Multiple sequence alignment - TraesCS6D01G135100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G135100 chr6D 100.000 4710 0 0 1 4710 103008079 103012788 0.000000e+00 8698.0
1 TraesCS6D01G135100 chr6D 87.082 449 47 9 2917 3358 455535572 455536016 9.100000e-137 497.0
2 TraesCS6D01G135100 chr6D 79.913 229 38 6 337 561 402890746 402890522 1.360000e-35 161.0
3 TraesCS6D01G135100 chr6D 75.510 245 46 13 67 305 78702344 78702108 1.790000e-19 108.0
4 TraesCS6D01G135100 chr6A 91.851 1902 66 32 741 2592 124299854 124301716 0.000000e+00 2571.0
5 TraesCS6D01G135100 chr6A 91.752 1758 77 35 2902 4614 124301719 124303453 0.000000e+00 2381.0
6 TraesCS6D01G135100 chr6A 82.680 612 53 29 175 740 124299200 124299804 1.180000e-135 494.0
7 TraesCS6D01G135100 chr6A 96.203 79 3 0 4612 4690 124303487 124303565 3.820000e-26 130.0
8 TraesCS6D01G135100 chr6B 86.475 1464 126 39 791 2224 188680473 188681894 0.000000e+00 1541.0
9 TraesCS6D01G135100 chr6B 90.838 513 35 11 4107 4614 188683778 188684283 0.000000e+00 676.0
10 TraesCS6D01G135100 chr6B 86.076 553 66 10 2970 3515 188682619 188683167 6.790000e-163 584.0
11 TraesCS6D01G135100 chr6B 86.957 368 34 4 3576 3931 188683362 188683727 7.340000e-108 401.0
12 TraesCS6D01G135100 chr6B 81.010 495 44 26 262 734 188673730 188674196 9.700000e-92 348.0
13 TraesCS6D01G135100 chr6B 88.302 265 21 9 1 257 188673347 188673609 4.580000e-80 309.0
14 TraesCS6D01G135100 chr6B 72.965 651 114 40 1 610 487000370 486999741 2.250000e-38 171.0
15 TraesCS6D01G135100 chr6B 97.468 79 2 0 4612 4690 188684311 188684389 8.220000e-28 135.0
16 TraesCS6D01G135100 chr6B 81.818 154 16 10 530 678 719738656 719738802 8.280000e-23 119.0
17 TraesCS6D01G135100 chr2B 84.797 934 102 20 1090 2013 434718748 434719651 0.000000e+00 902.0
18 TraesCS6D01G135100 chr2B 87.814 279 31 2 1851 2128 434719650 434719926 1.630000e-84 324.0
19 TraesCS6D01G135100 chr2B 80.702 114 17 3 31 144 42882908 42883016 3.020000e-12 84.2
20 TraesCS6D01G135100 chr2B 80.702 114 17 3 31 144 42885906 42886014 3.020000e-12 84.2
21 TraesCS6D01G135100 chr4D 87.082 449 47 8 2917 3358 95123393 95122949 9.100000e-137 497.0
22 TraesCS6D01G135100 chr4D 76.078 255 45 14 1 250 43611531 43611774 8.280000e-23 119.0
23 TraesCS6D01G135100 chr2D 86.860 449 48 8 2917 3358 520580180 520579736 4.230000e-135 492.0
24 TraesCS6D01G135100 chr2D 75.857 671 114 37 30 680 10762885 10763527 9.910000e-77 298.0
25 TraesCS6D01G135100 chr2D 74.264 645 99 44 66 670 608194496 608195113 4.780000e-50 209.0
26 TraesCS6D01G135100 chr4A 85.294 476 60 5 1068 1533 375825200 375824725 2.550000e-132 483.0
27 TraesCS6D01G135100 chr4A 84.738 439 43 9 1579 2013 375824724 375824306 7.290000e-113 418.0
28 TraesCS6D01G135100 chr4A 89.041 219 20 2 1907 2124 375824263 375824048 7.770000e-68 268.0
29 TraesCS6D01G135100 chr3D 92.013 313 19 3 2593 2903 4500471 4500779 7.240000e-118 435.0
30 TraesCS6D01G135100 chr3D 81.818 451 49 13 2917 3358 533430027 533429601 9.700000e-92 348.0
31 TraesCS6D01G135100 chr3D 77.117 555 79 35 154 678 30289596 30290132 1.290000e-70 278.0
32 TraesCS6D01G135100 chr3D 75.221 565 83 36 153 671 1743104 1743657 1.030000e-51 215.0
33 TraesCS6D01G135100 chr3D 82.648 219 32 5 344 560 12193631 12193417 6.220000e-44 189.0
34 TraesCS6D01G135100 chr3A 91.693 313 20 3 2593 2903 10359493 10359801 3.370000e-116 429.0
35 TraesCS6D01G135100 chr7D 81.538 455 48 26 1088 1531 613546473 613546902 4.510000e-90 342.0
36 TraesCS6D01G135100 chr7D 79.221 154 22 9 19 168 500900433 500900580 1.080000e-16 99.0
37 TraesCS6D01G135100 chr7A 82.297 418 53 17 1122 1531 705123783 705124187 4.510000e-90 342.0
38 TraesCS6D01G135100 chr7B 81.995 411 52 18 1122 1531 704037862 704038251 3.510000e-86 329.0
39 TraesCS6D01G135100 chr7B 75.960 495 72 34 269 743 736825761 736825294 1.330000e-50 211.0
40 TraesCS6D01G135100 chr3B 74.465 701 108 48 30 700 564021227 564021886 2.190000e-58 237.0
41 TraesCS6D01G135100 chr3B 77.442 430 64 24 149 558 19363468 19363884 4.740000e-55 226.0
42 TraesCS6D01G135100 chr5D 80.645 279 36 15 402 674 67349974 67350240 2.870000e-47 200.0
43 TraesCS6D01G135100 chr5D 83.088 136 20 3 66 199 5225523 5225657 2.300000e-23 121.0
44 TraesCS6D01G135100 chr1D 75.647 464 67 30 223 648 370903101 370902646 6.220000e-44 189.0
45 TraesCS6D01G135100 chr1D 75.321 312 46 20 30 322 425234024 425234323 2.300000e-23 121.0
46 TraesCS6D01G135100 chr5B 77.033 209 30 13 1 199 591823479 591823279 2.320000e-18 104.0
47 TraesCS6D01G135100 chr5B 80.899 89 9 6 225 313 388169373 388169293 3.930000e-06 63.9
48 TraesCS6D01G135100 chr2A 75.581 172 29 10 275 441 510074603 510074766 6.540000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G135100 chr6D 103008079 103012788 4709 False 8698.000000 8698 100.000000 1 4710 1 chr6D.!!$F1 4709
1 TraesCS6D01G135100 chr6A 124299200 124303565 4365 False 1394.000000 2571 90.621500 175 4690 4 chr6A.!!$F1 4515
2 TraesCS6D01G135100 chr6B 188680473 188684389 3916 False 667.400000 1541 89.562800 791 4690 5 chr6B.!!$F3 3899
3 TraesCS6D01G135100 chr6B 188673347 188674196 849 False 328.500000 348 84.656000 1 734 2 chr6B.!!$F2 733
4 TraesCS6D01G135100 chr2B 434718748 434719926 1178 False 613.000000 902 86.305500 1090 2128 2 chr2B.!!$F2 1038
5 TraesCS6D01G135100 chr2D 10762885 10763527 642 False 298.000000 298 75.857000 30 680 1 chr2D.!!$F1 650
6 TraesCS6D01G135100 chr2D 608194496 608195113 617 False 209.000000 209 74.264000 66 670 1 chr2D.!!$F2 604
7 TraesCS6D01G135100 chr4A 375824048 375825200 1152 True 389.666667 483 86.357667 1068 2124 3 chr4A.!!$R1 1056
8 TraesCS6D01G135100 chr3D 30289596 30290132 536 False 278.000000 278 77.117000 154 678 1 chr3D.!!$F3 524
9 TraesCS6D01G135100 chr3D 1743104 1743657 553 False 215.000000 215 75.221000 153 671 1 chr3D.!!$F1 518
10 TraesCS6D01G135100 chr3B 564021227 564021886 659 False 237.000000 237 74.465000 30 700 1 chr3B.!!$F2 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 1040 2.032030 ACAAAACGAGGCTGAATGTTCG 60.032 45.455 0.00 0.0 38.88 3.95 F
1378 1778 0.034198 TGATTTGGTGGCTTCGTCGA 59.966 50.000 0.00 0.0 0.00 4.20 F
1662 2081 0.037139 TGCTGAATTGCATTGTGGCC 60.037 50.000 0.00 0.0 38.12 5.36 F
2695 3641 0.181114 CTAGCTAGCATTGGCCACCA 59.819 55.000 18.83 0.0 42.56 4.17 F
2834 3780 0.104304 GCTCACCTACACCATACGGG 59.896 60.000 0.00 0.0 44.81 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2676 3622 0.181114 TGGTGGCCAATGCTAGCTAG 59.819 55.0 16.84 16.84 45.57 3.42 R
2815 3761 0.104304 CCCGTATGGTGTAGGTGAGC 59.896 60.0 0.00 0.00 0.00 4.26 R
2816 3762 0.104304 GCCCGTATGGTGTAGGTGAG 59.896 60.0 0.00 0.00 36.04 3.51 R
3596 4709 0.332632 AAGGCATAGAGGGCAAGCAA 59.667 50.0 0.00 0.00 35.46 3.91 R
4086 5235 0.690192 TAGGCACAGTGCTTTGGCTA 59.310 50.0 24.75 13.94 46.13 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
700 1040 2.032030 ACAAAACGAGGCTGAATGTTCG 60.032 45.455 0.00 0.00 38.88 3.95
736 1077 2.551270 CAACTCGTGCCACGCTTC 59.449 61.111 13.39 0.00 42.21 3.86
751 1141 3.168628 CTTCAGCAAGCAAACCGTG 57.831 52.632 0.00 0.00 0.00 4.94
771 1163 3.271490 GTGTAGGCCTCTATATCCCCCTA 59.729 52.174 9.68 0.00 0.00 3.53
774 1166 4.520291 AGGCCTCTATATCCCCCTAAAA 57.480 45.455 0.00 0.00 0.00 1.52
837 1229 2.361789 GGCCGTAAATTAACTGCCTCA 58.638 47.619 2.62 0.00 43.97 3.86
1018 1416 3.006756 ATGTCGGTGAGTGCCCTCG 62.007 63.158 0.00 0.00 40.85 4.63
1061 1459 1.224592 GCTTCCATCCCCATCACGT 59.775 57.895 0.00 0.00 0.00 4.49
1333 1732 1.207089 TCTCCAATCCTCGATTTGCGT 59.793 47.619 0.00 0.00 41.80 5.24
1334 1733 1.594862 CTCCAATCCTCGATTTGCGTC 59.405 52.381 0.00 0.00 41.80 5.19
1339 1739 0.888619 TCCTCGATTTGCGTCTCTGT 59.111 50.000 0.00 0.00 41.80 3.41
1348 1748 0.463654 TGCGTCTCTGTTTGCTTGGT 60.464 50.000 0.00 0.00 0.00 3.67
1354 1754 3.817647 GTCTCTGTTTGCTTGGTTGATCT 59.182 43.478 0.00 0.00 0.00 2.75
1357 1757 1.879380 TGTTTGCTTGGTTGATCTCCG 59.121 47.619 0.00 0.00 0.00 4.63
1373 1773 0.960364 TCCGCTGATTTGGTGGCTTC 60.960 55.000 0.00 0.00 34.64 3.86
1374 1774 1.135315 CGCTGATTTGGTGGCTTCG 59.865 57.895 0.00 0.00 0.00 3.79
1375 1775 1.577328 CGCTGATTTGGTGGCTTCGT 61.577 55.000 0.00 0.00 0.00 3.85
1376 1776 0.169009 GCTGATTTGGTGGCTTCGTC 59.831 55.000 0.00 0.00 0.00 4.20
1377 1777 0.443869 CTGATTTGGTGGCTTCGTCG 59.556 55.000 0.00 0.00 0.00 5.12
1378 1778 0.034198 TGATTTGGTGGCTTCGTCGA 59.966 50.000 0.00 0.00 0.00 4.20
1379 1779 1.338674 TGATTTGGTGGCTTCGTCGAT 60.339 47.619 0.00 0.00 0.00 3.59
1382 1782 2.459060 TTGGTGGCTTCGTCGATTTA 57.541 45.000 0.00 0.00 0.00 1.40
1383 1783 2.004583 TGGTGGCTTCGTCGATTTAG 57.995 50.000 0.00 0.00 0.00 1.85
1400 1811 0.876777 TAGGGTTTGACGTGTGTGCG 60.877 55.000 0.00 0.00 37.94 5.34
1558 1970 1.851653 AGTATCGGGACTCCTGGTAGT 59.148 52.381 3.92 1.35 0.00 2.73
1589 2002 0.179192 CATCGTGCAATTGTGGTCGG 60.179 55.000 7.40 0.00 0.00 4.79
1662 2081 0.037139 TGCTGAATTGCATTGTGGCC 60.037 50.000 0.00 0.00 38.12 5.36
1705 2125 2.151202 CGTTGGTGTGCCTTCTATTGT 58.849 47.619 0.00 0.00 35.27 2.71
1805 2226 9.903682 CCTTCTGATGCATAGGTTAATATTTTG 57.096 33.333 0.00 0.00 0.00 2.44
1808 2229 9.407380 TCTGATGCATAGGTTAATATTTTGTGT 57.593 29.630 0.00 0.00 0.00 3.72
1840 2261 7.635973 CGTAGTTATGTTGATGTAATTGTGCAG 59.364 37.037 0.00 0.00 0.00 4.41
1854 2275 2.564771 TGTGCAGTTCCTCTTCTTGTG 58.435 47.619 0.00 0.00 0.00 3.33
1868 2289 2.564771 TCTTGTGGCAGTCTGTTTCAG 58.435 47.619 0.93 0.00 0.00 3.02
2118 2704 6.441274 CATTGGTGCCAAGTATGTATCATTC 58.559 40.000 9.65 0.00 39.47 2.67
2134 2723 8.883954 TGTATCATTCATCTTTCTGTGATCTC 57.116 34.615 0.00 0.00 0.00 2.75
2256 3156 1.151760 ATCTCCCATGGGCATGCTTA 58.848 50.000 27.41 5.85 37.49 3.09
2257 3157 1.151760 TCTCCCATGGGCATGCTTAT 58.848 50.000 27.41 9.46 37.49 1.73
2258 3158 2.347500 TCTCCCATGGGCATGCTTATA 58.653 47.619 27.41 4.20 37.49 0.98
2259 3159 2.715880 TCTCCCATGGGCATGCTTATAA 59.284 45.455 27.41 3.38 37.49 0.98
2260 3160 2.821969 CTCCCATGGGCATGCTTATAAC 59.178 50.000 27.41 0.00 37.49 1.89
2261 3161 2.176581 TCCCATGGGCATGCTTATAACA 59.823 45.455 27.41 0.08 37.49 2.41
2262 3162 2.559668 CCCATGGGCATGCTTATAACAG 59.440 50.000 20.41 0.92 37.49 3.16
2263 3163 3.225104 CCATGGGCATGCTTATAACAGT 58.775 45.455 18.92 0.00 37.49 3.55
2264 3164 3.005050 CCATGGGCATGCTTATAACAGTG 59.995 47.826 18.92 2.46 37.49 3.66
2265 3165 3.643199 TGGGCATGCTTATAACAGTGA 57.357 42.857 18.92 0.00 0.00 3.41
2266 3166 3.961849 TGGGCATGCTTATAACAGTGAA 58.038 40.909 18.92 0.00 0.00 3.18
2267 3167 4.535781 TGGGCATGCTTATAACAGTGAAT 58.464 39.130 18.92 0.00 0.00 2.57
2268 3168 4.955450 TGGGCATGCTTATAACAGTGAATT 59.045 37.500 18.92 0.00 0.00 2.17
2269 3169 6.125719 TGGGCATGCTTATAACAGTGAATTA 58.874 36.000 18.92 0.00 0.00 1.40
2270 3170 6.777091 TGGGCATGCTTATAACAGTGAATTAT 59.223 34.615 18.92 0.00 0.00 1.28
2271 3171 7.040478 TGGGCATGCTTATAACAGTGAATTATC 60.040 37.037 18.92 0.00 0.00 1.75
2272 3172 7.040478 GGGCATGCTTATAACAGTGAATTATCA 60.040 37.037 18.92 0.00 0.00 2.15
2273 3173 8.019669 GGCATGCTTATAACAGTGAATTATCAG 58.980 37.037 18.92 0.00 35.88 2.90
2274 3174 7.536622 GCATGCTTATAACAGTGAATTATCAGC 59.463 37.037 11.37 10.55 38.72 4.26
2275 3175 8.781196 CATGCTTATAACAGTGAATTATCAGCT 58.219 33.333 15.32 0.00 38.89 4.24
2276 3176 8.737168 TGCTTATAACAGTGAATTATCAGCTT 57.263 30.769 15.32 0.00 38.89 3.74
2280 3180 7.944729 ATAACAGTGAATTATCAGCTTTGGT 57.055 32.000 0.00 0.00 35.88 3.67
2371 3288 5.582950 TGGGATTTATAGGGAGTGAATGG 57.417 43.478 0.00 0.00 0.00 3.16
2505 3449 1.422977 TTAGTGTTGCCCAGGAGCCA 61.423 55.000 0.00 0.00 0.00 4.75
2592 3538 1.069090 GAACCACAGACCGCAGTGA 59.931 57.895 0.00 0.00 37.97 3.41
2593 3539 0.946221 GAACCACAGACCGCAGTGAG 60.946 60.000 0.00 0.00 37.97 3.51
2594 3540 2.740055 CCACAGACCGCAGTGAGC 60.740 66.667 0.00 0.00 37.97 4.26
2595 3541 2.029518 CACAGACCGCAGTGAGCA 59.970 61.111 0.00 0.00 46.13 4.26
2596 3542 2.029666 ACAGACCGCAGTGAGCAC 59.970 61.111 0.00 0.00 46.13 4.40
2597 3543 2.029518 CAGACCGCAGTGAGCACA 59.970 61.111 3.19 0.00 46.13 4.57
2598 3544 2.029666 AGACCGCAGTGAGCACAC 59.970 61.111 6.11 6.11 46.13 3.82
2599 3545 3.044305 GACCGCAGTGAGCACACC 61.044 66.667 10.88 0.00 46.99 4.16
2600 3546 3.807631 GACCGCAGTGAGCACACCA 62.808 63.158 10.88 0.00 46.99 4.17
2601 3547 2.359107 CCGCAGTGAGCACACCAT 60.359 61.111 10.88 0.00 46.99 3.55
2602 3548 2.683859 CCGCAGTGAGCACACCATG 61.684 63.158 10.88 4.98 46.99 3.66
2603 3549 2.683859 CGCAGTGAGCACACCATGG 61.684 63.158 11.19 11.19 46.99 3.66
2604 3550 1.302752 GCAGTGAGCACACCATGGA 60.303 57.895 21.47 0.00 46.99 3.41
2605 3551 0.890542 GCAGTGAGCACACCATGGAA 60.891 55.000 21.47 0.00 46.99 3.53
2606 3552 1.608055 CAGTGAGCACACCATGGAAA 58.392 50.000 21.47 0.00 46.99 3.13
2607 3553 1.538512 CAGTGAGCACACCATGGAAAG 59.461 52.381 21.47 10.40 46.99 2.62
2608 3554 1.421268 AGTGAGCACACCATGGAAAGA 59.579 47.619 21.47 0.00 46.99 2.52
2609 3555 2.040813 AGTGAGCACACCATGGAAAGAT 59.959 45.455 21.47 5.57 46.99 2.40
2610 3556 2.163010 GTGAGCACACCATGGAAAGATG 59.837 50.000 21.47 8.39 40.74 2.90
2611 3557 2.224843 TGAGCACACCATGGAAAGATGT 60.225 45.455 21.47 9.15 0.00 3.06
2612 3558 3.008923 TGAGCACACCATGGAAAGATGTA 59.991 43.478 21.47 0.00 0.00 2.29
2613 3559 4.202441 GAGCACACCATGGAAAGATGTAT 58.798 43.478 21.47 3.95 0.00 2.29
2614 3560 4.603131 AGCACACCATGGAAAGATGTATT 58.397 39.130 21.47 0.56 0.00 1.89
2615 3561 4.400251 AGCACACCATGGAAAGATGTATTG 59.600 41.667 21.47 4.27 0.00 1.90
2616 3562 4.675510 CACACCATGGAAAGATGTATTGC 58.324 43.478 21.47 0.00 0.00 3.56
2617 3563 4.158209 CACACCATGGAAAGATGTATTGCA 59.842 41.667 21.47 0.00 32.55 4.08
2618 3564 4.957954 ACACCATGGAAAGATGTATTGCAT 59.042 37.500 21.47 0.00 39.08 3.96
2637 3583 6.856135 TGCATCATAAGAAGCAAGAGTATG 57.144 37.500 0.00 0.00 44.58 2.39
2638 3584 6.585416 TGCATCATAAGAAGCAAGAGTATGA 58.415 36.000 0.00 0.00 44.58 2.15
2639 3585 7.049754 TGCATCATAAGAAGCAAGAGTATGAA 58.950 34.615 0.00 0.00 44.58 2.57
2640 3586 7.226128 TGCATCATAAGAAGCAAGAGTATGAAG 59.774 37.037 0.00 0.00 44.58 3.02
2641 3587 7.574496 CATCATAAGAAGCAAGAGTATGAAGC 58.426 38.462 0.00 0.00 35.45 3.86
2642 3588 6.643388 TCATAAGAAGCAAGAGTATGAAGCA 58.357 36.000 0.00 0.00 30.28 3.91
2643 3589 7.105588 TCATAAGAAGCAAGAGTATGAAGCAA 58.894 34.615 0.00 0.00 30.28 3.91
2644 3590 7.607607 TCATAAGAAGCAAGAGTATGAAGCAAA 59.392 33.333 0.00 0.00 30.28 3.68
2645 3591 6.639632 AAGAAGCAAGAGTATGAAGCAAAA 57.360 33.333 0.00 0.00 0.00 2.44
2646 3592 6.006759 AGAAGCAAGAGTATGAAGCAAAAC 57.993 37.500 0.00 0.00 0.00 2.43
2647 3593 4.773323 AGCAAGAGTATGAAGCAAAACC 57.227 40.909 0.00 0.00 0.00 3.27
2648 3594 4.144297 AGCAAGAGTATGAAGCAAAACCA 58.856 39.130 0.00 0.00 0.00 3.67
2649 3595 4.768968 AGCAAGAGTATGAAGCAAAACCAT 59.231 37.500 0.00 0.00 0.00 3.55
2650 3596 4.860907 GCAAGAGTATGAAGCAAAACCATG 59.139 41.667 0.00 0.00 0.00 3.66
2651 3597 5.335897 GCAAGAGTATGAAGCAAAACCATGA 60.336 40.000 0.00 0.00 0.00 3.07
2652 3598 6.680810 CAAGAGTATGAAGCAAAACCATGAA 58.319 36.000 0.00 0.00 0.00 2.57
2653 3599 6.899393 AGAGTATGAAGCAAAACCATGAAA 57.101 33.333 0.00 0.00 0.00 2.69
2654 3600 6.681777 AGAGTATGAAGCAAAACCATGAAAC 58.318 36.000 0.00 0.00 0.00 2.78
2655 3601 6.491403 AGAGTATGAAGCAAAACCATGAAACT 59.509 34.615 0.00 0.00 0.00 2.66
2656 3602 7.014615 AGAGTATGAAGCAAAACCATGAAACTT 59.985 33.333 0.00 0.00 0.00 2.66
2657 3603 6.925165 AGTATGAAGCAAAACCATGAAACTTG 59.075 34.615 0.00 0.00 0.00 3.16
2658 3604 5.083533 TGAAGCAAAACCATGAAACTTGT 57.916 34.783 0.00 0.00 0.00 3.16
2659 3605 4.869297 TGAAGCAAAACCATGAAACTTGTG 59.131 37.500 0.00 0.00 0.00 3.33
2660 3606 3.197265 AGCAAAACCATGAAACTTGTGC 58.803 40.909 0.00 0.00 0.00 4.57
2661 3607 2.935201 GCAAAACCATGAAACTTGTGCA 59.065 40.909 0.00 0.00 0.00 4.57
2662 3608 3.373439 GCAAAACCATGAAACTTGTGCAA 59.627 39.130 0.00 0.00 0.00 4.08
2663 3609 4.727448 GCAAAACCATGAAACTTGTGCAAC 60.727 41.667 0.00 0.00 37.35 4.17
2677 3623 4.607293 TGTGCAACAGAGTAATCAGACT 57.393 40.909 0.00 0.00 45.67 3.24
2678 3624 5.722021 TGTGCAACAGAGTAATCAGACTA 57.278 39.130 0.00 0.00 45.67 2.59
2679 3625 5.714047 TGTGCAACAGAGTAATCAGACTAG 58.286 41.667 0.00 0.00 45.67 2.57
2680 3626 4.564769 GTGCAACAGAGTAATCAGACTAGC 59.435 45.833 0.00 0.00 36.32 3.42
2681 3627 4.464244 TGCAACAGAGTAATCAGACTAGCT 59.536 41.667 0.00 0.00 0.00 3.32
2682 3628 5.652452 TGCAACAGAGTAATCAGACTAGCTA 59.348 40.000 0.00 0.00 0.00 3.32
2683 3629 6.183360 TGCAACAGAGTAATCAGACTAGCTAG 60.183 42.308 19.44 19.44 0.00 3.42
2684 3630 6.205784 CAACAGAGTAATCAGACTAGCTAGC 58.794 44.000 20.91 6.62 0.00 3.42
2685 3631 5.441500 ACAGAGTAATCAGACTAGCTAGCA 58.558 41.667 20.91 2.78 0.00 3.49
2686 3632 6.068010 ACAGAGTAATCAGACTAGCTAGCAT 58.932 40.000 20.91 6.57 0.00 3.79
2687 3633 6.549364 ACAGAGTAATCAGACTAGCTAGCATT 59.451 38.462 20.91 14.77 0.00 3.56
2688 3634 6.862608 CAGAGTAATCAGACTAGCTAGCATTG 59.137 42.308 20.91 15.42 0.00 2.82
2689 3635 6.015519 AGAGTAATCAGACTAGCTAGCATTGG 60.016 42.308 20.91 1.14 0.00 3.16
2690 3636 2.898729 TCAGACTAGCTAGCATTGGC 57.101 50.000 20.91 8.45 41.61 4.52
2691 3637 1.414181 TCAGACTAGCTAGCATTGGCC 59.586 52.381 20.91 0.00 42.56 5.36
2692 3638 1.139654 CAGACTAGCTAGCATTGGCCA 59.860 52.381 20.91 0.00 42.56 5.36
2693 3639 1.139853 AGACTAGCTAGCATTGGCCAC 59.860 52.381 20.91 0.00 42.56 5.01
2694 3640 0.181350 ACTAGCTAGCATTGGCCACC 59.819 55.000 20.91 0.00 42.56 4.61
2695 3641 0.181114 CTAGCTAGCATTGGCCACCA 59.819 55.000 18.83 0.00 42.56 4.17
2696 3642 0.846015 TAGCTAGCATTGGCCACCAT 59.154 50.000 18.83 0.00 42.56 3.55
2697 3643 0.846015 AGCTAGCATTGGCCACCATA 59.154 50.000 18.83 0.00 42.56 2.74
2698 3644 1.215173 AGCTAGCATTGGCCACCATAA 59.785 47.619 18.83 0.00 42.56 1.90
2699 3645 1.610522 GCTAGCATTGGCCACCATAAG 59.389 52.381 3.88 1.51 42.56 1.73
2700 3646 2.936202 CTAGCATTGGCCACCATAAGT 58.064 47.619 3.88 0.00 42.56 2.24
2701 3647 2.236489 AGCATTGGCCACCATAAGTT 57.764 45.000 3.88 0.00 42.56 2.66
2702 3648 3.380471 AGCATTGGCCACCATAAGTTA 57.620 42.857 3.88 0.00 42.56 2.24
2703 3649 3.707316 AGCATTGGCCACCATAAGTTAA 58.293 40.909 3.88 0.00 42.56 2.01
2704 3650 4.289245 AGCATTGGCCACCATAAGTTAAT 58.711 39.130 3.88 0.00 42.56 1.40
2705 3651 4.716287 AGCATTGGCCACCATAAGTTAATT 59.284 37.500 3.88 0.00 42.56 1.40
2706 3652 5.896678 AGCATTGGCCACCATAAGTTAATTA 59.103 36.000 3.88 0.00 42.56 1.40
2707 3653 6.382570 AGCATTGGCCACCATAAGTTAATTAA 59.617 34.615 3.88 0.00 42.56 1.40
2708 3654 7.044798 GCATTGGCCACCATAAGTTAATTAAA 58.955 34.615 3.88 0.00 31.53 1.52
2709 3655 7.550906 GCATTGGCCACCATAAGTTAATTAAAA 59.449 33.333 3.88 0.00 31.53 1.52
2710 3656 9.612066 CATTGGCCACCATAAGTTAATTAAAAT 57.388 29.630 3.88 0.00 31.53 1.82
2711 3657 9.612066 ATTGGCCACCATAAGTTAATTAAAATG 57.388 29.630 3.88 4.79 31.53 2.32
2712 3658 8.367660 TGGCCACCATAAGTTAATTAAAATGA 57.632 30.769 0.00 0.00 0.00 2.57
2713 3659 8.474025 TGGCCACCATAAGTTAATTAAAATGAG 58.526 33.333 0.00 9.00 0.00 2.90
2714 3660 8.691797 GGCCACCATAAGTTAATTAAAATGAGA 58.308 33.333 0.00 0.00 0.00 3.27
2735 3681 8.746052 TGAGAAAATAAAGGAGAAGTCAAACA 57.254 30.769 0.00 0.00 0.00 2.83
2736 3682 9.184523 TGAGAAAATAAAGGAGAAGTCAAACAA 57.815 29.630 0.00 0.00 0.00 2.83
2738 3684 9.971922 AGAAAATAAAGGAGAAGTCAAACAATG 57.028 29.630 0.00 0.00 0.00 2.82
2739 3685 9.196552 GAAAATAAAGGAGAAGTCAAACAATGG 57.803 33.333 0.00 0.00 0.00 3.16
2740 3686 7.839680 AATAAAGGAGAAGTCAAACAATGGT 57.160 32.000 0.00 0.00 0.00 3.55
2741 3687 5.774498 AAAGGAGAAGTCAAACAATGGTC 57.226 39.130 0.00 0.00 0.00 4.02
2742 3688 4.437682 AGGAGAAGTCAAACAATGGTCA 57.562 40.909 0.00 0.00 0.00 4.02
2743 3689 4.792068 AGGAGAAGTCAAACAATGGTCAA 58.208 39.130 0.00 0.00 0.00 3.18
2744 3690 4.580580 AGGAGAAGTCAAACAATGGTCAAC 59.419 41.667 0.00 0.00 0.00 3.18
2745 3691 4.338118 GGAGAAGTCAAACAATGGTCAACA 59.662 41.667 0.00 0.00 0.00 3.33
2746 3692 5.163561 GGAGAAGTCAAACAATGGTCAACAA 60.164 40.000 0.00 0.00 0.00 2.83
2747 3693 6.461509 GGAGAAGTCAAACAATGGTCAACAAT 60.462 38.462 0.00 0.00 0.00 2.71
2748 3694 6.507023 AGAAGTCAAACAATGGTCAACAATC 58.493 36.000 0.00 0.00 0.00 2.67
2749 3695 5.850557 AGTCAAACAATGGTCAACAATCA 57.149 34.783 0.00 0.00 0.00 2.57
2750 3696 6.409524 AGTCAAACAATGGTCAACAATCAT 57.590 33.333 0.00 0.00 0.00 2.45
2751 3697 7.523293 AGTCAAACAATGGTCAACAATCATA 57.477 32.000 0.00 0.00 0.00 2.15
2752 3698 7.950512 AGTCAAACAATGGTCAACAATCATAA 58.049 30.769 0.00 0.00 0.00 1.90
2753 3699 8.587608 AGTCAAACAATGGTCAACAATCATAAT 58.412 29.630 0.00 0.00 0.00 1.28
2754 3700 9.853555 GTCAAACAATGGTCAACAATCATAATA 57.146 29.630 0.00 0.00 0.00 0.98
2762 3708 9.699410 ATGGTCAACAATCATAATAGAAAAGGA 57.301 29.630 0.00 0.00 0.00 3.36
2763 3709 8.956426 TGGTCAACAATCATAATAGAAAAGGAC 58.044 33.333 0.00 0.00 0.00 3.85
2764 3710 8.122952 GGTCAACAATCATAATAGAAAAGGACG 58.877 37.037 0.00 0.00 0.00 4.79
2765 3711 8.879759 GTCAACAATCATAATAGAAAAGGACGA 58.120 33.333 0.00 0.00 0.00 4.20
2766 3712 9.098355 TCAACAATCATAATAGAAAAGGACGAG 57.902 33.333 0.00 0.00 0.00 4.18
2767 3713 8.338259 CAACAATCATAATAGAAAAGGACGAGG 58.662 37.037 0.00 0.00 0.00 4.63
2768 3714 7.792032 ACAATCATAATAGAAAAGGACGAGGA 58.208 34.615 0.00 0.00 0.00 3.71
2769 3715 8.265055 ACAATCATAATAGAAAAGGACGAGGAA 58.735 33.333 0.00 0.00 0.00 3.36
2770 3716 9.277783 CAATCATAATAGAAAAGGACGAGGAAT 57.722 33.333 0.00 0.00 0.00 3.01
2771 3717 9.853177 AATCATAATAGAAAAGGACGAGGAATT 57.147 29.630 0.00 0.00 0.00 2.17
2808 3754 9.778741 GAATGATTTATAGGTATGAAGTGGTCA 57.221 33.333 0.00 0.00 41.67 4.02
2810 3756 9.730705 ATGATTTATAGGTATGAAGTGGTCATG 57.269 33.333 0.00 0.00 46.85 3.07
2811 3757 7.661437 TGATTTATAGGTATGAAGTGGTCATGC 59.339 37.037 0.00 0.00 46.85 4.06
2820 3766 2.358615 TGGTCATGCCACGCTCAC 60.359 61.111 4.93 0.00 43.61 3.51
2821 3767 3.127533 GGTCATGCCACGCTCACC 61.128 66.667 1.78 0.00 37.17 4.02
2822 3768 2.046892 GTCATGCCACGCTCACCT 60.047 61.111 0.00 0.00 0.00 4.00
2823 3769 1.218047 GTCATGCCACGCTCACCTA 59.782 57.895 0.00 0.00 0.00 3.08
2824 3770 1.084370 GTCATGCCACGCTCACCTAC 61.084 60.000 0.00 0.00 0.00 3.18
2825 3771 1.079197 CATGCCACGCTCACCTACA 60.079 57.895 0.00 0.00 0.00 2.74
2826 3772 1.079127 ATGCCACGCTCACCTACAC 60.079 57.895 0.00 0.00 0.00 2.90
2827 3773 2.434359 GCCACGCTCACCTACACC 60.434 66.667 0.00 0.00 0.00 4.16
2828 3774 3.056458 CCACGCTCACCTACACCA 58.944 61.111 0.00 0.00 0.00 4.17
2829 3775 1.596934 CCACGCTCACCTACACCAT 59.403 57.895 0.00 0.00 0.00 3.55
2830 3776 0.821517 CCACGCTCACCTACACCATA 59.178 55.000 0.00 0.00 0.00 2.74
2831 3777 1.470979 CCACGCTCACCTACACCATAC 60.471 57.143 0.00 0.00 0.00 2.39
2832 3778 0.454600 ACGCTCACCTACACCATACG 59.545 55.000 0.00 0.00 0.00 3.06
2833 3779 0.248907 CGCTCACCTACACCATACGG 60.249 60.000 0.00 0.00 38.77 4.02
2834 3780 0.104304 GCTCACCTACACCATACGGG 59.896 60.000 0.00 0.00 44.81 5.28
2835 3781 0.104304 CTCACCTACACCATACGGGC 59.896 60.000 0.00 0.00 42.05 6.13
2836 3782 0.324923 TCACCTACACCATACGGGCT 60.325 55.000 0.00 0.00 42.05 5.19
2837 3783 1.063792 TCACCTACACCATACGGGCTA 60.064 52.381 0.00 0.00 42.05 3.93
2838 3784 1.340248 CACCTACACCATACGGGCTAG 59.660 57.143 0.00 0.00 42.05 3.42
2839 3785 1.063417 ACCTACACCATACGGGCTAGT 60.063 52.381 0.00 0.00 42.05 2.57
2840 3786 1.340248 CCTACACCATACGGGCTAGTG 59.660 57.143 0.00 0.00 42.05 2.74
2841 3787 2.029623 CTACACCATACGGGCTAGTGT 58.970 52.381 0.00 0.00 43.65 3.55
2842 3788 0.822164 ACACCATACGGGCTAGTGTC 59.178 55.000 0.00 0.00 42.05 3.67
2843 3789 0.821517 CACCATACGGGCTAGTGTCA 59.178 55.000 0.00 0.00 42.05 3.58
2844 3790 1.412710 CACCATACGGGCTAGTGTCAT 59.587 52.381 0.00 0.00 42.05 3.06
2845 3791 1.687123 ACCATACGGGCTAGTGTCATC 59.313 52.381 0.00 0.00 42.05 2.92
2846 3792 1.964223 CCATACGGGCTAGTGTCATCT 59.036 52.381 0.00 0.00 0.00 2.90
2847 3793 2.288457 CCATACGGGCTAGTGTCATCTG 60.288 54.545 0.00 0.00 0.00 2.90
2848 3794 2.139323 TACGGGCTAGTGTCATCTGT 57.861 50.000 0.00 0.00 0.00 3.41
2849 3795 0.818296 ACGGGCTAGTGTCATCTGTC 59.182 55.000 0.00 0.00 0.00 3.51
2850 3796 1.107114 CGGGCTAGTGTCATCTGTCT 58.893 55.000 0.00 0.00 0.00 3.41
2851 3797 1.066303 CGGGCTAGTGTCATCTGTCTC 59.934 57.143 0.00 0.00 0.00 3.36
2852 3798 2.383855 GGGCTAGTGTCATCTGTCTCT 58.616 52.381 0.00 0.00 0.00 3.10
2853 3799 2.763448 GGGCTAGTGTCATCTGTCTCTT 59.237 50.000 0.00 0.00 0.00 2.85
2854 3800 3.181480 GGGCTAGTGTCATCTGTCTCTTC 60.181 52.174 0.00 0.00 0.00 2.87
2855 3801 3.181480 GGCTAGTGTCATCTGTCTCTTCC 60.181 52.174 0.00 0.00 0.00 3.46
2856 3802 3.699038 GCTAGTGTCATCTGTCTCTTCCT 59.301 47.826 0.00 0.00 0.00 3.36
2857 3803 4.439974 GCTAGTGTCATCTGTCTCTTCCTG 60.440 50.000 0.00 0.00 0.00 3.86
2858 3804 2.233431 AGTGTCATCTGTCTCTTCCTGC 59.767 50.000 0.00 0.00 0.00 4.85
2859 3805 1.552337 TGTCATCTGTCTCTTCCTGCC 59.448 52.381 0.00 0.00 0.00 4.85
2860 3806 1.134551 GTCATCTGTCTCTTCCTGCCC 60.135 57.143 0.00 0.00 0.00 5.36
2861 3807 0.907486 CATCTGTCTCTTCCTGCCCA 59.093 55.000 0.00 0.00 0.00 5.36
2862 3808 1.134461 CATCTGTCTCTTCCTGCCCAG 60.134 57.143 0.00 0.00 0.00 4.45
2863 3809 0.115152 TCTGTCTCTTCCTGCCCAGA 59.885 55.000 0.00 0.00 0.00 3.86
2864 3810 0.979665 CTGTCTCTTCCTGCCCAGAA 59.020 55.000 0.00 0.00 0.00 3.02
2865 3811 1.558756 CTGTCTCTTCCTGCCCAGAAT 59.441 52.381 0.00 0.00 0.00 2.40
2866 3812 1.556911 TGTCTCTTCCTGCCCAGAATC 59.443 52.381 0.00 0.00 0.00 2.52
2867 3813 1.556911 GTCTCTTCCTGCCCAGAATCA 59.443 52.381 0.00 0.00 0.00 2.57
2868 3814 2.172293 GTCTCTTCCTGCCCAGAATCAT 59.828 50.000 0.00 0.00 0.00 2.45
2869 3815 2.437281 TCTCTTCCTGCCCAGAATCATC 59.563 50.000 0.00 0.00 0.00 2.92
2870 3816 1.139654 TCTTCCTGCCCAGAATCATCG 59.860 52.381 0.00 0.00 0.00 3.84
2871 3817 0.464373 TTCCTGCCCAGAATCATCGC 60.464 55.000 0.00 0.00 0.00 4.58
2872 3818 1.895707 CCTGCCCAGAATCATCGCC 60.896 63.158 0.00 0.00 0.00 5.54
2873 3819 1.147824 CTGCCCAGAATCATCGCCT 59.852 57.895 0.00 0.00 0.00 5.52
2874 3820 0.883814 CTGCCCAGAATCATCGCCTC 60.884 60.000 0.00 0.00 0.00 4.70
2875 3821 1.599240 GCCCAGAATCATCGCCTCC 60.599 63.158 0.00 0.00 0.00 4.30
2876 3822 2.049627 GCCCAGAATCATCGCCTCCT 62.050 60.000 0.00 0.00 0.00 3.69
2877 3823 0.471617 CCCAGAATCATCGCCTCCTT 59.528 55.000 0.00 0.00 0.00 3.36
2878 3824 1.542108 CCCAGAATCATCGCCTCCTTC 60.542 57.143 0.00 0.00 0.00 3.46
2879 3825 1.542108 CCAGAATCATCGCCTCCTTCC 60.542 57.143 0.00 0.00 0.00 3.46
2880 3826 1.139654 CAGAATCATCGCCTCCTTCCA 59.860 52.381 0.00 0.00 0.00 3.53
2881 3827 1.139853 AGAATCATCGCCTCCTTCCAC 59.860 52.381 0.00 0.00 0.00 4.02
2882 3828 0.911769 AATCATCGCCTCCTTCCACA 59.088 50.000 0.00 0.00 0.00 4.17
2883 3829 1.135094 ATCATCGCCTCCTTCCACAT 58.865 50.000 0.00 0.00 0.00 3.21
2884 3830 0.465705 TCATCGCCTCCTTCCACATC 59.534 55.000 0.00 0.00 0.00 3.06
2885 3831 0.467384 CATCGCCTCCTTCCACATCT 59.533 55.000 0.00 0.00 0.00 2.90
2886 3832 1.134280 CATCGCCTCCTTCCACATCTT 60.134 52.381 0.00 0.00 0.00 2.40
2887 3833 0.537188 TCGCCTCCTTCCACATCTTC 59.463 55.000 0.00 0.00 0.00 2.87
2888 3834 0.462759 CGCCTCCTTCCACATCTTCC 60.463 60.000 0.00 0.00 0.00 3.46
2889 3835 0.462759 GCCTCCTTCCACATCTTCCG 60.463 60.000 0.00 0.00 0.00 4.30
2890 3836 0.179000 CCTCCTTCCACATCTTCCGG 59.821 60.000 0.00 0.00 0.00 5.14
2891 3837 0.462759 CTCCTTCCACATCTTCCGGC 60.463 60.000 0.00 0.00 0.00 6.13
2892 3838 1.452108 CCTTCCACATCTTCCGGCC 60.452 63.158 0.00 0.00 0.00 6.13
2893 3839 1.452108 CTTCCACATCTTCCGGCCC 60.452 63.158 0.00 0.00 0.00 5.80
2894 3840 2.196997 CTTCCACATCTTCCGGCCCA 62.197 60.000 0.00 0.00 0.00 5.36
2895 3841 2.124570 CCACATCTTCCGGCCCAG 60.125 66.667 0.00 0.00 0.00 4.45
2896 3842 2.669133 CCACATCTTCCGGCCCAGA 61.669 63.158 0.00 0.00 0.00 3.86
2897 3843 1.153289 CACATCTTCCGGCCCAGAG 60.153 63.158 0.00 0.00 0.00 3.35
2898 3844 1.613630 ACATCTTCCGGCCCAGAGT 60.614 57.895 0.00 0.00 0.00 3.24
2899 3845 1.144936 CATCTTCCGGCCCAGAGTC 59.855 63.158 0.00 0.00 0.00 3.36
2900 3846 1.306141 ATCTTCCGGCCCAGAGTCA 60.306 57.895 0.00 0.00 0.00 3.41
2946 3897 7.629157 TGATGTTGATTCTTGTGAACCCTATA 58.371 34.615 0.00 0.00 34.71 1.31
2963 3914 3.449018 CCTATACTGACTTCCTGTGCAGT 59.551 47.826 0.00 0.00 39.03 4.40
3000 3951 5.960811 AGGAGTTAATCTGATCAGAAGTGGA 59.039 40.000 28.40 10.83 41.36 4.02
3135 4088 6.037940 ACTCGAGAGATGTACACGCTAATTTA 59.962 38.462 21.68 0.00 40.84 1.40
3298 4252 2.887337 TCTGTTGATCGCGATTGCTTA 58.113 42.857 24.55 8.29 39.65 3.09
3339 4293 6.533819 TGTTCTTATTGTGTAAGTTCCACG 57.466 37.500 0.00 0.00 35.56 4.94
3434 4402 9.546428 AATTTATTCATTATTAGGGCACTTTGC 57.454 29.630 0.00 0.00 44.08 3.68
3489 4458 6.833416 TCCCAGGAAGATGTGTTATAATTTGG 59.167 38.462 0.00 0.00 0.00 3.28
3540 4509 9.674068 TTGAACCAACATGTGCTATTATTAGTA 57.326 29.630 0.00 0.00 0.00 1.82
3541 4510 9.104965 TGAACCAACATGTGCTATTATTAGTAC 57.895 33.333 0.00 6.07 40.36 2.73
3573 4686 7.813852 AAGAGTAGTAATTTGCGAAGTAGTG 57.186 36.000 11.02 0.00 0.00 2.74
3584 4697 3.889538 TGCGAAGTAGTGCCATACTAGAT 59.110 43.478 0.00 0.00 42.37 1.98
3596 4709 6.435904 GTGCCATACTAGATATCAGAGGAAGT 59.564 42.308 5.32 1.59 0.00 3.01
3645 4762 8.231007 AGTCCTTCCTGATATTCTGATTCTCTA 58.769 37.037 0.00 0.00 0.00 2.43
3740 4857 2.234908 ACCTGCAGTCCTAGTTCACATC 59.765 50.000 13.81 0.00 0.00 3.06
3756 4883 4.971939 TCACATCTGAGATTGTTCAACCA 58.028 39.130 0.00 0.00 0.00 3.67
3809 4940 0.234884 GCACTTCTTTGTTCGACCCG 59.765 55.000 0.00 0.00 0.00 5.28
3833 4964 5.540911 ACAACTTGGATTTTAACATGCCAG 58.459 37.500 0.00 0.00 0.00 4.85
4005 5136 2.629051 GTGTACTATGCTTGTCACCCC 58.371 52.381 0.00 0.00 0.00 4.95
4006 5137 2.027561 GTGTACTATGCTTGTCACCCCA 60.028 50.000 0.00 0.00 0.00 4.96
4007 5138 2.027561 TGTACTATGCTTGTCACCCCAC 60.028 50.000 0.00 0.00 0.00 4.61
4008 5139 0.328258 ACTATGCTTGTCACCCCACC 59.672 55.000 0.00 0.00 0.00 4.61
4009 5140 0.394352 CTATGCTTGTCACCCCACCC 60.394 60.000 0.00 0.00 0.00 4.61
4010 5141 0.844661 TATGCTTGTCACCCCACCCT 60.845 55.000 0.00 0.00 0.00 4.34
4011 5142 1.729267 ATGCTTGTCACCCCACCCTT 61.729 55.000 0.00 0.00 0.00 3.95
4036 5171 6.866480 TGGGAGTTTGATAAATTTGATCAGC 58.134 36.000 0.00 4.36 34.85 4.26
4086 5235 8.217799 TGTGGTAAGATTGCTTTTATATAGGCT 58.782 33.333 0.00 0.00 35.56 4.58
4112 5261 3.641434 AAGCACTGTGCCTATTCTGAT 57.359 42.857 27.74 4.35 46.52 2.90
4117 5266 2.159043 ACTGTGCCTATTCTGATGACCG 60.159 50.000 0.00 0.00 0.00 4.79
4139 5288 7.195646 ACCGATATTATGCATTTTGACTTGTG 58.804 34.615 3.54 0.00 0.00 3.33
4150 5299 4.511617 TTTGACTTGTGTTCTTGCAACA 57.488 36.364 0.00 0.00 0.00 3.33
4159 5308 4.290155 GTGTTCTTGCAACACCTTGTATG 58.710 43.478 8.66 0.00 43.39 2.39
4178 5327 1.271871 TGGGAATGAAACATGCTCGGT 60.272 47.619 0.00 0.00 0.00 4.69
4180 5329 1.062587 GGAATGAAACATGCTCGGTCG 59.937 52.381 0.00 0.00 0.00 4.79
4189 5338 1.258445 ATGCTCGGTCGTCTTTCCCT 61.258 55.000 0.00 0.00 0.00 4.20
4212 5361 1.246649 TTGCATCACACCATCACACC 58.753 50.000 0.00 0.00 0.00 4.16
4213 5362 0.110104 TGCATCACACCATCACACCA 59.890 50.000 0.00 0.00 0.00 4.17
4215 5364 1.820519 GCATCACACCATCACACCATT 59.179 47.619 0.00 0.00 0.00 3.16
4216 5365 2.416296 GCATCACACCATCACACCATTG 60.416 50.000 0.00 0.00 0.00 2.82
4218 5367 2.503331 TCACACCATCACACCATTGTC 58.497 47.619 0.00 0.00 31.66 3.18
4219 5368 2.158696 TCACACCATCACACCATTGTCA 60.159 45.455 0.00 0.00 31.66 3.58
4220 5369 2.030893 CACACCATCACACCATTGTCAC 60.031 50.000 0.00 0.00 31.66 3.67
4221 5370 2.158623 ACACCATCACACCATTGTCACT 60.159 45.455 0.00 0.00 31.66 3.41
4222 5371 3.072330 ACACCATCACACCATTGTCACTA 59.928 43.478 0.00 0.00 31.66 2.74
4223 5372 3.686241 CACCATCACACCATTGTCACTAG 59.314 47.826 0.00 0.00 31.66 2.57
4226 5375 4.761739 CCATCACACCATTGTCACTAGTTT 59.238 41.667 0.00 0.00 31.66 2.66
4227 5376 5.937540 CCATCACACCATTGTCACTAGTTTA 59.062 40.000 0.00 0.00 31.66 2.01
4271 5420 3.388308 CATCACTTGCCTTATCTCCTCG 58.612 50.000 0.00 0.00 0.00 4.63
4281 5430 6.116806 TGCCTTATCTCCTCGAGATATACTC 58.883 44.000 15.71 0.00 46.70 2.59
4414 5564 5.687285 GCATGTCAACTTAAGTGACTTTTGG 59.313 40.000 25.19 15.27 34.03 3.28
4529 5680 0.392461 ACACGGCACACAGAACACTT 60.392 50.000 0.00 0.00 0.00 3.16
4693 5883 2.946762 GTGCGGACTCACCTTTGC 59.053 61.111 0.00 0.00 36.31 3.68
4694 5884 1.598130 GTGCGGACTCACCTTTGCT 60.598 57.895 0.00 0.00 36.31 3.91
4695 5885 1.597854 TGCGGACTCACCTTTGCTG 60.598 57.895 0.00 0.00 36.31 4.41
4696 5886 2.328099 GCGGACTCACCTTTGCTGG 61.328 63.158 0.00 0.00 36.31 4.85
4697 5887 1.071471 CGGACTCACCTTTGCTGGT 59.929 57.895 0.00 0.00 41.77 4.00
4698 5888 0.951040 CGGACTCACCTTTGCTGGTC 60.951 60.000 0.00 0.00 38.45 4.02
4699 5889 0.951040 GGACTCACCTTTGCTGGTCG 60.951 60.000 0.00 0.00 38.45 4.79
4700 5890 1.569479 GACTCACCTTTGCTGGTCGC 61.569 60.000 0.00 0.00 38.45 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 31 4.201744 GCATAGCAAAAATGTTGACCATGC 60.202 41.667 0.00 0.00 32.82 4.06
398 687 8.939929 TGTTTGAAAAATGTTAATCAAGCACAA 58.060 25.926 0.00 0.00 37.85 3.33
399 688 8.484641 TGTTTGAAAAATGTTAATCAAGCACA 57.515 26.923 0.00 0.00 37.85 4.57
678 1018 3.555518 GAACATTCAGCCTCGTTTTGTC 58.444 45.455 0.00 0.00 0.00 3.18
680 1020 2.574322 CGAACATTCAGCCTCGTTTTG 58.426 47.619 0.00 0.00 0.00 2.44
736 1077 0.238289 CCTACACGGTTTGCTTGCTG 59.762 55.000 0.00 0.00 0.00 4.41
749 1139 2.044630 AGGGGGATATAGAGGCCTACAC 59.955 54.545 4.42 0.00 0.00 2.90
751 1141 4.621797 TTAGGGGGATATAGAGGCCTAC 57.378 50.000 4.42 0.00 0.00 3.18
789 1181 8.847816 AGACTTGGTATATAGAGGCCTAGATTA 58.152 37.037 4.42 0.00 30.25 1.75
790 1182 7.617723 CAGACTTGGTATATAGAGGCCTAGATT 59.382 40.741 4.42 0.00 30.25 2.40
791 1183 7.122715 CAGACTTGGTATATAGAGGCCTAGAT 58.877 42.308 4.42 4.38 32.18 1.98
792 1184 6.486056 CAGACTTGGTATATAGAGGCCTAGA 58.514 44.000 4.42 0.00 0.00 2.43
793 1185 5.654650 CCAGACTTGGTATATAGAGGCCTAG 59.345 48.000 4.42 0.00 39.79 3.02
794 1186 5.518546 CCCAGACTTGGTATATAGAGGCCTA 60.519 48.000 4.42 0.00 43.40 3.93
795 1187 4.421131 CCAGACTTGGTATATAGAGGCCT 58.579 47.826 3.86 3.86 39.79 5.19
1026 1424 2.760385 CAGGGAGGTCGGAGGGTC 60.760 72.222 0.00 0.00 0.00 4.46
1061 1459 3.198417 CGGGTAAAGGAGCTAGGGTTTTA 59.802 47.826 0.00 0.00 0.00 1.52
1298 1697 2.203640 AGACCCACAGCGTCTGGA 60.204 61.111 10.80 0.00 39.14 3.86
1333 1732 4.067896 GAGATCAACCAAGCAAACAGAGA 58.932 43.478 0.00 0.00 0.00 3.10
1334 1733 3.190118 GGAGATCAACCAAGCAAACAGAG 59.810 47.826 0.00 0.00 0.00 3.35
1339 1739 0.881118 GCGGAGATCAACCAAGCAAA 59.119 50.000 9.12 0.00 0.00 3.68
1348 1748 2.358957 CACCAAATCAGCGGAGATCAA 58.641 47.619 0.00 0.00 0.00 2.57
1354 1754 0.960364 GAAGCCACCAAATCAGCGGA 60.960 55.000 0.00 0.00 0.00 5.54
1357 1757 0.169009 GACGAAGCCACCAAATCAGC 59.831 55.000 0.00 0.00 0.00 4.26
1374 1774 3.062042 ACACGTCAAACCCTAAATCGAC 58.938 45.455 0.00 0.00 0.00 4.20
1375 1775 3.061322 CACACGTCAAACCCTAAATCGA 58.939 45.455 0.00 0.00 0.00 3.59
1376 1776 2.803956 ACACACGTCAAACCCTAAATCG 59.196 45.455 0.00 0.00 0.00 3.34
1377 1777 3.608474 GCACACACGTCAAACCCTAAATC 60.608 47.826 0.00 0.00 0.00 2.17
1378 1778 2.292292 GCACACACGTCAAACCCTAAAT 59.708 45.455 0.00 0.00 0.00 1.40
1379 1779 1.671845 GCACACACGTCAAACCCTAAA 59.328 47.619 0.00 0.00 0.00 1.85
1382 1782 2.177580 CGCACACACGTCAAACCCT 61.178 57.895 0.00 0.00 0.00 4.34
1383 1783 2.326550 CGCACACACGTCAAACCC 59.673 61.111 0.00 0.00 0.00 4.11
1400 1811 4.000557 CTGCACACACGTGACGCC 62.001 66.667 25.01 8.25 46.80 5.68
1432 1843 4.539509 TGGTACAGTTTGTGCTTAAACG 57.460 40.909 9.61 7.98 43.51 3.60
1558 1970 1.885233 TGCACGATGCTCCAAATCAAA 59.115 42.857 10.54 0.00 45.31 2.69
1589 2002 5.880332 TGGTTCATATGTTCTGCTCTTAACC 59.120 40.000 1.90 5.75 34.58 2.85
1662 2081 4.627467 GCTACTTCACATAGTCAACCAGTG 59.373 45.833 0.00 0.00 0.00 3.66
1705 2125 9.928618 TTATCCCAAATTATGTGGAGATTAACA 57.071 29.630 2.33 0.00 38.54 2.41
1763 2184 6.588719 TCAGAAGGTAACATTTGGAATTGG 57.411 37.500 0.00 0.00 41.41 3.16
1805 2226 4.406069 TCAACATAACTACGCGTCTACAC 58.594 43.478 18.63 0.00 0.00 2.90
1806 2227 4.683501 TCAACATAACTACGCGTCTACA 57.316 40.909 18.63 0.00 0.00 2.74
1807 2228 5.032863 ACATCAACATAACTACGCGTCTAC 58.967 41.667 18.63 0.00 0.00 2.59
1808 2229 5.239359 ACATCAACATAACTACGCGTCTA 57.761 39.130 18.63 6.55 0.00 2.59
1809 2230 4.106029 ACATCAACATAACTACGCGTCT 57.894 40.909 18.63 3.99 0.00 4.18
1810 2231 5.937165 TTACATCAACATAACTACGCGTC 57.063 39.130 18.63 0.00 0.00 5.19
1811 2232 6.311935 ACAATTACATCAACATAACTACGCGT 59.688 34.615 19.17 19.17 0.00 6.01
1812 2233 6.623353 CACAATTACATCAACATAACTACGCG 59.377 38.462 3.53 3.53 0.00 6.01
1840 2261 2.147150 GACTGCCACAAGAAGAGGAAC 58.853 52.381 0.00 0.00 0.00 3.62
1854 2275 6.690194 AATATGATTCTGAAACAGACTGCC 57.310 37.500 1.25 0.00 40.46 4.85
1933 2359 6.381420 TGGTAAGAAGACAGAAGGATAGAAGG 59.619 42.308 0.00 0.00 0.00 3.46
1934 2360 7.262048 GTGGTAAGAAGACAGAAGGATAGAAG 58.738 42.308 0.00 0.00 0.00 2.85
1935 2361 6.154706 GGTGGTAAGAAGACAGAAGGATAGAA 59.845 42.308 0.00 0.00 0.00 2.10
1937 2363 5.163395 GGGTGGTAAGAAGACAGAAGGATAG 60.163 48.000 0.00 0.00 0.00 2.08
1952 2378 5.690865 TCAGCAAATATAAGGGGTGGTAAG 58.309 41.667 0.00 0.00 0.00 2.34
2118 2704 4.753233 ACGGAAGAGATCACAGAAAGATG 58.247 43.478 0.00 0.00 0.00 2.90
2134 2723 5.086058 GCATTGTAACACATGTAACGGAAG 58.914 41.667 0.00 0.00 0.00 3.46
2256 3156 7.944729 ACCAAAGCTGATAATTCACTGTTAT 57.055 32.000 0.00 0.00 0.00 1.89
2257 3157 7.446931 TGAACCAAAGCTGATAATTCACTGTTA 59.553 33.333 0.00 0.00 0.00 2.41
2258 3158 6.265196 TGAACCAAAGCTGATAATTCACTGTT 59.735 34.615 0.00 0.00 0.00 3.16
2259 3159 5.769662 TGAACCAAAGCTGATAATTCACTGT 59.230 36.000 0.00 0.00 0.00 3.55
2260 3160 6.072286 ACTGAACCAAAGCTGATAATTCACTG 60.072 38.462 0.00 0.00 0.00 3.66
2261 3161 6.006449 ACTGAACCAAAGCTGATAATTCACT 58.994 36.000 0.00 0.00 0.00 3.41
2262 3162 6.072508 TGACTGAACCAAAGCTGATAATTCAC 60.073 38.462 0.00 0.00 0.00 3.18
2263 3163 6.003326 TGACTGAACCAAAGCTGATAATTCA 58.997 36.000 0.00 0.00 0.00 2.57
2264 3164 6.372659 TCTGACTGAACCAAAGCTGATAATTC 59.627 38.462 0.00 0.00 0.00 2.17
2265 3165 6.240894 TCTGACTGAACCAAAGCTGATAATT 58.759 36.000 0.00 0.00 0.00 1.40
2266 3166 5.809001 TCTGACTGAACCAAAGCTGATAAT 58.191 37.500 0.00 0.00 0.00 1.28
2267 3167 5.227569 TCTGACTGAACCAAAGCTGATAA 57.772 39.130 0.00 0.00 0.00 1.75
2268 3168 4.890158 TCTGACTGAACCAAAGCTGATA 57.110 40.909 0.00 0.00 0.00 2.15
2269 3169 3.777106 TCTGACTGAACCAAAGCTGAT 57.223 42.857 0.00 0.00 0.00 2.90
2270 3170 3.206150 GTTCTGACTGAACCAAAGCTGA 58.794 45.455 12.82 0.00 46.89 4.26
2271 3171 3.615849 GTTCTGACTGAACCAAAGCTG 57.384 47.619 12.82 0.00 46.89 4.24
2280 3180 1.550524 CATCCGAGGGTTCTGACTGAA 59.449 52.381 0.00 0.00 0.00 3.02
2291 3191 6.062095 ACCAAAGATTAAATACATCCGAGGG 58.938 40.000 0.00 0.00 0.00 4.30
2450 3394 8.208903 ACCTTTCCAAAGCATATACGTACTAAT 58.791 33.333 0.00 0.00 34.69 1.73
2592 3538 2.592102 ACATCTTTCCATGGTGTGCT 57.408 45.000 12.58 0.00 0.00 4.40
2593 3539 4.675510 CAATACATCTTTCCATGGTGTGC 58.324 43.478 12.58 0.00 0.00 4.57
2594 3540 4.158209 TGCAATACATCTTTCCATGGTGTG 59.842 41.667 12.58 7.26 0.00 3.82
2595 3541 4.343231 TGCAATACATCTTTCCATGGTGT 58.657 39.130 12.58 10.86 0.00 4.16
2596 3542 4.987408 TGCAATACATCTTTCCATGGTG 57.013 40.909 12.58 4.55 0.00 4.17
2614 3560 6.585416 TCATACTCTTGCTTCTTATGATGCA 58.415 36.000 13.24 13.24 46.88 3.96
2615 3561 7.488187 TTCATACTCTTGCTTCTTATGATGC 57.512 36.000 8.95 8.95 41.84 3.91
2616 3562 7.226128 TGCTTCATACTCTTGCTTCTTATGATG 59.774 37.037 0.00 0.00 31.05 3.07
2617 3563 7.278135 TGCTTCATACTCTTGCTTCTTATGAT 58.722 34.615 0.00 0.00 31.05 2.45
2618 3564 6.643388 TGCTTCATACTCTTGCTTCTTATGA 58.357 36.000 0.00 0.00 0.00 2.15
2619 3565 6.915544 TGCTTCATACTCTTGCTTCTTATG 57.084 37.500 0.00 0.00 0.00 1.90
2620 3566 7.928307 TTTGCTTCATACTCTTGCTTCTTAT 57.072 32.000 0.00 0.00 0.00 1.73
2621 3567 7.308589 GGTTTTGCTTCATACTCTTGCTTCTTA 60.309 37.037 0.00 0.00 0.00 2.10
2622 3568 6.442112 GTTTTGCTTCATACTCTTGCTTCTT 58.558 36.000 0.00 0.00 0.00 2.52
2623 3569 5.048434 GGTTTTGCTTCATACTCTTGCTTCT 60.048 40.000 0.00 0.00 0.00 2.85
2624 3570 5.157067 GGTTTTGCTTCATACTCTTGCTTC 58.843 41.667 0.00 0.00 0.00 3.86
2625 3571 4.584325 TGGTTTTGCTTCATACTCTTGCTT 59.416 37.500 0.00 0.00 0.00 3.91
2626 3572 4.144297 TGGTTTTGCTTCATACTCTTGCT 58.856 39.130 0.00 0.00 0.00 3.91
2627 3573 4.503741 TGGTTTTGCTTCATACTCTTGC 57.496 40.909 0.00 0.00 0.00 4.01
2628 3574 6.258230 TCATGGTTTTGCTTCATACTCTTG 57.742 37.500 0.00 0.00 0.00 3.02
2629 3575 6.899393 TTCATGGTTTTGCTTCATACTCTT 57.101 33.333 0.00 0.00 0.00 2.85
2630 3576 6.491403 AGTTTCATGGTTTTGCTTCATACTCT 59.509 34.615 0.00 0.00 0.00 3.24
2631 3577 6.681777 AGTTTCATGGTTTTGCTTCATACTC 58.318 36.000 0.00 0.00 0.00 2.59
2632 3578 6.655078 AGTTTCATGGTTTTGCTTCATACT 57.345 33.333 0.00 0.00 0.00 2.12
2633 3579 6.701400 ACAAGTTTCATGGTTTTGCTTCATAC 59.299 34.615 0.00 0.00 0.00 2.39
2634 3580 6.700960 CACAAGTTTCATGGTTTTGCTTCATA 59.299 34.615 0.00 0.00 0.00 2.15
2635 3581 5.524646 CACAAGTTTCATGGTTTTGCTTCAT 59.475 36.000 0.00 0.00 0.00 2.57
2636 3582 4.869297 CACAAGTTTCATGGTTTTGCTTCA 59.131 37.500 0.00 0.00 0.00 3.02
2637 3583 4.260334 GCACAAGTTTCATGGTTTTGCTTC 60.260 41.667 0.00 0.00 0.00 3.86
2638 3584 3.622612 GCACAAGTTTCATGGTTTTGCTT 59.377 39.130 0.00 0.00 0.00 3.91
2639 3585 3.197265 GCACAAGTTTCATGGTTTTGCT 58.803 40.909 0.00 0.00 0.00 3.91
2640 3586 2.935201 TGCACAAGTTTCATGGTTTTGC 59.065 40.909 0.00 0.00 0.00 3.68
2641 3587 4.391216 TGTTGCACAAGTTTCATGGTTTTG 59.609 37.500 0.00 0.00 0.00 2.44
2642 3588 4.573900 TGTTGCACAAGTTTCATGGTTTT 58.426 34.783 0.00 0.00 0.00 2.43
2643 3589 4.081752 TCTGTTGCACAAGTTTCATGGTTT 60.082 37.500 0.00 0.00 0.00 3.27
2644 3590 3.446873 TCTGTTGCACAAGTTTCATGGTT 59.553 39.130 0.00 0.00 0.00 3.67
2645 3591 3.023119 TCTGTTGCACAAGTTTCATGGT 58.977 40.909 0.00 0.00 0.00 3.55
2646 3592 3.067180 ACTCTGTTGCACAAGTTTCATGG 59.933 43.478 0.00 0.00 0.00 3.66
2647 3593 4.297299 ACTCTGTTGCACAAGTTTCATG 57.703 40.909 0.00 0.00 0.00 3.07
2648 3594 6.262944 TGATTACTCTGTTGCACAAGTTTCAT 59.737 34.615 0.00 0.00 0.00 2.57
2649 3595 5.588246 TGATTACTCTGTTGCACAAGTTTCA 59.412 36.000 0.00 1.19 0.00 2.69
2650 3596 6.017934 TCTGATTACTCTGTTGCACAAGTTTC 60.018 38.462 0.00 0.00 0.00 2.78
2651 3597 5.822519 TCTGATTACTCTGTTGCACAAGTTT 59.177 36.000 0.00 0.00 0.00 2.66
2652 3598 5.237344 GTCTGATTACTCTGTTGCACAAGTT 59.763 40.000 0.00 0.00 0.00 2.66
2653 3599 4.752101 GTCTGATTACTCTGTTGCACAAGT 59.248 41.667 0.00 0.00 0.00 3.16
2654 3600 4.993584 AGTCTGATTACTCTGTTGCACAAG 59.006 41.667 0.00 0.00 0.00 3.16
2655 3601 4.960938 AGTCTGATTACTCTGTTGCACAA 58.039 39.130 0.00 0.00 0.00 3.33
2656 3602 4.607293 AGTCTGATTACTCTGTTGCACA 57.393 40.909 0.00 0.00 0.00 4.57
2657 3603 4.564769 GCTAGTCTGATTACTCTGTTGCAC 59.435 45.833 0.00 0.00 0.00 4.57
2658 3604 4.464244 AGCTAGTCTGATTACTCTGTTGCA 59.536 41.667 0.00 0.00 0.00 4.08
2659 3605 5.004922 AGCTAGTCTGATTACTCTGTTGC 57.995 43.478 0.00 0.00 0.00 4.17
2660 3606 6.183360 TGCTAGCTAGTCTGATTACTCTGTTG 60.183 42.308 21.62 0.00 0.00 3.33
2661 3607 5.888724 TGCTAGCTAGTCTGATTACTCTGTT 59.111 40.000 21.62 0.00 0.00 3.16
2662 3608 5.441500 TGCTAGCTAGTCTGATTACTCTGT 58.558 41.667 21.62 0.00 0.00 3.41
2663 3609 6.573664 ATGCTAGCTAGTCTGATTACTCTG 57.426 41.667 21.62 0.00 0.00 3.35
2664 3610 6.015519 CCAATGCTAGCTAGTCTGATTACTCT 60.016 42.308 21.62 0.00 0.00 3.24
2665 3611 6.155827 CCAATGCTAGCTAGTCTGATTACTC 58.844 44.000 21.62 2.01 0.00 2.59
2666 3612 5.510520 GCCAATGCTAGCTAGTCTGATTACT 60.511 44.000 21.62 0.00 33.53 2.24
2667 3613 4.688413 GCCAATGCTAGCTAGTCTGATTAC 59.312 45.833 21.62 3.42 33.53 1.89
2668 3614 4.262635 GGCCAATGCTAGCTAGTCTGATTA 60.263 45.833 21.62 1.44 37.74 1.75
2669 3615 3.495806 GGCCAATGCTAGCTAGTCTGATT 60.496 47.826 21.62 11.78 37.74 2.57
2670 3616 2.038295 GGCCAATGCTAGCTAGTCTGAT 59.962 50.000 21.62 6.73 37.74 2.90
2671 3617 1.414181 GGCCAATGCTAGCTAGTCTGA 59.586 52.381 21.62 4.69 37.74 3.27
2672 3618 1.139654 TGGCCAATGCTAGCTAGTCTG 59.860 52.381 21.62 15.12 37.74 3.51
2673 3619 1.139853 GTGGCCAATGCTAGCTAGTCT 59.860 52.381 21.62 6.97 37.74 3.24
2674 3620 1.587547 GTGGCCAATGCTAGCTAGTC 58.412 55.000 21.62 14.14 37.74 2.59
2675 3621 0.181350 GGTGGCCAATGCTAGCTAGT 59.819 55.000 21.62 0.00 42.50 2.57
2676 3622 0.181114 TGGTGGCCAATGCTAGCTAG 59.819 55.000 16.84 16.84 45.57 3.42
2677 3623 0.846015 ATGGTGGCCAATGCTAGCTA 59.154 50.000 17.23 2.58 45.57 3.32
2678 3624 0.846015 TATGGTGGCCAATGCTAGCT 59.154 50.000 17.23 0.00 45.57 3.32
2679 3625 1.610522 CTTATGGTGGCCAATGCTAGC 59.389 52.381 7.24 8.10 45.57 3.42
2680 3626 2.936202 ACTTATGGTGGCCAATGCTAG 58.064 47.619 7.24 5.37 36.95 3.42
2681 3627 3.380471 AACTTATGGTGGCCAATGCTA 57.620 42.857 7.24 0.00 36.95 3.49
2682 3628 2.236489 AACTTATGGTGGCCAATGCT 57.764 45.000 7.24 0.00 36.95 3.79
2683 3629 4.670896 ATTAACTTATGGTGGCCAATGC 57.329 40.909 7.24 0.00 36.95 3.56
2684 3630 9.612066 ATTTTAATTAACTTATGGTGGCCAATG 57.388 29.630 7.24 0.00 36.95 2.82
2685 3631 9.612066 CATTTTAATTAACTTATGGTGGCCAAT 57.388 29.630 7.24 0.00 36.95 3.16
2686 3632 8.816894 TCATTTTAATTAACTTATGGTGGCCAA 58.183 29.630 7.24 0.00 36.95 4.52
2687 3633 8.367660 TCATTTTAATTAACTTATGGTGGCCA 57.632 30.769 0.00 0.00 38.19 5.36
2688 3634 8.691797 TCTCATTTTAATTAACTTATGGTGGCC 58.308 33.333 0.00 0.00 0.00 5.36
2709 3655 9.354673 TGTTTGACTTCTCCTTTATTTTCTCAT 57.645 29.630 0.00 0.00 0.00 2.90
2710 3656 8.746052 TGTTTGACTTCTCCTTTATTTTCTCA 57.254 30.769 0.00 0.00 0.00 3.27
2712 3658 9.971922 CATTGTTTGACTTCTCCTTTATTTTCT 57.028 29.630 0.00 0.00 0.00 2.52
2713 3659 9.196552 CCATTGTTTGACTTCTCCTTTATTTTC 57.803 33.333 0.00 0.00 0.00 2.29
2714 3660 8.704668 ACCATTGTTTGACTTCTCCTTTATTTT 58.295 29.630 0.00 0.00 0.00 1.82
2715 3661 8.250143 ACCATTGTTTGACTTCTCCTTTATTT 57.750 30.769 0.00 0.00 0.00 1.40
2716 3662 7.505585 TGACCATTGTTTGACTTCTCCTTTATT 59.494 33.333 0.00 0.00 0.00 1.40
2717 3663 7.004086 TGACCATTGTTTGACTTCTCCTTTAT 58.996 34.615 0.00 0.00 0.00 1.40
2718 3664 6.361433 TGACCATTGTTTGACTTCTCCTTTA 58.639 36.000 0.00 0.00 0.00 1.85
2719 3665 5.200483 TGACCATTGTTTGACTTCTCCTTT 58.800 37.500 0.00 0.00 0.00 3.11
2720 3666 4.792068 TGACCATTGTTTGACTTCTCCTT 58.208 39.130 0.00 0.00 0.00 3.36
2721 3667 4.437682 TGACCATTGTTTGACTTCTCCT 57.562 40.909 0.00 0.00 0.00 3.69
2722 3668 4.338118 TGTTGACCATTGTTTGACTTCTCC 59.662 41.667 0.00 0.00 0.00 3.71
2723 3669 5.499139 TGTTGACCATTGTTTGACTTCTC 57.501 39.130 0.00 0.00 0.00 2.87
2724 3670 5.913137 TTGTTGACCATTGTTTGACTTCT 57.087 34.783 0.00 0.00 0.00 2.85
2725 3671 6.272318 TGATTGTTGACCATTGTTTGACTTC 58.728 36.000 0.00 0.00 0.00 3.01
2726 3672 6.219417 TGATTGTTGACCATTGTTTGACTT 57.781 33.333 0.00 0.00 0.00 3.01
2727 3673 5.850557 TGATTGTTGACCATTGTTTGACT 57.149 34.783 0.00 0.00 0.00 3.41
2728 3674 8.761575 ATTATGATTGTTGACCATTGTTTGAC 57.238 30.769 0.00 0.00 0.00 3.18
2736 3682 9.699410 TCCTTTTCTATTATGATTGTTGACCAT 57.301 29.630 0.00 0.00 0.00 3.55
2737 3683 8.956426 GTCCTTTTCTATTATGATTGTTGACCA 58.044 33.333 0.00 0.00 0.00 4.02
2738 3684 8.122952 CGTCCTTTTCTATTATGATTGTTGACC 58.877 37.037 0.00 0.00 0.00 4.02
2739 3685 8.879759 TCGTCCTTTTCTATTATGATTGTTGAC 58.120 33.333 0.00 0.00 0.00 3.18
2740 3686 9.098355 CTCGTCCTTTTCTATTATGATTGTTGA 57.902 33.333 0.00 0.00 0.00 3.18
2741 3687 8.338259 CCTCGTCCTTTTCTATTATGATTGTTG 58.662 37.037 0.00 0.00 0.00 3.33
2742 3688 8.265055 TCCTCGTCCTTTTCTATTATGATTGTT 58.735 33.333 0.00 0.00 0.00 2.83
2743 3689 7.792032 TCCTCGTCCTTTTCTATTATGATTGT 58.208 34.615 0.00 0.00 0.00 2.71
2744 3690 8.662781 TTCCTCGTCCTTTTCTATTATGATTG 57.337 34.615 0.00 0.00 0.00 2.67
2745 3691 9.853177 AATTCCTCGTCCTTTTCTATTATGATT 57.147 29.630 0.00 0.00 0.00 2.57
2782 3728 9.778741 TGACCACTTCATACCTATAAATCATTC 57.221 33.333 0.00 0.00 0.00 2.67
2784 3730 9.730705 CATGACCACTTCATACCTATAAATCAT 57.269 33.333 0.00 0.00 43.68 2.45
2785 3731 7.661437 GCATGACCACTTCATACCTATAAATCA 59.339 37.037 0.00 0.00 43.68 2.57
2786 3732 7.119846 GGCATGACCACTTCATACCTATAAATC 59.880 40.741 0.00 0.00 43.68 2.17
2787 3733 6.942576 GGCATGACCACTTCATACCTATAAAT 59.057 38.462 0.00 0.00 43.68 1.40
2788 3734 6.126623 TGGCATGACCACTTCATACCTATAAA 60.127 38.462 0.00 0.00 45.60 1.40
2789 3735 5.368230 TGGCATGACCACTTCATACCTATAA 59.632 40.000 0.00 0.00 45.60 0.98
2790 3736 4.904853 TGGCATGACCACTTCATACCTATA 59.095 41.667 0.00 0.00 45.60 1.31
2791 3737 3.716353 TGGCATGACCACTTCATACCTAT 59.284 43.478 0.00 0.00 45.60 2.57
2792 3738 3.111484 TGGCATGACCACTTCATACCTA 58.889 45.455 0.00 0.00 45.60 3.08
2793 3739 1.915489 TGGCATGACCACTTCATACCT 59.085 47.619 0.00 0.00 45.60 3.08
2794 3740 2.418368 TGGCATGACCACTTCATACC 57.582 50.000 0.00 0.00 46.36 2.73
2804 3750 2.238847 TAGGTGAGCGTGGCATGACC 62.239 60.000 11.71 9.40 39.84 4.02
2805 3751 1.084370 GTAGGTGAGCGTGGCATGAC 61.084 60.000 11.71 0.00 0.00 3.06
2806 3752 1.218047 GTAGGTGAGCGTGGCATGA 59.782 57.895 11.71 0.00 0.00 3.07
2807 3753 1.079197 TGTAGGTGAGCGTGGCATG 60.079 57.895 1.31 1.31 0.00 4.06
2808 3754 1.079127 GTGTAGGTGAGCGTGGCAT 60.079 57.895 0.00 0.00 0.00 4.40
2809 3755 2.342279 GTGTAGGTGAGCGTGGCA 59.658 61.111 0.00 0.00 0.00 4.92
2810 3756 2.434359 GGTGTAGGTGAGCGTGGC 60.434 66.667 0.00 0.00 0.00 5.01
2811 3757 0.821517 TATGGTGTAGGTGAGCGTGG 59.178 55.000 0.00 0.00 0.00 4.94
2812 3758 1.797713 CGTATGGTGTAGGTGAGCGTG 60.798 57.143 0.00 0.00 0.00 5.34
2813 3759 0.454600 CGTATGGTGTAGGTGAGCGT 59.545 55.000 0.00 0.00 0.00 5.07
2814 3760 0.248907 CCGTATGGTGTAGGTGAGCG 60.249 60.000 0.00 0.00 0.00 5.03
2815 3761 0.104304 CCCGTATGGTGTAGGTGAGC 59.896 60.000 0.00 0.00 0.00 4.26
2816 3762 0.104304 GCCCGTATGGTGTAGGTGAG 59.896 60.000 0.00 0.00 36.04 3.51
2817 3763 0.324923 AGCCCGTATGGTGTAGGTGA 60.325 55.000 0.00 0.00 36.04 4.02
2818 3764 1.340248 CTAGCCCGTATGGTGTAGGTG 59.660 57.143 0.00 0.00 36.04 4.00
2819 3765 1.063417 ACTAGCCCGTATGGTGTAGGT 60.063 52.381 0.00 0.00 36.04 3.08
2820 3766 1.340248 CACTAGCCCGTATGGTGTAGG 59.660 57.143 0.00 0.00 36.04 3.18
2821 3767 2.029623 ACACTAGCCCGTATGGTGTAG 58.970 52.381 0.00 3.05 40.15 2.74
2822 3768 2.026641 GACACTAGCCCGTATGGTGTA 58.973 52.381 0.00 0.00 41.73 2.90
2823 3769 0.822164 GACACTAGCCCGTATGGTGT 59.178 55.000 0.00 0.00 43.98 4.16
2824 3770 0.821517 TGACACTAGCCCGTATGGTG 59.178 55.000 0.00 0.00 35.47 4.17
2825 3771 1.687123 GATGACACTAGCCCGTATGGT 59.313 52.381 0.00 0.00 36.04 3.55
2826 3772 1.964223 AGATGACACTAGCCCGTATGG 59.036 52.381 0.00 0.00 37.09 2.74
2827 3773 2.362397 ACAGATGACACTAGCCCGTATG 59.638 50.000 0.00 0.00 0.00 2.39
2828 3774 2.623889 GACAGATGACACTAGCCCGTAT 59.376 50.000 0.00 0.00 0.00 3.06
2829 3775 2.022195 GACAGATGACACTAGCCCGTA 58.978 52.381 0.00 0.00 0.00 4.02
2830 3776 0.818296 GACAGATGACACTAGCCCGT 59.182 55.000 0.00 0.00 0.00 5.28
2831 3777 1.066303 GAGACAGATGACACTAGCCCG 59.934 57.143 0.00 0.00 0.00 6.13
2832 3778 2.383855 AGAGACAGATGACACTAGCCC 58.616 52.381 0.00 0.00 0.00 5.19
2833 3779 3.181480 GGAAGAGACAGATGACACTAGCC 60.181 52.174 0.00 0.00 0.00 3.93
2834 3780 3.699038 AGGAAGAGACAGATGACACTAGC 59.301 47.826 0.00 0.00 0.00 3.42
2835 3781 4.439974 GCAGGAAGAGACAGATGACACTAG 60.440 50.000 0.00 0.00 0.00 2.57
2836 3782 3.445450 GCAGGAAGAGACAGATGACACTA 59.555 47.826 0.00 0.00 0.00 2.74
2837 3783 2.233431 GCAGGAAGAGACAGATGACACT 59.767 50.000 0.00 0.00 0.00 3.55
2838 3784 2.615869 GCAGGAAGAGACAGATGACAC 58.384 52.381 0.00 0.00 0.00 3.67
2839 3785 1.552337 GGCAGGAAGAGACAGATGACA 59.448 52.381 0.00 0.00 0.00 3.58
2840 3786 1.134551 GGGCAGGAAGAGACAGATGAC 60.135 57.143 0.00 0.00 0.00 3.06
2841 3787 1.198713 GGGCAGGAAGAGACAGATGA 58.801 55.000 0.00 0.00 0.00 2.92
2842 3788 0.907486 TGGGCAGGAAGAGACAGATG 59.093 55.000 0.00 0.00 0.00 2.90
2843 3789 1.202330 CTGGGCAGGAAGAGACAGAT 58.798 55.000 0.00 0.00 0.00 2.90
2844 3790 0.115152 TCTGGGCAGGAAGAGACAGA 59.885 55.000 0.00 0.00 33.05 3.41
2845 3791 0.979665 TTCTGGGCAGGAAGAGACAG 59.020 55.000 0.00 0.00 0.00 3.51
2846 3792 1.556911 GATTCTGGGCAGGAAGAGACA 59.443 52.381 0.00 0.00 0.00 3.41
2847 3793 1.556911 TGATTCTGGGCAGGAAGAGAC 59.443 52.381 0.00 0.00 0.00 3.36
2848 3794 1.956869 TGATTCTGGGCAGGAAGAGA 58.043 50.000 0.00 0.00 0.00 3.10
2849 3795 2.806019 CGATGATTCTGGGCAGGAAGAG 60.806 54.545 0.00 0.00 0.00 2.85
2850 3796 1.139654 CGATGATTCTGGGCAGGAAGA 59.860 52.381 0.00 0.00 0.00 2.87
2851 3797 1.590932 CGATGATTCTGGGCAGGAAG 58.409 55.000 0.00 0.00 0.00 3.46
2852 3798 0.464373 GCGATGATTCTGGGCAGGAA 60.464 55.000 0.00 0.00 0.00 3.36
2853 3799 1.146930 GCGATGATTCTGGGCAGGA 59.853 57.895 0.00 0.00 0.00 3.86
2854 3800 1.895707 GGCGATGATTCTGGGCAGG 60.896 63.158 0.00 0.00 0.00 4.85
2855 3801 0.883814 GAGGCGATGATTCTGGGCAG 60.884 60.000 0.00 0.00 0.00 4.85
2856 3802 1.146930 GAGGCGATGATTCTGGGCA 59.853 57.895 0.00 0.00 0.00 5.36
2857 3803 1.599240 GGAGGCGATGATTCTGGGC 60.599 63.158 0.00 0.00 0.00 5.36
2858 3804 0.471617 AAGGAGGCGATGATTCTGGG 59.528 55.000 0.00 0.00 0.00 4.45
2859 3805 1.542108 GGAAGGAGGCGATGATTCTGG 60.542 57.143 0.00 0.00 0.00 3.86
2860 3806 1.139654 TGGAAGGAGGCGATGATTCTG 59.860 52.381 0.00 0.00 0.00 3.02
2861 3807 1.139853 GTGGAAGGAGGCGATGATTCT 59.860 52.381 0.00 0.00 0.00 2.40
2862 3808 1.134401 TGTGGAAGGAGGCGATGATTC 60.134 52.381 0.00 0.00 0.00 2.52
2863 3809 0.911769 TGTGGAAGGAGGCGATGATT 59.088 50.000 0.00 0.00 0.00 2.57
2864 3810 1.071385 GATGTGGAAGGAGGCGATGAT 59.929 52.381 0.00 0.00 0.00 2.45
2865 3811 0.465705 GATGTGGAAGGAGGCGATGA 59.534 55.000 0.00 0.00 0.00 2.92
2866 3812 0.467384 AGATGTGGAAGGAGGCGATG 59.533 55.000 0.00 0.00 0.00 3.84
2867 3813 1.139853 GAAGATGTGGAAGGAGGCGAT 59.860 52.381 0.00 0.00 0.00 4.58
2868 3814 0.537188 GAAGATGTGGAAGGAGGCGA 59.463 55.000 0.00 0.00 0.00 5.54
2869 3815 0.462759 GGAAGATGTGGAAGGAGGCG 60.463 60.000 0.00 0.00 0.00 5.52
2870 3816 0.462759 CGGAAGATGTGGAAGGAGGC 60.463 60.000 0.00 0.00 0.00 4.70
2871 3817 0.179000 CCGGAAGATGTGGAAGGAGG 59.821 60.000 0.00 0.00 0.00 4.30
2872 3818 0.462759 GCCGGAAGATGTGGAAGGAG 60.463 60.000 5.05 0.00 0.00 3.69
2873 3819 1.602237 GCCGGAAGATGTGGAAGGA 59.398 57.895 5.05 0.00 0.00 3.36
2874 3820 1.452108 GGCCGGAAGATGTGGAAGG 60.452 63.158 5.05 0.00 0.00 3.46
2875 3821 1.452108 GGGCCGGAAGATGTGGAAG 60.452 63.158 5.05 0.00 0.00 3.46
2876 3822 2.196997 CTGGGCCGGAAGATGTGGAA 62.197 60.000 6.48 0.00 0.00 3.53
2877 3823 2.609299 TGGGCCGGAAGATGTGGA 60.609 61.111 5.05 0.00 0.00 4.02
2878 3824 2.124570 CTGGGCCGGAAGATGTGG 60.125 66.667 6.48 0.00 0.00 4.17
2879 3825 1.153289 CTCTGGGCCGGAAGATGTG 60.153 63.158 17.43 0.00 0.00 3.21
2880 3826 1.613630 ACTCTGGGCCGGAAGATGT 60.614 57.895 17.43 7.87 0.00 3.06
2881 3827 1.144936 GACTCTGGGCCGGAAGATG 59.855 63.158 17.43 7.17 0.00 2.90
2882 3828 0.692419 ATGACTCTGGGCCGGAAGAT 60.692 55.000 17.43 4.75 0.00 2.40
2883 3829 1.306141 ATGACTCTGGGCCGGAAGA 60.306 57.895 17.43 4.03 0.00 2.87
2884 3830 1.144936 GATGACTCTGGGCCGGAAG 59.855 63.158 17.43 12.75 0.00 3.46
2885 3831 0.982852 ATGATGACTCTGGGCCGGAA 60.983 55.000 17.43 1.46 0.00 4.30
2886 3832 1.383109 ATGATGACTCTGGGCCGGA 60.383 57.895 15.74 15.74 0.00 5.14
2887 3833 1.227764 CATGATGACTCTGGGCCGG 60.228 63.158 5.83 5.83 0.00 6.13
2888 3834 0.531532 GACATGATGACTCTGGGCCG 60.532 60.000 0.00 0.00 0.00 6.13
2889 3835 0.835941 AGACATGATGACTCTGGGCC 59.164 55.000 0.00 0.00 0.00 5.80
2890 3836 1.761784 AGAGACATGATGACTCTGGGC 59.238 52.381 22.88 0.28 45.13 5.36
2891 3837 3.450096 TCAAGAGACATGATGACTCTGGG 59.550 47.826 23.88 19.14 45.87 4.45
2892 3838 4.732672 TCAAGAGACATGATGACTCTGG 57.267 45.455 23.88 21.41 45.87 3.86
2893 3839 6.803642 TGTATCAAGAGACATGATGACTCTG 58.196 40.000 23.88 17.96 45.87 3.35
2946 3897 4.357918 AATAACTGCACAGGAAGTCAGT 57.642 40.909 2.21 0.00 39.01 3.41
2993 3944 3.117888 TCCCTGCATAAAGGATCCACTTC 60.118 47.826 15.82 0.00 40.02 3.01
3000 3951 2.687914 GCCAGTTCCCTGCATAAAGGAT 60.688 50.000 0.00 0.00 40.02 3.24
3154 4107 7.494922 AAGGGAAATTACCATAGCATTTTGT 57.505 32.000 0.00 0.00 0.00 2.83
3220 4173 4.581409 TCTTCGGGTTCCTTTACCAAAAAG 59.419 41.667 0.00 0.00 40.09 2.27
3298 4252 2.070573 ACATAACCTCCCCAACCACTT 58.929 47.619 0.00 0.00 0.00 3.16
3434 4402 8.166706 GCAAATTTAGAGATGAACTTTTGCATG 58.833 33.333 11.02 0.00 42.24 4.06
3540 4509 8.418662 TCGCAAATTACTACTCTTATATGGTGT 58.581 33.333 0.00 0.00 0.00 4.16
3541 4510 8.812147 TCGCAAATTACTACTCTTATATGGTG 57.188 34.615 0.00 0.00 0.00 4.17
3542 4511 9.477484 CTTCGCAAATTACTACTCTTATATGGT 57.523 33.333 0.00 0.00 0.00 3.55
3543 4512 9.477484 ACTTCGCAAATTACTACTCTTATATGG 57.523 33.333 0.00 0.00 0.00 2.74
3573 4686 7.319646 CAACTTCCTCTGATATCTAGTATGGC 58.680 42.308 3.98 0.00 0.00 4.40
3584 4697 2.356125 GGGCAAGCAACTTCCTCTGATA 60.356 50.000 0.00 0.00 0.00 2.15
3596 4709 0.332632 AAGGCATAGAGGGCAAGCAA 59.667 50.000 0.00 0.00 35.46 3.91
3645 4762 1.000274 GCGTTCTGCAACCAGGAAAAT 60.000 47.619 0.00 0.00 45.45 1.82
3740 4857 5.049828 GGGTTTTTGGTTGAACAATCTCAG 58.950 41.667 0.00 0.00 0.00 3.35
3756 4883 4.618920 AGAGTAGATCACACGGGTTTTT 57.381 40.909 0.00 0.00 0.00 1.94
3809 4940 5.537188 TGGCATGTTAAAATCCAAGTTGTC 58.463 37.500 1.45 0.00 0.00 3.18
3833 4964 9.199982 ACACATGATTTCAATTTCAGATTTCAC 57.800 29.630 0.00 0.00 0.00 3.18
3872 5003 2.280628 GGAGGCTGTAATTCTGGAACG 58.719 52.381 0.00 0.00 0.00 3.95
4005 5136 6.358974 AATTTATCAAACTCCCAAAGGGTG 57.641 37.500 1.36 2.10 44.74 4.61
4006 5137 6.556874 TCAAATTTATCAAACTCCCAAAGGGT 59.443 34.615 1.36 0.00 44.74 4.34
4007 5138 7.003402 TCAAATTTATCAAACTCCCAAAGGG 57.997 36.000 0.00 0.00 46.11 3.95
4008 5139 8.313292 TGATCAAATTTATCAAACTCCCAAAGG 58.687 33.333 0.00 0.00 30.52 3.11
4009 5140 9.362539 CTGATCAAATTTATCAAACTCCCAAAG 57.637 33.333 0.00 0.00 33.13 2.77
4010 5141 7.818930 GCTGATCAAATTTATCAAACTCCCAAA 59.181 33.333 0.00 0.00 33.13 3.28
4011 5142 7.322664 GCTGATCAAATTTATCAAACTCCCAA 58.677 34.615 0.00 0.00 33.13 4.12
4036 5171 6.648725 ATTTCAGAAGTAAAACGATCCTCG 57.351 37.500 0.00 0.00 46.93 4.63
4048 5183 7.665559 AGCAATCTTACCACAATTTCAGAAGTA 59.334 33.333 0.00 0.00 0.00 2.24
4049 5184 6.491403 AGCAATCTTACCACAATTTCAGAAGT 59.509 34.615 0.00 0.00 0.00 3.01
4050 5185 6.917533 AGCAATCTTACCACAATTTCAGAAG 58.082 36.000 0.00 0.00 0.00 2.85
4051 5186 6.899393 AGCAATCTTACCACAATTTCAGAA 57.101 33.333 0.00 0.00 0.00 3.02
4052 5187 6.899393 AAGCAATCTTACCACAATTTCAGA 57.101 33.333 0.00 0.00 0.00 3.27
4053 5188 7.951530 AAAAGCAATCTTACCACAATTTCAG 57.048 32.000 0.00 0.00 31.02 3.02
4086 5235 0.690192 TAGGCACAGTGCTTTGGCTA 59.310 50.000 24.75 13.94 46.13 3.93
4112 5261 7.066887 ACAAGTCAAAATGCATAATATCGGTCA 59.933 33.333 0.00 0.00 0.00 4.02
4117 5266 9.793252 AGAACACAAGTCAAAATGCATAATATC 57.207 29.630 0.00 0.00 0.00 1.63
4139 5288 3.305335 CCCATACAAGGTGTTGCAAGAAC 60.305 47.826 2.82 2.82 37.14 3.01
4144 5293 2.666272 TTCCCATACAAGGTGTTGCA 57.334 45.000 0.00 0.00 37.14 4.08
4150 5299 4.160252 GCATGTTTCATTCCCATACAAGGT 59.840 41.667 0.00 0.00 0.00 3.50
4159 5308 1.401905 GACCGAGCATGTTTCATTCCC 59.598 52.381 0.00 0.00 0.00 3.97
4206 5355 5.163290 TGGTAAACTAGTGACAATGGTGTGA 60.163 40.000 0.00 0.00 38.41 3.58
4207 5356 5.060506 TGGTAAACTAGTGACAATGGTGTG 58.939 41.667 0.00 0.00 38.41 3.82
4208 5357 5.298989 TGGTAAACTAGTGACAATGGTGT 57.701 39.130 0.00 0.00 42.10 4.16
4215 5364 8.867097 GGATTAGGATATGGTAAACTAGTGACA 58.133 37.037 0.00 0.00 0.00 3.58
4216 5365 8.312564 GGGATTAGGATATGGTAAACTAGTGAC 58.687 40.741 0.00 0.00 0.00 3.67
4218 5367 8.202461 TGGGATTAGGATATGGTAAACTAGTG 57.798 38.462 0.00 0.00 0.00 2.74
4219 5368 8.826765 CATGGGATTAGGATATGGTAAACTAGT 58.173 37.037 0.00 0.00 0.00 2.57
4220 5369 8.826765 ACATGGGATTAGGATATGGTAAACTAG 58.173 37.037 0.00 0.00 0.00 2.57
4221 5370 8.751215 ACATGGGATTAGGATATGGTAAACTA 57.249 34.615 0.00 0.00 0.00 2.24
4222 5371 7.648177 ACATGGGATTAGGATATGGTAAACT 57.352 36.000 0.00 0.00 0.00 2.66
4223 5372 7.827729 GGTACATGGGATTAGGATATGGTAAAC 59.172 40.741 0.00 0.00 0.00 2.01
4226 5375 5.968167 GGGTACATGGGATTAGGATATGGTA 59.032 44.000 0.00 0.00 0.00 3.25
4227 5376 4.788617 GGGTACATGGGATTAGGATATGGT 59.211 45.833 0.00 0.00 0.00 3.55
4281 5430 4.806247 GTGTGGGAGATCTCATTTTCTACG 59.194 45.833 23.85 0.00 0.00 3.51
4361 5511 3.848554 GCAGTGGTTTCTTTACGTGCTTC 60.849 47.826 0.00 0.00 0.00 3.86
4414 5564 2.019249 TGCTGCTACATGCCATCTTTC 58.981 47.619 0.00 0.00 42.00 2.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.