAGATATTCC | 59.350 | 44.000 | 0.00 | 0.00 | 35.40 | 3.01 |
2925 | 3039 | 1.161843 | AACAACATCCGGGCTAAACG | 58.838 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2936 | 3050 | 2.284952 | GGTGCAGCACAAAAACAACATC | 59.715 | 45.455 | 26.78 | 1.07 | 35.86 | 3.06 |
3072 | 3186 | 0.608130 | AGCATCGCCTACAGTGACAA | 59.392 | 50.000 | 0.00 | 0.00 | 37.96 | 3.18 |
3137 | 3251 | 6.633634 | TCGGTTAGAACTTGCGTTTTATTTTG | 59.366 | 34.615 | 0.00 | 0.00 | 32.39 | 2.44 |
3144 | 3258 | 4.823790 | AAATCGGTTAGAACTTGCGTTT | 57.176 | 36.364 | 0.00 | 0.00 | 32.39 | 3.60 |
3145 | 3259 | 4.273969 | TCAAAATCGGTTAGAACTTGCGTT | 59.726 | 37.500 | 0.00 | 0.00 | 35.68 | 4.84 |
3146 | 3260 | 3.810941 | TCAAAATCGGTTAGAACTTGCGT | 59.189 | 39.130 | 0.00 | 0.00 | 0.00 | 5.24 |
3151 | 3265 | 6.934645 | TCAGTTCATCAAAATCGGTTAGAACT | 59.065 | 34.615 | 0.00 | 0.00 | 43.52 | 3.01 |
3184 | 3298 | 1.154654 | GCGCAAGGACGAGTTTTCG | 60.155 | 57.895 | 0.30 | 0.00 | 45.69 | 3.46 |
3207 | 3321 | 2.513204 | CCAGGCATGACCAGCTCG | 60.513 | 66.667 | 0.00 | 0.00 | 43.14 | 5.03 |
3222 | 3336 | 4.182433 | TGGACCAGCACGTTGCCA | 62.182 | 61.111 | 6.39 | 0.00 | 46.52 | 4.92 |
3228 | 3342 | 0.817634 | TGTTTTCCTGGACCAGCACG | 60.818 | 55.000 | 16.72 | 2.80 | 0.00 | 5.34 |
3231 | 3345 | 1.692411 | AACTGTTTTCCTGGACCAGC | 58.308 | 50.000 | 16.72 | 2.46 | 0.00 | 4.85 |
3234 | 3348 | 3.813724 | GACAGTAACTGTTTTCCTGGACC | 59.186 | 47.826 | 14.74 | 0.00 | 45.44 | 4.46 |
3267 | 3381 | 0.820226 | CTCTCTCGTCATCCTTGGCA | 59.180 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
3294 | 3408 | 3.238597 | CTCCCCTCTAAATCTCTCCTGG | 58.761 | 54.545 | 0.00 | 0.00 | 0.00 | 4.45 |
3307 | 3421 | 2.037527 | GTCCGACCACTCCCCTCT | 59.962 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
3324 | 3438 | 3.315418 | CCATCAGTGAGATATGCTGTCG | 58.685 | 50.000 | 0.00 | 0.00 | 34.43 | 4.35 |
3383 | 3497 | 6.405953 | CGAGGAACATACTCCTACTTGTCATT | 60.406 | 42.308 | 0.00 | 0.00 | 46.33 | 2.57 |
3385 | 3499 | 4.398358 | CGAGGAACATACTCCTACTTGTCA | 59.602 | 45.833 | 0.00 | 0.00 | 46.33 | 3.58 |
3386 | 3500 | 4.202030 | CCGAGGAACATACTCCTACTTGTC | 60.202 | 50.000 | 0.00 | 0.00 | 46.33 | 3.18 |
3387 | 3501 | 3.700038 | CCGAGGAACATACTCCTACTTGT | 59.300 | 47.826 | 0.00 | 0.00 | 46.33 | 3.16 |
3388 | 3502 | 3.491104 | GCCGAGGAACATACTCCTACTTG | 60.491 | 52.174 | 0.00 | 0.00 | 46.33 | 3.16 |
3389 | 3503 | 2.694109 | GCCGAGGAACATACTCCTACTT | 59.306 | 50.000 | 0.00 | 0.00 | 46.33 | 2.24 |
3390 | 3504 | 2.091775 | AGCCGAGGAACATACTCCTACT | 60.092 | 50.000 | 0.00 | 0.00 | 46.33 | 2.57 |
3396 | 3510 | 2.180276 | AGAACAGCCGAGGAACATACT | 58.820 | 47.619 | 0.00 | 0.00 | 0.00 | 2.12 |
3397 | 3511 | 2.674796 | AGAACAGCCGAGGAACATAC | 57.325 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
3399 | 3513 | 2.224523 | TGAAAGAACAGCCGAGGAACAT | 60.225 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
3401 | 3515 | 1.531578 | GTGAAAGAACAGCCGAGGAAC | 59.468 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
3404 | 3518 | 1.151668 | CAGTGAAAGAACAGCCGAGG | 58.848 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3409 | 3523 | 3.004106 | ACAGATTGCAGTGAAAGAACAGC | 59.996 | 43.478 | 0.00 | 0.00 | 33.52 | 4.40 |
3411 | 3525 | 4.923893 | CAACAGATTGCAGTGAAAGAACA | 58.076 | 39.130 | 0.00 | 0.00 | 0.00 | 3.18 |
3439 | 3602 | 3.350833 | ACAGATGGTTCTCCTTGAATGC | 58.649 | 45.455 | 0.00 | 0.00 | 36.99 | 3.56 |
3440 | 3603 | 3.620374 | CGACAGATGGTTCTCCTTGAATG | 59.380 | 47.826 | 0.00 | 0.00 | 36.99 | 2.67 |
3441 | 3604 | 3.261897 | ACGACAGATGGTTCTCCTTGAAT | 59.738 | 43.478 | 0.00 | 0.00 | 36.99 | 2.57 |
3442 | 3605 | 2.632996 | ACGACAGATGGTTCTCCTTGAA | 59.367 | 45.455 | 0.00 | 0.00 | 34.23 | 2.69 |
3444 | 3607 | 2.232452 | AGACGACAGATGGTTCTCCTTG | 59.768 | 50.000 | 0.00 | 0.00 | 34.23 | 3.61 |
3455 | 3618 | 2.803956 | TCCTGGTTGTAGACGACAGAT | 58.196 | 47.619 | 2.55 | 0.00 | 39.88 | 2.90 |
3456 | 3619 | 2.281539 | TCCTGGTTGTAGACGACAGA | 57.718 | 50.000 | 2.55 | 0.00 | 39.88 | 3.41 |
3518 | 3681 | 3.131396 | GACCATGTTGATACGGACATCC | 58.869 | 50.000 | 0.00 | 0.00 | 34.42 | 3.51 |
3533 | 3696 | 5.188434 | ACTGGTTACATTGAGATGACCATG | 58.812 | 41.667 | 0.00 | 0.00 | 38.65 | 3.66 |
3534 | 3697 | 5.441718 | ACTGGTTACATTGAGATGACCAT | 57.558 | 39.130 | 0.00 | 0.00 | 38.65 | 3.55 |
3535 | 3698 | 4.908601 | ACTGGTTACATTGAGATGACCA | 57.091 | 40.909 | 0.00 | 0.00 | 37.65 | 4.02 |
3536 | 3699 | 5.585047 | GGTTACTGGTTACATTGAGATGACC | 59.415 | 44.000 | 0.00 | 0.00 | 36.73 | 4.02 |
3537 | 3700 | 5.291128 | CGGTTACTGGTTACATTGAGATGAC | 59.709 | 44.000 | 0.00 | 0.00 | 36.73 | 3.06 |
3538 | 3701 | 5.416083 | CGGTTACTGGTTACATTGAGATGA | 58.584 | 41.667 | 0.00 | 0.00 | 36.73 | 2.92 |
3539 | 3702 | 4.570772 | CCGGTTACTGGTTACATTGAGATG | 59.429 | 45.833 | 1.23 | 0.00 | 39.25 | 2.90 |
3540 | 3703 | 4.224370 | ACCGGTTACTGGTTACATTGAGAT | 59.776 | 41.667 | 10.55 | 0.00 | 35.82 | 2.75 |
3541 | 3704 | 3.579586 | ACCGGTTACTGGTTACATTGAGA | 59.420 | 43.478 | 10.55 | 0.00 | 35.82 | 3.27 |
3542 | 3705 | 3.934068 | ACCGGTTACTGGTTACATTGAG | 58.066 | 45.455 | 10.55 | 0.00 | 35.82 | 3.02 |
3552 | 3715 | 1.974875 | GGCCCAAACCGGTTACTGG | 60.975 | 63.158 | 25.34 | 25.34 | 0.00 | 4.00 |
3560 | 3723 | 2.824041 | CGATCCTGGCCCAAACCG | 60.824 | 66.667 | 0.00 | 0.00 | 0.00 | 4.44 |
3576 | 3739 | 8.247562 | TGGATTATACAAGAAAATCCCAAAACG | 58.752 | 33.333 | 10.06 | 0.00 | 45.37 | 3.60 |
3614 | 3777 | 5.344743 | AACATCAGTTCTGATGATACGGT | 57.655 | 39.130 | 34.68 | 17.74 | 46.25 | 4.83 |
3712 | 3937 | 6.348213 | CTGTATGCACAACACCTTTAGGTTAC | 60.348 | 42.308 | 0.00 | 0.00 | 39.48 | 2.50 |
3736 | 3961 | 4.471904 | TGCTCGGTTGAACAGATTATCT | 57.528 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
3737 | 3962 | 5.741388 | AATGCTCGGTTGAACAGATTATC | 57.259 | 39.130 | 0.00 | 0.00 | 0.00 | 1.75 |
3738 | 3963 | 5.237344 | GCTAATGCTCGGTTGAACAGATTAT | 59.763 | 40.000 | 0.00 | 0.00 | 36.03 | 1.28 |
3739 | 3964 | 4.570772 | GCTAATGCTCGGTTGAACAGATTA | 59.429 | 41.667 | 0.00 | 0.00 | 36.03 | 1.75 |
3740 | 3965 | 3.375299 | GCTAATGCTCGGTTGAACAGATT | 59.625 | 43.478 | 0.00 | 0.00 | 36.03 | 2.40 |
3741 | 3966 | 2.939103 | GCTAATGCTCGGTTGAACAGAT | 59.061 | 45.455 | 0.00 | 0.00 | 36.03 | 2.90 |
3742 | 3967 | 2.346803 | GCTAATGCTCGGTTGAACAGA | 58.653 | 47.619 | 0.00 | 0.00 | 36.03 | 3.41 |
3743 | 3968 | 2.813779 | GCTAATGCTCGGTTGAACAG | 57.186 | 50.000 | 0.00 | 0.00 | 36.03 | 3.16 |
3755 | 3980 | 3.944015 | ACAAGTTGAGATGGAGCTAATGC | 59.056 | 43.478 | 10.54 | 0.00 | 40.05 | 3.56 |
3756 | 3981 | 4.940046 | ACACAAGTTGAGATGGAGCTAATG | 59.060 | 41.667 | 10.54 | 0.00 | 0.00 | 1.90 |
3757 | 3982 | 5.171339 | ACACAAGTTGAGATGGAGCTAAT | 57.829 | 39.130 | 10.54 | 0.00 | 0.00 | 1.73 |
3758 | 3983 | 4.623932 | ACACAAGTTGAGATGGAGCTAA | 57.376 | 40.909 | 10.54 | 0.00 | 0.00 | 3.09 |
3759 | 3984 | 4.382040 | GCTACACAAGTTGAGATGGAGCTA | 60.382 | 45.833 | 17.72 | 0.00 | 0.00 | 3.32 |
3760 | 3985 | 3.618507 | GCTACACAAGTTGAGATGGAGCT | 60.619 | 47.826 | 17.72 | 0.00 | 0.00 | 4.09 |
3761 | 3986 | 2.675348 | GCTACACAAGTTGAGATGGAGC | 59.325 | 50.000 | 10.54 | 11.45 | 0.00 | 4.70 |
3762 | 3987 | 3.265791 | GGCTACACAAGTTGAGATGGAG | 58.734 | 50.000 | 10.54 | 4.84 | 0.00 | 3.86 |
3763 | 3988 | 2.637382 | TGGCTACACAAGTTGAGATGGA | 59.363 | 45.455 | 10.54 | 0.00 | 0.00 | 3.41 |
3764 | 3989 | 2.744202 | GTGGCTACACAAGTTGAGATGG | 59.256 | 50.000 | 10.54 | 0.00 | 46.90 | 3.51 |
3777 | 4002 | 0.601558 | GACTGTTCGGAGTGGCTACA | 59.398 | 55.000 | 2.02 | 0.00 | 0.00 | 2.74 |
3778 | 4003 | 0.601558 | TGACTGTTCGGAGTGGCTAC | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3788 | 4013 | 2.674852 | CCAGATTGATGGTGACTGTTCG | 59.325 | 50.000 | 0.00 | 0.00 | 35.47 | 3.95 |
3789 | 4014 | 3.012518 | CCCAGATTGATGGTGACTGTTC | 58.987 | 50.000 | 0.00 | 0.00 | 38.81 | 3.18 |
3850 | 4075 | 5.596361 | ACATTGGTTGATGGTGACTGTTTTA | 59.404 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.