Multiple sequence alignment - TraesCS6D01G137800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G137800 chr6D 100.000 9319 0 0 1 9319 106423321 106432639 0.000000e+00 17210.0
1 TraesCS6D01G137800 chr6D 89.494 257 16 5 9062 9307 456304910 456305166 1.950000e-81 315.0
2 TraesCS6D01G137800 chr6D 100.000 32 0 0 5332 5363 106428620 106428651 1.010000e-04 60.2
3 TraesCS6D01G137800 chr6D 100.000 32 0 0 5300 5331 106428652 106428683 1.010000e-04 60.2
4 TraesCS6D01G137800 chr6B 94.870 5244 178 34 152 5340 193466616 193471823 0.000000e+00 8109.0
5 TraesCS6D01G137800 chr6B 95.632 3365 65 17 5332 8624 193471784 193475138 0.000000e+00 5325.0
6 TraesCS6D01G137800 chr6B 91.513 271 14 4 6029 6291 19354196 19354465 1.910000e-96 364.0
7 TraesCS6D01G137800 chr6B 90.775 271 16 3 6029 6291 101938256 101937987 4.140000e-93 353.0
8 TraesCS6D01G137800 chr6B 88.189 254 25 5 9065 9314 134669308 134669560 1.970000e-76 298.0
9 TraesCS6D01G137800 chr6B 92.784 97 6 1 8659 8754 193475141 193475237 1.260000e-28 139.0
10 TraesCS6D01G137800 chr6A 96.698 4664 131 13 681 5340 129738031 129742675 0.000000e+00 7738.0
11 TraesCS6D01G137800 chr6A 94.987 3531 80 32 5332 8790 129742636 129746141 0.000000e+00 5450.0
12 TraesCS6D01G137800 chr6A 92.913 508 31 5 152 656 129737142 129737647 0.000000e+00 734.0
13 TraesCS6D01G137800 chr6A 96.825 63 2 0 8942 9004 129746217 129746279 1.280000e-18 106.0
14 TraesCS6D01G137800 chr6A 92.727 55 4 0 8781 8835 522037895 522037841 7.760000e-11 80.5
15 TraesCS6D01G137800 chr6A 100.000 32 0 0 100 131 91338348 91338317 1.010000e-04 60.2
16 TraesCS6D01G137800 chr1A 87.042 1119 103 26 6483 7579 337010184 337009086 0.000000e+00 1225.0
17 TraesCS6D01G137800 chr1A 84.615 871 104 24 3281 4128 337013240 337012377 0.000000e+00 839.0
18 TraesCS6D01G137800 chr1A 82.898 766 118 11 1000 1759 337016402 337015644 0.000000e+00 676.0
19 TraesCS6D01G137800 chr1A 81.291 604 74 24 5490 6060 337011395 337010798 3.970000e-123 453.0
20 TraesCS6D01G137800 chr1A 81.875 480 75 10 4659 5131 337012037 337011563 2.440000e-105 394.0
21 TraesCS6D01G137800 chr1A 87.983 233 24 4 9067 9299 347914423 347914651 1.190000e-68 272.0
22 TraesCS6D01G137800 chr1D 85.053 1231 145 20 6376 7586 262708375 262707164 0.000000e+00 1218.0
23 TraesCS6D01G137800 chr1D 80.743 1589 235 55 2592 4128 262711872 262710303 0.000000e+00 1173.0
24 TraesCS6D01G137800 chr1D 82.274 818 130 12 998 1809 262715361 262714553 0.000000e+00 693.0
25 TraesCS6D01G137800 chr1D 81.364 601 78 25 5490 6060 262709317 262708721 8.530000e-125 459.0
26 TraesCS6D01G137800 chr1D 82.046 479 72 12 4659 5131 262709960 262709490 6.780000e-106 396.0
27 TraesCS6D01G137800 chr1B 85.065 1232 143 27 6376 7586 348798623 348797412 0.000000e+00 1218.0
28 TraesCS6D01G137800 chr1B 80.860 1604 233 57 2572 4128 348804838 348803262 0.000000e+00 1194.0
29 TraesCS6D01G137800 chr1B 81.641 768 105 18 998 1759 348806432 348805695 1.040000e-168 604.0
30 TraesCS6D01G137800 chr1B 82.353 544 65 20 5490 6007 348799660 348799122 2.390000e-120 444.0
31 TraesCS6D01G137800 chr1B 82.628 449 69 8 4690 5131 348800281 348799835 1.130000e-103 388.0
32 TraesCS6D01G137800 chr1B 91.513 271 14 4 6029 6291 639062469 639062738 1.910000e-96 364.0
33 TraesCS6D01G137800 chr1B 94.340 53 2 1 8781 8833 470541492 470541543 7.760000e-11 80.5
34 TraesCS6D01G137800 chr1B 100.000 32 0 0 100 131 546954005 546954036 1.010000e-04 60.2
35 TraesCS6D01G137800 chr2B 91.882 271 12 4 6029 6291 179157147 179157415 4.110000e-98 370.0
36 TraesCS6D01G137800 chr2B 88.889 63 7 0 8771 8833 797634565 797634627 2.790000e-10 78.7
37 TraesCS6D01G137800 chr2B 84.932 73 7 4 8758 8830 785746733 785746801 4.670000e-08 71.3
38 TraesCS6D01G137800 chr2B 100.000 32 0 0 100 131 774662011 774662042 1.010000e-04 60.2
39 TraesCS6D01G137800 chr2B 100.000 32 0 0 100 131 779253572 779253541 1.010000e-04 60.2
40 TraesCS6D01G137800 chr3B 90.775 271 16 3 6029 6291 42572567 42572298 4.140000e-93 353.0
41 TraesCS6D01G137800 chr3B 88.561 271 22 3 6029 6291 789534949 789534680 4.200000e-83 320.0
42 TraesCS6D01G137800 chr2D 89.494 257 22 4 9067 9319 621972246 621971991 4.200000e-83 320.0
43 TraesCS6D01G137800 chr4B 88.235 255 28 2 9067 9319 665341556 665341302 4.230000e-78 303.0
44 TraesCS6D01G137800 chr3D 89.744 234 21 3 9089 9319 589754393 589754626 7.080000e-76 296.0
45 TraesCS6D01G137800 chr7B 88.372 215 20 4 9067 9278 605445853 605445641 4.320000e-63 254.0
46 TraesCS6D01G137800 chr7B 94.231 52 2 1 8782 8833 351909218 351909268 2.790000e-10 78.7
47 TraesCS6D01G137800 chr7B 97.297 37 1 0 100 136 27975290 27975326 7.810000e-06 63.9
48 TraesCS6D01G137800 chr7A 85.124 242 31 3 9067 9307 666153230 666153467 9.350000e-60 243.0
49 TraesCS6D01G137800 chr5D 98.039 51 1 0 8787 8837 122620210 122620260 1.290000e-13 89.8
50 TraesCS6D01G137800 chr7D 94.340 53 3 0 8784 8836 566094357 566094409 2.160000e-11 82.4
51 TraesCS6D01G137800 chr7D 100.000 32 0 0 100 131 113720651 113720620 1.010000e-04 60.2
52 TraesCS6D01G137800 chr5B 91.228 57 5 0 8777 8833 689943979 689944035 2.790000e-10 78.7
53 TraesCS6D01G137800 chr5B 94.000 50 2 1 8783 8832 684491018 684490970 3.610000e-09 75.0
54 TraesCS6D01G137800 chr5B 100.000 32 0 0 100 131 507119324 507119293 1.010000e-04 60.2
55 TraesCS6D01G137800 chr5A 93.182 44 1 2 100 142 522609347 522609389 7.810000e-06 63.9
56 TraesCS6D01G137800 chr4D 92.857 42 2 1 100 141 74097199 74097159 1.010000e-04 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G137800 chr6D 106423321 106432639 9318 False 17210.000000 17210 100.000000 1 9319 1 chr6D.!!$F1 9318
1 TraesCS6D01G137800 chr6B 193466616 193475237 8621 False 4524.333333 8109 94.428667 152 8754 3 chr6B.!!$F3 8602
2 TraesCS6D01G137800 chr6A 129737142 129746279 9137 False 3507.000000 7738 95.355750 152 9004 4 chr6A.!!$F1 8852
3 TraesCS6D01G137800 chr1A 337009086 337016402 7316 True 717.400000 1225 83.544200 1000 7579 5 chr1A.!!$R1 6579
4 TraesCS6D01G137800 chr1D 262707164 262715361 8197 True 787.800000 1218 82.296000 998 7586 5 chr1D.!!$R1 6588
5 TraesCS6D01G137800 chr1B 348797412 348806432 9020 True 769.600000 1218 82.509400 998 7586 5 chr1B.!!$R1 6588

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
724 1093 0.752009 TTTGTGCCTGGCGTTGGTAA 60.752 50.000 14.98 0.00 0.00 2.85 F
989 1360 1.134367 CTGGTGATGATTGCAGGCAAG 59.866 52.381 12.66 0.00 39.47 4.01 F
1791 2174 1.399714 ACAGCCATGCCATCTCATTG 58.600 50.000 0.00 0.00 0.00 2.82 F
2990 5487 0.390998 AGCTGGAGAAAGAGCTTCGC 60.391 55.000 0.00 0.00 43.15 4.70 F
4123 7522 2.262423 ACAAACCTCAGAGCTGGTTC 57.738 50.000 6.65 0.00 44.83 3.62 F
5488 11560 3.742433 ACCACATGTATGAGCTAGCTC 57.258 47.619 33.47 33.47 43.01 4.09 F
5871 11966 1.079503 GTTCCATTCTCCAGCGTGTC 58.920 55.000 0.00 0.00 0.00 3.67 F
7759 14199 0.630673 AGGGGTTGCATAGCATGGAA 59.369 50.000 0.00 0.00 38.76 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 2174 2.797087 GCAGGTGCATTATGTGTCATGC 60.797 50.000 0.00 7.08 45.20 4.06 R
2774 5266 0.542702 AGGGTGGCACAAAAGATGGG 60.543 55.000 20.82 0.00 44.16 4.00 R
3018 5515 1.048601 ACGAAGGTGTCACCATGTCT 58.951 50.000 24.02 0.00 41.95 3.41 R
4156 7558 1.993956 TTAAGGCCACAACACAGCAT 58.006 45.000 5.01 0.00 0.00 3.79 R
5871 11966 1.133253 CAATGTGCGCTCCACTTCG 59.867 57.895 9.73 0.00 44.92 3.79 R
6571 12987 5.187772 AGCACTACTGTTATGAAGGATGTCA 59.812 40.000 0.00 0.00 0.00 3.58 R
7839 14279 0.811616 CATACCAGAAGACCGCCTGC 60.812 60.000 0.00 0.00 0.00 4.85 R
9071 15565 0.034670 GGGGCTCAACAGCTGAAGAT 60.035 55.000 23.35 0.00 46.03 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 7.773864 TTTGACAAAGACAAACGTACTATCA 57.226 32.000 0.00 0.00 33.25 2.15
41 42 7.402811 TTGACAAAGACAAACGTACTATCAG 57.597 36.000 0.00 0.00 0.00 2.90
42 43 5.404366 TGACAAAGACAAACGTACTATCAGC 59.596 40.000 0.00 0.00 0.00 4.26
43 44 5.539048 ACAAAGACAAACGTACTATCAGCT 58.461 37.500 0.00 0.00 0.00 4.24
44 45 6.684686 ACAAAGACAAACGTACTATCAGCTA 58.315 36.000 0.00 0.00 0.00 3.32
45 46 7.149973 ACAAAGACAAACGTACTATCAGCTAA 58.850 34.615 0.00 0.00 0.00 3.09
46 47 7.115947 ACAAAGACAAACGTACTATCAGCTAAC 59.884 37.037 0.00 0.00 0.00 2.34
47 48 6.263516 AGACAAACGTACTATCAGCTAACA 57.736 37.500 0.00 0.00 0.00 2.41
48 49 6.864342 AGACAAACGTACTATCAGCTAACAT 58.136 36.000 0.00 0.00 0.00 2.71
49 50 7.993101 AGACAAACGTACTATCAGCTAACATA 58.007 34.615 0.00 0.00 0.00 2.29
50 51 8.464404 AGACAAACGTACTATCAGCTAACATAA 58.536 33.333 0.00 0.00 0.00 1.90
51 52 8.991243 ACAAACGTACTATCAGCTAACATAAA 57.009 30.769 0.00 0.00 0.00 1.40
52 53 9.426837 ACAAACGTACTATCAGCTAACATAAAA 57.573 29.630 0.00 0.00 0.00 1.52
77 78 9.790389 AAAACATTTTACATTTTGAGACGTACA 57.210 25.926 0.00 0.00 0.00 2.90
78 79 9.959749 AAACATTTTACATTTTGAGACGTACAT 57.040 25.926 0.00 0.00 0.00 2.29
79 80 8.948853 ACATTTTACATTTTGAGACGTACATG 57.051 30.769 0.00 0.00 0.00 3.21
80 81 8.564574 ACATTTTACATTTTGAGACGTACATGT 58.435 29.630 2.69 2.69 0.00 3.21
83 84 8.821147 TTTACATTTTGAGACGTACATGTAGT 57.179 30.769 5.62 6.74 0.00 2.73
84 85 8.821147 TTACATTTTGAGACGTACATGTAGTT 57.179 30.769 5.62 0.00 0.00 2.24
85 86 7.347508 ACATTTTGAGACGTACATGTAGTTC 57.652 36.000 5.62 5.71 0.00 3.01
86 87 7.152645 ACATTTTGAGACGTACATGTAGTTCT 58.847 34.615 5.62 10.60 0.00 3.01
87 88 7.328737 ACATTTTGAGACGTACATGTAGTTCTC 59.671 37.037 24.63 24.63 0.00 2.87
88 89 4.959596 TGAGACGTACATGTAGTTCTCC 57.040 45.455 26.57 16.33 0.00 3.71
89 90 3.693085 TGAGACGTACATGTAGTTCTCCC 59.307 47.826 26.57 13.84 0.00 4.30
90 91 3.946558 GAGACGTACATGTAGTTCTCCCT 59.053 47.826 22.57 10.61 0.00 4.20
91 92 3.946558 AGACGTACATGTAGTTCTCCCTC 59.053 47.826 5.62 0.00 0.00 4.30
92 93 3.946558 GACGTACATGTAGTTCTCCCTCT 59.053 47.826 5.62 0.00 0.00 3.69
93 94 3.695060 ACGTACATGTAGTTCTCCCTCTG 59.305 47.826 5.62 0.00 0.00 3.35
94 95 3.695060 CGTACATGTAGTTCTCCCTCTGT 59.305 47.826 5.62 0.00 0.00 3.41
95 96 4.880120 CGTACATGTAGTTCTCCCTCTGTA 59.120 45.833 5.62 0.00 0.00 2.74
96 97 5.356190 CGTACATGTAGTTCTCCCTCTGTAA 59.644 44.000 5.62 0.00 0.00 2.41
97 98 6.127814 CGTACATGTAGTTCTCCCTCTGTAAA 60.128 42.308 5.62 0.00 0.00 2.01
98 99 6.287589 ACATGTAGTTCTCCCTCTGTAAAG 57.712 41.667 0.00 0.00 0.00 1.85
99 100 6.017192 ACATGTAGTTCTCCCTCTGTAAAGA 58.983 40.000 0.00 0.00 0.00 2.52
100 101 6.497259 ACATGTAGTTCTCCCTCTGTAAAGAA 59.503 38.462 0.00 0.00 0.00 2.52
101 102 6.989155 TGTAGTTCTCCCTCTGTAAAGAAA 57.011 37.500 0.00 0.00 30.10 2.52
102 103 6.756221 TGTAGTTCTCCCTCTGTAAAGAAAC 58.244 40.000 0.00 0.00 30.10 2.78
103 104 4.884247 AGTTCTCCCTCTGTAAAGAAACG 58.116 43.478 0.00 0.00 30.10 3.60
104 105 3.314541 TCTCCCTCTGTAAAGAAACGC 57.685 47.619 0.00 0.00 0.00 4.84
105 106 2.897969 TCTCCCTCTGTAAAGAAACGCT 59.102 45.455 0.00 0.00 0.00 5.07
106 107 3.323979 TCTCCCTCTGTAAAGAAACGCTT 59.676 43.478 0.00 0.00 38.88 4.68
108 109 4.457466 TCCCTCTGTAAAGAAACGCTTTT 58.543 39.130 0.00 0.00 44.24 2.27
109 110 5.613329 TCCCTCTGTAAAGAAACGCTTTTA 58.387 37.500 0.00 0.00 44.24 1.52
110 111 6.235664 TCCCTCTGTAAAGAAACGCTTTTAT 58.764 36.000 0.00 0.00 44.24 1.40
111 112 7.388437 TCCCTCTGTAAAGAAACGCTTTTATA 58.612 34.615 0.00 0.00 44.24 0.98
112 113 8.044908 TCCCTCTGTAAAGAAACGCTTTTATAT 58.955 33.333 0.00 0.00 44.24 0.86
113 114 8.674607 CCCTCTGTAAAGAAACGCTTTTATATT 58.325 33.333 0.00 0.00 44.24 1.28
126 127 9.444600 AACGCTTTTATATTTCTTTACAGAGGA 57.555 29.630 0.00 0.00 0.00 3.71
127 128 9.444600 ACGCTTTTATATTTCTTTACAGAGGAA 57.555 29.630 0.00 0.00 0.00 3.36
128 129 9.922305 CGCTTTTATATTTCTTTACAGAGGAAG 57.078 33.333 0.00 0.00 0.00 3.46
169 170 4.364415 TCGTTCTCAAACAAGGGTTTTG 57.636 40.909 0.00 0.00 44.63 2.44
170 171 4.011023 TCGTTCTCAAACAAGGGTTTTGA 58.989 39.130 0.00 0.00 44.63 2.69
171 172 4.102649 CGTTCTCAAACAAGGGTTTTGAC 58.897 43.478 0.00 0.00 44.63 3.18
172 173 4.142469 CGTTCTCAAACAAGGGTTTTGACT 60.142 41.667 0.00 0.00 44.63 3.41
176 177 3.445805 TCAAACAAGGGTTTTGACTGGAC 59.554 43.478 0.00 0.00 44.63 4.02
177 178 2.818751 ACAAGGGTTTTGACTGGACA 57.181 45.000 0.00 0.00 0.00 4.02
180 181 3.221771 CAAGGGTTTTGACTGGACATGA 58.778 45.455 0.00 0.00 0.00 3.07
181 182 3.146104 AGGGTTTTGACTGGACATGAG 57.854 47.619 0.00 0.00 0.00 2.90
182 183 2.162681 GGGTTTTGACTGGACATGAGG 58.837 52.381 0.00 0.00 0.00 3.86
183 184 2.489073 GGGTTTTGACTGGACATGAGGT 60.489 50.000 0.00 0.00 0.00 3.85
186 187 2.566833 TTGACTGGACATGAGGTTGG 57.433 50.000 0.00 0.00 0.00 3.77
322 323 2.303022 AGTCCCTGACCAATATATGCCG 59.697 50.000 0.00 0.00 32.18 5.69
388 391 3.527641 GGTCGCCGAATCCTCTCT 58.472 61.111 0.00 0.00 0.00 3.10
414 417 2.125673 GCCGTAGAAGAAGCGCCA 60.126 61.111 2.29 0.00 0.00 5.69
484 494 2.841988 GGAGCGGGCAGGAGATCT 60.842 66.667 0.00 0.00 0.00 2.75
523 533 2.267961 GGTGGTACGGAAGCCCTG 59.732 66.667 0.00 0.00 0.00 4.45
550 560 2.067365 TGCGCCTGGATACTTCTAGA 57.933 50.000 4.18 0.00 32.42 2.43
593 603 4.662145 GAGCAATCAAATTCGTACCCTTG 58.338 43.478 0.00 0.00 0.00 3.61
630 640 3.869912 GCTTGAATCTGTCCAGTTAGCCA 60.870 47.826 0.00 0.00 0.00 4.75
667 677 6.904011 CGATTTGATCTAACATCAGCTTGTTC 59.096 38.462 7.05 0.00 40.25 3.18
724 1093 0.752009 TTTGTGCCTGGCGTTGGTAA 60.752 50.000 14.98 0.00 0.00 2.85
775 1146 1.497309 ATGTGTAGGTGGGGTGGGTG 61.497 60.000 0.00 0.00 0.00 4.61
813 1184 3.386237 GCCTCTGCGGGAGTCTGT 61.386 66.667 0.00 0.00 40.30 3.41
854 1225 4.835615 ACAAGAGTGACCACTATGACTTCT 59.164 41.667 17.11 2.48 42.66 2.85
937 1308 3.545366 TGGCGTATATGGCAGTACAAA 57.455 42.857 16.69 0.00 39.79 2.83
938 1309 4.079980 TGGCGTATATGGCAGTACAAAT 57.920 40.909 16.69 0.00 39.79 2.32
963 1334 4.884668 TTTGAAGTAGTCGGGTTCTGAT 57.115 40.909 0.00 0.00 0.00 2.90
964 1335 3.868757 TGAAGTAGTCGGGTTCTGATG 57.131 47.619 0.00 0.00 0.00 3.07
989 1360 1.134367 CTGGTGATGATTGCAGGCAAG 59.866 52.381 12.66 0.00 39.47 4.01
1223 1600 2.029020 TGTCAAGTCATTCGAGGGTGAG 60.029 50.000 0.00 0.00 0.00 3.51
1229 1606 3.417275 ATTCGAGGGTGAGAGCGCG 62.417 63.158 0.00 0.00 0.00 6.86
1244 1621 1.860078 CGCGTCTGGGTCAAAGTTC 59.140 57.895 0.00 0.00 0.00 3.01
1422 1800 3.950395 GCTCCAATTAATCAAGAGGCTGT 59.050 43.478 0.00 0.00 0.00 4.40
1791 2174 1.399714 ACAGCCATGCCATCTCATTG 58.600 50.000 0.00 0.00 0.00 2.82
1947 2344 8.308931 TGTTCTCCTTTGTTTATAGTACACGAT 58.691 33.333 0.00 0.00 0.00 3.73
2031 2433 6.567687 TCAAAGTGGAATTAATTGCGAGAA 57.432 33.333 14.09 0.00 0.00 2.87
2188 2598 5.544176 ACTCTCCTAGAATCTTGAACCAACA 59.456 40.000 0.00 0.00 0.00 3.33
2206 2616 4.393680 CCAACATCCAAAATTCAAGCCATG 59.606 41.667 0.00 0.00 0.00 3.66
2226 2636 4.662468 TGGAATTTTGTTAGTTGCAGCA 57.338 36.364 2.55 0.00 0.00 4.41
2432 4917 4.299586 TCCACTAAATCATTGAGGCACA 57.700 40.909 0.00 0.00 0.00 4.57
2453 4938 6.148480 GCACAGCCTGATAGTAGGATAAATTG 59.852 42.308 0.00 0.00 40.42 2.32
2495 4980 4.739793 AGAATGGATTCAAACTTGTGGGA 58.260 39.130 2.32 0.00 39.23 4.37
2665 5152 9.801873 TTAATTACTCAAATATCCTTTTGCTGC 57.198 29.630 0.00 0.00 36.69 5.25
2696 5184 3.327757 TCCATAACCCCATGTCATCTAGC 59.672 47.826 0.00 0.00 0.00 3.42
2990 5487 0.390998 AGCTGGAGAAAGAGCTTCGC 60.391 55.000 0.00 0.00 43.15 4.70
3018 5515 3.247442 CGTAATCAAGAACGTGCCAGTA 58.753 45.455 0.00 0.00 34.48 2.74
3195 6456 3.140325 TCCTGTTTGCTAACTTGGAGG 57.860 47.619 16.88 12.90 34.83 4.30
3200 6461 3.630312 TGTTTGCTAACTTGGAGGAACAC 59.370 43.478 12.20 0.00 35.24 3.32
3220 6481 4.939439 ACACTTTTCTAACACGTTTCCAGT 59.061 37.500 0.00 0.00 0.00 4.00
3231 6492 9.314321 CTAACACGTTTCCAGTTGATAAGATAT 57.686 33.333 0.00 0.00 0.00 1.63
3455 6835 4.022329 GGTTGATTTCCCCACTACTTGTTG 60.022 45.833 0.00 0.00 0.00 3.33
3503 6883 9.002600 GTACATGCATCATGATTATCTTAACCA 57.997 33.333 5.16 0.00 43.81 3.67
3517 6898 8.588290 TTATCTTAACCATGCAATGTAAACCT 57.412 30.769 0.00 0.00 44.81 3.50
3929 7316 5.182001 CGATCAGAAACAAGGAGGTTGATTT 59.818 40.000 0.00 0.00 38.60 2.17
3983 7381 8.200792 TGTAATTTTTGTGGAAGTTGCAAGTAT 58.799 29.630 7.33 0.00 0.00 2.12
4017 7415 3.859411 TGGTGTTTTCCTGTTGTTGTC 57.141 42.857 0.00 0.00 0.00 3.18
4123 7522 2.262423 ACAAACCTCAGAGCTGGTTC 57.738 50.000 6.65 0.00 44.83 3.62
4138 7540 4.638865 AGCTGGTTCGTGACTTTTTAGTTT 59.361 37.500 0.00 0.00 0.00 2.66
4361 7770 9.449719 GAGAGAAAATTCTATGTTCCCTTGTTA 57.550 33.333 0.00 0.00 37.73 2.41
4363 7772 9.232473 GAGAAAATTCTATGTTCCCTTGTTACT 57.768 33.333 0.00 0.00 37.73 2.24
4550 8058 4.837860 AGTAATGCCCTGGTCAAATTCAAA 59.162 37.500 0.00 0.00 0.00 2.69
4718 10763 4.003648 AGTTTGCCAGCTATGTTCTGTAC 58.996 43.478 0.00 0.00 0.00 2.90
4822 10877 7.029563 CCTTATGTAATTTCACTTTGCTGACC 58.970 38.462 0.00 0.00 0.00 4.02
5330 11398 8.797266 AGTTCAACGAAATTTATGTTCTTTCC 57.203 30.769 5.54 0.00 0.00 3.13
5331 11399 8.630037 AGTTCAACGAAATTTATGTTCTTTCCT 58.370 29.630 5.54 0.00 0.00 3.36
5332 11400 9.244799 GTTCAACGAAATTTATGTTCTTTCCTT 57.755 29.630 5.54 0.00 0.00 3.36
5346 11414 8.665643 TGTTCTTTCCTTATTTAGTTCAACGA 57.334 30.769 0.00 0.00 0.00 3.85
5347 11415 9.111613 TGTTCTTTCCTTATTTAGTTCAACGAA 57.888 29.630 0.00 0.00 0.00 3.85
5348 11416 9.940166 GTTCTTTCCTTATTTAGTTCAACGAAA 57.060 29.630 0.00 0.00 0.00 3.46
5363 11431 7.589954 AGTTCAACGAAATTTATGTTCTTTCCG 59.410 33.333 5.54 0.00 0.00 4.30
5409 11477 5.168569 TCTGTAAAATTCGGCAGTCTACTG 58.831 41.667 5.73 5.73 46.40 2.74
5428 11500 4.210331 ACTGATGTTTGGCTTGAAAGACT 58.790 39.130 0.00 0.00 34.24 3.24
5488 11560 3.742433 ACCACATGTATGAGCTAGCTC 57.258 47.619 33.47 33.47 43.01 4.09
5516 11588 5.279708 GGGGATCACTCTACCAATATGACAG 60.280 48.000 0.00 0.00 0.00 3.51
5871 11966 1.079503 GTTCCATTCTCCAGCGTGTC 58.920 55.000 0.00 0.00 0.00 3.67
6329 12584 6.201044 GTGATACATTTTGACTATCAGGACCG 59.799 42.308 0.00 0.00 29.48 4.79
6571 12987 1.471676 GCACGGCTTATGCTAGTGTCT 60.472 52.381 21.08 0.00 43.67 3.41
6756 13172 6.154203 TCTCATGTAGCAGAGATTAACTGG 57.846 41.667 0.00 0.00 36.05 4.00
7516 13956 1.843851 TCTGGGAAAGTGGACACAACT 59.156 47.619 5.14 0.00 0.00 3.16
7759 14199 0.630673 AGGGGTTGCATAGCATGGAA 59.369 50.000 0.00 0.00 38.76 3.53
7789 14229 4.974721 AAGGTTGCCAGCCACCGG 62.975 66.667 0.00 0.00 0.00 5.28
7839 14279 5.181811 TGTCTTCAATAGATGGTGCAAACAG 59.818 40.000 0.00 0.00 34.79 3.16
7940 14380 6.311445 CGCACATCCATCCATCTATTACTTAC 59.689 42.308 0.00 0.00 0.00 2.34
7942 14382 7.332926 GCACATCCATCCATCTATTACTTACTG 59.667 40.741 0.00 0.00 0.00 2.74
7988 14428 6.513180 TCTGATAATGATAACGACCCAAGTC 58.487 40.000 0.00 0.00 39.83 3.01
8024 14464 4.481368 TTGTTATCCTGGTGCGTATCTT 57.519 40.909 0.00 0.00 0.00 2.40
8360 14828 0.394899 ATGAGCTGGGCTGCCTAAAC 60.395 55.000 19.68 7.64 39.88 2.01
8368 14836 2.404789 CTGCCTAAACGCGCCATG 59.595 61.111 5.73 0.00 0.00 3.66
8489 14957 4.811969 TTGAATGATTGAAATGCTGCCT 57.188 36.364 0.00 0.00 0.00 4.75
8711 15203 1.341531 GGAGTGGGATACTGATCGGTG 59.658 57.143 17.78 0.00 40.53 4.94
8712 15204 2.307768 GAGTGGGATACTGATCGGTGA 58.692 52.381 17.78 2.10 40.53 4.02
8772 15266 4.566360 GCTCTATGCTTTTCTCAGTCAGAC 59.434 45.833 0.00 0.00 38.95 3.51
8776 15270 1.270358 GCTTTTCTCAGTCAGACCGGT 60.270 52.381 6.92 6.92 0.00 5.28
8777 15271 2.408050 CTTTTCTCAGTCAGACCGGTG 58.592 52.381 14.63 0.00 0.00 4.94
8790 15284 2.102588 AGACCGGTGTATTGGATGCTAC 59.897 50.000 14.63 0.00 0.00 3.58
8791 15285 2.102588 GACCGGTGTATTGGATGCTACT 59.897 50.000 14.63 0.00 0.00 2.57
8792 15286 2.102588 ACCGGTGTATTGGATGCTACTC 59.897 50.000 6.12 0.00 0.00 2.59
8793 15287 2.548067 CCGGTGTATTGGATGCTACTCC 60.548 54.545 0.00 0.00 35.74 3.85
8794 15288 2.548067 CGGTGTATTGGATGCTACTCCC 60.548 54.545 0.00 0.00 34.12 4.30
8796 15290 3.244249 GGTGTATTGGATGCTACTCCCTC 60.244 52.174 0.00 0.00 34.12 4.30
8798 15292 1.051812 ATTGGATGCTACTCCCTCCG 58.948 55.000 0.00 0.00 34.12 4.63
8799 15293 0.325296 TTGGATGCTACTCCCTCCGT 60.325 55.000 0.00 0.00 34.12 4.69
8800 15294 0.325296 TGGATGCTACTCCCTCCGTT 60.325 55.000 0.00 0.00 34.12 4.44
8801 15295 0.831307 GGATGCTACTCCCTCCGTTT 59.169 55.000 0.00 0.00 0.00 3.60
8802 15296 1.202545 GGATGCTACTCCCTCCGTTTC 60.203 57.143 0.00 0.00 0.00 2.78
8804 15298 1.344065 TGCTACTCCCTCCGTTTCAA 58.656 50.000 0.00 0.00 0.00 2.69
8806 15300 2.105134 TGCTACTCCCTCCGTTTCAAAA 59.895 45.455 0.00 0.00 0.00 2.44
8807 15301 3.244770 TGCTACTCCCTCCGTTTCAAAAT 60.245 43.478 0.00 0.00 0.00 1.82
8808 15302 4.020039 TGCTACTCCCTCCGTTTCAAAATA 60.020 41.667 0.00 0.00 0.00 1.40
8810 15304 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
8811 15305 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
8812 15306 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
8813 15307 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
8814 15308 5.183228 TCCCTCCGTTTCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
8815 15309 4.335594 CCCTCCGTTTCAAAATAGATGACC 59.664 45.833 0.00 0.00 0.00 4.02
8816 15310 5.186198 CCTCCGTTTCAAAATAGATGACCT 58.814 41.667 0.00 0.00 0.00 3.85
8817 15311 6.346096 CCTCCGTTTCAAAATAGATGACCTA 58.654 40.000 0.00 0.00 0.00 3.08
8818 15312 6.821665 CCTCCGTTTCAAAATAGATGACCTAA 59.178 38.462 0.00 0.00 0.00 2.69
8819 15313 7.201617 CCTCCGTTTCAAAATAGATGACCTAAC 60.202 40.741 0.00 0.00 0.00 2.34
8820 15314 7.391620 TCCGTTTCAAAATAGATGACCTAACT 58.608 34.615 0.00 0.00 0.00 2.24
8821 15315 7.881232 TCCGTTTCAAAATAGATGACCTAACTT 59.119 33.333 0.00 0.00 0.00 2.66
8822 15316 8.512138 CCGTTTCAAAATAGATGACCTAACTTT 58.488 33.333 0.00 0.00 0.00 2.66
8823 15317 9.329913 CGTTTCAAAATAGATGACCTAACTTTG 57.670 33.333 0.00 0.00 36.53 2.77
8836 15330 9.939802 ATGACCTAACTTTGTACTAACTTAAGG 57.060 33.333 7.53 0.00 0.00 2.69
8837 15331 7.874528 TGACCTAACTTTGTACTAACTTAAGGC 59.125 37.037 7.53 0.00 0.00 4.35
8850 15344 0.324923 TTAAGGCGTGGCTAGAGGGA 60.325 55.000 0.00 0.00 0.00 4.20
8878 15372 3.629398 GGATGCATCTAGTTCCAAGGTTG 59.371 47.826 25.28 0.00 0.00 3.77
8879 15373 4.517285 GATGCATCTAGTTCCAAGGTTGA 58.483 43.478 19.70 0.00 0.00 3.18
8880 15374 3.942829 TGCATCTAGTTCCAAGGTTGAG 58.057 45.455 0.00 0.00 0.00 3.02
8881 15375 3.582647 TGCATCTAGTTCCAAGGTTGAGA 59.417 43.478 0.00 0.00 0.00 3.27
8882 15376 3.935828 GCATCTAGTTCCAAGGTTGAGAC 59.064 47.826 0.00 0.00 0.00 3.36
8885 15379 5.623956 TCTAGTTCCAAGGTTGAGACAAA 57.376 39.130 0.00 0.00 0.00 2.83
8887 15381 3.555966 AGTTCCAAGGTTGAGACAAAGG 58.444 45.455 0.00 0.00 0.00 3.11
8888 15382 1.981256 TCCAAGGTTGAGACAAAGGC 58.019 50.000 0.00 0.00 0.00 4.35
8889 15383 1.214175 TCCAAGGTTGAGACAAAGGCA 59.786 47.619 0.00 0.00 0.00 4.75
8890 15384 2.158475 TCCAAGGTTGAGACAAAGGCAT 60.158 45.455 0.00 0.00 0.00 4.40
8891 15385 2.029649 CCAAGGTTGAGACAAAGGCATG 60.030 50.000 0.00 0.00 0.00 4.06
8892 15386 1.915141 AGGTTGAGACAAAGGCATGG 58.085 50.000 0.00 0.00 0.00 3.66
8893 15387 1.145738 AGGTTGAGACAAAGGCATGGT 59.854 47.619 0.00 0.00 0.00 3.55
8894 15388 1.541588 GGTTGAGACAAAGGCATGGTC 59.458 52.381 0.00 0.00 0.00 4.02
8895 15389 2.508526 GTTGAGACAAAGGCATGGTCT 58.491 47.619 0.00 0.00 44.12 3.85
8896 15390 3.559171 GGTTGAGACAAAGGCATGGTCTA 60.559 47.826 0.00 0.00 41.68 2.59
8897 15391 4.072131 GTTGAGACAAAGGCATGGTCTAA 58.928 43.478 0.00 0.00 41.68 2.10
8898 15392 3.942829 TGAGACAAAGGCATGGTCTAAG 58.057 45.455 0.00 0.00 41.68 2.18
8899 15393 3.582647 TGAGACAAAGGCATGGTCTAAGA 59.417 43.478 0.00 0.00 41.68 2.10
8900 15394 4.225942 TGAGACAAAGGCATGGTCTAAGAT 59.774 41.667 0.00 0.00 41.68 2.40
8901 15395 4.521146 AGACAAAGGCATGGTCTAAGATG 58.479 43.478 0.00 0.00 39.95 2.90
8902 15396 4.018960 AGACAAAGGCATGGTCTAAGATGT 60.019 41.667 0.00 0.00 39.95 3.06
8903 15397 4.012374 ACAAAGGCATGGTCTAAGATGTG 58.988 43.478 0.00 0.00 0.00 3.21
8904 15398 3.287867 AAGGCATGGTCTAAGATGTGG 57.712 47.619 0.00 0.00 0.00 4.17
8905 15399 2.481441 AGGCATGGTCTAAGATGTGGA 58.519 47.619 0.00 0.00 0.00 4.02
8906 15400 2.846206 AGGCATGGTCTAAGATGTGGAA 59.154 45.455 0.00 0.00 0.00 3.53
8907 15401 3.266772 AGGCATGGTCTAAGATGTGGAAA 59.733 43.478 0.00 0.00 0.00 3.13
8908 15402 4.016444 GGCATGGTCTAAGATGTGGAAAA 58.984 43.478 0.00 0.00 0.00 2.29
8909 15403 4.142381 GGCATGGTCTAAGATGTGGAAAAC 60.142 45.833 0.00 0.00 0.00 2.43
8910 15404 4.458989 GCATGGTCTAAGATGTGGAAAACA 59.541 41.667 0.00 0.00 44.79 2.83
8911 15405 5.392380 GCATGGTCTAAGATGTGGAAAACAG 60.392 44.000 0.00 0.00 43.64 3.16
8912 15406 5.560722 TGGTCTAAGATGTGGAAAACAGA 57.439 39.130 0.00 0.00 43.64 3.41
8913 15407 6.126863 TGGTCTAAGATGTGGAAAACAGAT 57.873 37.500 0.00 0.00 43.64 2.90
8914 15408 5.939883 TGGTCTAAGATGTGGAAAACAGATG 59.060 40.000 0.00 0.00 43.64 2.90
8915 15409 5.940470 GGTCTAAGATGTGGAAAACAGATGT 59.060 40.000 0.00 0.00 43.64 3.06
8916 15410 6.128172 GGTCTAAGATGTGGAAAACAGATGTG 60.128 42.308 0.00 0.00 43.64 3.21
8917 15411 4.510038 AAGATGTGGAAAACAGATGTGC 57.490 40.909 0.00 0.00 43.64 4.57
8918 15412 3.759581 AGATGTGGAAAACAGATGTGCT 58.240 40.909 0.00 0.00 43.64 4.40
8919 15413 4.147321 AGATGTGGAAAACAGATGTGCTT 58.853 39.130 0.00 0.00 43.64 3.91
8920 15414 3.713858 TGTGGAAAACAGATGTGCTTG 57.286 42.857 0.00 0.00 33.78 4.01
8921 15415 3.023119 TGTGGAAAACAGATGTGCTTGT 58.977 40.909 0.00 0.00 33.78 3.16
8922 15416 3.446873 TGTGGAAAACAGATGTGCTTGTT 59.553 39.130 0.00 0.00 33.78 2.83
8923 15417 4.642437 TGTGGAAAACAGATGTGCTTGTTA 59.358 37.500 0.00 0.00 33.78 2.41
8924 15418 5.126222 TGTGGAAAACAGATGTGCTTGTTAA 59.874 36.000 0.00 0.00 33.78 2.01
8925 15419 5.687285 GTGGAAAACAGATGTGCTTGTTAAG 59.313 40.000 0.00 0.00 0.00 1.85
8926 15420 5.221224 TGGAAAACAGATGTGCTTGTTAAGG 60.221 40.000 0.00 0.00 0.00 2.69
8927 15421 5.221244 GGAAAACAGATGTGCTTGTTAAGGT 60.221 40.000 0.00 0.00 0.00 3.50
8928 15422 5.438761 AAACAGATGTGCTTGTTAAGGTC 57.561 39.130 0.00 0.00 0.00 3.85
8929 15423 4.085357 ACAGATGTGCTTGTTAAGGTCA 57.915 40.909 0.00 0.00 0.00 4.02
8930 15424 4.460263 ACAGATGTGCTTGTTAAGGTCAA 58.540 39.130 0.00 0.00 0.00 3.18
8931 15425 4.887071 ACAGATGTGCTTGTTAAGGTCAAA 59.113 37.500 0.00 0.00 0.00 2.69
8932 15426 5.359576 ACAGATGTGCTTGTTAAGGTCAAAA 59.640 36.000 0.00 0.00 0.00 2.44
8933 15427 6.040842 ACAGATGTGCTTGTTAAGGTCAAAAT 59.959 34.615 0.00 0.00 0.00 1.82
8934 15428 6.925165 CAGATGTGCTTGTTAAGGTCAAAATT 59.075 34.615 0.00 0.00 0.00 1.82
8935 15429 7.439056 CAGATGTGCTTGTTAAGGTCAAAATTT 59.561 33.333 0.00 0.00 0.00 1.82
8936 15430 7.986889 AGATGTGCTTGTTAAGGTCAAAATTTT 59.013 29.630 0.00 0.00 0.00 1.82
8937 15431 7.532682 TGTGCTTGTTAAGGTCAAAATTTTC 57.467 32.000 0.00 0.00 0.00 2.29
8938 15432 6.536941 TGTGCTTGTTAAGGTCAAAATTTTCC 59.463 34.615 0.00 0.29 0.00 3.13
8939 15433 6.761242 GTGCTTGTTAAGGTCAAAATTTTCCT 59.239 34.615 0.00 2.85 0.00 3.36
8940 15434 7.923878 GTGCTTGTTAAGGTCAAAATTTTCCTA 59.076 33.333 10.67 0.00 0.00 2.94
8949 15443 5.706833 GGTCAAAATTTTCCTACGGAGGTTA 59.293 40.000 15.01 0.00 44.19 2.85
9004 15498 3.665323 GCAACATCACAACATGTCGACTC 60.665 47.826 17.92 0.00 35.87 3.36
9005 15499 3.385193 ACATCACAACATGTCGACTCA 57.615 42.857 17.92 0.00 30.76 3.41
9006 15500 3.727726 ACATCACAACATGTCGACTCAA 58.272 40.909 17.92 0.00 30.76 3.02
9007 15501 4.126437 ACATCACAACATGTCGACTCAAA 58.874 39.130 17.92 0.00 30.76 2.69
9008 15502 4.574421 ACATCACAACATGTCGACTCAAAA 59.426 37.500 17.92 0.00 30.76 2.44
9009 15503 4.794248 TCACAACATGTCGACTCAAAAG 57.206 40.909 17.92 5.13 0.00 2.27
9010 15504 4.188462 TCACAACATGTCGACTCAAAAGT 58.812 39.130 17.92 5.76 38.88 2.66
9011 15505 4.033932 TCACAACATGTCGACTCAAAAGTG 59.966 41.667 17.92 16.74 35.28 3.16
9012 15506 3.938963 ACAACATGTCGACTCAAAAGTGT 59.061 39.130 17.92 8.72 35.28 3.55
9013 15507 4.394920 ACAACATGTCGACTCAAAAGTGTT 59.605 37.500 17.92 12.21 35.28 3.32
9014 15508 5.106317 ACAACATGTCGACTCAAAAGTGTTT 60.106 36.000 17.92 5.37 35.28 2.83
9015 15509 4.908736 ACATGTCGACTCAAAAGTGTTTG 58.091 39.130 17.92 0.00 44.71 2.93
9016 15510 4.394920 ACATGTCGACTCAAAAGTGTTTGT 59.605 37.500 17.92 0.00 43.90 2.83
9017 15511 5.583061 ACATGTCGACTCAAAAGTGTTTGTA 59.417 36.000 17.92 0.00 43.90 2.41
9018 15512 5.712217 TGTCGACTCAAAAGTGTTTGTAG 57.288 39.130 17.92 0.00 43.90 2.74
9019 15513 5.412640 TGTCGACTCAAAAGTGTTTGTAGA 58.587 37.500 17.92 0.00 43.90 2.59
9020 15514 6.046593 TGTCGACTCAAAAGTGTTTGTAGAT 58.953 36.000 17.92 0.00 43.90 1.98
9021 15515 6.537301 TGTCGACTCAAAAGTGTTTGTAGATT 59.463 34.615 17.92 0.00 43.90 2.40
9022 15516 6.846283 GTCGACTCAAAAGTGTTTGTAGATTG 59.154 38.462 8.70 0.00 43.90 2.67
9023 15517 6.537301 TCGACTCAAAAGTGTTTGTAGATTGT 59.463 34.615 0.00 0.00 43.90 2.71
9024 15518 6.628856 CGACTCAAAAGTGTTTGTAGATTGTG 59.371 38.462 0.00 0.00 43.90 3.33
9025 15519 6.265577 ACTCAAAAGTGTTTGTAGATTGTGC 58.734 36.000 0.00 0.00 43.90 4.57
9026 15520 5.270083 TCAAAAGTGTTTGTAGATTGTGCG 58.730 37.500 0.00 0.00 43.90 5.34
9027 15521 3.896648 AAGTGTTTGTAGATTGTGCGG 57.103 42.857 0.00 0.00 0.00 5.69
9028 15522 3.120321 AGTGTTTGTAGATTGTGCGGA 57.880 42.857 0.00 0.00 0.00 5.54
9029 15523 3.674997 AGTGTTTGTAGATTGTGCGGAT 58.325 40.909 0.00 0.00 0.00 4.18
9030 15524 3.684788 AGTGTTTGTAGATTGTGCGGATC 59.315 43.478 0.00 0.00 0.00 3.36
9031 15525 3.435327 GTGTTTGTAGATTGTGCGGATCA 59.565 43.478 0.00 0.00 0.00 2.92
9032 15526 3.684305 TGTTTGTAGATTGTGCGGATCAG 59.316 43.478 0.00 0.00 0.00 2.90
9033 15527 3.885724 TTGTAGATTGTGCGGATCAGA 57.114 42.857 0.00 0.00 0.00 3.27
9034 15528 4.406648 TTGTAGATTGTGCGGATCAGAT 57.593 40.909 0.00 0.00 0.00 2.90
9035 15529 5.529581 TTGTAGATTGTGCGGATCAGATA 57.470 39.130 0.00 0.00 0.00 1.98
9036 15530 5.529581 TGTAGATTGTGCGGATCAGATAA 57.470 39.130 0.00 0.00 0.00 1.75
9037 15531 5.289595 TGTAGATTGTGCGGATCAGATAAC 58.710 41.667 0.00 0.00 0.00 1.89
9038 15532 4.679373 AGATTGTGCGGATCAGATAACT 57.321 40.909 0.00 0.00 0.00 2.24
9039 15533 4.626042 AGATTGTGCGGATCAGATAACTC 58.374 43.478 0.00 0.00 0.00 3.01
9040 15534 3.885724 TTGTGCGGATCAGATAACTCA 57.114 42.857 0.00 0.00 0.00 3.41
9041 15535 4.406648 TTGTGCGGATCAGATAACTCAT 57.593 40.909 0.00 0.00 0.00 2.90
9042 15536 3.721035 TGTGCGGATCAGATAACTCATG 58.279 45.455 0.00 0.00 0.00 3.07
9043 15537 3.062763 GTGCGGATCAGATAACTCATGG 58.937 50.000 0.00 0.00 0.00 3.66
9044 15538 2.072298 GCGGATCAGATAACTCATGGC 58.928 52.381 0.00 0.00 0.00 4.40
9045 15539 2.332104 CGGATCAGATAACTCATGGCG 58.668 52.381 0.00 0.00 0.00 5.69
9046 15540 2.288457 CGGATCAGATAACTCATGGCGT 60.288 50.000 0.00 0.00 0.00 5.68
9047 15541 3.321497 GGATCAGATAACTCATGGCGTC 58.679 50.000 0.00 0.00 0.00 5.19
9048 15542 3.243873 GGATCAGATAACTCATGGCGTCA 60.244 47.826 0.00 0.00 0.00 4.35
9049 15543 4.562347 GGATCAGATAACTCATGGCGTCAT 60.562 45.833 0.00 0.00 0.00 3.06
9050 15544 4.406648 TCAGATAACTCATGGCGTCATT 57.593 40.909 0.00 0.00 0.00 2.57
9051 15545 4.371786 TCAGATAACTCATGGCGTCATTC 58.628 43.478 0.00 0.00 0.00 2.67
9052 15546 4.100035 TCAGATAACTCATGGCGTCATTCT 59.900 41.667 0.00 0.00 0.00 2.40
9053 15547 4.447054 CAGATAACTCATGGCGTCATTCTC 59.553 45.833 0.00 0.00 0.00 2.87
9054 15548 4.343526 AGATAACTCATGGCGTCATTCTCT 59.656 41.667 0.00 0.00 0.00 3.10
9055 15549 2.306341 ACTCATGGCGTCATTCTCTG 57.694 50.000 0.00 0.00 0.00 3.35
9056 15550 0.935898 CTCATGGCGTCATTCTCTGC 59.064 55.000 0.00 0.00 0.00 4.26
9057 15551 0.538584 TCATGGCGTCATTCTCTGCT 59.461 50.000 0.00 0.00 0.00 4.24
9058 15552 0.935898 CATGGCGTCATTCTCTGCTC 59.064 55.000 0.00 0.00 0.00 4.26
9059 15553 0.529337 ATGGCGTCATTCTCTGCTCG 60.529 55.000 0.00 0.00 0.00 5.03
9060 15554 1.139734 GGCGTCATTCTCTGCTCGA 59.860 57.895 0.00 0.00 0.00 4.04
9061 15555 0.458543 GGCGTCATTCTCTGCTCGAA 60.459 55.000 0.00 0.00 0.00 3.71
9062 15556 1.565305 GCGTCATTCTCTGCTCGAAT 58.435 50.000 0.00 0.00 0.00 3.34
9063 15557 2.543861 GGCGTCATTCTCTGCTCGAATA 60.544 50.000 0.00 0.00 30.40 1.75
9064 15558 3.312828 GCGTCATTCTCTGCTCGAATAT 58.687 45.455 0.00 0.00 30.40 1.28
9065 15559 4.476862 GCGTCATTCTCTGCTCGAATATA 58.523 43.478 0.00 0.00 30.40 0.86
9066 15560 4.917998 GCGTCATTCTCTGCTCGAATATAA 59.082 41.667 0.00 0.00 30.40 0.98
9067 15561 5.060323 GCGTCATTCTCTGCTCGAATATAAG 59.940 44.000 0.00 0.00 30.40 1.73
9068 15562 6.374578 CGTCATTCTCTGCTCGAATATAAGA 58.625 40.000 0.00 0.00 30.40 2.10
9069 15563 6.522855 CGTCATTCTCTGCTCGAATATAAGAG 59.477 42.308 3.68 3.68 36.53 2.85
9087 15581 1.397692 GAGCATCTTCAGCTGTTGAGC 59.602 52.381 14.67 15.88 43.58 4.26
9095 15589 3.727387 GCTGTTGAGCCCCTAGGA 58.273 61.111 11.48 0.00 39.57 2.94
9096 15590 1.524482 GCTGTTGAGCCCCTAGGAG 59.476 63.158 11.48 0.00 39.57 3.69
9097 15591 1.977293 GCTGTTGAGCCCCTAGGAGG 61.977 65.000 11.48 11.20 39.57 4.30
9134 15628 3.070576 GGGGCTGCTGGCGAATTT 61.071 61.111 11.02 0.00 42.94 1.82
9135 15629 2.649129 GGGGCTGCTGGCGAATTTT 61.649 57.895 11.02 0.00 42.94 1.82
9136 15630 1.293179 GGGCTGCTGGCGAATTTTT 59.707 52.632 11.02 0.00 42.94 1.94
9152 15646 3.935371 TTTTTGCCTGGGGTTGAGA 57.065 47.368 0.00 0.00 0.00 3.27
9153 15647 2.166907 TTTTTGCCTGGGGTTGAGAA 57.833 45.000 0.00 0.00 0.00 2.87
9154 15648 2.166907 TTTTGCCTGGGGTTGAGAAA 57.833 45.000 0.00 0.00 0.00 2.52
9155 15649 2.166907 TTTGCCTGGGGTTGAGAAAA 57.833 45.000 0.00 0.00 0.00 2.29
9156 15650 2.397044 TTGCCTGGGGTTGAGAAAAT 57.603 45.000 0.00 0.00 0.00 1.82
9157 15651 3.534357 TTGCCTGGGGTTGAGAAAATA 57.466 42.857 0.00 0.00 0.00 1.40
9158 15652 3.756082 TGCCTGGGGTTGAGAAAATAT 57.244 42.857 0.00 0.00 0.00 1.28
9159 15653 3.631250 TGCCTGGGGTTGAGAAAATATC 58.369 45.455 0.00 0.00 0.00 1.63
9160 15654 2.959030 GCCTGGGGTTGAGAAAATATCC 59.041 50.000 0.00 0.00 0.00 2.59
9161 15655 3.627237 GCCTGGGGTTGAGAAAATATCCA 60.627 47.826 0.00 0.00 0.00 3.41
9162 15656 3.954258 CCTGGGGTTGAGAAAATATCCAC 59.046 47.826 0.00 0.00 0.00 4.02
9163 15657 4.325344 CCTGGGGTTGAGAAAATATCCACT 60.325 45.833 0.00 0.00 0.00 4.00
9164 15658 4.855340 TGGGGTTGAGAAAATATCCACTC 58.145 43.478 0.00 0.00 0.00 3.51
9165 15659 4.290985 TGGGGTTGAGAAAATATCCACTCA 59.709 41.667 0.00 0.00 37.56 3.41
9166 15660 5.044179 TGGGGTTGAGAAAATATCCACTCAT 60.044 40.000 0.00 0.00 38.79 2.90
9167 15661 5.893824 GGGGTTGAGAAAATATCCACTCATT 59.106 40.000 0.00 0.00 38.79 2.57
9168 15662 6.183360 GGGGTTGAGAAAATATCCACTCATTG 60.183 42.308 0.00 0.00 38.79 2.82
9169 15663 6.268566 GGTTGAGAAAATATCCACTCATTGC 58.731 40.000 0.00 0.00 38.79 3.56
9170 15664 6.268566 GTTGAGAAAATATCCACTCATTGCC 58.731 40.000 0.00 0.00 38.79 4.52
9171 15665 4.889409 TGAGAAAATATCCACTCATTGCCC 59.111 41.667 0.00 0.00 35.01 5.36
9172 15666 4.218312 AGAAAATATCCACTCATTGCCCC 58.782 43.478 0.00 0.00 0.00 5.80
9173 15667 2.683211 AATATCCACTCATTGCCCCC 57.317 50.000 0.00 0.00 0.00 5.40
9174 15668 1.838611 ATATCCACTCATTGCCCCCT 58.161 50.000 0.00 0.00 0.00 4.79
9175 15669 1.140312 TATCCACTCATTGCCCCCTC 58.860 55.000 0.00 0.00 0.00 4.30
9176 15670 0.920763 ATCCACTCATTGCCCCCTCA 60.921 55.000 0.00 0.00 0.00 3.86
9177 15671 1.379044 CCACTCATTGCCCCCTCAC 60.379 63.158 0.00 0.00 0.00 3.51
9178 15672 1.746615 CACTCATTGCCCCCTCACG 60.747 63.158 0.00 0.00 0.00 4.35
9179 15673 1.918293 ACTCATTGCCCCCTCACGA 60.918 57.895 0.00 0.00 0.00 4.35
9180 15674 1.299648 CTCATTGCCCCCTCACGAA 59.700 57.895 0.00 0.00 0.00 3.85
9181 15675 1.002624 TCATTGCCCCCTCACGAAC 60.003 57.895 0.00 0.00 0.00 3.95
9182 15676 2.046314 ATTGCCCCCTCACGAACG 60.046 61.111 0.00 0.00 0.00 3.95
9183 15677 2.890766 ATTGCCCCCTCACGAACGT 61.891 57.895 0.00 0.00 0.00 3.99
9184 15678 1.546589 ATTGCCCCCTCACGAACGTA 61.547 55.000 0.00 0.00 0.00 3.57
9185 15679 1.546589 TTGCCCCCTCACGAACGTAT 61.547 55.000 0.00 0.00 0.00 3.06
9186 15680 1.227176 GCCCCCTCACGAACGTATC 60.227 63.158 0.00 0.00 0.00 2.24
9187 15681 1.440476 CCCCCTCACGAACGTATCC 59.560 63.158 0.00 0.00 0.00 2.59
9188 15682 1.440476 CCCCTCACGAACGTATCCC 59.560 63.158 0.00 0.00 0.00 3.85
9189 15683 1.440476 CCCTCACGAACGTATCCCC 59.560 63.158 0.00 0.00 0.00 4.81
9190 15684 1.065273 CCTCACGAACGTATCCCCG 59.935 63.158 0.00 0.00 0.00 5.73
9191 15685 1.588139 CTCACGAACGTATCCCCGC 60.588 63.158 0.00 0.00 0.00 6.13
9192 15686 2.584143 CACGAACGTATCCCCGCC 60.584 66.667 0.00 0.00 0.00 6.13
9193 15687 3.069946 ACGAACGTATCCCCGCCA 61.070 61.111 0.00 0.00 0.00 5.69
9194 15688 2.584143 CGAACGTATCCCCGCCAC 60.584 66.667 0.00 0.00 0.00 5.01
9195 15689 2.202974 GAACGTATCCCCGCCACC 60.203 66.667 0.00 0.00 0.00 4.61
9196 15690 3.004354 AACGTATCCCCGCCACCA 61.004 61.111 0.00 0.00 0.00 4.17
9197 15691 3.319441 AACGTATCCCCGCCACCAC 62.319 63.158 0.00 0.00 0.00 4.16
9198 15692 4.540735 CGTATCCCCGCCACCACC 62.541 72.222 0.00 0.00 0.00 4.61
9199 15693 3.404438 GTATCCCCGCCACCACCA 61.404 66.667 0.00 0.00 0.00 4.17
9200 15694 3.404438 TATCCCCGCCACCACCAC 61.404 66.667 0.00 0.00 0.00 4.16
9208 15702 4.920112 CCACCACCACCACGCGAA 62.920 66.667 15.93 0.00 0.00 4.70
9209 15703 3.645975 CACCACCACCACGCGAAC 61.646 66.667 15.93 0.00 0.00 3.95
9210 15704 4.922026 ACCACCACCACGCGAACC 62.922 66.667 15.93 0.00 0.00 3.62
9260 15754 2.971660 GGTACCTCTGCTTCCTTCTC 57.028 55.000 4.06 0.00 0.00 2.87
9261 15755 2.462723 GGTACCTCTGCTTCCTTCTCT 58.537 52.381 4.06 0.00 0.00 3.10
9262 15756 2.835156 GGTACCTCTGCTTCCTTCTCTT 59.165 50.000 4.06 0.00 0.00 2.85
9263 15757 3.118920 GGTACCTCTGCTTCCTTCTCTTC 60.119 52.174 4.06 0.00 0.00 2.87
9264 15758 1.905894 ACCTCTGCTTCCTTCTCTTCC 59.094 52.381 0.00 0.00 0.00 3.46
9265 15759 2.187100 CCTCTGCTTCCTTCTCTTCCT 58.813 52.381 0.00 0.00 0.00 3.36
9266 15760 2.168313 CCTCTGCTTCCTTCTCTTCCTC 59.832 54.545 0.00 0.00 0.00 3.71
9267 15761 1.821753 TCTGCTTCCTTCTCTTCCTCG 59.178 52.381 0.00 0.00 0.00 4.63
9268 15762 1.821753 CTGCTTCCTTCTCTTCCTCGA 59.178 52.381 0.00 0.00 0.00 4.04
9269 15763 1.821753 TGCTTCCTTCTCTTCCTCGAG 59.178 52.381 5.13 5.13 0.00 4.04
9270 15764 1.470805 GCTTCCTTCTCTTCCTCGAGC 60.471 57.143 6.99 0.00 0.00 5.03
9271 15765 2.099405 CTTCCTTCTCTTCCTCGAGCT 58.901 52.381 6.99 0.00 0.00 4.09
9272 15766 1.757682 TCCTTCTCTTCCTCGAGCTC 58.242 55.000 6.99 2.73 0.00 4.09
9273 15767 0.744281 CCTTCTCTTCCTCGAGCTCC 59.256 60.000 6.99 0.00 0.00 4.70
9274 15768 0.744281 CTTCTCTTCCTCGAGCTCCC 59.256 60.000 6.99 0.00 0.00 4.30
9275 15769 0.333312 TTCTCTTCCTCGAGCTCCCT 59.667 55.000 6.99 0.00 0.00 4.20
9276 15770 0.333312 TCTCTTCCTCGAGCTCCCTT 59.667 55.000 6.99 0.00 0.00 3.95
9277 15771 0.744281 CTCTTCCTCGAGCTCCCTTC 59.256 60.000 6.99 0.00 0.00 3.46
9278 15772 0.333312 TCTTCCTCGAGCTCCCTTCT 59.667 55.000 6.99 0.00 0.00 2.85
9279 15773 1.564818 TCTTCCTCGAGCTCCCTTCTA 59.435 52.381 6.99 0.00 0.00 2.10
9280 15774 2.175931 TCTTCCTCGAGCTCCCTTCTAT 59.824 50.000 6.99 0.00 0.00 1.98
9281 15775 2.279935 TCCTCGAGCTCCCTTCTATC 57.720 55.000 6.99 0.00 0.00 2.08
9282 15776 1.777878 TCCTCGAGCTCCCTTCTATCT 59.222 52.381 6.99 0.00 0.00 1.98
9283 15777 2.159382 CCTCGAGCTCCCTTCTATCTC 58.841 57.143 6.99 0.00 0.00 2.75
9284 15778 2.159382 CTCGAGCTCCCTTCTATCTCC 58.841 57.143 8.47 0.00 0.00 3.71
9285 15779 0.878416 CGAGCTCCCTTCTATCTCCG 59.122 60.000 8.47 0.00 0.00 4.63
9286 15780 1.816183 CGAGCTCCCTTCTATCTCCGT 60.816 57.143 8.47 0.00 0.00 4.69
9287 15781 2.312390 GAGCTCCCTTCTATCTCCGTT 58.688 52.381 0.87 0.00 0.00 4.44
9288 15782 2.035321 GAGCTCCCTTCTATCTCCGTTG 59.965 54.545 0.87 0.00 0.00 4.10
9289 15783 1.539280 GCTCCCTTCTATCTCCGTTGC 60.539 57.143 0.00 0.00 0.00 4.17
9290 15784 0.744874 TCCCTTCTATCTCCGTTGCG 59.255 55.000 0.00 0.00 0.00 4.85
9291 15785 0.876342 CCCTTCTATCTCCGTTGCGC 60.876 60.000 0.00 0.00 0.00 6.09
9292 15786 0.876342 CCTTCTATCTCCGTTGCGCC 60.876 60.000 4.18 0.00 0.00 6.53
9293 15787 0.876342 CTTCTATCTCCGTTGCGCCC 60.876 60.000 4.18 0.00 0.00 6.13
9294 15788 2.622903 TTCTATCTCCGTTGCGCCCG 62.623 60.000 4.18 7.35 0.00 6.13
9295 15789 3.426117 CTATCTCCGTTGCGCCCGT 62.426 63.158 4.18 0.00 0.00 5.28
9296 15790 3.420214 TATCTCCGTTGCGCCCGTC 62.420 63.158 4.18 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 8.666573 TGATAGTACGTTTGTCTTTGTCAAAAA 58.333 29.630 0.00 0.00 36.71 1.94
15 16 8.199176 TGATAGTACGTTTGTCTTTGTCAAAA 57.801 30.769 0.00 0.00 36.71 2.44
16 17 7.517734 GCTGATAGTACGTTTGTCTTTGTCAAA 60.518 37.037 0.00 0.00 33.28 2.69
17 18 6.073980 GCTGATAGTACGTTTGTCTTTGTCAA 60.074 38.462 0.00 0.00 0.00 3.18
18 19 5.404366 GCTGATAGTACGTTTGTCTTTGTCA 59.596 40.000 0.00 0.00 0.00 3.58
19 20 5.634020 AGCTGATAGTACGTTTGTCTTTGTC 59.366 40.000 0.00 0.00 0.00 3.18
20 21 5.539048 AGCTGATAGTACGTTTGTCTTTGT 58.461 37.500 0.00 0.00 0.00 2.83
21 22 7.115805 TGTTAGCTGATAGTACGTTTGTCTTTG 59.884 37.037 0.00 0.00 0.00 2.77
22 23 7.149973 TGTTAGCTGATAGTACGTTTGTCTTT 58.850 34.615 0.00 0.00 0.00 2.52
23 24 6.684686 TGTTAGCTGATAGTACGTTTGTCTT 58.315 36.000 0.00 0.00 0.00 3.01
24 25 6.263516 TGTTAGCTGATAGTACGTTTGTCT 57.736 37.500 0.00 0.00 0.00 3.41
25 26 8.624701 TTATGTTAGCTGATAGTACGTTTGTC 57.375 34.615 0.00 0.00 0.00 3.18
26 27 8.991243 TTTATGTTAGCTGATAGTACGTTTGT 57.009 30.769 0.00 0.00 0.00 2.83
51 52 9.790389 TGTACGTCTCAAAATGTAAAATGTTTT 57.210 25.926 0.00 0.00 0.00 2.43
52 53 9.959749 ATGTACGTCTCAAAATGTAAAATGTTT 57.040 25.926 0.00 0.00 0.00 2.83
53 54 9.393249 CATGTACGTCTCAAAATGTAAAATGTT 57.607 29.630 0.00 0.00 0.00 2.71
54 55 8.564574 ACATGTACGTCTCAAAATGTAAAATGT 58.435 29.630 0.00 0.00 31.63 2.71
55 56 8.948853 ACATGTACGTCTCAAAATGTAAAATG 57.051 30.769 0.00 0.00 0.00 2.32
57 58 9.263538 ACTACATGTACGTCTCAAAATGTAAAA 57.736 29.630 0.08 0.00 31.97 1.52
58 59 8.821147 ACTACATGTACGTCTCAAAATGTAAA 57.179 30.769 0.08 0.00 31.97 2.01
59 60 8.821147 AACTACATGTACGTCTCAAAATGTAA 57.179 30.769 0.08 0.00 31.97 2.41
60 61 8.301720 AGAACTACATGTACGTCTCAAAATGTA 58.698 33.333 0.08 0.00 31.19 2.29
61 62 7.152645 AGAACTACATGTACGTCTCAAAATGT 58.847 34.615 0.08 0.00 33.18 2.71
62 63 7.201444 GGAGAACTACATGTACGTCTCAAAATG 60.201 40.741 27.10 9.75 0.00 2.32
63 64 6.812160 GGAGAACTACATGTACGTCTCAAAAT 59.188 38.462 27.10 7.73 0.00 1.82
64 65 6.154445 GGAGAACTACATGTACGTCTCAAAA 58.846 40.000 27.10 1.68 0.00 2.44
65 66 5.336213 GGGAGAACTACATGTACGTCTCAAA 60.336 44.000 27.10 2.29 0.00 2.69
66 67 4.157289 GGGAGAACTACATGTACGTCTCAA 59.843 45.833 27.10 2.88 0.00 3.02
67 68 3.693085 GGGAGAACTACATGTACGTCTCA 59.307 47.826 27.10 0.00 0.00 3.27
68 69 3.946558 AGGGAGAACTACATGTACGTCTC 59.053 47.826 22.26 22.26 0.00 3.36
69 70 3.946558 GAGGGAGAACTACATGTACGTCT 59.053 47.826 11.64 11.64 0.00 4.18
70 71 3.946558 AGAGGGAGAACTACATGTACGTC 59.053 47.826 0.08 2.33 0.00 4.34
71 72 3.695060 CAGAGGGAGAACTACATGTACGT 59.305 47.826 0.08 1.96 0.00 3.57
72 73 3.695060 ACAGAGGGAGAACTACATGTACG 59.305 47.826 0.08 1.31 0.00 3.67
73 74 6.770746 TTACAGAGGGAGAACTACATGTAC 57.229 41.667 0.08 0.00 0.00 2.90
74 75 7.179966 TCTTTACAGAGGGAGAACTACATGTA 58.820 38.462 5.25 5.25 0.00 2.29
75 76 6.017192 TCTTTACAGAGGGAGAACTACATGT 58.983 40.000 2.69 2.69 0.00 3.21
76 77 6.531503 TCTTTACAGAGGGAGAACTACATG 57.468 41.667 0.00 0.00 0.00 3.21
77 78 7.387643 GTTTCTTTACAGAGGGAGAACTACAT 58.612 38.462 0.00 0.00 0.00 2.29
78 79 6.516194 CGTTTCTTTACAGAGGGAGAACTACA 60.516 42.308 0.00 0.00 0.00 2.74
79 80 5.862860 CGTTTCTTTACAGAGGGAGAACTAC 59.137 44.000 0.00 0.00 0.00 2.73
80 81 5.566230 GCGTTTCTTTACAGAGGGAGAACTA 60.566 44.000 0.00 0.00 0.00 2.24
81 82 4.799917 GCGTTTCTTTACAGAGGGAGAACT 60.800 45.833 0.00 0.00 0.00 3.01
82 83 3.432592 GCGTTTCTTTACAGAGGGAGAAC 59.567 47.826 0.00 0.00 0.00 3.01
83 84 3.323979 AGCGTTTCTTTACAGAGGGAGAA 59.676 43.478 0.00 0.00 0.00 2.87
84 85 2.897969 AGCGTTTCTTTACAGAGGGAGA 59.102 45.455 0.00 0.00 0.00 3.71
85 86 3.320673 AGCGTTTCTTTACAGAGGGAG 57.679 47.619 0.00 0.00 0.00 4.30
86 87 3.764237 AAGCGTTTCTTTACAGAGGGA 57.236 42.857 0.00 0.00 0.00 4.20
87 88 4.830826 AAAAGCGTTTCTTTACAGAGGG 57.169 40.909 0.00 0.00 43.84 4.30
100 101 9.444600 TCCTCTGTAAAGAAATATAAAAGCGTT 57.555 29.630 0.00 0.00 0.00 4.84
101 102 9.444600 TTCCTCTGTAAAGAAATATAAAAGCGT 57.555 29.630 0.00 0.00 0.00 5.07
102 103 9.922305 CTTCCTCTGTAAAGAAATATAAAAGCG 57.078 33.333 0.00 0.00 0.00 4.68
145 146 4.014406 AAACCCTTGTTTGAGAACGAAGT 58.986 39.130 0.00 0.00 43.44 3.01
146 147 4.632538 AAACCCTTGTTTGAGAACGAAG 57.367 40.909 0.00 0.00 42.97 3.79
147 148 4.459685 TCAAAACCCTTGTTTGAGAACGAA 59.540 37.500 0.00 0.00 43.80 3.85
148 149 4.011023 TCAAAACCCTTGTTTGAGAACGA 58.989 39.130 0.00 0.00 43.80 3.85
149 150 4.102649 GTCAAAACCCTTGTTTGAGAACG 58.897 43.478 0.03 0.00 43.80 3.95
150 151 5.102313 CAGTCAAAACCCTTGTTTGAGAAC 58.898 41.667 0.03 0.00 43.80 3.01
169 170 0.035056 CCCCAACCTCATGTCCAGTC 60.035 60.000 0.00 0.00 0.00 3.51
170 171 0.772124 ACCCCAACCTCATGTCCAGT 60.772 55.000 0.00 0.00 0.00 4.00
171 172 0.405585 AACCCCAACCTCATGTCCAG 59.594 55.000 0.00 0.00 0.00 3.86
172 173 0.112218 CAACCCCAACCTCATGTCCA 59.888 55.000 0.00 0.00 0.00 4.02
176 177 1.984026 GGCCAACCCCAACCTCATG 60.984 63.158 0.00 0.00 0.00 3.07
177 178 2.155197 GAGGCCAACCCCAACCTCAT 62.155 60.000 5.01 0.00 46.57 2.90
180 181 3.966543 CGAGGCCAACCCCAACCT 61.967 66.667 5.01 0.00 36.11 3.50
414 417 0.107459 GCGGCTGGAAAGGAATCTCT 60.107 55.000 0.00 0.00 0.00 3.10
474 484 1.145819 GCCTGGACAGATCTCCTGC 59.854 63.158 0.00 0.00 46.81 4.85
523 533 5.239525 AGAAGTATCCAGGCGCAAATAATTC 59.760 40.000 10.83 14.55 31.98 2.17
550 560 4.442609 CGCAGCAACGAACAAGGAACTT 62.443 50.000 0.00 0.00 43.18 2.66
583 593 4.828939 TCTCAGAAAGTAACAAGGGTACGA 59.171 41.667 0.00 0.00 0.00 3.43
593 603 5.635700 AGATTCAAGCGTCTCAGAAAGTAAC 59.364 40.000 0.00 0.00 0.00 2.50
630 640 4.796606 AGATCAAATCGGGTCAAATCCAT 58.203 39.130 0.00 0.00 0.00 3.41
801 1172 1.367471 CAGTTCACAGACTCCCGCA 59.633 57.895 0.00 0.00 0.00 5.69
813 1184 1.339929 TGTGCTAAGAGCGACAGTTCA 59.660 47.619 0.00 0.00 46.26 3.18
854 1225 2.613026 AACACATGAACGTGAGGACA 57.387 45.000 0.00 0.00 39.34 4.02
934 1305 9.326413 AGAACCCGACTACTTCAAATATATTTG 57.674 33.333 25.89 25.89 46.39 2.32
937 1308 8.246430 TCAGAACCCGACTACTTCAAATATAT 57.754 34.615 0.00 0.00 0.00 0.86
938 1309 7.649533 TCAGAACCCGACTACTTCAAATATA 57.350 36.000 0.00 0.00 0.00 0.86
950 1321 2.990479 GGGCATCAGAACCCGACT 59.010 61.111 0.00 0.00 36.07 4.18
956 1327 0.615331 TCACCAGAGGGCATCAGAAC 59.385 55.000 0.58 0.00 37.90 3.01
963 1334 0.394762 GCAATCATCACCAGAGGGCA 60.395 55.000 0.00 0.00 37.90 5.36
964 1335 0.394762 TGCAATCATCACCAGAGGGC 60.395 55.000 0.00 0.00 37.90 5.19
989 1360 5.651530 TCTTCGAACTCATCTGGACAATAC 58.348 41.667 0.00 0.00 0.00 1.89
1223 1600 2.357034 TTTGACCCAGACGCGCTC 60.357 61.111 5.73 2.87 0.00 5.03
1229 1606 1.509703 GGACGAACTTTGACCCAGAC 58.490 55.000 0.00 0.00 0.00 3.51
1244 1621 1.440476 GATAACACCCCCTCGGACG 59.560 63.158 0.00 0.00 34.64 4.79
1422 1800 4.878971 TCATCGGCGAATGAATAAAAAGGA 59.121 37.500 15.93 0.00 32.80 3.36
1791 2174 2.797087 GCAGGTGCATTATGTGTCATGC 60.797 50.000 0.00 7.08 45.20 4.06
1947 2344 8.918202 ACTCTAAAAAGTCATGACCACATTAA 57.082 30.769 22.21 3.31 34.15 1.40
2188 2598 5.703730 ATTCCATGGCTTGAATTTTGGAT 57.296 34.783 6.96 0.00 33.53 3.41
2206 2616 5.556194 CGTTTGCTGCAACTAACAAAATTCC 60.556 40.000 15.72 0.00 34.10 3.01
2432 4917 6.789959 AGTCCAATTTATCCTACTATCAGGCT 59.210 38.462 0.00 0.00 35.49 4.58
2510 4995 8.959734 AATCATGTCAATCAAATATATGTGCG 57.040 30.769 0.00 0.00 0.00 5.34
2665 5152 3.576078 TGGGGTTATGGATAACAGCAG 57.424 47.619 10.85 0.00 43.33 4.24
2696 5184 3.811722 ATGCCGCATATCATTTGTACG 57.188 42.857 3.36 0.00 0.00 3.67
2774 5266 0.542702 AGGGTGGCACAAAAGATGGG 60.543 55.000 20.82 0.00 44.16 4.00
2990 5487 2.410730 ACGTTCTTGATTACGCCTTTCG 59.589 45.455 0.00 0.00 41.24 3.46
3018 5515 1.048601 ACGAAGGTGTCACCATGTCT 58.951 50.000 24.02 0.00 41.95 3.41
3034 5531 4.942761 ACTAAAACAGAACCTACCACGA 57.057 40.909 0.00 0.00 0.00 4.35
3070 5570 6.128634 CGTCTAATAGAACGAACCAAAAGCTT 60.129 38.462 0.00 0.00 0.00 3.74
3137 5638 2.240667 AGTCGCCTAACAGGGAGTAGTA 59.759 50.000 0.00 0.00 35.37 1.82
3139 5640 1.765230 AGTCGCCTAACAGGGAGTAG 58.235 55.000 0.00 0.00 35.37 2.57
3142 5643 2.054232 TCTAGTCGCCTAACAGGGAG 57.946 55.000 0.00 0.00 35.37 4.30
3195 6456 5.871539 TGGAAACGTGTTAGAAAAGTGTTC 58.128 37.500 0.00 0.00 0.00 3.18
3200 6461 6.114221 TCAACTGGAAACGTGTTAGAAAAG 57.886 37.500 0.00 0.00 0.00 2.27
3231 6492 7.361438 AGGGTAATGGGAATCAATCACAAATA 58.639 34.615 0.00 0.00 46.73 1.40
3252 6513 6.183361 ACAAACTACAAAGATTCTGAGAGGGT 60.183 38.462 0.00 0.00 0.00 4.34
3503 6883 5.920193 ACAGCATAAGGTTTACATTGCAT 57.080 34.783 0.00 0.00 32.66 3.96
3517 6898 5.692115 TTCTCATCCACCTAACAGCATAA 57.308 39.130 0.00 0.00 0.00 1.90
3929 7316 4.360951 ACGTAGGACTTTGGGATGAAAA 57.639 40.909 0.00 0.00 0.00 2.29
3983 7381 6.825721 AGGAAAACACCAAAAACATGCAAATA 59.174 30.769 0.00 0.00 0.00 1.40
4138 7540 9.019656 ACACAGCATAAGGACATTTGTAATAAA 57.980 29.630 0.00 0.00 0.00 1.40
4156 7558 1.993956 TTAAGGCCACAACACAGCAT 58.006 45.000 5.01 0.00 0.00 3.79
4481 7989 9.933723 CATTTTTCTCAGACTGGGATTATTTTT 57.066 29.630 5.70 0.00 0.00 1.94
4800 10853 6.007076 TGGGTCAGCAAAGTGAAATTACATA 58.993 36.000 0.00 0.00 0.00 2.29
4822 10877 4.335400 AAGCACCTGTTAAACCAAATGG 57.665 40.909 0.00 0.00 42.17 3.16
5336 11404 9.887406 GGAAAGAACATAAATTTCGTTGAACTA 57.113 29.630 9.88 0.00 34.47 2.24
5337 11405 7.589954 CGGAAAGAACATAAATTTCGTTGAACT 59.410 33.333 9.88 0.81 34.47 3.01
5338 11406 7.377662 ACGGAAAGAACATAAATTTCGTTGAAC 59.622 33.333 9.88 0.00 34.47 3.18
5339 11407 7.419204 ACGGAAAGAACATAAATTTCGTTGAA 58.581 30.769 9.88 0.00 34.47 2.69
5340 11408 6.961576 ACGGAAAGAACATAAATTTCGTTGA 58.038 32.000 9.88 0.00 34.47 3.18
5341 11409 8.013378 ACTACGGAAAGAACATAAATTTCGTTG 58.987 33.333 9.88 6.25 34.47 4.10
5342 11410 8.091385 ACTACGGAAAGAACATAAATTTCGTT 57.909 30.769 0.00 0.00 34.47 3.85
5343 11411 7.662604 ACTACGGAAAGAACATAAATTTCGT 57.337 32.000 0.00 0.00 34.47 3.85
5344 11412 9.632969 CATACTACGGAAAGAACATAAATTTCG 57.367 33.333 0.00 0.00 34.47 3.46
5347 11415 9.106070 GGACATACTACGGAAAGAACATAAATT 57.894 33.333 0.00 0.00 0.00 1.82
5348 11416 8.483758 AGGACATACTACGGAAAGAACATAAAT 58.516 33.333 0.00 0.00 0.00 1.40
5349 11417 7.762615 CAGGACATACTACGGAAAGAACATAAA 59.237 37.037 0.00 0.00 0.00 1.40
5350 11418 7.123098 TCAGGACATACTACGGAAAGAACATAA 59.877 37.037 0.00 0.00 0.00 1.90
5351 11419 6.604396 TCAGGACATACTACGGAAAGAACATA 59.396 38.462 0.00 0.00 0.00 2.29
5352 11420 5.421056 TCAGGACATACTACGGAAAGAACAT 59.579 40.000 0.00 0.00 0.00 2.71
5353 11421 4.768448 TCAGGACATACTACGGAAAGAACA 59.232 41.667 0.00 0.00 0.00 3.18
5354 11422 5.320549 TCAGGACATACTACGGAAAGAAC 57.679 43.478 0.00 0.00 0.00 3.01
5355 11423 5.655090 TGATCAGGACATACTACGGAAAGAA 59.345 40.000 0.00 0.00 0.00 2.52
5356 11424 5.198207 TGATCAGGACATACTACGGAAAGA 58.802 41.667 0.00 0.00 0.00 2.52
5357 11425 5.515797 TGATCAGGACATACTACGGAAAG 57.484 43.478 0.00 0.00 0.00 2.62
5358 11426 4.202121 GCTGATCAGGACATACTACGGAAA 60.202 45.833 23.89 0.00 0.00 3.13
5359 11427 3.318275 GCTGATCAGGACATACTACGGAA 59.682 47.826 23.89 0.00 0.00 4.30
5363 11431 5.269505 ACAAGCTGATCAGGACATACTAC 57.730 43.478 23.89 4.09 0.00 2.73
5409 11477 4.574599 ACAGTCTTTCAAGCCAAACATC 57.425 40.909 0.00 0.00 0.00 3.06
5428 11500 5.012664 ACACATGTGTCTGGTTCCTATAACA 59.987 40.000 25.76 0.00 40.24 2.41
5488 11560 6.669591 TCATATTGGTAGAGTGATCCCCATAG 59.330 42.308 0.00 0.00 0.00 2.23
5871 11966 1.133253 CAATGTGCGCTCCACTTCG 59.867 57.895 9.73 0.00 44.92 3.79
6571 12987 5.187772 AGCACTACTGTTATGAAGGATGTCA 59.812 40.000 0.00 0.00 0.00 3.58
6756 13172 9.220767 ACTATTAGTCAGAACATCAAAGGAAAC 57.779 33.333 0.00 0.00 0.00 2.78
7516 13956 4.746535 TGCCTGATCGGTACTAATTTCA 57.253 40.909 0.00 0.00 34.25 2.69
7759 14199 2.238395 GGCAACCTTCCTCTCAATCTCT 59.762 50.000 0.00 0.00 0.00 3.10
7789 14229 1.673168 AATCTGATTGAAGGCGCCTC 58.327 50.000 32.93 22.94 0.00 4.70
7839 14279 0.811616 CATACCAGAAGACCGCCTGC 60.812 60.000 0.00 0.00 0.00 4.85
7988 14428 9.410556 CCAGGATAACAAAAAGTTTGAGTTATG 57.589 33.333 21.36 13.42 41.64 1.90
8368 14836 2.514824 GGTTCGAGGAGCCCATGC 60.515 66.667 0.00 0.00 37.95 4.06
8379 14847 2.106857 ACCCCATTACAAACAGGTTCGA 59.893 45.455 0.00 0.00 0.00 3.71
8430 14898 7.724305 TGTTTGATAACACTACTTCTGTTCC 57.276 36.000 0.00 0.00 39.29 3.62
8489 14957 1.470805 CCGCAGTCCATGACGACAATA 60.471 52.381 0.00 0.00 37.67 1.90
8711 15203 0.971386 TGGGTAGAAACGTCTGGGTC 59.029 55.000 0.00 0.00 35.12 4.46
8712 15204 1.278127 CATGGGTAGAAACGTCTGGGT 59.722 52.381 0.00 0.00 35.12 4.51
8772 15266 2.548067 GGAGTAGCATCCAATACACCGG 60.548 54.545 0.00 0.00 39.34 5.28
8776 15270 2.972713 GGAGGGAGTAGCATCCAATACA 59.027 50.000 5.17 0.00 41.52 2.29
8777 15271 2.028930 CGGAGGGAGTAGCATCCAATAC 60.029 54.545 5.17 0.00 41.52 1.89
8790 15284 5.294552 GTCATCTATTTTGAAACGGAGGGAG 59.705 44.000 0.00 0.00 0.00 4.30
8791 15285 5.183228 GTCATCTATTTTGAAACGGAGGGA 58.817 41.667 0.00 0.00 0.00 4.20
8792 15286 4.335594 GGTCATCTATTTTGAAACGGAGGG 59.664 45.833 0.00 0.00 0.00 4.30
8793 15287 5.186198 AGGTCATCTATTTTGAAACGGAGG 58.814 41.667 0.00 0.00 0.00 4.30
8794 15288 7.549488 AGTTAGGTCATCTATTTTGAAACGGAG 59.451 37.037 0.00 0.00 0.00 4.63
8796 15290 7.611213 AGTTAGGTCATCTATTTTGAAACGG 57.389 36.000 0.00 0.00 0.00 4.44
8810 15304 9.939802 CCTTAAGTTAGTACAAAGTTAGGTCAT 57.060 33.333 0.97 0.00 0.00 3.06
8811 15305 7.874528 GCCTTAAGTTAGTACAAAGTTAGGTCA 59.125 37.037 0.97 0.00 0.00 4.02
8812 15306 7.062722 CGCCTTAAGTTAGTACAAAGTTAGGTC 59.937 40.741 0.97 0.00 0.00 3.85
8813 15307 6.870439 CGCCTTAAGTTAGTACAAAGTTAGGT 59.130 38.462 0.97 0.00 0.00 3.08
8814 15308 6.870439 ACGCCTTAAGTTAGTACAAAGTTAGG 59.130 38.462 0.97 0.00 0.00 2.69
8815 15309 7.148689 CCACGCCTTAAGTTAGTACAAAGTTAG 60.149 40.741 0.97 0.00 0.00 2.34
8816 15310 6.646240 CCACGCCTTAAGTTAGTACAAAGTTA 59.354 38.462 0.97 0.00 0.00 2.24
8817 15311 5.467735 CCACGCCTTAAGTTAGTACAAAGTT 59.532 40.000 0.97 0.00 0.00 2.66
8818 15312 4.992951 CCACGCCTTAAGTTAGTACAAAGT 59.007 41.667 0.97 0.00 0.00 2.66
8819 15313 4.142966 GCCACGCCTTAAGTTAGTACAAAG 60.143 45.833 0.97 0.00 0.00 2.77
8820 15314 3.747529 GCCACGCCTTAAGTTAGTACAAA 59.252 43.478 0.97 0.00 0.00 2.83
8821 15315 3.007182 AGCCACGCCTTAAGTTAGTACAA 59.993 43.478 0.97 0.00 0.00 2.41
8822 15316 2.564062 AGCCACGCCTTAAGTTAGTACA 59.436 45.455 0.97 0.00 0.00 2.90
8823 15317 3.242549 AGCCACGCCTTAAGTTAGTAC 57.757 47.619 0.97 0.00 0.00 2.73
8824 15318 4.272489 TCTAGCCACGCCTTAAGTTAGTA 58.728 43.478 0.97 0.00 0.00 1.82
8825 15319 3.094572 TCTAGCCACGCCTTAAGTTAGT 58.905 45.455 0.97 0.00 0.00 2.24
8826 15320 3.491104 CCTCTAGCCACGCCTTAAGTTAG 60.491 52.174 0.97 0.00 0.00 2.34
8827 15321 2.429610 CCTCTAGCCACGCCTTAAGTTA 59.570 50.000 0.97 0.00 0.00 2.24
8828 15322 1.207329 CCTCTAGCCACGCCTTAAGTT 59.793 52.381 0.97 0.00 0.00 2.66
8829 15323 0.824759 CCTCTAGCCACGCCTTAAGT 59.175 55.000 0.97 0.00 0.00 2.24
8830 15324 0.105039 CCCTCTAGCCACGCCTTAAG 59.895 60.000 0.00 0.00 0.00 1.85
8831 15325 0.324923 TCCCTCTAGCCACGCCTTAA 60.325 55.000 0.00 0.00 0.00 1.85
8832 15326 1.041447 GTCCCTCTAGCCACGCCTTA 61.041 60.000 0.00 0.00 0.00 2.69
8833 15327 2.038975 TCCCTCTAGCCACGCCTT 59.961 61.111 0.00 0.00 0.00 4.35
8834 15328 2.760385 GTCCCTCTAGCCACGCCT 60.760 66.667 0.00 0.00 0.00 5.52
8835 15329 4.208686 CGTCCCTCTAGCCACGCC 62.209 72.222 0.00 0.00 0.00 5.68
8837 15331 4.554363 CGCGTCCCTCTAGCCACG 62.554 72.222 0.00 0.00 35.32 4.94
8850 15344 2.355126 CTAGATGCATCCGCGCGT 60.355 61.111 29.95 8.89 42.97 6.01
8878 15372 4.207891 TCTTAGACCATGCCTTTGTCTC 57.792 45.455 5.02 0.00 39.84 3.36
8879 15373 4.018960 ACATCTTAGACCATGCCTTTGTCT 60.019 41.667 6.76 6.76 41.88 3.41
8880 15374 4.095483 CACATCTTAGACCATGCCTTTGTC 59.905 45.833 0.00 0.00 0.00 3.18
8881 15375 4.012374 CACATCTTAGACCATGCCTTTGT 58.988 43.478 0.00 0.00 0.00 2.83
8882 15376 3.379372 CCACATCTTAGACCATGCCTTTG 59.621 47.826 0.00 0.00 0.00 2.77
8885 15379 2.481441 TCCACATCTTAGACCATGCCT 58.519 47.619 0.00 0.00 0.00 4.75
8887 15381 4.458989 TGTTTTCCACATCTTAGACCATGC 59.541 41.667 0.00 0.00 0.00 4.06
8888 15382 5.939883 TCTGTTTTCCACATCTTAGACCATG 59.060 40.000 0.00 0.00 33.76 3.66
8889 15383 6.126863 TCTGTTTTCCACATCTTAGACCAT 57.873 37.500 0.00 0.00 33.76 3.55
8890 15384 5.560722 TCTGTTTTCCACATCTTAGACCA 57.439 39.130 0.00 0.00 33.76 4.02
8891 15385 5.940470 ACATCTGTTTTCCACATCTTAGACC 59.060 40.000 0.00 0.00 33.76 3.85
8892 15386 6.621596 GCACATCTGTTTTCCACATCTTAGAC 60.622 42.308 0.00 0.00 33.76 2.59
8893 15387 5.412594 GCACATCTGTTTTCCACATCTTAGA 59.587 40.000 0.00 0.00 33.76 2.10
8894 15388 5.413833 AGCACATCTGTTTTCCACATCTTAG 59.586 40.000 0.00 0.00 33.76 2.18
8895 15389 5.316167 AGCACATCTGTTTTCCACATCTTA 58.684 37.500 0.00 0.00 33.76 2.10
8896 15390 4.147321 AGCACATCTGTTTTCCACATCTT 58.853 39.130 0.00 0.00 33.76 2.40
8897 15391 3.759581 AGCACATCTGTTTTCCACATCT 58.240 40.909 0.00 0.00 33.76 2.90
8898 15392 4.232221 CAAGCACATCTGTTTTCCACATC 58.768 43.478 0.00 0.00 33.76 3.06
8899 15393 3.638160 ACAAGCACATCTGTTTTCCACAT 59.362 39.130 0.00 0.00 33.76 3.21
8900 15394 3.023119 ACAAGCACATCTGTTTTCCACA 58.977 40.909 0.00 0.00 0.00 4.17
8901 15395 3.715628 ACAAGCACATCTGTTTTCCAC 57.284 42.857 0.00 0.00 0.00 4.02
8902 15396 5.221224 CCTTAACAAGCACATCTGTTTTCCA 60.221 40.000 0.00 0.00 0.00 3.53
8903 15397 5.221244 ACCTTAACAAGCACATCTGTTTTCC 60.221 40.000 0.00 0.00 0.00 3.13
8904 15398 5.831997 ACCTTAACAAGCACATCTGTTTTC 58.168 37.500 0.00 0.00 0.00 2.29
8905 15399 5.359576 TGACCTTAACAAGCACATCTGTTTT 59.640 36.000 0.00 0.00 0.00 2.43
8906 15400 4.887071 TGACCTTAACAAGCACATCTGTTT 59.113 37.500 0.00 0.00 0.00 2.83
8907 15401 4.460263 TGACCTTAACAAGCACATCTGTT 58.540 39.130 0.00 0.00 0.00 3.16
8908 15402 4.085357 TGACCTTAACAAGCACATCTGT 57.915 40.909 0.00 0.00 0.00 3.41
8909 15403 5.437289 TTTGACCTTAACAAGCACATCTG 57.563 39.130 0.00 0.00 0.00 2.90
8910 15404 6.655078 ATTTTGACCTTAACAAGCACATCT 57.345 33.333 0.00 0.00 0.00 2.90
8911 15405 7.713764 AAATTTTGACCTTAACAAGCACATC 57.286 32.000 0.00 0.00 0.00 3.06
8912 15406 7.226523 GGAAAATTTTGACCTTAACAAGCACAT 59.773 33.333 8.47 0.00 0.00 3.21
8913 15407 6.536941 GGAAAATTTTGACCTTAACAAGCACA 59.463 34.615 8.47 0.00 0.00 4.57
8914 15408 6.761242 AGGAAAATTTTGACCTTAACAAGCAC 59.239 34.615 8.47 0.00 0.00 4.40
8915 15409 6.883744 AGGAAAATTTTGACCTTAACAAGCA 58.116 32.000 8.47 0.00 0.00 3.91
8916 15410 7.114388 CGTAGGAAAATTTTGACCTTAACAAGC 59.886 37.037 14.48 0.00 34.42 4.01
8917 15411 8.502161 CGTAGGAAAATTTTGACCTTAACAAG 57.498 34.615 14.48 0.00 34.42 3.16
8938 15432 1.103803 TGCTGAGCTAACCTCCGTAG 58.896 55.000 5.83 0.00 39.98 3.51
8939 15433 1.552578 TTGCTGAGCTAACCTCCGTA 58.447 50.000 5.83 0.00 39.98 4.02
8940 15434 0.905357 ATTGCTGAGCTAACCTCCGT 59.095 50.000 5.83 0.00 39.98 4.69
8974 15468 2.948315 TGTTGTGATGTTGCAGCAAGTA 59.052 40.909 8.49 0.73 29.49 2.24
9004 15498 4.440758 CCGCACAATCTACAAACACTTTTG 59.559 41.667 0.00 0.00 46.61 2.44
9005 15499 4.336993 TCCGCACAATCTACAAACACTTTT 59.663 37.500 0.00 0.00 0.00 2.27
9006 15500 3.880490 TCCGCACAATCTACAAACACTTT 59.120 39.130 0.00 0.00 0.00 2.66
9007 15501 3.472652 TCCGCACAATCTACAAACACTT 58.527 40.909 0.00 0.00 0.00 3.16
9008 15502 3.120321 TCCGCACAATCTACAAACACT 57.880 42.857 0.00 0.00 0.00 3.55
9009 15503 3.435327 TGATCCGCACAATCTACAAACAC 59.565 43.478 0.00 0.00 0.00 3.32
9010 15504 3.669536 TGATCCGCACAATCTACAAACA 58.330 40.909 0.00 0.00 0.00 2.83
9011 15505 3.932710 TCTGATCCGCACAATCTACAAAC 59.067 43.478 0.00 0.00 0.00 2.93
9012 15506 4.200838 TCTGATCCGCACAATCTACAAA 57.799 40.909 0.00 0.00 0.00 2.83
9013 15507 3.885724 TCTGATCCGCACAATCTACAA 57.114 42.857 0.00 0.00 0.00 2.41
9014 15508 5.069119 AGTTATCTGATCCGCACAATCTACA 59.931 40.000 0.00 0.00 0.00 2.74
9015 15509 5.533482 AGTTATCTGATCCGCACAATCTAC 58.467 41.667 0.00 0.00 0.00 2.59
9016 15510 5.301805 TGAGTTATCTGATCCGCACAATCTA 59.698 40.000 0.00 0.00 0.00 1.98
9017 15511 4.100035 TGAGTTATCTGATCCGCACAATCT 59.900 41.667 0.00 0.00 0.00 2.40
9018 15512 4.371786 TGAGTTATCTGATCCGCACAATC 58.628 43.478 0.00 0.00 0.00 2.67
9019 15513 4.406648 TGAGTTATCTGATCCGCACAAT 57.593 40.909 0.00 0.00 0.00 2.71
9020 15514 3.885724 TGAGTTATCTGATCCGCACAA 57.114 42.857 0.00 0.00 0.00 3.33
9021 15515 3.493176 CCATGAGTTATCTGATCCGCACA 60.493 47.826 0.00 0.00 0.00 4.57
9022 15516 3.062763 CCATGAGTTATCTGATCCGCAC 58.937 50.000 0.00 0.00 0.00 5.34
9023 15517 2.548707 GCCATGAGTTATCTGATCCGCA 60.549 50.000 0.00 0.00 0.00 5.69
9024 15518 2.072298 GCCATGAGTTATCTGATCCGC 58.928 52.381 0.00 0.00 0.00 5.54
9025 15519 2.288457 ACGCCATGAGTTATCTGATCCG 60.288 50.000 0.00 0.00 0.00 4.18
9026 15520 3.243873 TGACGCCATGAGTTATCTGATCC 60.244 47.826 0.00 0.00 0.00 3.36
9027 15521 3.982475 TGACGCCATGAGTTATCTGATC 58.018 45.455 0.00 0.00 0.00 2.92
9028 15522 4.613925 ATGACGCCATGAGTTATCTGAT 57.386 40.909 0.00 0.00 0.00 2.90
9029 15523 4.100035 AGAATGACGCCATGAGTTATCTGA 59.900 41.667 0.00 0.00 32.36 3.27
9030 15524 4.375272 AGAATGACGCCATGAGTTATCTG 58.625 43.478 0.00 0.00 32.36 2.90
9031 15525 4.343526 AGAGAATGACGCCATGAGTTATCT 59.656 41.667 0.00 0.00 32.36 1.98
9032 15526 4.447054 CAGAGAATGACGCCATGAGTTATC 59.553 45.833 0.00 0.00 32.36 1.75
9033 15527 4.375272 CAGAGAATGACGCCATGAGTTAT 58.625 43.478 0.00 0.00 32.36 1.89
9034 15528 3.785486 CAGAGAATGACGCCATGAGTTA 58.215 45.455 0.00 0.00 32.36 2.24
9035 15529 2.625737 CAGAGAATGACGCCATGAGTT 58.374 47.619 0.00 0.00 32.36 3.01
9036 15530 1.741732 GCAGAGAATGACGCCATGAGT 60.742 52.381 0.00 0.00 32.36 3.41
9037 15531 0.935898 GCAGAGAATGACGCCATGAG 59.064 55.000 0.00 0.00 32.36 2.90
9038 15532 0.538584 AGCAGAGAATGACGCCATGA 59.461 50.000 0.00 0.00 32.36 3.07
9039 15533 0.935898 GAGCAGAGAATGACGCCATG 59.064 55.000 0.00 0.00 32.36 3.66
9040 15534 0.529337 CGAGCAGAGAATGACGCCAT 60.529 55.000 0.00 0.00 33.66 4.40
9041 15535 1.153765 CGAGCAGAGAATGACGCCA 60.154 57.895 0.00 0.00 0.00 5.69
9042 15536 0.458543 TTCGAGCAGAGAATGACGCC 60.459 55.000 0.00 0.00 32.81 5.68
9043 15537 1.565305 ATTCGAGCAGAGAATGACGC 58.435 50.000 1.39 0.00 37.00 5.19
9044 15538 6.374578 TCTTATATTCGAGCAGAGAATGACG 58.625 40.000 10.33 0.00 38.61 4.35
9045 15539 7.795431 CTCTTATATTCGAGCAGAGAATGAC 57.205 40.000 10.33 0.00 38.61 3.06
9056 15550 6.308524 CAGCTGAAGATGCTCTTATATTCGAG 59.691 42.308 8.42 0.00 36.73 4.04
9057 15551 6.155136 CAGCTGAAGATGCTCTTATATTCGA 58.845 40.000 8.42 0.00 36.73 3.71
9058 15552 5.925397 ACAGCTGAAGATGCTCTTATATTCG 59.075 40.000 23.35 0.00 36.73 3.34
9059 15553 7.440556 TCAACAGCTGAAGATGCTCTTATATTC 59.559 37.037 23.35 0.00 36.73 1.75
9060 15554 7.278135 TCAACAGCTGAAGATGCTCTTATATT 58.722 34.615 23.35 0.00 36.73 1.28
9061 15555 6.824553 TCAACAGCTGAAGATGCTCTTATAT 58.175 36.000 23.35 0.00 36.73 0.86
9062 15556 6.225981 TCAACAGCTGAAGATGCTCTTATA 57.774 37.500 23.35 0.00 36.73 0.98
9063 15557 5.095145 TCAACAGCTGAAGATGCTCTTAT 57.905 39.130 23.35 0.00 36.73 1.73
9064 15558 4.502016 CTCAACAGCTGAAGATGCTCTTA 58.498 43.478 23.35 0.00 36.73 2.10
9065 15559 3.336468 CTCAACAGCTGAAGATGCTCTT 58.664 45.455 23.35 0.00 39.87 2.85
9066 15560 2.936114 GCTCAACAGCTGAAGATGCTCT 60.936 50.000 23.35 0.00 43.09 4.09
9067 15561 1.397692 GCTCAACAGCTGAAGATGCTC 59.602 52.381 23.35 5.23 43.09 4.26
9068 15562 1.451067 GCTCAACAGCTGAAGATGCT 58.549 50.000 23.35 0.00 43.09 3.79
9069 15563 0.450983 GGCTCAACAGCTGAAGATGC 59.549 55.000 23.35 19.11 46.03 3.91
9070 15564 1.093159 GGGCTCAACAGCTGAAGATG 58.907 55.000 23.35 13.32 46.03 2.90
9071 15565 0.034670 GGGGCTCAACAGCTGAAGAT 60.035 55.000 23.35 0.00 46.03 2.40
9072 15566 1.130054 AGGGGCTCAACAGCTGAAGA 61.130 55.000 23.35 16.05 46.03 2.87
9073 15567 0.615331 TAGGGGCTCAACAGCTGAAG 59.385 55.000 23.35 15.17 46.03 3.02
9074 15568 0.615331 CTAGGGGCTCAACAGCTGAA 59.385 55.000 23.35 4.30 46.03 3.02
9075 15569 1.267574 CCTAGGGGCTCAACAGCTGA 61.268 60.000 23.35 0.00 46.03 4.26
9076 15570 1.222936 CCTAGGGGCTCAACAGCTG 59.777 63.158 13.48 13.48 46.03 4.24
9077 15571 0.980231 CTCCTAGGGGCTCAACAGCT 60.980 60.000 9.46 0.00 46.03 4.24
9078 15572 1.524482 CTCCTAGGGGCTCAACAGC 59.476 63.158 9.46 0.00 46.06 4.40
9079 15573 1.977293 GCCTCCTAGGGGCTCAACAG 61.977 65.000 25.84 8.14 45.57 3.16
9080 15574 1.995626 GCCTCCTAGGGGCTCAACA 60.996 63.158 25.84 0.00 45.57 3.33
9081 15575 2.911928 GCCTCCTAGGGGCTCAAC 59.088 66.667 25.84 5.04 45.57 3.18
9117 15611 2.171209 AAAAATTCGCCAGCAGCCCC 62.171 55.000 0.00 0.00 38.78 5.80
9118 15612 1.293179 AAAAATTCGCCAGCAGCCC 59.707 52.632 0.00 0.00 38.78 5.19
9119 15613 4.994744 AAAAATTCGCCAGCAGCC 57.005 50.000 0.00 0.00 38.78 4.85
9134 15628 2.166907 TTCTCAACCCCAGGCAAAAA 57.833 45.000 0.00 0.00 0.00 1.94
9135 15629 2.166907 TTTCTCAACCCCAGGCAAAA 57.833 45.000 0.00 0.00 0.00 2.44
9136 15630 2.166907 TTTTCTCAACCCCAGGCAAA 57.833 45.000 0.00 0.00 0.00 3.68
9137 15631 2.397044 ATTTTCTCAACCCCAGGCAA 57.603 45.000 0.00 0.00 0.00 4.52
9138 15632 3.627237 GGATATTTTCTCAACCCCAGGCA 60.627 47.826 0.00 0.00 0.00 4.75
9139 15633 2.959030 GGATATTTTCTCAACCCCAGGC 59.041 50.000 0.00 0.00 0.00 4.85
9140 15634 3.954258 GTGGATATTTTCTCAACCCCAGG 59.046 47.826 0.00 0.00 0.00 4.45
9141 15635 4.860022 AGTGGATATTTTCTCAACCCCAG 58.140 43.478 0.00 0.00 0.00 4.45
9142 15636 4.290985 TGAGTGGATATTTTCTCAACCCCA 59.709 41.667 0.00 0.00 34.61 4.96
9143 15637 4.855340 TGAGTGGATATTTTCTCAACCCC 58.145 43.478 0.00 0.00 34.61 4.95
9144 15638 6.681368 GCAATGAGTGGATATTTTCTCAACCC 60.681 42.308 8.12 0.00 39.75 4.11
9145 15639 6.268566 GCAATGAGTGGATATTTTCTCAACC 58.731 40.000 8.12 0.00 39.75 3.77
9146 15640 6.268566 GGCAATGAGTGGATATTTTCTCAAC 58.731 40.000 8.12 3.47 39.75 3.18
9147 15641 5.360714 GGGCAATGAGTGGATATTTTCTCAA 59.639 40.000 8.12 0.00 39.75 3.02
9148 15642 4.889409 GGGCAATGAGTGGATATTTTCTCA 59.111 41.667 0.00 0.00 40.43 3.27
9149 15643 4.279420 GGGGCAATGAGTGGATATTTTCTC 59.721 45.833 0.00 0.00 0.00 2.87
9150 15644 4.218312 GGGGCAATGAGTGGATATTTTCT 58.782 43.478 0.00 0.00 0.00 2.52
9151 15645 3.321968 GGGGGCAATGAGTGGATATTTTC 59.678 47.826 0.00 0.00 0.00 2.29
9152 15646 3.051880 AGGGGGCAATGAGTGGATATTTT 60.052 43.478 0.00 0.00 0.00 1.82
9153 15647 2.519691 AGGGGGCAATGAGTGGATATTT 59.480 45.455 0.00 0.00 0.00 1.40
9154 15648 2.108952 GAGGGGGCAATGAGTGGATATT 59.891 50.000 0.00 0.00 0.00 1.28
9155 15649 1.707427 GAGGGGGCAATGAGTGGATAT 59.293 52.381 0.00 0.00 0.00 1.63
9156 15650 1.140312 GAGGGGGCAATGAGTGGATA 58.860 55.000 0.00 0.00 0.00 2.59
9157 15651 0.920763 TGAGGGGGCAATGAGTGGAT 60.921 55.000 0.00 0.00 0.00 3.41
9158 15652 1.541118 TGAGGGGGCAATGAGTGGA 60.541 57.895 0.00 0.00 0.00 4.02
9159 15653 1.379044 GTGAGGGGGCAATGAGTGG 60.379 63.158 0.00 0.00 0.00 4.00
9160 15654 1.746615 CGTGAGGGGGCAATGAGTG 60.747 63.158 0.00 0.00 0.00 3.51
9161 15655 1.488705 TTCGTGAGGGGGCAATGAGT 61.489 55.000 0.00 0.00 0.00 3.41
9162 15656 1.026718 GTTCGTGAGGGGGCAATGAG 61.027 60.000 0.00 0.00 0.00 2.90
9163 15657 1.002624 GTTCGTGAGGGGGCAATGA 60.003 57.895 0.00 0.00 0.00 2.57
9164 15658 2.398554 CGTTCGTGAGGGGGCAATG 61.399 63.158 0.00 0.00 0.00 2.82
9165 15659 1.546589 TACGTTCGTGAGGGGGCAAT 61.547 55.000 8.14 0.00 0.00 3.56
9166 15660 1.546589 ATACGTTCGTGAGGGGGCAA 61.547 55.000 8.14 0.00 0.00 4.52
9167 15661 1.952102 GATACGTTCGTGAGGGGGCA 61.952 60.000 8.14 0.00 0.00 5.36
9168 15662 1.227176 GATACGTTCGTGAGGGGGC 60.227 63.158 8.14 0.00 0.00 5.80
9169 15663 1.440476 GGATACGTTCGTGAGGGGG 59.560 63.158 8.14 0.00 0.00 5.40
9170 15664 1.440476 GGGATACGTTCGTGAGGGG 59.560 63.158 8.14 0.00 37.60 4.79
9171 15665 1.440476 GGGGATACGTTCGTGAGGG 59.560 63.158 8.14 0.00 37.60 4.30
9172 15666 1.065273 CGGGGATACGTTCGTGAGG 59.935 63.158 8.14 0.00 37.60 3.86
9173 15667 1.588139 GCGGGGATACGTTCGTGAG 60.588 63.158 8.14 0.00 35.98 3.51
9174 15668 2.491152 GCGGGGATACGTTCGTGA 59.509 61.111 8.14 0.00 35.98 4.35
9175 15669 2.584143 GGCGGGGATACGTTCGTG 60.584 66.667 8.14 0.00 35.98 4.35
9176 15670 3.069946 TGGCGGGGATACGTTCGT 61.070 61.111 0.00 2.91 35.98 3.85
9177 15671 2.584143 GTGGCGGGGATACGTTCG 60.584 66.667 0.00 0.00 35.98 3.95
9178 15672 2.202974 GGTGGCGGGGATACGTTC 60.203 66.667 0.00 0.00 35.98 3.95
9179 15673 3.004354 TGGTGGCGGGGATACGTT 61.004 61.111 0.00 0.00 35.98 3.99
9180 15674 3.777910 GTGGTGGCGGGGATACGT 61.778 66.667 0.00 0.00 35.98 3.57
9181 15675 4.540735 GGTGGTGGCGGGGATACG 62.541 72.222 0.00 0.00 37.60 3.06
9182 15676 3.404438 TGGTGGTGGCGGGGATAC 61.404 66.667 0.00 0.00 0.00 2.24
9183 15677 3.404438 GTGGTGGTGGCGGGGATA 61.404 66.667 0.00 0.00 0.00 2.59
9191 15685 4.920112 TTCGCGTGGTGGTGGTGG 62.920 66.667 5.77 0.00 0.00 4.61
9192 15686 3.645975 GTTCGCGTGGTGGTGGTG 61.646 66.667 5.77 0.00 0.00 4.17
9193 15687 4.922026 GGTTCGCGTGGTGGTGGT 62.922 66.667 5.77 0.00 0.00 4.16
9236 15730 3.387225 GAAGCAGAGGTACCCCGCC 62.387 68.421 8.74 0.00 35.12 6.13
9237 15731 2.187163 GAAGCAGAGGTACCCCGC 59.813 66.667 8.74 9.05 35.12 6.13
9238 15732 1.265454 AAGGAAGCAGAGGTACCCCG 61.265 60.000 8.74 0.00 35.12 5.73
9239 15733 0.542333 GAAGGAAGCAGAGGTACCCC 59.458 60.000 8.74 0.00 0.00 4.95
9240 15734 1.483004 GAGAAGGAAGCAGAGGTACCC 59.517 57.143 8.74 0.00 0.00 3.69
9241 15735 2.462723 AGAGAAGGAAGCAGAGGTACC 58.537 52.381 2.73 2.73 0.00 3.34
9242 15736 3.118920 GGAAGAGAAGGAAGCAGAGGTAC 60.119 52.174 0.00 0.00 0.00 3.34
9243 15737 3.100671 GGAAGAGAAGGAAGCAGAGGTA 58.899 50.000 0.00 0.00 0.00 3.08
9244 15738 1.905894 GGAAGAGAAGGAAGCAGAGGT 59.094 52.381 0.00 0.00 0.00 3.85
9245 15739 2.168313 GAGGAAGAGAAGGAAGCAGAGG 59.832 54.545 0.00 0.00 0.00 3.69
9246 15740 2.159254 CGAGGAAGAGAAGGAAGCAGAG 60.159 54.545 0.00 0.00 0.00 3.35
9247 15741 1.821753 CGAGGAAGAGAAGGAAGCAGA 59.178 52.381 0.00 0.00 0.00 4.26
9248 15742 1.821753 TCGAGGAAGAGAAGGAAGCAG 59.178 52.381 0.00 0.00 0.00 4.24
9249 15743 1.821753 CTCGAGGAAGAGAAGGAAGCA 59.178 52.381 3.91 0.00 40.57 3.91
9250 15744 1.470805 GCTCGAGGAAGAGAAGGAAGC 60.471 57.143 15.58 0.00 40.57 3.86
9251 15745 2.099098 GAGCTCGAGGAAGAGAAGGAAG 59.901 54.545 15.58 0.00 40.57 3.46
9252 15746 2.096248 GAGCTCGAGGAAGAGAAGGAA 58.904 52.381 15.58 0.00 40.57 3.36
9253 15747 1.683629 GGAGCTCGAGGAAGAGAAGGA 60.684 57.143 15.58 0.00 40.57 3.36
9254 15748 0.744281 GGAGCTCGAGGAAGAGAAGG 59.256 60.000 15.58 0.00 40.57 3.46
9255 15749 0.744281 GGGAGCTCGAGGAAGAGAAG 59.256 60.000 15.58 0.00 40.57 2.85
9256 15750 0.333312 AGGGAGCTCGAGGAAGAGAA 59.667 55.000 15.58 0.00 40.57 2.87
9257 15751 0.333312 AAGGGAGCTCGAGGAAGAGA 59.667 55.000 15.58 0.00 40.57 3.10
9258 15752 0.744281 GAAGGGAGCTCGAGGAAGAG 59.256 60.000 15.58 0.00 41.03 2.85
9259 15753 0.333312 AGAAGGGAGCTCGAGGAAGA 59.667 55.000 15.58 0.00 0.00 2.87
9260 15754 2.060050 TAGAAGGGAGCTCGAGGAAG 57.940 55.000 15.58 0.00 0.00 3.46
9261 15755 2.175931 AGATAGAAGGGAGCTCGAGGAA 59.824 50.000 15.58 0.00 0.00 3.36
9262 15756 1.777878 AGATAGAAGGGAGCTCGAGGA 59.222 52.381 15.58 0.00 0.00 3.71
9263 15757 2.159382 GAGATAGAAGGGAGCTCGAGG 58.841 57.143 15.58 0.00 0.00 4.63
9264 15758 2.159382 GGAGATAGAAGGGAGCTCGAG 58.841 57.143 8.45 8.45 29.85 4.04
9265 15759 1.543650 CGGAGATAGAAGGGAGCTCGA 60.544 57.143 7.83 0.00 29.85 4.04
9266 15760 0.878416 CGGAGATAGAAGGGAGCTCG 59.122 60.000 7.83 0.00 29.85 5.03
9267 15761 1.989706 ACGGAGATAGAAGGGAGCTC 58.010 55.000 4.71 4.71 0.00 4.09
9268 15762 2.035632 CAACGGAGATAGAAGGGAGCT 58.964 52.381 0.00 0.00 0.00 4.09
9269 15763 1.539280 GCAACGGAGATAGAAGGGAGC 60.539 57.143 0.00 0.00 0.00 4.70
9270 15764 1.269309 CGCAACGGAGATAGAAGGGAG 60.269 57.143 0.00 0.00 0.00 4.30
9271 15765 0.744874 CGCAACGGAGATAGAAGGGA 59.255 55.000 0.00 0.00 0.00 4.20
9272 15766 0.876342 GCGCAACGGAGATAGAAGGG 60.876 60.000 0.30 0.00 0.00 3.95
9273 15767 0.876342 GGCGCAACGGAGATAGAAGG 60.876 60.000 10.83 0.00 0.00 3.46
9274 15768 0.876342 GGGCGCAACGGAGATAGAAG 60.876 60.000 10.83 0.00 0.00 2.85
9275 15769 1.143183 GGGCGCAACGGAGATAGAA 59.857 57.895 10.83 0.00 0.00 2.10
9276 15770 2.812499 GGGCGCAACGGAGATAGA 59.188 61.111 10.83 0.00 0.00 1.98
9277 15771 2.658593 CGGGCGCAACGGAGATAG 60.659 66.667 10.83 0.00 0.00 2.08
9278 15772 3.420214 GACGGGCGCAACGGAGATA 62.420 63.158 24.09 0.00 35.23 1.98
9279 15773 4.814294 GACGGGCGCAACGGAGAT 62.814 66.667 24.09 6.50 35.23 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.