Multiple sequence alignment - TraesCS6D01G136000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G136000 chr6D 100.000 4747 0 0 1 4747 104153429 104148683 0.000000e+00 8767.0
1 TraesCS6D01G136000 chr6D 100.000 42 0 0 4470 4511 104148918 104148877 1.420000e-10 78.7
2 TraesCS6D01G136000 chr6D 100.000 42 0 0 4512 4553 104148960 104148919 1.420000e-10 78.7
3 TraesCS6D01G136000 chr6B 93.079 2355 92 35 1 2339 189300497 189298198 0.000000e+00 3380.0
4 TraesCS6D01G136000 chr6B 95.103 878 38 4 3199 4074 189297069 189296195 0.000000e+00 1378.0
5 TraesCS6D01G136000 chr6B 94.810 790 39 2 2408 3197 189297983 189297196 0.000000e+00 1230.0
6 TraesCS6D01G136000 chr6B 88.448 277 20 6 4072 4346 189296148 189295882 1.650000e-84 324.0
7 TraesCS6D01G136000 chr6B 91.398 93 5 1 2336 2425 189298085 189297993 1.790000e-24 124.0
8 TraesCS6D01G136000 chr6A 91.566 2146 112 41 1 2107 125549242 125547127 0.000000e+00 2896.0
9 TraesCS6D01G136000 chr6A 97.774 629 14 0 2892 3520 125545718 125545090 0.000000e+00 1085.0
10 TraesCS6D01G136000 chr6A 97.461 512 13 0 2401 2912 125546240 125545729 0.000000e+00 874.0
11 TraesCS6D01G136000 chr6A 94.861 467 22 2 3609 4074 125545095 125544630 0.000000e+00 728.0
12 TraesCS6D01G136000 chr6A 95.527 313 10 1 2096 2408 125546723 125546415 9.170000e-137 497.0
13 TraesCS6D01G136000 chr6A 90.262 267 13 7 4071 4334 125544585 125544329 2.120000e-88 337.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G136000 chr6D 104148683 104153429 4746 True 8767.0 8767 100.000000 1 4747 1 chr6D.!!$R1 4746
1 TraesCS6D01G136000 chr6B 189295882 189300497 4615 True 1287.2 3380 92.567600 1 4346 5 chr6B.!!$R1 4345
2 TraesCS6D01G136000 chr6A 125544329 125549242 4913 True 1069.5 2896 94.575167 1 4334 6 chr6A.!!$R1 4333

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 217 0.173708 CCAGTAACCCTCGACTCAGC 59.826 60.0 0.00 0.00 0.00 4.26 F
449 467 0.247736 AGCAACCTCTTCCGCTAGTG 59.752 55.0 0.00 0.00 31.60 2.74 F
974 1027 1.953559 TTCGTTCCTCATATGCAGGC 58.046 50.0 13.45 3.82 0.00 4.85 F
2042 2113 0.463833 ACTAAATACCCGCTGCCTGC 60.464 55.0 0.00 0.00 38.57 4.85 F
3544 4515 0.767375 GGCCCCATATTGAGAGCTCA 59.233 55.0 17.77 0.00 37.91 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1112 1166 0.039978 CTATGGCTAGTCGGCGACAG 60.040 60.000 37.71 30.46 42.02 3.51 R
1378 1432 1.567504 CACGGTAACCATAGCCTTCG 58.432 55.000 0.00 0.00 0.00 3.79 R
2937 3783 3.391049 ACAAGAGTAGTTCCGCAAAGTC 58.609 45.455 0.00 0.00 0.00 3.01 R
3683 4655 0.966920 TCGGCTCTTCTTTCTTCGGT 59.033 50.000 0.00 0.00 0.00 4.69 R
4636 5660 0.034380 AGGATGCAGCTGCTCAATGT 60.034 50.000 36.61 16.84 42.66 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 159 4.521062 CTGCCTCCTCTTCGGCCG 62.521 72.222 22.12 22.12 45.71 6.13
199 212 4.686972 GGTATTTACCAGTAACCCTCGAC 58.313 47.826 1.79 0.00 45.73 4.20
200 213 4.403752 GGTATTTACCAGTAACCCTCGACT 59.596 45.833 1.79 0.00 45.73 4.18
201 214 4.732672 ATTTACCAGTAACCCTCGACTC 57.267 45.455 0.00 0.00 0.00 3.36
202 215 2.885135 TACCAGTAACCCTCGACTCA 57.115 50.000 0.00 0.00 0.00 3.41
203 216 1.546961 ACCAGTAACCCTCGACTCAG 58.453 55.000 0.00 0.00 0.00 3.35
204 217 0.173708 CCAGTAACCCTCGACTCAGC 59.826 60.000 0.00 0.00 0.00 4.26
205 218 1.178276 CAGTAACCCTCGACTCAGCT 58.822 55.000 0.00 0.00 0.00 4.24
206 219 1.546476 CAGTAACCCTCGACTCAGCTT 59.454 52.381 0.00 0.00 0.00 3.74
207 220 1.819903 AGTAACCCTCGACTCAGCTTC 59.180 52.381 0.00 0.00 0.00 3.86
300 313 1.588932 TCCGTGCTTCGATGCGATC 60.589 57.895 17.33 9.93 42.86 3.69
449 467 0.247736 AGCAACCTCTTCCGCTAGTG 59.752 55.000 0.00 0.00 31.60 2.74
517 559 4.602340 TTTACTTGACTCTGTGGACTCC 57.398 45.455 0.00 0.00 0.00 3.85
583 625 3.274288 CTCCAGCAAGTCAATAACCCTC 58.726 50.000 0.00 0.00 0.00 4.30
612 654 5.578005 TGTGGAACTAGAGAACCTATTCG 57.422 43.478 0.00 0.00 37.59 3.34
857 910 8.506168 TTATGTCTTCTGGGTCATGAATAAAC 57.494 34.615 0.00 0.00 0.00 2.01
858 911 5.875224 TGTCTTCTGGGTCATGAATAAACA 58.125 37.500 0.00 0.00 0.00 2.83
867 920 5.240623 GGGTCATGAATAAACAGTGTGTGAA 59.759 40.000 0.00 0.00 0.00 3.18
889 942 6.862608 TGAATGAATGTTCGTTTTTCCAGATG 59.137 34.615 2.07 0.00 36.60 2.90
890 943 5.766150 TGAATGTTCGTTTTTCCAGATGT 57.234 34.783 0.00 0.00 0.00 3.06
891 944 5.518812 TGAATGTTCGTTTTTCCAGATGTG 58.481 37.500 0.00 0.00 0.00 3.21
892 945 5.298026 TGAATGTTCGTTTTTCCAGATGTGA 59.702 36.000 0.00 0.00 0.00 3.58
894 947 5.766150 TGTTCGTTTTTCCAGATGTGATT 57.234 34.783 0.00 0.00 0.00 2.57
895 948 6.869315 TGTTCGTTTTTCCAGATGTGATTA 57.131 33.333 0.00 0.00 0.00 1.75
896 949 7.447374 TGTTCGTTTTTCCAGATGTGATTAT 57.553 32.000 0.00 0.00 0.00 1.28
974 1027 1.953559 TTCGTTCCTCATATGCAGGC 58.046 50.000 13.45 3.82 0.00 4.85
984 1037 2.025037 TCATATGCAGGCTCAAAAGGGT 60.025 45.455 0.00 0.00 0.00 4.34
1112 1166 6.940867 AGACCTACAAACTCCTTAATTGAACC 59.059 38.462 0.00 0.00 0.00 3.62
1198 1252 8.160106 ACCTTGGATATCTTCTGGATTTATGAC 58.840 37.037 2.05 0.00 35.98 3.06
1248 1302 5.608676 CATCTTTGCTATGCATCTGGTAG 57.391 43.478 0.19 0.00 38.76 3.18
1327 1381 6.896021 ATTCTCTATGGCTTCATCAATTGG 57.104 37.500 5.42 0.00 32.59 3.16
1729 1788 3.996150 ACAAACTTTGCTCAGTGATGG 57.004 42.857 1.14 0.00 0.00 3.51
1759 1828 4.563140 TTACCCACTTCCATAGTTCCAC 57.437 45.455 0.00 0.00 33.85 4.02
1827 1896 1.935873 CGTCTATGTTCTGGTGGCATG 59.064 52.381 0.00 0.00 0.00 4.06
1851 1920 4.565652 GCTTCTGTCTGGTTAAGGAATGGA 60.566 45.833 0.00 0.00 0.00 3.41
1886 1955 4.090761 TCTGCATGTTCTTTGTTCTCCT 57.909 40.909 0.00 0.00 0.00 3.69
1925 1994 7.466805 TGATTGTCAGCTTTTAATCTTGATCG 58.533 34.615 12.29 0.00 32.28 3.69
1958 2027 5.605488 TGACCCTTTCTGTTCCTAGTTAACT 59.395 40.000 13.68 13.68 0.00 2.24
2042 2113 0.463833 ACTAAATACCCGCTGCCTGC 60.464 55.000 0.00 0.00 38.57 4.85
2066 2137 3.555586 GGCATGTTTCCATTCACTTTGCT 60.556 43.478 0.00 0.00 0.00 3.91
2068 2139 4.624015 CATGTTTCCATTCACTTTGCTGT 58.376 39.130 0.00 0.00 0.00 4.40
2073 2144 2.294233 TCCATTCACTTTGCTGTCTTGC 59.706 45.455 0.00 0.00 0.00 4.01
2079 2150 2.295349 CACTTTGCTGTCTTGCCTCATT 59.705 45.455 0.00 0.00 0.00 2.57
2080 2151 3.503363 CACTTTGCTGTCTTGCCTCATTA 59.497 43.478 0.00 0.00 0.00 1.90
2081 2152 4.022935 CACTTTGCTGTCTTGCCTCATTAA 60.023 41.667 0.00 0.00 0.00 1.40
2170 2657 3.822735 TCTGAAAGATCTTTTGTGCCCTG 59.177 43.478 21.33 11.34 38.67 4.45
2265 2752 8.177119 AGTTACTTTTGGCAGTTGAAATGATA 57.823 30.769 0.00 0.00 0.00 2.15
2376 2979 8.677148 ATGTTGATAGTGTACTTTGTTTCTGT 57.323 30.769 0.00 0.00 0.00 3.41
2629 3444 8.089625 TCATCTCAATCAAACTAACTCCCATA 57.910 34.615 0.00 0.00 0.00 2.74
2633 3448 8.429641 TCTCAATCAAACTAACTCCCATATACC 58.570 37.037 0.00 0.00 0.00 2.73
2864 3679 2.280797 TTGCACCGTCACTGGAGC 60.281 61.111 0.00 2.09 44.72 4.70
2937 3783 5.472148 TGTCATTATTGCAGCTTGGAAAAG 58.528 37.500 0.00 0.00 29.75 2.27
3317 4288 3.521796 GGAAGGCGCTTGGATGGC 61.522 66.667 7.64 0.00 0.00 4.40
3515 4486 8.723942 AAAAGGTTTGTATTTTGTAACATGCA 57.276 26.923 0.00 0.00 0.00 3.96
3532 4503 3.526211 CATCTTGTGATGGCCCCAT 57.474 52.632 0.00 0.00 44.63 4.00
3533 4504 2.662535 CATCTTGTGATGGCCCCATA 57.337 50.000 0.00 0.00 44.63 2.74
3540 4511 2.107031 TGTGATGGCCCCATATTGAGAG 59.893 50.000 0.00 0.00 36.70 3.20
3544 4515 0.767375 GGCCCCATATTGAGAGCTCA 59.233 55.000 17.77 0.00 37.91 4.26
3683 4655 2.355108 CGAGAAGGATGCAAAGGAGGAA 60.355 50.000 0.00 0.00 0.00 3.36
3734 4706 4.822026 CATTCACGGGAAAGAAGTACTCT 58.178 43.478 3.14 0.00 36.43 3.24
3781 4753 8.267894 AGTATGTATTTATCAGCACTTCCTGTT 58.732 33.333 0.00 0.00 34.47 3.16
3795 4767 6.514870 GCACTTCCTGTTACAAACATCATCAA 60.515 38.462 0.00 0.00 41.26 2.57
3839 4811 5.953571 ACTGTTTAGTTTCCTGATCCCTTT 58.046 37.500 0.00 0.00 31.66 3.11
3884 4857 6.342338 GACTACCAGTCCTTCTTTTCTGTA 57.658 41.667 0.00 0.00 39.28 2.74
3974 4947 4.394920 TGGTCATGGATTTTTAGCGAGTTC 59.605 41.667 0.00 0.00 0.00 3.01
3995 4968 4.397420 TCCTACACATTGCATTTGTCTGT 58.603 39.130 0.09 0.62 0.00 3.41
4022 4995 1.145803 GTTCCTACACCAGCACGTTC 58.854 55.000 0.00 0.00 0.00 3.95
4117 5139 6.253727 GCAAGGAATAGTCGATATGTATTCGG 59.746 42.308 0.00 0.00 35.04 4.30
4163 5185 6.647067 GCTTGTTAGCTCTAAAGTGAGAGAAA 59.353 38.462 4.63 0.00 45.03 2.52
4177 5199 8.970859 AAGTGAGAGAAATACATAATCCCAAG 57.029 34.615 0.00 0.00 0.00 3.61
4179 5201 8.772250 AGTGAGAGAAATACATAATCCCAAGAA 58.228 33.333 0.00 0.00 0.00 2.52
4180 5202 9.396022 GTGAGAGAAATACATAATCCCAAGAAA 57.604 33.333 0.00 0.00 0.00 2.52
4181 5203 9.618890 TGAGAGAAATACATAATCCCAAGAAAG 57.381 33.333 0.00 0.00 0.00 2.62
4182 5204 8.986929 AGAGAAATACATAATCCCAAGAAAGG 57.013 34.615 0.00 0.00 0.00 3.11
4183 5205 8.781951 AGAGAAATACATAATCCCAAGAAAGGA 58.218 33.333 0.00 0.00 37.93 3.36
4184 5206 9.408648 GAGAAATACATAATCCCAAGAAAGGAA 57.591 33.333 0.00 0.00 36.85 3.36
4185 5207 9.768215 AGAAATACATAATCCCAAGAAAGGAAA 57.232 29.630 0.00 0.00 36.85 3.13
4186 5208 9.803315 GAAATACATAATCCCAAGAAAGGAAAC 57.197 33.333 0.00 0.00 36.85 2.78
4187 5209 7.898014 ATACATAATCCCAAGAAAGGAAACC 57.102 36.000 0.00 0.00 36.85 3.27
4254 5276 6.095947 GAACTTTACTGATTAGTTCGCCAG 57.904 41.667 0.00 0.00 38.63 4.85
4294 5318 4.142609 TCTTCTACATGATGTTGGAGCC 57.857 45.455 9.99 0.00 30.34 4.70
4320 5344 4.497507 CGCACACGATAGGTTGAAGATCTA 60.498 45.833 0.00 0.00 43.93 1.98
4323 5347 5.455849 CACACGATAGGTTGAAGATCTAACG 59.544 44.000 0.00 0.00 43.77 3.18
4326 5350 6.632035 CACGATAGGTTGAAGATCTAACGTAC 59.368 42.308 11.20 6.71 39.33 3.67
4346 5370 1.065701 CGCACGTCCTTAGCATCTACT 59.934 52.381 0.00 0.00 0.00 2.57
4347 5371 2.289820 CGCACGTCCTTAGCATCTACTA 59.710 50.000 0.00 0.00 0.00 1.82
4348 5372 3.630101 GCACGTCCTTAGCATCTACTAC 58.370 50.000 0.00 0.00 0.00 2.73
4349 5373 3.550436 GCACGTCCTTAGCATCTACTACC 60.550 52.174 0.00 0.00 0.00 3.18
4350 5374 3.884091 CACGTCCTTAGCATCTACTACCT 59.116 47.826 0.00 0.00 0.00 3.08
4351 5375 4.023878 CACGTCCTTAGCATCTACTACCTC 60.024 50.000 0.00 0.00 0.00 3.85
4352 5376 4.141436 ACGTCCTTAGCATCTACTACCTCT 60.141 45.833 0.00 0.00 0.00 3.69
4353 5377 4.453136 CGTCCTTAGCATCTACTACCTCTC 59.547 50.000 0.00 0.00 0.00 3.20
4354 5378 5.627135 GTCCTTAGCATCTACTACCTCTCT 58.373 45.833 0.00 0.00 0.00 3.10
4355 5379 6.066032 GTCCTTAGCATCTACTACCTCTCTT 58.934 44.000 0.00 0.00 0.00 2.85
4356 5380 6.206048 GTCCTTAGCATCTACTACCTCTCTTC 59.794 46.154 0.00 0.00 0.00 2.87
4357 5381 5.475564 CCTTAGCATCTACTACCTCTCTTCC 59.524 48.000 0.00 0.00 0.00 3.46
4358 5382 4.528076 AGCATCTACTACCTCTCTTCCA 57.472 45.455 0.00 0.00 0.00 3.53
4359 5383 4.873010 AGCATCTACTACCTCTCTTCCAA 58.127 43.478 0.00 0.00 0.00 3.53
4360 5384 4.647399 AGCATCTACTACCTCTCTTCCAAC 59.353 45.833 0.00 0.00 0.00 3.77
4361 5385 4.402793 GCATCTACTACCTCTCTTCCAACA 59.597 45.833 0.00 0.00 0.00 3.33
4362 5386 5.069781 GCATCTACTACCTCTCTTCCAACAT 59.930 44.000 0.00 0.00 0.00 2.71
4363 5387 6.265649 GCATCTACTACCTCTCTTCCAACATA 59.734 42.308 0.00 0.00 0.00 2.29
4364 5388 7.523052 GCATCTACTACCTCTCTTCCAACATAG 60.523 44.444 0.00 0.00 0.00 2.23
4365 5389 6.366340 TCTACTACCTCTCTTCCAACATAGG 58.634 44.000 0.00 0.00 0.00 2.57
4366 5390 4.949121 ACTACCTCTCTTCCAACATAGGT 58.051 43.478 0.00 0.00 40.38 3.08
4367 5391 5.342866 ACTACCTCTCTTCCAACATAGGTT 58.657 41.667 0.00 0.00 38.31 3.50
4387 5411 4.567159 GGTTGAAGATCTAACCTACTTGCG 59.433 45.833 17.01 0.00 42.37 4.85
4388 5412 5.169295 GTTGAAGATCTAACCTACTTGCGT 58.831 41.667 0.00 0.00 0.00 5.24
4389 5413 4.995124 TGAAGATCTAACCTACTTGCGTC 58.005 43.478 0.00 0.00 0.00 5.19
4390 5414 4.142227 TGAAGATCTAACCTACTTGCGTCC 60.142 45.833 0.00 0.00 0.00 4.79
4391 5415 3.633418 AGATCTAACCTACTTGCGTCCT 58.367 45.455 0.00 0.00 0.00 3.85
4392 5416 4.024670 AGATCTAACCTACTTGCGTCCTT 58.975 43.478 0.00 0.00 0.00 3.36
4393 5417 5.198965 AGATCTAACCTACTTGCGTCCTTA 58.801 41.667 0.00 0.00 0.00 2.69
4394 5418 4.978083 TCTAACCTACTTGCGTCCTTAG 57.022 45.455 0.00 0.00 0.00 2.18
4395 5419 2.381725 AACCTACTTGCGTCCTTAGC 57.618 50.000 0.00 0.00 0.00 3.09
4396 5420 1.263356 ACCTACTTGCGTCCTTAGCA 58.737 50.000 0.00 0.00 43.59 3.49
4397 5421 1.831736 ACCTACTTGCGTCCTTAGCAT 59.168 47.619 0.00 0.00 44.74 3.79
4398 5422 2.159085 ACCTACTTGCGTCCTTAGCATC 60.159 50.000 0.00 0.00 44.74 3.91
4399 5423 2.101582 CCTACTTGCGTCCTTAGCATCT 59.898 50.000 0.00 0.00 44.74 2.90
4400 5424 3.318275 CCTACTTGCGTCCTTAGCATCTA 59.682 47.826 0.00 0.00 44.74 1.98
4401 5425 3.166489 ACTTGCGTCCTTAGCATCTAC 57.834 47.619 0.00 0.00 44.74 2.59
4402 5426 2.761208 ACTTGCGTCCTTAGCATCTACT 59.239 45.455 0.00 0.00 44.74 2.57
4403 5427 3.952323 ACTTGCGTCCTTAGCATCTACTA 59.048 43.478 0.00 0.00 44.74 1.82
4404 5428 3.984508 TGCGTCCTTAGCATCTACTAC 57.015 47.619 0.00 0.00 40.01 2.73
4405 5429 2.621998 TGCGTCCTTAGCATCTACTACC 59.378 50.000 0.00 0.00 40.01 3.18
4406 5430 2.885894 GCGTCCTTAGCATCTACTACCT 59.114 50.000 0.00 0.00 34.19 3.08
4407 5431 3.058085 GCGTCCTTAGCATCTACTACCTC 60.058 52.174 0.00 0.00 34.19 3.85
4408 5432 4.391155 CGTCCTTAGCATCTACTACCTCT 58.609 47.826 0.00 0.00 0.00 3.69
4409 5433 4.214545 CGTCCTTAGCATCTACTACCTCTG 59.785 50.000 0.00 0.00 0.00 3.35
4410 5434 5.134661 GTCCTTAGCATCTACTACCTCTGT 58.865 45.833 0.00 0.00 0.00 3.41
4411 5435 5.595133 GTCCTTAGCATCTACTACCTCTGTT 59.405 44.000 0.00 0.00 0.00 3.16
4412 5436 5.828859 TCCTTAGCATCTACTACCTCTGTTC 59.171 44.000 0.00 0.00 0.00 3.18
4413 5437 5.010213 CCTTAGCATCTACTACCTCTGTTCC 59.990 48.000 0.00 0.00 0.00 3.62
4414 5438 3.982516 AGCATCTACTACCTCTGTTCCA 58.017 45.455 0.00 0.00 0.00 3.53
4415 5439 4.353777 AGCATCTACTACCTCTGTTCCAA 58.646 43.478 0.00 0.00 0.00 3.53
4416 5440 4.777896 AGCATCTACTACCTCTGTTCCAAA 59.222 41.667 0.00 0.00 0.00 3.28
4417 5441 5.248477 AGCATCTACTACCTCTGTTCCAAAA 59.752 40.000 0.00 0.00 0.00 2.44
4418 5442 6.069963 AGCATCTACTACCTCTGTTCCAAAAT 60.070 38.462 0.00 0.00 0.00 1.82
4419 5443 7.125811 AGCATCTACTACCTCTGTTCCAAAATA 59.874 37.037 0.00 0.00 0.00 1.40
4420 5444 7.934120 GCATCTACTACCTCTGTTCCAAAATAT 59.066 37.037 0.00 0.00 0.00 1.28
4460 5484 4.364415 AAACTAGCTTGCAAAAACGTCA 57.636 36.364 0.00 0.00 0.00 4.35
4461 5485 4.568152 AACTAGCTTGCAAAAACGTCAT 57.432 36.364 0.00 0.00 0.00 3.06
4462 5486 5.682943 AACTAGCTTGCAAAAACGTCATA 57.317 34.783 0.00 0.00 0.00 2.15
4463 5487 5.880054 ACTAGCTTGCAAAAACGTCATAT 57.120 34.783 0.00 0.00 0.00 1.78
4464 5488 6.978343 ACTAGCTTGCAAAAACGTCATATA 57.022 33.333 0.00 0.00 0.00 0.86
4465 5489 7.553881 ACTAGCTTGCAAAAACGTCATATAT 57.446 32.000 0.00 0.00 0.00 0.86
4466 5490 7.985476 ACTAGCTTGCAAAAACGTCATATATT 58.015 30.769 0.00 0.00 0.00 1.28
4467 5491 8.458843 ACTAGCTTGCAAAAACGTCATATATTT 58.541 29.630 0.00 0.00 0.00 1.40
4468 5492 9.289303 CTAGCTTGCAAAAACGTCATATATTTT 57.711 29.630 0.00 0.00 0.00 1.82
4469 5493 7.952339 AGCTTGCAAAAACGTCATATATTTTG 58.048 30.769 13.82 13.82 42.66 2.44
4470 5494 7.063308 AGCTTGCAAAAACGTCATATATTTTGG 59.937 33.333 17.78 6.96 41.02 3.28
4471 5495 7.062839 GCTTGCAAAAACGTCATATATTTTGGA 59.937 33.333 17.78 14.10 41.02 3.53
4472 5496 8.818141 TTGCAAAAACGTCATATATTTTGGAA 57.182 26.923 18.03 18.03 44.87 3.53
4473 5497 8.233692 TGCAAAAACGTCATATATTTTGGAAC 57.766 30.769 17.78 6.55 39.20 3.62
4474 5498 7.061210 TGCAAAAACGTCATATATTTTGGAACG 59.939 33.333 17.78 0.00 39.20 3.95
4475 5499 7.380320 CAAAAACGTCATATATTTTGGAACGC 58.620 34.615 11.33 0.00 38.47 4.84
4476 5500 5.804692 AACGTCATATATTTTGGAACGCA 57.195 34.783 0.00 0.00 0.00 5.24
4477 5501 5.403897 ACGTCATATATTTTGGAACGCAG 57.596 39.130 0.00 0.00 0.00 5.18
4478 5502 4.272504 ACGTCATATATTTTGGAACGCAGG 59.727 41.667 0.00 0.00 0.00 4.85
4479 5503 4.272504 CGTCATATATTTTGGAACGCAGGT 59.727 41.667 0.00 0.00 0.00 4.00
4480 5504 5.510671 GTCATATATTTTGGAACGCAGGTG 58.489 41.667 0.00 0.00 0.00 4.00
4481 5505 5.295787 GTCATATATTTTGGAACGCAGGTGA 59.704 40.000 0.00 0.00 0.00 4.02
4482 5506 6.017109 GTCATATATTTTGGAACGCAGGTGAT 60.017 38.462 0.00 0.00 0.00 3.06
4483 5507 7.172532 GTCATATATTTTGGAACGCAGGTGATA 59.827 37.037 0.00 0.00 0.00 2.15
4484 5508 5.751243 ATATTTTGGAACGCAGGTGATAC 57.249 39.130 0.00 0.00 0.00 2.24
4485 5509 2.552599 TTTGGAACGCAGGTGATACA 57.447 45.000 0.00 0.00 0.00 2.29
4486 5510 2.552599 TTGGAACGCAGGTGATACAA 57.447 45.000 0.00 0.00 0.00 2.41
4487 5511 2.779755 TGGAACGCAGGTGATACAAT 57.220 45.000 0.00 0.00 0.00 2.71
4488 5512 2.627945 TGGAACGCAGGTGATACAATC 58.372 47.619 0.00 0.00 0.00 2.67
4489 5513 2.027653 TGGAACGCAGGTGATACAATCA 60.028 45.455 0.00 0.00 36.84 2.57
4490 5514 2.609459 GGAACGCAGGTGATACAATCAG 59.391 50.000 0.00 0.00 40.53 2.90
4491 5515 3.521560 GAACGCAGGTGATACAATCAGA 58.478 45.455 0.00 0.00 40.53 3.27
4492 5516 3.827008 ACGCAGGTGATACAATCAGAT 57.173 42.857 0.00 0.00 40.53 2.90
4493 5517 4.937201 ACGCAGGTGATACAATCAGATA 57.063 40.909 0.00 0.00 40.53 1.98
4494 5518 5.474578 ACGCAGGTGATACAATCAGATAT 57.525 39.130 0.00 0.00 40.53 1.63
4495 5519 6.590234 ACGCAGGTGATACAATCAGATATA 57.410 37.500 0.00 0.00 40.53 0.86
4496 5520 6.993079 ACGCAGGTGATACAATCAGATATAA 58.007 36.000 0.00 0.00 40.53 0.98
4497 5521 7.093354 ACGCAGGTGATACAATCAGATATAAG 58.907 38.462 0.00 0.00 40.53 1.73
4498 5522 6.533012 CGCAGGTGATACAATCAGATATAAGG 59.467 42.308 0.00 0.00 40.53 2.69
4499 5523 7.390027 GCAGGTGATACAATCAGATATAAGGT 58.610 38.462 0.00 0.00 40.53 3.50
4500 5524 8.531982 GCAGGTGATACAATCAGATATAAGGTA 58.468 37.037 0.00 0.00 40.53 3.08
4509 5533 9.213777 ACAATCAGATATAAGGTAGAAAGTGGA 57.786 33.333 0.00 0.00 0.00 4.02
4512 5536 8.251383 TCAGATATAAGGTAGAAAGTGGAAGG 57.749 38.462 0.00 0.00 0.00 3.46
4513 5537 8.065627 TCAGATATAAGGTAGAAAGTGGAAGGA 58.934 37.037 0.00 0.00 0.00 3.36
4514 5538 8.705594 CAGATATAAGGTAGAAAGTGGAAGGAA 58.294 37.037 0.00 0.00 0.00 3.36
4515 5539 8.706521 AGATATAAGGTAGAAAGTGGAAGGAAC 58.293 37.037 0.00 0.00 0.00 3.62
4516 5540 3.679824 AGGTAGAAAGTGGAAGGAACG 57.320 47.619 0.00 0.00 0.00 3.95
4517 5541 2.074576 GGTAGAAAGTGGAAGGAACGC 58.925 52.381 0.00 0.00 0.00 4.84
4518 5542 2.549349 GGTAGAAAGTGGAAGGAACGCA 60.549 50.000 0.00 0.00 0.00 5.24
4519 5543 1.884235 AGAAAGTGGAAGGAACGCAG 58.116 50.000 0.00 0.00 0.00 5.18
4520 5544 0.875059 GAAAGTGGAAGGAACGCAGG 59.125 55.000 0.00 0.00 0.00 4.85
4521 5545 0.182775 AAAGTGGAAGGAACGCAGGT 59.817 50.000 0.00 0.00 0.00 4.00
4522 5546 0.535102 AAGTGGAAGGAACGCAGGTG 60.535 55.000 0.00 0.00 0.00 4.00
4523 5547 1.070786 GTGGAAGGAACGCAGGTGA 59.929 57.895 0.00 0.00 0.00 4.02
4524 5548 0.321653 GTGGAAGGAACGCAGGTGAT 60.322 55.000 0.00 0.00 0.00 3.06
4525 5549 1.066430 GTGGAAGGAACGCAGGTGATA 60.066 52.381 0.00 0.00 0.00 2.15
4526 5550 1.066430 TGGAAGGAACGCAGGTGATAC 60.066 52.381 0.00 0.00 0.00 2.24
4527 5551 1.066430 GGAAGGAACGCAGGTGATACA 60.066 52.381 0.00 0.00 0.00 2.29
4528 5552 2.614481 GGAAGGAACGCAGGTGATACAA 60.614 50.000 0.00 0.00 0.00 2.41
4529 5553 3.270877 GAAGGAACGCAGGTGATACAAT 58.729 45.455 0.00 0.00 0.00 2.71
4530 5554 2.906354 AGGAACGCAGGTGATACAATC 58.094 47.619 0.00 0.00 0.00 2.67
4531 5555 2.236146 AGGAACGCAGGTGATACAATCA 59.764 45.455 0.00 0.00 36.84 2.57
4532 5556 2.609459 GGAACGCAGGTGATACAATCAG 59.391 50.000 0.00 0.00 40.53 2.90
4533 5557 3.521560 GAACGCAGGTGATACAATCAGA 58.478 45.455 0.00 0.00 40.53 3.27
4534 5558 3.827008 ACGCAGGTGATACAATCAGAT 57.173 42.857 0.00 0.00 40.53 2.90
4535 5559 4.937201 ACGCAGGTGATACAATCAGATA 57.063 40.909 0.00 0.00 40.53 1.98
4536 5560 5.474578 ACGCAGGTGATACAATCAGATAT 57.525 39.130 0.00 0.00 40.53 1.63
4537 5561 6.590234 ACGCAGGTGATACAATCAGATATA 57.410 37.500 0.00 0.00 40.53 0.86
4538 5562 6.993079 ACGCAGGTGATACAATCAGATATAA 58.007 36.000 0.00 0.00 40.53 0.98
4539 5563 7.093354 ACGCAGGTGATACAATCAGATATAAG 58.907 38.462 0.00 0.00 40.53 1.73
4540 5564 6.533012 CGCAGGTGATACAATCAGATATAAGG 59.467 42.308 0.00 0.00 40.53 2.69
4541 5565 7.390027 GCAGGTGATACAATCAGATATAAGGT 58.610 38.462 0.00 0.00 40.53 3.50
4542 5566 8.531982 GCAGGTGATACAATCAGATATAAGGTA 58.468 37.037 0.00 0.00 40.53 3.08
4551 5575 9.213777 ACAATCAGATATAAGGTAGAAAGTGGA 57.786 33.333 0.00 0.00 0.00 4.02
4554 5578 7.713750 TCAGATATAAGGTAGAAAGTGGAACG 58.286 38.462 0.00 0.00 45.86 3.95
4555 5579 6.924060 CAGATATAAGGTAGAAAGTGGAACGG 59.076 42.308 0.00 0.00 45.86 4.44
4556 5580 6.610425 AGATATAAGGTAGAAAGTGGAACGGT 59.390 38.462 0.00 0.00 45.86 4.83
4557 5581 7.781693 AGATATAAGGTAGAAAGTGGAACGGTA 59.218 37.037 0.00 0.00 45.86 4.02
4558 5582 6.803366 ATAAGGTAGAAAGTGGAACGGTAT 57.197 37.500 0.00 0.00 45.86 2.73
4559 5583 4.732672 AGGTAGAAAGTGGAACGGTATC 57.267 45.455 0.00 0.00 45.86 2.24
4560 5584 3.450096 AGGTAGAAAGTGGAACGGTATCC 59.550 47.826 0.00 0.00 45.86 2.59
4567 5591 2.373540 TGGAACGGTATCCAACGAAG 57.626 50.000 4.58 0.00 46.36 3.79
4568 5592 1.004595 GGAACGGTATCCAACGAAGC 58.995 55.000 0.00 0.00 39.42 3.86
4569 5593 1.004595 GAACGGTATCCAACGAAGCC 58.995 55.000 0.00 0.00 0.00 4.35
4570 5594 0.322322 AACGGTATCCAACGAAGCCA 59.678 50.000 0.00 0.00 0.00 4.75
4571 5595 0.108329 ACGGTATCCAACGAAGCCAG 60.108 55.000 0.00 0.00 0.00 4.85
4572 5596 0.174845 CGGTATCCAACGAAGCCAGA 59.825 55.000 0.00 0.00 0.00 3.86
4573 5597 1.404986 CGGTATCCAACGAAGCCAGAA 60.405 52.381 0.00 0.00 0.00 3.02
4574 5598 2.706890 GGTATCCAACGAAGCCAGAAA 58.293 47.619 0.00 0.00 0.00 2.52
4575 5599 3.078837 GGTATCCAACGAAGCCAGAAAA 58.921 45.455 0.00 0.00 0.00 2.29
4576 5600 3.127030 GGTATCCAACGAAGCCAGAAAAG 59.873 47.826 0.00 0.00 0.00 2.27
4577 5601 1.604604 TCCAACGAAGCCAGAAAAGG 58.395 50.000 0.00 0.00 0.00 3.11
4596 5620 2.754472 GGCAACTCCAAAACACAATCC 58.246 47.619 0.00 0.00 34.01 3.01
4597 5621 2.365293 GGCAACTCCAAAACACAATCCT 59.635 45.455 0.00 0.00 34.01 3.24
4598 5622 3.181466 GGCAACTCCAAAACACAATCCTT 60.181 43.478 0.00 0.00 34.01 3.36
4599 5623 3.803778 GCAACTCCAAAACACAATCCTTG 59.196 43.478 0.00 0.00 0.00 3.61
4600 5624 3.733443 ACTCCAAAACACAATCCTTGC 57.267 42.857 0.00 0.00 0.00 4.01
4601 5625 3.299503 ACTCCAAAACACAATCCTTGCT 58.700 40.909 0.00 0.00 0.00 3.91
4602 5626 3.319122 ACTCCAAAACACAATCCTTGCTC 59.681 43.478 0.00 0.00 0.00 4.26
4603 5627 2.293122 TCCAAAACACAATCCTTGCTCG 59.707 45.455 0.00 0.00 0.00 5.03
4604 5628 2.293122 CCAAAACACAATCCTTGCTCGA 59.707 45.455 0.00 0.00 0.00 4.04
4605 5629 3.243367 CCAAAACACAATCCTTGCTCGAA 60.243 43.478 0.00 0.00 0.00 3.71
4606 5630 4.549458 CAAAACACAATCCTTGCTCGAAT 58.451 39.130 0.00 0.00 0.00 3.34
4607 5631 4.853924 AAACACAATCCTTGCTCGAATT 57.146 36.364 0.00 0.00 0.00 2.17
4608 5632 5.957842 AAACACAATCCTTGCTCGAATTA 57.042 34.783 0.00 0.00 0.00 1.40
4609 5633 6.515272 AAACACAATCCTTGCTCGAATTAT 57.485 33.333 0.00 0.00 0.00 1.28
4610 5634 6.515272 AACACAATCCTTGCTCGAATTATT 57.485 33.333 0.00 0.00 0.00 1.40
4611 5635 6.515272 ACACAATCCTTGCTCGAATTATTT 57.485 33.333 0.00 0.00 0.00 1.40
4612 5636 6.324819 ACACAATCCTTGCTCGAATTATTTG 58.675 36.000 0.00 0.00 0.00 2.32
4613 5637 6.071952 ACACAATCCTTGCTCGAATTATTTGT 60.072 34.615 0.00 0.00 0.00 2.83
4614 5638 6.252015 CACAATCCTTGCTCGAATTATTTGTG 59.748 38.462 0.00 0.00 35.74 3.33
4615 5639 6.150976 ACAATCCTTGCTCGAATTATTTGTGA 59.849 34.615 0.00 0.00 0.00 3.58
4616 5640 5.545658 TCCTTGCTCGAATTATTTGTGAC 57.454 39.130 0.00 0.00 0.00 3.67
4617 5641 5.245531 TCCTTGCTCGAATTATTTGTGACT 58.754 37.500 0.00 0.00 0.00 3.41
4618 5642 5.705441 TCCTTGCTCGAATTATTTGTGACTT 59.295 36.000 0.00 0.00 0.00 3.01
4619 5643 5.796935 CCTTGCTCGAATTATTTGTGACTTG 59.203 40.000 0.00 0.00 0.00 3.16
4620 5644 5.295431 TGCTCGAATTATTTGTGACTTGG 57.705 39.130 0.00 0.00 0.00 3.61
4621 5645 5.000591 TGCTCGAATTATTTGTGACTTGGA 58.999 37.500 0.00 0.00 0.00 3.53
4622 5646 5.122239 TGCTCGAATTATTTGTGACTTGGAG 59.878 40.000 0.00 0.00 0.00 3.86
4623 5647 5.545658 TCGAATTATTTGTGACTTGGAGC 57.454 39.130 0.00 0.00 0.00 4.70
4624 5648 5.000591 TCGAATTATTTGTGACTTGGAGCA 58.999 37.500 0.00 0.00 0.00 4.26
4625 5649 5.471797 TCGAATTATTTGTGACTTGGAGCAA 59.528 36.000 0.00 0.00 0.00 3.91
4626 5650 5.569059 CGAATTATTTGTGACTTGGAGCAAC 59.431 40.000 0.00 0.00 0.00 4.17
4627 5651 4.481930 TTATTTGTGACTTGGAGCAACG 57.518 40.909 0.00 0.00 0.00 4.10
4628 5652 0.380378 TTTGTGACTTGGAGCAACGC 59.620 50.000 0.00 0.00 0.00 4.84
4629 5653 0.463654 TTGTGACTTGGAGCAACGCT 60.464 50.000 0.00 0.00 43.88 5.07
4630 5654 1.159713 TGTGACTTGGAGCAACGCTG 61.160 55.000 0.00 0.00 39.88 5.18
4631 5655 1.146041 TGACTTGGAGCAACGCTGT 59.854 52.632 0.00 0.00 39.88 4.40
4632 5656 1.159713 TGACTTGGAGCAACGCTGTG 61.160 55.000 0.00 0.00 39.88 3.66
4633 5657 0.880278 GACTTGGAGCAACGCTGTGA 60.880 55.000 0.00 0.00 39.88 3.58
4634 5658 0.463654 ACTTGGAGCAACGCTGTGAA 60.464 50.000 0.00 0.00 39.88 3.18
4635 5659 0.662619 CTTGGAGCAACGCTGTGAAA 59.337 50.000 0.00 0.00 39.88 2.69
4636 5660 1.065401 CTTGGAGCAACGCTGTGAAAA 59.935 47.619 0.00 0.00 39.88 2.29
4637 5661 0.380378 TGGAGCAACGCTGTGAAAAC 59.620 50.000 0.00 0.00 39.88 2.43
4638 5662 0.380378 GGAGCAACGCTGTGAAAACA 59.620 50.000 0.00 0.00 39.88 2.83
4639 5663 1.001378 GGAGCAACGCTGTGAAAACAT 60.001 47.619 0.00 0.00 39.88 2.71
4640 5664 2.543653 GGAGCAACGCTGTGAAAACATT 60.544 45.455 0.00 0.00 39.88 2.71
4641 5665 2.462889 AGCAACGCTGTGAAAACATTG 58.537 42.857 0.00 0.00 37.57 2.82
4642 5666 2.098934 AGCAACGCTGTGAAAACATTGA 59.901 40.909 0.00 0.00 37.57 2.57
4643 5667 2.468777 GCAACGCTGTGAAAACATTGAG 59.531 45.455 0.00 0.00 0.00 3.02
4644 5668 2.405892 ACGCTGTGAAAACATTGAGC 57.594 45.000 0.00 0.00 0.00 4.26
4645 5669 1.675483 ACGCTGTGAAAACATTGAGCA 59.325 42.857 0.00 0.00 0.00 4.26
4646 5670 2.287188 ACGCTGTGAAAACATTGAGCAG 60.287 45.455 0.00 0.00 0.00 4.24
4647 5671 2.056577 GCTGTGAAAACATTGAGCAGC 58.943 47.619 0.00 0.00 40.48 5.25
4648 5672 2.288030 GCTGTGAAAACATTGAGCAGCT 60.288 45.455 0.00 0.00 42.92 4.24
4649 5673 3.305964 CTGTGAAAACATTGAGCAGCTG 58.694 45.455 10.11 10.11 0.00 4.24
4650 5674 2.056577 GTGAAAACATTGAGCAGCTGC 58.943 47.619 31.53 31.53 42.49 5.25
4651 5675 1.682323 TGAAAACATTGAGCAGCTGCA 59.318 42.857 38.24 20.45 45.16 4.41
4652 5676 2.297880 TGAAAACATTGAGCAGCTGCAT 59.702 40.909 38.24 23.95 45.16 3.96
4653 5677 2.649331 AAACATTGAGCAGCTGCATC 57.351 45.000 38.24 29.63 45.16 3.91
4654 5678 0.815734 AACATTGAGCAGCTGCATCC 59.184 50.000 38.24 26.02 45.16 3.51
4655 5679 0.034380 ACATTGAGCAGCTGCATCCT 60.034 50.000 38.24 19.88 45.16 3.24
4656 5680 1.211212 ACATTGAGCAGCTGCATCCTA 59.789 47.619 38.24 23.08 45.16 2.94
4657 5681 2.294979 CATTGAGCAGCTGCATCCTAA 58.705 47.619 38.24 24.03 45.16 2.69
4658 5682 2.723322 TTGAGCAGCTGCATCCTAAT 57.277 45.000 38.24 17.87 45.16 1.73
4659 5683 2.251409 TGAGCAGCTGCATCCTAATC 57.749 50.000 38.24 25.07 45.16 1.75
4660 5684 1.487558 TGAGCAGCTGCATCCTAATCA 59.512 47.619 38.24 27.24 45.16 2.57
4661 5685 2.105993 TGAGCAGCTGCATCCTAATCAT 59.894 45.455 38.24 15.47 45.16 2.45
4662 5686 3.325716 TGAGCAGCTGCATCCTAATCATA 59.674 43.478 38.24 12.59 45.16 2.15
4663 5687 3.933955 GAGCAGCTGCATCCTAATCATAG 59.066 47.826 38.24 0.00 45.16 2.23
4664 5688 3.327172 AGCAGCTGCATCCTAATCATAGT 59.673 43.478 38.24 11.50 45.16 2.12
4665 5689 4.070716 GCAGCTGCATCCTAATCATAGTT 58.929 43.478 33.36 0.00 41.59 2.24
4666 5690 4.083431 GCAGCTGCATCCTAATCATAGTTG 60.083 45.833 33.36 0.00 41.59 3.16
4667 5691 5.061853 CAGCTGCATCCTAATCATAGTTGT 58.938 41.667 0.00 0.00 0.00 3.32
4668 5692 5.049612 CAGCTGCATCCTAATCATAGTTGTG 60.050 44.000 0.00 0.00 0.00 3.33
4669 5693 4.320057 GCTGCATCCTAATCATAGTTGTGC 60.320 45.833 0.00 0.00 33.26 4.57
4670 5694 5.039920 TGCATCCTAATCATAGTTGTGCT 57.960 39.130 0.00 0.00 33.55 4.40
4671 5695 5.059161 TGCATCCTAATCATAGTTGTGCTC 58.941 41.667 0.00 0.00 33.55 4.26
4672 5696 5.163269 TGCATCCTAATCATAGTTGTGCTCT 60.163 40.000 0.00 0.00 33.55 4.09
4673 5697 5.178996 GCATCCTAATCATAGTTGTGCTCTG 59.821 44.000 0.00 0.00 31.54 3.35
4674 5698 5.939764 TCCTAATCATAGTTGTGCTCTGT 57.060 39.130 0.00 0.00 0.00 3.41
4675 5699 6.299805 TCCTAATCATAGTTGTGCTCTGTT 57.700 37.500 0.00 0.00 0.00 3.16
4676 5700 6.711277 TCCTAATCATAGTTGTGCTCTGTTT 58.289 36.000 0.00 0.00 0.00 2.83
4677 5701 7.168219 TCCTAATCATAGTTGTGCTCTGTTTT 58.832 34.615 0.00 0.00 0.00 2.43
4678 5702 7.334421 TCCTAATCATAGTTGTGCTCTGTTTTC 59.666 37.037 0.00 0.00 0.00 2.29
4679 5703 4.990543 TCATAGTTGTGCTCTGTTTTCG 57.009 40.909 0.00 0.00 0.00 3.46
4680 5704 4.377021 TCATAGTTGTGCTCTGTTTTCGT 58.623 39.130 0.00 0.00 0.00 3.85
4681 5705 4.814234 TCATAGTTGTGCTCTGTTTTCGTT 59.186 37.500 0.00 0.00 0.00 3.85
4682 5706 3.675467 AGTTGTGCTCTGTTTTCGTTC 57.325 42.857 0.00 0.00 0.00 3.95
4683 5707 2.030457 AGTTGTGCTCTGTTTTCGTTCG 59.970 45.455 0.00 0.00 0.00 3.95
4684 5708 0.303493 TGTGCTCTGTTTTCGTTCGC 59.697 50.000 0.00 0.00 0.00 4.70
4685 5709 0.303493 GTGCTCTGTTTTCGTTCGCA 59.697 50.000 0.00 0.00 0.00 5.10
4686 5710 0.303493 TGCTCTGTTTTCGTTCGCAC 59.697 50.000 0.00 0.00 0.00 5.34
4687 5711 0.582005 GCTCTGTTTTCGTTCGCACT 59.418 50.000 0.00 0.00 0.00 4.40
4688 5712 1.657538 GCTCTGTTTTCGTTCGCACTG 60.658 52.381 0.00 0.00 0.00 3.66
4689 5713 1.858458 CTCTGTTTTCGTTCGCACTGA 59.142 47.619 0.00 0.00 0.00 3.41
4690 5714 2.476619 CTCTGTTTTCGTTCGCACTGAT 59.523 45.455 0.00 0.00 0.00 2.90
4691 5715 2.220824 TCTGTTTTCGTTCGCACTGATG 59.779 45.455 0.00 0.00 0.00 3.07
4692 5716 1.262950 TGTTTTCGTTCGCACTGATGG 59.737 47.619 0.00 0.00 0.00 3.51
4693 5717 0.237235 TTTTCGTTCGCACTGATGGC 59.763 50.000 0.00 0.00 0.00 4.40
4694 5718 0.882484 TTTCGTTCGCACTGATGGCA 60.882 50.000 0.00 0.00 0.00 4.92
4695 5719 0.673333 TTCGTTCGCACTGATGGCAT 60.673 50.000 0.00 0.00 0.00 4.40
4696 5720 0.174617 TCGTTCGCACTGATGGCATA 59.825 50.000 0.00 0.00 0.00 3.14
4697 5721 0.301687 CGTTCGCACTGATGGCATAC 59.698 55.000 0.00 0.00 0.00 2.39
4698 5722 1.656652 GTTCGCACTGATGGCATACT 58.343 50.000 0.00 0.00 0.00 2.12
4699 5723 2.798145 CGTTCGCACTGATGGCATACTA 60.798 50.000 0.00 0.00 0.00 1.82
4700 5724 3.194861 GTTCGCACTGATGGCATACTAA 58.805 45.455 0.00 0.00 0.00 2.24
4701 5725 3.535280 TCGCACTGATGGCATACTAAA 57.465 42.857 0.00 0.00 0.00 1.85
4702 5726 3.194861 TCGCACTGATGGCATACTAAAC 58.805 45.455 0.00 0.00 0.00 2.01
4703 5727 2.287915 CGCACTGATGGCATACTAAACC 59.712 50.000 0.00 0.00 0.00 3.27
4704 5728 3.545703 GCACTGATGGCATACTAAACCT 58.454 45.455 0.00 0.00 0.00 3.50
4705 5729 3.561725 GCACTGATGGCATACTAAACCTC 59.438 47.826 0.00 0.00 0.00 3.85
4706 5730 3.804325 CACTGATGGCATACTAAACCTCG 59.196 47.826 0.00 0.00 0.00 4.63
4707 5731 3.704566 ACTGATGGCATACTAAACCTCGA 59.295 43.478 0.00 0.00 0.00 4.04
4708 5732 4.345257 ACTGATGGCATACTAAACCTCGAT 59.655 41.667 0.00 0.00 0.00 3.59
4709 5733 4.883083 TGATGGCATACTAAACCTCGATC 58.117 43.478 0.00 0.00 0.00 3.69
4710 5734 4.588951 TGATGGCATACTAAACCTCGATCT 59.411 41.667 0.00 0.00 0.00 2.75
4711 5735 4.585955 TGGCATACTAAACCTCGATCTC 57.414 45.455 0.00 0.00 0.00 2.75
4712 5736 4.215908 TGGCATACTAAACCTCGATCTCT 58.784 43.478 0.00 0.00 0.00 3.10
4713 5737 4.649674 TGGCATACTAAACCTCGATCTCTT 59.350 41.667 0.00 0.00 0.00 2.85
4714 5738 5.128827 TGGCATACTAAACCTCGATCTCTTT 59.871 40.000 0.00 0.00 0.00 2.52
4715 5739 5.463724 GGCATACTAAACCTCGATCTCTTTG 59.536 44.000 0.00 0.00 0.00 2.77
4716 5740 6.273825 GCATACTAAACCTCGATCTCTTTGA 58.726 40.000 0.00 0.00 0.00 2.69
4717 5741 6.926272 GCATACTAAACCTCGATCTCTTTGAT 59.074 38.462 0.00 0.00 38.27 2.57
4718 5742 7.439655 GCATACTAAACCTCGATCTCTTTGATT 59.560 37.037 0.00 0.00 35.14 2.57
4719 5743 8.973378 CATACTAAACCTCGATCTCTTTGATTC 58.027 37.037 0.00 0.00 35.14 2.52
4720 5744 7.176589 ACTAAACCTCGATCTCTTTGATTCT 57.823 36.000 0.00 0.00 35.14 2.40
4721 5745 7.616313 ACTAAACCTCGATCTCTTTGATTCTT 58.384 34.615 0.00 0.00 35.14 2.52
4722 5746 6.976636 AAACCTCGATCTCTTTGATTCTTC 57.023 37.500 0.00 0.00 35.14 2.87
4723 5747 5.017294 ACCTCGATCTCTTTGATTCTTCC 57.983 43.478 0.00 0.00 35.14 3.46
4724 5748 4.714308 ACCTCGATCTCTTTGATTCTTCCT 59.286 41.667 0.00 0.00 35.14 3.36
4725 5749 5.163457 ACCTCGATCTCTTTGATTCTTCCTC 60.163 44.000 0.00 0.00 35.14 3.71
4726 5750 4.926244 TCGATCTCTTTGATTCTTCCTCG 58.074 43.478 0.00 0.00 35.14 4.63
4727 5751 4.399618 TCGATCTCTTTGATTCTTCCTCGT 59.600 41.667 0.00 0.00 35.14 4.18
4728 5752 4.502282 CGATCTCTTTGATTCTTCCTCGTG 59.498 45.833 0.00 0.00 35.14 4.35
4729 5753 5.655488 GATCTCTTTGATTCTTCCTCGTGA 58.345 41.667 0.00 0.00 35.14 4.35
4730 5754 5.468540 TCTCTTTGATTCTTCCTCGTGAA 57.531 39.130 0.00 0.00 0.00 3.18
4731 5755 5.230942 TCTCTTTGATTCTTCCTCGTGAAC 58.769 41.667 0.00 0.00 0.00 3.18
4732 5756 3.987868 TCTTTGATTCTTCCTCGTGAACG 59.012 43.478 0.00 0.00 41.45 3.95
4733 5757 1.710013 TGATTCTTCCTCGTGAACGC 58.290 50.000 0.00 0.00 39.60 4.84
4734 5758 1.000394 TGATTCTTCCTCGTGAACGCA 60.000 47.619 0.00 0.00 39.60 5.24
4735 5759 2.066262 GATTCTTCCTCGTGAACGCAA 58.934 47.619 0.00 0.00 39.60 4.85
4736 5760 1.942677 TTCTTCCTCGTGAACGCAAA 58.057 45.000 0.00 0.00 39.60 3.68
4737 5761 1.942677 TCTTCCTCGTGAACGCAAAA 58.057 45.000 0.00 0.00 39.60 2.44
4738 5762 2.489971 TCTTCCTCGTGAACGCAAAAT 58.510 42.857 0.00 0.00 39.60 1.82
4739 5763 3.655486 TCTTCCTCGTGAACGCAAAATA 58.345 40.909 0.00 0.00 39.60 1.40
4740 5764 4.059511 TCTTCCTCGTGAACGCAAAATAA 58.940 39.130 0.00 0.00 39.60 1.40
4741 5765 4.151689 TCTTCCTCGTGAACGCAAAATAAG 59.848 41.667 0.00 0.00 39.60 1.73
4742 5766 2.739913 TCCTCGTGAACGCAAAATAAGG 59.260 45.455 0.00 0.00 39.60 2.69
4743 5767 2.505866 CTCGTGAACGCAAAATAAGGC 58.494 47.619 0.00 0.00 39.60 4.35
4744 5768 1.198178 TCGTGAACGCAAAATAAGGCC 59.802 47.619 0.00 0.00 39.60 5.19
4745 5769 1.199097 CGTGAACGCAAAATAAGGCCT 59.801 47.619 0.00 0.00 0.00 5.19
4746 5770 2.727916 CGTGAACGCAAAATAAGGCCTC 60.728 50.000 5.23 0.00 0.00 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 138 2.498726 CGAAGAGGAGGCAGAGGC 59.501 66.667 0.00 0.00 40.13 4.70
137 139 3.215245 CCGAAGAGGAGGCAGAGG 58.785 66.667 0.00 0.00 45.00 3.69
197 210 1.140804 GAGGCGGAGAAGCTGAGTC 59.859 63.158 0.00 0.00 37.29 3.36
198 211 0.902516 AAGAGGCGGAGAAGCTGAGT 60.903 55.000 0.00 0.00 37.29 3.41
199 212 0.248843 AAAGAGGCGGAGAAGCTGAG 59.751 55.000 0.00 0.00 37.29 3.35
200 213 0.687354 AAAAGAGGCGGAGAAGCTGA 59.313 50.000 0.00 0.00 37.29 4.26
201 214 2.386661 TAAAAGAGGCGGAGAAGCTG 57.613 50.000 0.00 0.00 37.29 4.24
202 215 2.615747 GGTTAAAAGAGGCGGAGAAGCT 60.616 50.000 0.00 0.00 37.29 3.74
203 216 1.738350 GGTTAAAAGAGGCGGAGAAGC 59.262 52.381 0.00 0.00 0.00 3.86
204 217 2.027100 AGGGTTAAAAGAGGCGGAGAAG 60.027 50.000 0.00 0.00 0.00 2.85
205 218 1.982958 AGGGTTAAAAGAGGCGGAGAA 59.017 47.619 0.00 0.00 0.00 2.87
206 219 1.652947 AGGGTTAAAAGAGGCGGAGA 58.347 50.000 0.00 0.00 0.00 3.71
207 220 2.488153 CAAAGGGTTAAAAGAGGCGGAG 59.512 50.000 0.00 0.00 0.00 4.63
300 313 4.564041 CAGATTAGATTGACGATCTGGGG 58.436 47.826 14.58 0.00 44.80 4.96
449 467 7.031975 ACTAAATTACTACTCCGTAGCACAAC 58.968 38.462 1.17 0.00 39.51 3.32
517 559 5.376854 ACAAAATTCTTCCAGAACATCCG 57.623 39.130 0.00 0.00 37.00 4.18
583 625 3.887621 TCTCTAGTTCCACAAATCCCG 57.112 47.619 0.00 0.00 0.00 5.14
857 910 4.472691 ACGAACATTCATTCACACACTG 57.527 40.909 0.00 0.00 0.00 3.66
858 911 5.499139 AAACGAACATTCATTCACACACT 57.501 34.783 0.00 0.00 0.00 3.55
867 920 6.016360 TCACATCTGGAAAAACGAACATTCAT 60.016 34.615 0.00 0.00 0.00 2.57
889 942 7.094377 ACAATAACACAGTCACCCAATAATCAC 60.094 37.037 0.00 0.00 0.00 3.06
890 943 6.945435 ACAATAACACAGTCACCCAATAATCA 59.055 34.615 0.00 0.00 0.00 2.57
891 944 7.391148 ACAATAACACAGTCACCCAATAATC 57.609 36.000 0.00 0.00 0.00 1.75
892 945 9.474313 AATACAATAACACAGTCACCCAATAAT 57.526 29.630 0.00 0.00 0.00 1.28
895 948 9.120538 GATAATACAATAACACAGTCACCCAAT 57.879 33.333 0.00 0.00 0.00 3.16
896 949 8.325787 AGATAATACAATAACACAGTCACCCAA 58.674 33.333 0.00 0.00 0.00 4.12
955 1008 1.486310 AGCCTGCATATGAGGAACGAA 59.514 47.619 19.48 0.00 31.48 3.85
956 1009 1.069204 GAGCCTGCATATGAGGAACGA 59.931 52.381 19.48 0.00 31.48 3.85
957 1010 1.202568 TGAGCCTGCATATGAGGAACG 60.203 52.381 19.48 0.00 31.48 3.95
974 1027 6.461092 GGACAAGAAGGTTAAACCCTTTTGAG 60.461 42.308 17.14 6.64 44.91 3.02
1112 1166 0.039978 CTATGGCTAGTCGGCGACAG 60.040 60.000 37.71 30.46 42.02 3.51
1198 1252 3.065786 TGATAACGAAGGCACGTACTAGG 59.934 47.826 9.79 0.00 45.83 3.02
1248 1302 5.761234 TGGTATGTCCAAAACTGTAACTGAC 59.239 40.000 0.00 0.00 44.12 3.51
1327 1381 4.445452 AGAACCATGCAACATGATTCAC 57.555 40.909 15.28 0.00 0.00 3.18
1378 1432 1.567504 CACGGTAACCATAGCCTTCG 58.432 55.000 0.00 0.00 0.00 3.79
1632 1691 8.674263 TTGCAACTCCAAATTTACAATTCATT 57.326 26.923 0.00 0.00 0.00 2.57
1636 1695 7.452562 AGGATTGCAACTCCAAATTTACAATT 58.547 30.769 22.09 0.00 35.08 2.32
1637 1696 7.008021 AGGATTGCAACTCCAAATTTACAAT 57.992 32.000 22.09 0.00 35.08 2.71
1678 1737 6.285990 TGGTACTGACTTGGAACTAGAAAAC 58.714 40.000 0.00 0.00 0.00 2.43
1689 1748 6.627395 TTGTTTGTATTGGTACTGACTTGG 57.373 37.500 0.00 0.00 0.00 3.61
1729 1788 3.616219 TGGAAGTGGGTAATGCATACAC 58.384 45.455 0.00 7.59 38.49 2.90
1759 1828 3.857549 ATACCGATCTCACATGATCCG 57.142 47.619 0.00 0.00 39.57 4.18
1827 1896 3.418684 TTCCTTAACCAGACAGAAGCC 57.581 47.619 0.00 0.00 0.00 4.35
1868 1937 4.516698 TGAGAAGGAGAACAAAGAACATGC 59.483 41.667 0.00 0.00 0.00 4.06
1886 1955 5.449041 GCTGACAATCAAACACAGTTGAGAA 60.449 40.000 0.00 0.00 40.72 2.87
1925 1994 5.586643 GGAACAGAAAGGGTCATAATCAGAC 59.413 44.000 0.00 0.00 35.29 3.51
2009 2080 7.042658 GCGGGTATTTAGTTACTGAGAAATCAG 60.043 40.741 3.76 3.76 43.03 2.90
2601 3416 7.050377 GGGAGTTAGTTTGATTGAGATGATGA 58.950 38.462 0.00 0.00 0.00 2.92
2798 3613 4.371786 CAAAGAAGTTCCCAAGGAAAAGC 58.628 43.478 0.00 0.00 43.86 3.51
2864 3679 4.950475 TCTCACACTACTCATACCAGGAAG 59.050 45.833 0.00 0.00 0.00 3.46
2937 3783 3.391049 ACAAGAGTAGTTCCGCAAAGTC 58.609 45.455 0.00 0.00 0.00 3.01
3317 4288 3.272574 TCCAGATCTTTAGCAGGCTTG 57.727 47.619 0.00 0.00 0.00 4.01
3402 4373 0.976641 GTGATCTGTGGTGTGGAGGA 59.023 55.000 0.00 0.00 0.00 3.71
3515 4486 3.140707 TCAATATGGGGCCATCACAAGAT 59.859 43.478 4.39 0.00 37.82 2.40
3540 4511 2.683968 TGTCACGGTTACTCATTGAGC 58.316 47.619 13.64 0.00 32.04 4.26
3544 4515 3.682858 CGGAAATGTCACGGTTACTCATT 59.317 43.478 0.00 0.00 0.00 2.57
3554 4525 4.404507 AATGACTTTCGGAAATGTCACG 57.595 40.909 24.55 9.55 46.30 4.35
3683 4655 0.966920 TCGGCTCTTCTTTCTTCGGT 59.033 50.000 0.00 0.00 0.00 4.69
3734 4706 4.202567 ACTCTGGCTATTCAACCCTTCAAA 60.203 41.667 0.00 0.00 0.00 2.69
3781 4753 6.711277 ACTCTTAGCCTTGATGATGTTTGTA 58.289 36.000 0.00 0.00 0.00 2.41
3795 4767 1.190643 GCTGACTGGACTCTTAGCCT 58.809 55.000 0.00 0.00 0.00 4.58
3839 4811 1.078214 CGAAAGATGCCCAGCTCCA 60.078 57.895 0.00 0.00 0.00 3.86
3869 4842 6.920569 TCACAGTTTACAGAAAAGAAGGAC 57.079 37.500 0.00 0.00 0.00 3.85
3871 4844 6.712547 AGGATCACAGTTTACAGAAAAGAAGG 59.287 38.462 0.00 0.00 0.00 3.46
3884 4857 4.265073 GGCTGACATAAGGATCACAGTTT 58.735 43.478 0.00 0.00 0.00 2.66
3995 4968 3.678056 CTGGTGTAGGAACTAACAGCA 57.322 47.619 7.09 7.09 45.48 4.41
4022 4995 9.831737 CAAACAAGAAAAGTATGATCAACTAGG 57.168 33.333 0.00 0.00 0.00 3.02
4117 5139 6.743575 AGCTAAATCATTGTAACTGTCACC 57.256 37.500 0.00 0.00 0.00 4.02
4160 5182 9.803315 GTTTCCTTTCTTGGGATTATGTATTTC 57.197 33.333 0.00 0.00 32.41 2.17
4163 5185 7.418378 TGGTTTCCTTTCTTGGGATTATGTAT 58.582 34.615 0.00 0.00 32.41 2.29
4250 5272 1.952296 CACCATTGGATAAGCTCTGGC 59.048 52.381 10.37 0.00 39.06 4.85
4254 5276 3.549794 AGAAGCACCATTGGATAAGCTC 58.450 45.455 10.37 7.36 0.00 4.09
4294 5318 1.424403 TCAACCTATCGTGTGCGTTG 58.576 50.000 0.00 0.00 39.49 4.10
4297 5321 1.990799 TCTTCAACCTATCGTGTGCG 58.009 50.000 0.00 0.00 39.92 5.34
4323 5347 1.197910 GATGCTAAGGACGTGCGTAC 58.802 55.000 0.00 0.00 0.00 3.67
4326 5350 1.065701 AGTAGATGCTAAGGACGTGCG 59.934 52.381 0.00 0.00 0.00 5.34
4346 5370 5.677319 CAACCTATGTTGGAAGAGAGGTA 57.323 43.478 3.49 0.00 42.32 3.08
4347 5371 4.559862 CAACCTATGTTGGAAGAGAGGT 57.440 45.455 3.15 0.00 44.68 3.85
4364 5388 4.567159 CGCAAGTAGGTTAGATCTTCAACC 59.433 45.833 16.68 16.68 43.82 3.77
4365 5389 5.704217 CGCAAGTAGGTTAGATCTTCAAC 57.296 43.478 0.00 0.00 0.00 3.18
4382 5406 3.444703 AGTAGATGCTAAGGACGCAAG 57.555 47.619 0.00 0.00 41.26 4.01
4383 5407 3.067742 GGTAGTAGATGCTAAGGACGCAA 59.932 47.826 0.00 0.00 41.26 4.85
4384 5408 2.621998 GGTAGTAGATGCTAAGGACGCA 59.378 50.000 0.00 0.00 42.25 5.24
4385 5409 2.885894 AGGTAGTAGATGCTAAGGACGC 59.114 50.000 0.00 0.00 0.00 5.19
4386 5410 4.214545 CAGAGGTAGTAGATGCTAAGGACG 59.785 50.000 0.00 0.00 0.00 4.79
4387 5411 5.134661 ACAGAGGTAGTAGATGCTAAGGAC 58.865 45.833 0.00 0.00 0.00 3.85
4388 5412 5.390087 ACAGAGGTAGTAGATGCTAAGGA 57.610 43.478 0.00 0.00 0.00 3.36
4389 5413 5.010213 GGAACAGAGGTAGTAGATGCTAAGG 59.990 48.000 0.00 0.00 0.00 2.69
4390 5414 5.594725 TGGAACAGAGGTAGTAGATGCTAAG 59.405 44.000 0.00 0.00 0.00 2.18
4391 5415 5.516044 TGGAACAGAGGTAGTAGATGCTAA 58.484 41.667 0.00 0.00 0.00 3.09
4392 5416 5.125367 TGGAACAGAGGTAGTAGATGCTA 57.875 43.478 0.00 0.00 0.00 3.49
4393 5417 3.982516 TGGAACAGAGGTAGTAGATGCT 58.017 45.455 0.00 0.00 0.00 3.79
4394 5418 4.737855 TTGGAACAGAGGTAGTAGATGC 57.262 45.455 0.00 0.00 42.39 3.91
4420 5444 9.720769 GCTAGTTTAGCCTACCAAAATATCATA 57.279 33.333 0.00 0.00 45.95 2.15
4421 5445 8.622948 GCTAGTTTAGCCTACCAAAATATCAT 57.377 34.615 0.00 0.00 45.95 2.45
4437 5461 5.507077 TGACGTTTTTGCAAGCTAGTTTAG 58.493 37.500 0.00 0.00 0.00 1.85
4438 5462 5.487153 TGACGTTTTTGCAAGCTAGTTTA 57.513 34.783 0.00 0.00 0.00 2.01
4439 5463 4.364415 TGACGTTTTTGCAAGCTAGTTT 57.636 36.364 0.00 0.00 0.00 2.66
4440 5464 4.568152 ATGACGTTTTTGCAAGCTAGTT 57.432 36.364 0.00 0.00 0.00 2.24
4441 5465 5.880054 ATATGACGTTTTTGCAAGCTAGT 57.120 34.783 0.00 0.00 0.00 2.57
4442 5466 8.841444 AAATATATGACGTTTTTGCAAGCTAG 57.159 30.769 0.00 0.00 0.00 3.42
4443 5467 9.071221 CAAAATATATGACGTTTTTGCAAGCTA 57.929 29.630 0.00 0.00 33.75 3.32
4444 5468 7.063308 CCAAAATATATGACGTTTTTGCAAGCT 59.937 33.333 13.03 0.00 37.60 3.74
4445 5469 7.062839 TCCAAAATATATGACGTTTTTGCAAGC 59.937 33.333 13.03 0.00 37.60 4.01
4446 5470 8.459521 TCCAAAATATATGACGTTTTTGCAAG 57.540 30.769 13.03 3.54 37.60 4.01
4447 5471 8.704234 GTTCCAAAATATATGACGTTTTTGCAA 58.296 29.630 13.03 0.00 37.60 4.08
4448 5472 7.061210 CGTTCCAAAATATATGACGTTTTTGCA 59.939 33.333 13.03 0.00 37.60 4.08
4449 5473 7.380320 CGTTCCAAAATATATGACGTTTTTGC 58.620 34.615 13.03 2.71 37.60 3.68
4450 5474 7.061210 TGCGTTCCAAAATATATGACGTTTTTG 59.939 33.333 11.96 11.96 38.28 2.44
4451 5475 7.085116 TGCGTTCCAAAATATATGACGTTTTT 58.915 30.769 0.00 0.00 0.00 1.94
4452 5476 6.613233 TGCGTTCCAAAATATATGACGTTTT 58.387 32.000 0.00 0.00 0.00 2.43
4453 5477 6.184580 TGCGTTCCAAAATATATGACGTTT 57.815 33.333 0.00 0.00 0.00 3.60
4454 5478 5.220777 CCTGCGTTCCAAAATATATGACGTT 60.221 40.000 0.00 0.00 0.00 3.99
4455 5479 4.272504 CCTGCGTTCCAAAATATATGACGT 59.727 41.667 0.00 0.00 0.00 4.34
4456 5480 4.272504 ACCTGCGTTCCAAAATATATGACG 59.727 41.667 0.00 0.00 0.00 4.35
4457 5481 5.295787 TCACCTGCGTTCCAAAATATATGAC 59.704 40.000 0.00 0.00 0.00 3.06
4458 5482 5.432645 TCACCTGCGTTCCAAAATATATGA 58.567 37.500 0.00 0.00 0.00 2.15
4459 5483 5.749596 TCACCTGCGTTCCAAAATATATG 57.250 39.130 0.00 0.00 0.00 1.78
4460 5484 6.995686 TGTATCACCTGCGTTCCAAAATATAT 59.004 34.615 0.00 0.00 0.00 0.86
4461 5485 6.350103 TGTATCACCTGCGTTCCAAAATATA 58.650 36.000 0.00 0.00 0.00 0.86
4462 5486 5.189928 TGTATCACCTGCGTTCCAAAATAT 58.810 37.500 0.00 0.00 0.00 1.28
4463 5487 4.580868 TGTATCACCTGCGTTCCAAAATA 58.419 39.130 0.00 0.00 0.00 1.40
4464 5488 3.417101 TGTATCACCTGCGTTCCAAAAT 58.583 40.909 0.00 0.00 0.00 1.82
4465 5489 2.852449 TGTATCACCTGCGTTCCAAAA 58.148 42.857 0.00 0.00 0.00 2.44
4466 5490 2.552599 TGTATCACCTGCGTTCCAAA 57.447 45.000 0.00 0.00 0.00 3.28
4467 5491 2.552599 TTGTATCACCTGCGTTCCAA 57.447 45.000 0.00 0.00 0.00 3.53
4468 5492 2.027653 TGATTGTATCACCTGCGTTCCA 60.028 45.455 0.00 0.00 33.59 3.53
4469 5493 2.609459 CTGATTGTATCACCTGCGTTCC 59.391 50.000 0.00 0.00 35.06 3.62
4470 5494 3.521560 TCTGATTGTATCACCTGCGTTC 58.478 45.455 0.00 0.00 35.06 3.95
4471 5495 3.610040 TCTGATTGTATCACCTGCGTT 57.390 42.857 0.00 0.00 35.06 4.84
4472 5496 3.827008 ATCTGATTGTATCACCTGCGT 57.173 42.857 0.00 0.00 35.06 5.24
4473 5497 6.533012 CCTTATATCTGATTGTATCACCTGCG 59.467 42.308 0.00 0.00 35.06 5.18
4474 5498 7.390027 ACCTTATATCTGATTGTATCACCTGC 58.610 38.462 0.00 0.00 35.06 4.85
4483 5507 9.213777 TCCACTTTCTACCTTATATCTGATTGT 57.786 33.333 0.00 0.00 0.00 2.71
4486 5510 8.875168 CCTTCCACTTTCTACCTTATATCTGAT 58.125 37.037 0.00 0.00 0.00 2.90
4487 5511 8.065627 TCCTTCCACTTTCTACCTTATATCTGA 58.934 37.037 0.00 0.00 0.00 3.27
4488 5512 8.251383 TCCTTCCACTTTCTACCTTATATCTG 57.749 38.462 0.00 0.00 0.00 2.90
4489 5513 8.706521 GTTCCTTCCACTTTCTACCTTATATCT 58.293 37.037 0.00 0.00 0.00 1.98
4490 5514 7.652507 CGTTCCTTCCACTTTCTACCTTATATC 59.347 40.741 0.00 0.00 0.00 1.63
4491 5515 7.498443 CGTTCCTTCCACTTTCTACCTTATAT 58.502 38.462 0.00 0.00 0.00 0.86
4492 5516 6.628844 GCGTTCCTTCCACTTTCTACCTTATA 60.629 42.308 0.00 0.00 0.00 0.98
4493 5517 5.731591 CGTTCCTTCCACTTTCTACCTTAT 58.268 41.667 0.00 0.00 0.00 1.73
4494 5518 4.562143 GCGTTCCTTCCACTTTCTACCTTA 60.562 45.833 0.00 0.00 0.00 2.69
4495 5519 3.806157 GCGTTCCTTCCACTTTCTACCTT 60.806 47.826 0.00 0.00 0.00 3.50
4496 5520 2.289506 GCGTTCCTTCCACTTTCTACCT 60.290 50.000 0.00 0.00 0.00 3.08
4497 5521 2.074576 GCGTTCCTTCCACTTTCTACC 58.925 52.381 0.00 0.00 0.00 3.18
4498 5522 2.737252 CTGCGTTCCTTCCACTTTCTAC 59.263 50.000 0.00 0.00 0.00 2.59
4499 5523 2.289444 CCTGCGTTCCTTCCACTTTCTA 60.289 50.000 0.00 0.00 0.00 2.10
4500 5524 1.543429 CCTGCGTTCCTTCCACTTTCT 60.543 52.381 0.00 0.00 0.00 2.52
4501 5525 0.875059 CCTGCGTTCCTTCCACTTTC 59.125 55.000 0.00 0.00 0.00 2.62
4502 5526 0.182775 ACCTGCGTTCCTTCCACTTT 59.817 50.000 0.00 0.00 0.00 2.66
4503 5527 0.535102 CACCTGCGTTCCTTCCACTT 60.535 55.000 0.00 0.00 0.00 3.16
4504 5528 1.071471 CACCTGCGTTCCTTCCACT 59.929 57.895 0.00 0.00 0.00 4.00
4505 5529 0.321653 ATCACCTGCGTTCCTTCCAC 60.322 55.000 0.00 0.00 0.00 4.02
4506 5530 1.066430 GTATCACCTGCGTTCCTTCCA 60.066 52.381 0.00 0.00 0.00 3.53
4507 5531 1.066430 TGTATCACCTGCGTTCCTTCC 60.066 52.381 0.00 0.00 0.00 3.46
4508 5532 2.380084 TGTATCACCTGCGTTCCTTC 57.620 50.000 0.00 0.00 0.00 3.46
4509 5533 2.851263 TTGTATCACCTGCGTTCCTT 57.149 45.000 0.00 0.00 0.00 3.36
4510 5534 2.236146 TGATTGTATCACCTGCGTTCCT 59.764 45.455 0.00 0.00 33.59 3.36
4511 5535 2.609459 CTGATTGTATCACCTGCGTTCC 59.391 50.000 0.00 0.00 35.06 3.62
4512 5536 3.521560 TCTGATTGTATCACCTGCGTTC 58.478 45.455 0.00 0.00 35.06 3.95
4513 5537 3.610040 TCTGATTGTATCACCTGCGTT 57.390 42.857 0.00 0.00 35.06 4.84
4514 5538 3.827008 ATCTGATTGTATCACCTGCGT 57.173 42.857 0.00 0.00 35.06 5.24
4515 5539 6.533012 CCTTATATCTGATTGTATCACCTGCG 59.467 42.308 0.00 0.00 35.06 5.18
4516 5540 7.390027 ACCTTATATCTGATTGTATCACCTGC 58.610 38.462 0.00 0.00 35.06 4.85
4525 5549 9.213777 TCCACTTTCTACCTTATATCTGATTGT 57.786 33.333 0.00 0.00 0.00 2.71
4528 5552 8.361139 CGTTCCACTTTCTACCTTATATCTGAT 58.639 37.037 0.00 0.00 0.00 2.90
4529 5553 7.201884 CCGTTCCACTTTCTACCTTATATCTGA 60.202 40.741 0.00 0.00 0.00 3.27
4530 5554 6.924060 CCGTTCCACTTTCTACCTTATATCTG 59.076 42.308 0.00 0.00 0.00 2.90
4531 5555 6.610425 ACCGTTCCACTTTCTACCTTATATCT 59.390 38.462 0.00 0.00 0.00 1.98
4532 5556 6.814043 ACCGTTCCACTTTCTACCTTATATC 58.186 40.000 0.00 0.00 0.00 1.63
4533 5557 6.803366 ACCGTTCCACTTTCTACCTTATAT 57.197 37.500 0.00 0.00 0.00 0.86
4534 5558 7.014615 GGATACCGTTCCACTTTCTACCTTATA 59.985 40.741 0.00 0.00 35.72 0.98
4535 5559 6.183360 GGATACCGTTCCACTTTCTACCTTAT 60.183 42.308 0.00 0.00 35.72 1.73
4536 5560 5.127682 GGATACCGTTCCACTTTCTACCTTA 59.872 44.000 0.00 0.00 35.72 2.69
4537 5561 4.081254 GGATACCGTTCCACTTTCTACCTT 60.081 45.833 0.00 0.00 35.72 3.50
4538 5562 3.450096 GGATACCGTTCCACTTTCTACCT 59.550 47.826 0.00 0.00 35.72 3.08
4539 5563 3.196254 TGGATACCGTTCCACTTTCTACC 59.804 47.826 0.00 0.00 40.90 3.18
4540 5564 4.460948 TGGATACCGTTCCACTTTCTAC 57.539 45.455 0.00 0.00 40.90 2.59
4541 5565 4.618927 CGTTGGATACCGTTCCACTTTCTA 60.619 45.833 0.00 0.00 45.42 2.10
4542 5566 3.671716 GTTGGATACCGTTCCACTTTCT 58.328 45.455 0.00 0.00 45.42 2.52
4543 5567 2.414138 CGTTGGATACCGTTCCACTTTC 59.586 50.000 0.00 0.00 45.42 2.62
4544 5568 2.037511 TCGTTGGATACCGTTCCACTTT 59.962 45.455 0.00 0.00 45.42 2.66
4545 5569 1.619827 TCGTTGGATACCGTTCCACTT 59.380 47.619 0.00 0.00 45.42 3.16
4546 5570 1.259609 TCGTTGGATACCGTTCCACT 58.740 50.000 0.00 0.00 45.42 4.00
4547 5571 1.997606 CTTCGTTGGATACCGTTCCAC 59.002 52.381 0.00 0.00 45.42 4.02
4548 5572 1.673626 GCTTCGTTGGATACCGTTCCA 60.674 52.381 0.00 0.00 44.08 3.53
4549 5573 1.004595 GCTTCGTTGGATACCGTTCC 58.995 55.000 0.00 0.00 36.24 3.62
4550 5574 1.004595 GGCTTCGTTGGATACCGTTC 58.995 55.000 0.00 0.00 0.00 3.95
4551 5575 0.322322 TGGCTTCGTTGGATACCGTT 59.678 50.000 0.00 0.00 0.00 4.44
4552 5576 0.108329 CTGGCTTCGTTGGATACCGT 60.108 55.000 0.00 0.00 0.00 4.83
4553 5577 0.174845 TCTGGCTTCGTTGGATACCG 59.825 55.000 0.00 0.00 0.00 4.02
4554 5578 2.396590 TTCTGGCTTCGTTGGATACC 57.603 50.000 0.00 0.00 0.00 2.73
4555 5579 3.127030 CCTTTTCTGGCTTCGTTGGATAC 59.873 47.826 0.00 0.00 0.00 2.24
4556 5580 3.343617 CCTTTTCTGGCTTCGTTGGATA 58.656 45.455 0.00 0.00 0.00 2.59
4557 5581 2.162681 CCTTTTCTGGCTTCGTTGGAT 58.837 47.619 0.00 0.00 0.00 3.41
4558 5582 1.604604 CCTTTTCTGGCTTCGTTGGA 58.395 50.000 0.00 0.00 0.00 3.53
4568 5592 3.118811 TGTTTTGGAGTTGCCTTTTCTGG 60.119 43.478 0.00 0.00 37.63 3.86
4569 5593 3.865164 GTGTTTTGGAGTTGCCTTTTCTG 59.135 43.478 0.00 0.00 37.63 3.02
4570 5594 3.513515 TGTGTTTTGGAGTTGCCTTTTCT 59.486 39.130 0.00 0.00 37.63 2.52
4571 5595 3.855858 TGTGTTTTGGAGTTGCCTTTTC 58.144 40.909 0.00 0.00 37.63 2.29
4572 5596 3.971245 TGTGTTTTGGAGTTGCCTTTT 57.029 38.095 0.00 0.00 37.63 2.27
4573 5597 3.971245 TTGTGTTTTGGAGTTGCCTTT 57.029 38.095 0.00 0.00 37.63 3.11
4574 5598 3.181466 GGATTGTGTTTTGGAGTTGCCTT 60.181 43.478 0.00 0.00 37.63 4.35
4575 5599 2.365293 GGATTGTGTTTTGGAGTTGCCT 59.635 45.455 0.00 0.00 37.63 4.75
4576 5600 2.365293 AGGATTGTGTTTTGGAGTTGCC 59.635 45.455 0.00 0.00 37.10 4.52
4577 5601 3.733443 AGGATTGTGTTTTGGAGTTGC 57.267 42.857 0.00 0.00 0.00 4.17
4592 5616 6.375455 AGTCACAAATAATTCGAGCAAGGATT 59.625 34.615 0.00 0.00 0.00 3.01
4593 5617 5.882557 AGTCACAAATAATTCGAGCAAGGAT 59.117 36.000 0.00 0.00 0.00 3.24
4594 5618 5.245531 AGTCACAAATAATTCGAGCAAGGA 58.754 37.500 0.00 0.00 0.00 3.36
4595 5619 5.551760 AGTCACAAATAATTCGAGCAAGG 57.448 39.130 0.00 0.00 0.00 3.61
4596 5620 5.796935 CCAAGTCACAAATAATTCGAGCAAG 59.203 40.000 0.00 0.00 0.00 4.01
4597 5621 5.471797 TCCAAGTCACAAATAATTCGAGCAA 59.528 36.000 0.00 0.00 0.00 3.91
4598 5622 5.000591 TCCAAGTCACAAATAATTCGAGCA 58.999 37.500 0.00 0.00 0.00 4.26
4599 5623 5.545658 TCCAAGTCACAAATAATTCGAGC 57.454 39.130 0.00 0.00 0.00 5.03
4600 5624 5.122239 TGCTCCAAGTCACAAATAATTCGAG 59.878 40.000 0.00 0.00 0.00 4.04
4601 5625 5.000591 TGCTCCAAGTCACAAATAATTCGA 58.999 37.500 0.00 0.00 0.00 3.71
4602 5626 5.295431 TGCTCCAAGTCACAAATAATTCG 57.705 39.130 0.00 0.00 0.00 3.34
4603 5627 5.569059 CGTTGCTCCAAGTCACAAATAATTC 59.431 40.000 0.00 0.00 0.00 2.17
4604 5628 5.460646 CGTTGCTCCAAGTCACAAATAATT 58.539 37.500 0.00 0.00 0.00 1.40
4605 5629 4.615912 GCGTTGCTCCAAGTCACAAATAAT 60.616 41.667 0.00 0.00 0.00 1.28
4606 5630 3.304391 GCGTTGCTCCAAGTCACAAATAA 60.304 43.478 0.00 0.00 0.00 1.40
4607 5631 2.225491 GCGTTGCTCCAAGTCACAAATA 59.775 45.455 0.00 0.00 0.00 1.40
4608 5632 1.001378 GCGTTGCTCCAAGTCACAAAT 60.001 47.619 0.00 0.00 0.00 2.32
4609 5633 0.380378 GCGTTGCTCCAAGTCACAAA 59.620 50.000 0.00 0.00 0.00 2.83
4610 5634 0.463654 AGCGTTGCTCCAAGTCACAA 60.464 50.000 0.00 0.00 30.62 3.33
4611 5635 1.146041 AGCGTTGCTCCAAGTCACA 59.854 52.632 0.00 0.00 30.62 3.58
4612 5636 1.160329 ACAGCGTTGCTCCAAGTCAC 61.160 55.000 0.00 0.00 36.40 3.67
4613 5637 1.146041 ACAGCGTTGCTCCAAGTCA 59.854 52.632 0.00 0.00 36.40 3.41
4614 5638 0.880278 TCACAGCGTTGCTCCAAGTC 60.880 55.000 0.00 0.00 36.40 3.01
4615 5639 0.463654 TTCACAGCGTTGCTCCAAGT 60.464 50.000 0.00 0.00 36.40 3.16
4616 5640 0.662619 TTTCACAGCGTTGCTCCAAG 59.337 50.000 0.00 0.00 36.40 3.61
4617 5641 1.098869 TTTTCACAGCGTTGCTCCAA 58.901 45.000 0.00 0.00 36.40 3.53
4618 5642 0.380378 GTTTTCACAGCGTTGCTCCA 59.620 50.000 0.00 0.00 36.40 3.86
4619 5643 0.380378 TGTTTTCACAGCGTTGCTCC 59.620 50.000 0.00 0.00 36.40 4.70
4620 5644 2.405892 ATGTTTTCACAGCGTTGCTC 57.594 45.000 0.00 0.00 36.40 4.26
4621 5645 2.098934 TCAATGTTTTCACAGCGTTGCT 59.901 40.909 0.00 0.00 40.77 3.91
4622 5646 2.458951 TCAATGTTTTCACAGCGTTGC 58.541 42.857 0.00 0.00 35.94 4.17
4623 5647 2.468777 GCTCAATGTTTTCACAGCGTTG 59.531 45.455 0.00 0.00 35.94 4.10
4624 5648 2.098934 TGCTCAATGTTTTCACAGCGTT 59.901 40.909 0.00 0.00 35.94 4.84
4625 5649 1.675483 TGCTCAATGTTTTCACAGCGT 59.325 42.857 0.00 0.00 35.94 5.07
4626 5650 2.313234 CTGCTCAATGTTTTCACAGCG 58.687 47.619 0.00 0.00 35.94 5.18
4627 5651 2.056577 GCTGCTCAATGTTTTCACAGC 58.943 47.619 0.00 0.00 37.61 4.40
4628 5652 3.305964 CAGCTGCTCAATGTTTTCACAG 58.694 45.455 0.00 0.00 35.94 3.66
4629 5653 2.544277 GCAGCTGCTCAATGTTTTCACA 60.544 45.455 31.33 0.00 38.21 3.58
4630 5654 2.056577 GCAGCTGCTCAATGTTTTCAC 58.943 47.619 31.33 0.00 38.21 3.18
4631 5655 1.682323 TGCAGCTGCTCAATGTTTTCA 59.318 42.857 36.61 11.53 42.66 2.69
4632 5656 2.427232 TGCAGCTGCTCAATGTTTTC 57.573 45.000 36.61 6.43 42.66 2.29
4633 5657 2.353406 GGATGCAGCTGCTCAATGTTTT 60.353 45.455 36.61 11.88 42.66 2.43
4634 5658 1.203994 GGATGCAGCTGCTCAATGTTT 59.796 47.619 36.61 12.88 42.66 2.83
4635 5659 0.815734 GGATGCAGCTGCTCAATGTT 59.184 50.000 36.61 14.21 42.66 2.71
4636 5660 0.034380 AGGATGCAGCTGCTCAATGT 60.034 50.000 36.61 16.84 42.66 2.71
4637 5661 1.963172 TAGGATGCAGCTGCTCAATG 58.037 50.000 36.61 0.70 42.66 2.82
4638 5662 2.723322 TTAGGATGCAGCTGCTCAAT 57.277 45.000 36.61 23.59 42.66 2.57
4639 5663 2.092807 TGATTAGGATGCAGCTGCTCAA 60.093 45.455 36.61 22.51 42.66 3.02
4640 5664 1.487558 TGATTAGGATGCAGCTGCTCA 59.512 47.619 36.61 26.56 42.66 4.26
4641 5665 2.251409 TGATTAGGATGCAGCTGCTC 57.749 50.000 36.61 28.58 42.66 4.26
4642 5666 2.953284 ATGATTAGGATGCAGCTGCT 57.047 45.000 36.61 23.26 42.66 4.24
4643 5667 3.672808 ACTATGATTAGGATGCAGCTGC 58.327 45.455 31.89 31.89 42.50 5.25
4644 5668 5.049612 CACAACTATGATTAGGATGCAGCTG 60.050 44.000 10.11 10.11 0.00 4.24
4645 5669 5.061853 CACAACTATGATTAGGATGCAGCT 58.938 41.667 0.22 0.00 0.00 4.24
4646 5670 4.320057 GCACAACTATGATTAGGATGCAGC 60.320 45.833 0.00 0.00 34.41 5.25
4647 5671 5.061853 AGCACAACTATGATTAGGATGCAG 58.938 41.667 0.00 0.00 35.64 4.41
4648 5672 5.039920 AGCACAACTATGATTAGGATGCA 57.960 39.130 0.00 0.00 35.64 3.96
4649 5673 5.178996 CAGAGCACAACTATGATTAGGATGC 59.821 44.000 0.00 0.00 40.18 3.91
4650 5674 6.286758 ACAGAGCACAACTATGATTAGGATG 58.713 40.000 0.00 0.00 40.18 3.51
4651 5675 6.491714 ACAGAGCACAACTATGATTAGGAT 57.508 37.500 0.00 0.00 40.18 3.24
4652 5676 5.939764 ACAGAGCACAACTATGATTAGGA 57.060 39.130 0.00 0.00 40.18 2.94
4653 5677 6.992063 AAACAGAGCACAACTATGATTAGG 57.008 37.500 0.00 0.00 40.18 2.69
4654 5678 7.148573 ACGAAAACAGAGCACAACTATGATTAG 60.149 37.037 0.00 0.00 40.18 1.73
4655 5679 6.649141 ACGAAAACAGAGCACAACTATGATTA 59.351 34.615 0.00 0.00 40.18 1.75
4656 5680 5.470098 ACGAAAACAGAGCACAACTATGATT 59.530 36.000 0.00 0.00 40.18 2.57
4657 5681 4.997395 ACGAAAACAGAGCACAACTATGAT 59.003 37.500 0.00 0.00 40.18 2.45
4658 5682 4.377021 ACGAAAACAGAGCACAACTATGA 58.623 39.130 0.00 0.00 40.18 2.15
4659 5683 4.732285 ACGAAAACAGAGCACAACTATG 57.268 40.909 0.00 0.00 43.53 2.23
4660 5684 4.084537 CGAACGAAAACAGAGCACAACTAT 60.085 41.667 0.00 0.00 0.00 2.12
4661 5685 3.244345 CGAACGAAAACAGAGCACAACTA 59.756 43.478 0.00 0.00 0.00 2.24
4662 5686 2.030457 CGAACGAAAACAGAGCACAACT 59.970 45.455 0.00 0.00 0.00 3.16
4663 5687 2.363220 CGAACGAAAACAGAGCACAAC 58.637 47.619 0.00 0.00 0.00 3.32
4664 5688 1.267832 GCGAACGAAAACAGAGCACAA 60.268 47.619 0.00 0.00 0.00 3.33
4665 5689 0.303493 GCGAACGAAAACAGAGCACA 59.697 50.000 0.00 0.00 0.00 4.57
4666 5690 0.303493 TGCGAACGAAAACAGAGCAC 59.697 50.000 0.00 0.00 0.00 4.40
4667 5691 0.303493 GTGCGAACGAAAACAGAGCA 59.697 50.000 0.00 0.00 0.00 4.26
4668 5692 0.582005 AGTGCGAACGAAAACAGAGC 59.418 50.000 0.00 0.00 0.00 4.09
4669 5693 1.858458 TCAGTGCGAACGAAAACAGAG 59.142 47.619 0.00 0.00 0.00 3.35
4670 5694 1.929230 TCAGTGCGAACGAAAACAGA 58.071 45.000 0.00 0.00 0.00 3.41
4671 5695 2.563976 CATCAGTGCGAACGAAAACAG 58.436 47.619 0.00 0.00 0.00 3.16
4672 5696 1.262950 CCATCAGTGCGAACGAAAACA 59.737 47.619 0.00 0.00 0.00 2.83
4673 5697 1.950472 CCATCAGTGCGAACGAAAAC 58.050 50.000 0.00 0.00 0.00 2.43
4674 5698 0.237235 GCCATCAGTGCGAACGAAAA 59.763 50.000 0.00 0.00 0.00 2.29
4675 5699 0.882484 TGCCATCAGTGCGAACGAAA 60.882 50.000 0.00 0.00 0.00 3.46
4676 5700 0.673333 ATGCCATCAGTGCGAACGAA 60.673 50.000 0.00 0.00 0.00 3.85
4677 5701 0.174617 TATGCCATCAGTGCGAACGA 59.825 50.000 0.00 0.00 0.00 3.85
4678 5702 0.301687 GTATGCCATCAGTGCGAACG 59.698 55.000 0.00 0.00 0.00 3.95
4679 5703 1.656652 AGTATGCCATCAGTGCGAAC 58.343 50.000 0.00 0.00 0.00 3.95
4680 5704 3.535280 TTAGTATGCCATCAGTGCGAA 57.465 42.857 0.00 0.00 0.00 4.70
4681 5705 3.194861 GTTTAGTATGCCATCAGTGCGA 58.805 45.455 0.00 0.00 0.00 5.10
4682 5706 2.287915 GGTTTAGTATGCCATCAGTGCG 59.712 50.000 0.00 0.00 0.00 5.34
4683 5707 3.545703 AGGTTTAGTATGCCATCAGTGC 58.454 45.455 0.00 0.00 0.00 4.40
4684 5708 3.804325 CGAGGTTTAGTATGCCATCAGTG 59.196 47.826 0.00 0.00 0.00 3.66
4685 5709 3.704566 TCGAGGTTTAGTATGCCATCAGT 59.295 43.478 0.00 0.00 0.00 3.41
4686 5710 4.322080 TCGAGGTTTAGTATGCCATCAG 57.678 45.455 0.00 0.00 0.00 2.90
4687 5711 4.588951 AGATCGAGGTTTAGTATGCCATCA 59.411 41.667 0.00 0.00 0.00 3.07
4688 5712 5.047660 AGAGATCGAGGTTTAGTATGCCATC 60.048 44.000 0.00 0.00 0.00 3.51
4689 5713 4.835615 AGAGATCGAGGTTTAGTATGCCAT 59.164 41.667 0.00 0.00 0.00 4.40
4690 5714 4.215908 AGAGATCGAGGTTTAGTATGCCA 58.784 43.478 0.00 0.00 0.00 4.92
4691 5715 4.857509 AGAGATCGAGGTTTAGTATGCC 57.142 45.455 0.00 0.00 0.00 4.40
4692 5716 6.273825 TCAAAGAGATCGAGGTTTAGTATGC 58.726 40.000 0.00 0.00 0.00 3.14
4693 5717 8.879342 AATCAAAGAGATCGAGGTTTAGTATG 57.121 34.615 0.00 0.00 35.39 2.39
4694 5718 8.919145 AGAATCAAAGAGATCGAGGTTTAGTAT 58.081 33.333 0.00 0.00 35.39 2.12
4695 5719 8.294954 AGAATCAAAGAGATCGAGGTTTAGTA 57.705 34.615 0.00 0.00 35.39 1.82
4696 5720 7.176589 AGAATCAAAGAGATCGAGGTTTAGT 57.823 36.000 0.00 0.00 35.39 2.24
4697 5721 7.223777 GGAAGAATCAAAGAGATCGAGGTTTAG 59.776 40.741 0.00 0.00 35.39 1.85
4698 5722 7.042335 GGAAGAATCAAAGAGATCGAGGTTTA 58.958 38.462 0.00 0.00 35.39 2.01
4699 5723 5.877564 GGAAGAATCAAAGAGATCGAGGTTT 59.122 40.000 0.00 0.00 35.39 3.27
4700 5724 5.188751 AGGAAGAATCAAAGAGATCGAGGTT 59.811 40.000 0.00 0.00 35.39 3.50
4701 5725 4.714308 AGGAAGAATCAAAGAGATCGAGGT 59.286 41.667 0.00 0.00 35.39 3.85
4702 5726 5.275067 AGGAAGAATCAAAGAGATCGAGG 57.725 43.478 0.00 0.00 35.39 4.63
4703 5727 4.975502 CGAGGAAGAATCAAAGAGATCGAG 59.024 45.833 0.00 0.00 35.39 4.04
4704 5728 4.399618 ACGAGGAAGAATCAAAGAGATCGA 59.600 41.667 0.00 0.00 35.39 3.59
4705 5729 4.502282 CACGAGGAAGAATCAAAGAGATCG 59.498 45.833 0.00 0.00 35.39 3.69
4706 5730 5.655488 TCACGAGGAAGAATCAAAGAGATC 58.345 41.667 0.00 0.00 35.39 2.75
4707 5731 5.667539 TCACGAGGAAGAATCAAAGAGAT 57.332 39.130 0.00 0.00 39.09 2.75
4708 5732 5.230942 GTTCACGAGGAAGAATCAAAGAGA 58.769 41.667 0.00 0.00 35.82 3.10
4709 5733 4.090642 CGTTCACGAGGAAGAATCAAAGAG 59.909 45.833 0.00 0.00 43.02 2.85
4710 5734 3.987868 CGTTCACGAGGAAGAATCAAAGA 59.012 43.478 0.00 0.00 43.02 2.52
4711 5735 3.423645 GCGTTCACGAGGAAGAATCAAAG 60.424 47.826 2.87 0.00 43.02 2.77
4712 5736 2.478894 GCGTTCACGAGGAAGAATCAAA 59.521 45.455 2.87 0.00 43.02 2.69
4713 5737 2.066262 GCGTTCACGAGGAAGAATCAA 58.934 47.619 2.87 0.00 43.02 2.57
4714 5738 1.000394 TGCGTTCACGAGGAAGAATCA 60.000 47.619 2.87 0.00 43.02 2.57
4715 5739 1.710013 TGCGTTCACGAGGAAGAATC 58.290 50.000 2.87 0.00 43.02 2.52
4716 5740 2.163818 TTGCGTTCACGAGGAAGAAT 57.836 45.000 2.87 0.00 43.02 2.40
4717 5741 1.942677 TTTGCGTTCACGAGGAAGAA 58.057 45.000 2.87 0.00 43.02 2.52
4718 5742 1.942677 TTTTGCGTTCACGAGGAAGA 58.057 45.000 2.87 0.00 43.02 2.87
4719 5743 2.969443 ATTTTGCGTTCACGAGGAAG 57.031 45.000 2.87 0.00 43.02 3.46
4720 5744 3.187637 CCTTATTTTGCGTTCACGAGGAA 59.812 43.478 2.87 0.00 43.02 3.36
4721 5745 2.739913 CCTTATTTTGCGTTCACGAGGA 59.260 45.455 2.87 0.00 43.02 3.71
4722 5746 2.727916 GCCTTATTTTGCGTTCACGAGG 60.728 50.000 2.87 0.14 43.02 4.63
4723 5747 2.505866 GCCTTATTTTGCGTTCACGAG 58.494 47.619 2.87 0.00 43.02 4.18
4724 5748 1.198178 GGCCTTATTTTGCGTTCACGA 59.802 47.619 2.87 0.00 43.02 4.35
4725 5749 1.199097 AGGCCTTATTTTGCGTTCACG 59.801 47.619 0.00 0.00 43.27 4.35
4726 5750 2.863739 GAGGCCTTATTTTGCGTTCAC 58.136 47.619 6.77 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.