Multiple sequence alignment - TraesCS6D01G134900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G134900 chr6D 100.000 4650 0 0 2267 6916 102854924 102850275 0.000000e+00 8588.0
1 TraesCS6D01G134900 chr6D 100.000 1881 0 0 1 1881 102857190 102855310 0.000000e+00 3474.0
2 TraesCS6D01G134900 chr6A 91.048 2167 92 45 2267 4370 123968655 123966528 0.000000e+00 2833.0
3 TraesCS6D01G134900 chr6A 89.139 1869 87 43 49 1881 123970597 123968809 0.000000e+00 2220.0
4 TraesCS6D01G134900 chr6A 91.564 1138 63 15 5272 6394 123965102 123963983 0.000000e+00 1539.0
5 TraesCS6D01G134900 chr6A 91.793 463 30 4 6456 6916 123958741 123958285 7.570000e-179 638.0
6 TraesCS6D01G134900 chr6A 91.139 395 29 5 4838 5228 123965853 123965461 1.320000e-146 531.0
7 TraesCS6D01G134900 chr6A 87.786 131 15 1 4495 4625 123966322 123966193 1.200000e-32 152.0
8 TraesCS6D01G134900 chr6B 91.159 1855 94 30 48 1881 188496457 188494652 0.000000e+00 2453.0
9 TraesCS6D01G134900 chr6B 90.859 1816 107 21 4838 6640 188491528 188489759 0.000000e+00 2379.0
10 TraesCS6D01G134900 chr6B 92.713 1537 52 18 2858 4348 188493895 188492373 0.000000e+00 2163.0
11 TraesCS6D01G134900 chr6B 92.257 607 28 8 2267 2872 188494502 188493914 0.000000e+00 843.0
12 TraesCS6D01G134900 chr6B 94.798 173 5 1 4441 4609 188492174 188492002 4.110000e-67 267.0
13 TraesCS6D01G134900 chr6B 91.534 189 6 6 6664 6851 188474071 188473892 1.150000e-62 252.0
14 TraesCS6D01G134900 chr6B 92.617 149 11 0 4601 4749 188491957 188491809 1.510000e-51 215.0
15 TraesCS6D01G134900 chr2D 89.623 318 22 5 1040 1356 423122349 423122042 1.810000e-105 394.0
16 TraesCS6D01G134900 chr5D 87.870 338 27 9 1051 1387 524590471 524590795 1.090000e-102 385.0
17 TraesCS6D01G134900 chr5D 86.809 235 20 5 1138 1372 436205422 436205199 1.150000e-62 252.0
18 TraesCS6D01G134900 chr3D 88.679 318 24 8 1051 1367 47169545 47169851 1.820000e-100 377.0
19 TraesCS6D01G134900 chr1D 88.073 218 16 5 1155 1372 326203557 326203764 4.140000e-62 250.0
20 TraesCS6D01G134900 chr1D 96.639 119 3 1 1041 1159 326194702 326194819 5.470000e-46 196.0
21 TraesCS6D01G134900 chr7A 75.415 301 38 20 1042 1330 699158850 699158574 5.670000e-21 113.0
22 TraesCS6D01G134900 chr7A 75.000 296 38 20 1047 1330 699145963 699146234 3.410000e-18 104.0
23 TraesCS6D01G134900 chr5B 100.000 28 0 0 1794 1821 77703400 77703373 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G134900 chr6D 102850275 102857190 6915 True 6031.000000 8588 100.0000 1 6916 2 chr6D.!!$R1 6915
1 TraesCS6D01G134900 chr6A 123963983 123970597 6614 True 1455.000000 2833 90.1352 49 6394 5 chr6A.!!$R2 6345
2 TraesCS6D01G134900 chr6B 188489759 188496457 6698 True 1386.666667 2453 92.4005 48 6640 6 chr6B.!!$R2 6592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
252 255 0.392729 CTCCAGAAGCAAGCTCCCAG 60.393 60.0 0.0 0.0 0.00 4.45 F
320 325 0.595095 GCGCTTTCCATCCATCCATC 59.405 55.0 0.0 0.0 0.00 3.51 F
1419 1453 0.178981 CCATCCATCCACCCATCCAC 60.179 60.0 0.0 0.0 0.00 4.02 F
2306 2364 0.107165 GGCATTAAAGCGAGGGTCCT 60.107 55.0 0.0 0.0 34.64 3.85 F
2657 2742 0.249868 TTCGTGGATGGATGCCGATC 60.250 55.0 0.0 0.0 0.00 3.69 F
3913 4083 0.179089 AGCTCGCTACAGCCAGATTG 60.179 55.0 0.0 0.0 40.65 2.67 F
5254 5906 0.396435 ACCTTGCGTGGTGATCTTGA 59.604 50.0 0.0 0.0 39.17 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1399 0.385223 CCTTCGTCGTCGTCTTCGTT 60.385 55.0 1.33 0.0 38.33 3.85 R
1688 1737 1.131638 CGAGAGGGGATTGGAATGGA 58.868 55.0 0.00 0.0 0.00 3.41 R
3083 3217 0.539438 GATGGAACCACAGGCCACAA 60.539 55.0 5.01 0.0 33.93 3.33 R
3888 4058 0.592754 GGCTGTAGCGAGCTTAGACG 60.593 60.0 1.86 0.0 43.26 4.18 R
4278 4452 0.971386 AACACCCTGTACACCCTACG 59.029 55.0 0.00 0.0 0.00 3.51 R
5286 6253 0.476338 ACCTACCACACATGCCACAA 59.524 50.0 0.00 0.0 0.00 3.33 R
6767 7751 0.032130 TATTCCGCACGCATCCTCTC 59.968 55.0 0.00 0.0 0.00 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 6.773976 TGTTCTTCACACTGGAATTTCTTT 57.226 33.333 0.00 0.00 0.00 2.52
32 33 7.169158 TGTTCTTCACACTGGAATTTCTTTT 57.831 32.000 0.00 0.00 0.00 2.27
33 34 7.035004 TGTTCTTCACACTGGAATTTCTTTTG 58.965 34.615 0.00 0.00 0.00 2.44
34 35 6.773976 TCTTCACACTGGAATTTCTTTTGT 57.226 33.333 0.00 0.00 0.00 2.83
35 36 7.169158 TCTTCACACTGGAATTTCTTTTGTT 57.831 32.000 0.00 0.00 0.00 2.83
36 37 7.610865 TCTTCACACTGGAATTTCTTTTGTTT 58.389 30.769 0.00 0.00 0.00 2.83
37 38 8.744652 TCTTCACACTGGAATTTCTTTTGTTTA 58.255 29.630 0.00 0.00 0.00 2.01
38 39 9.533253 CTTCACACTGGAATTTCTTTTGTTTAT 57.467 29.630 0.00 0.00 0.00 1.40
39 40 9.883142 TTCACACTGGAATTTCTTTTGTTTATT 57.117 25.926 0.00 0.00 0.00 1.40
95 96 1.118965 TGGTGTCAGCGGAAGGAAGA 61.119 55.000 0.00 0.00 0.00 2.87
120 121 1.831652 AAGAGGCTTCCACCGGTGAG 61.832 60.000 36.07 25.69 33.69 3.51
143 144 3.741476 CTGTTTGCCTGCCCGCTC 61.741 66.667 0.00 0.00 0.00 5.03
252 255 0.392729 CTCCAGAAGCAAGCTCCCAG 60.393 60.000 0.00 0.00 0.00 4.45
255 258 1.003580 CCAGAAGCAAGCTCCCAGTTA 59.996 52.381 0.00 0.00 0.00 2.24
258 261 3.376546 CAGAAGCAAGCTCCCAGTTATTC 59.623 47.826 0.00 0.00 0.00 1.75
259 262 3.265479 AGAAGCAAGCTCCCAGTTATTCT 59.735 43.478 0.00 0.00 0.00 2.40
261 264 4.844349 AGCAAGCTCCCAGTTATTCTTA 57.156 40.909 0.00 0.00 0.00 2.10
262 265 5.179452 AGCAAGCTCCCAGTTATTCTTAA 57.821 39.130 0.00 0.00 0.00 1.85
317 322 1.152881 AGGCGCTTTCCATCCATCC 60.153 57.895 7.64 0.00 0.00 3.51
318 323 1.453745 GGCGCTTTCCATCCATCCA 60.454 57.895 7.64 0.00 0.00 3.41
319 324 0.825010 GGCGCTTTCCATCCATCCAT 60.825 55.000 7.64 0.00 0.00 3.41
320 325 0.595095 GCGCTTTCCATCCATCCATC 59.405 55.000 0.00 0.00 0.00 3.51
321 326 1.971481 CGCTTTCCATCCATCCATCA 58.029 50.000 0.00 0.00 0.00 3.07
336 341 1.000827 CCATCATCCTTCTCCTCGTCG 60.001 57.143 0.00 0.00 0.00 5.12
478 485 3.050275 GCTTGGGTCACTGACGGC 61.050 66.667 3.04 2.06 32.65 5.68
632 639 4.309950 GACGCGTGGGTCCAGGTT 62.310 66.667 20.70 0.00 34.67 3.50
633 640 4.309950 ACGCGTGGGTCCAGGTTC 62.310 66.667 12.93 0.00 34.67 3.62
722 730 2.005995 CGAGGTGTGTGTGTGTGTG 58.994 57.895 0.00 0.00 0.00 3.82
906 925 2.018086 CCCTCCTCCTCCTCCCTCT 61.018 68.421 0.00 0.00 0.00 3.69
907 926 1.541672 CCTCCTCCTCCTCCCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
908 927 1.541672 CTCCTCCTCCTCCCTCTCC 59.458 68.421 0.00 0.00 0.00 3.71
909 928 1.230650 TCCTCCTCCTCCCTCTCCA 60.231 63.158 0.00 0.00 0.00 3.86
973 997 0.732538 GGCCGGCGTGATTTTCTTTG 60.733 55.000 22.54 0.00 0.00 2.77
975 999 1.963747 CCGGCGTGATTTTCTTTGTC 58.036 50.000 6.01 0.00 0.00 3.18
1224 1255 4.078516 GGTAAGGCGGCGAGGTGT 62.079 66.667 12.98 0.00 0.00 4.16
1419 1453 0.178981 CCATCCATCCACCCATCCAC 60.179 60.000 0.00 0.00 0.00 4.02
1520 1554 3.818210 CTCTCTCCTATCTCTGCGCTTTA 59.182 47.826 9.73 0.00 0.00 1.85
1671 1720 1.068281 CCACCGTCTCCATCTCATCTG 59.932 57.143 0.00 0.00 0.00 2.90
1688 1737 4.165565 TCATCTGCTCCTCCTCATTTCATT 59.834 41.667 0.00 0.00 0.00 2.57
1694 1743 4.277921 GCTCCTCCTCATTTCATTCCATTC 59.722 45.833 0.00 0.00 0.00 2.67
1746 1795 1.153249 GGGATCCGCATTGGTTCGA 60.153 57.895 5.45 0.00 37.33 3.71
1747 1796 0.535102 GGGATCCGCATTGGTTCGAT 60.535 55.000 5.45 0.00 37.33 3.59
1752 1801 1.202486 TCCGCATTGGTTCGATCCTAC 60.202 52.381 13.55 0.00 39.52 3.18
1753 1802 1.202533 CCGCATTGGTTCGATCCTACT 60.203 52.381 13.55 0.00 0.00 2.57
1756 1805 3.243434 CGCATTGGTTCGATCCTACTACT 60.243 47.826 13.55 0.00 0.00 2.57
1780 1832 2.420269 GGTTCTTCCTCCTCCCGAATTC 60.420 54.545 0.00 0.00 0.00 2.17
1809 1861 1.866601 GTTGCAAAACCATTGCCAGTC 59.133 47.619 0.00 0.00 44.32 3.51
1854 1911 5.051891 AGAACCGAAATTCAGCATCTTTG 57.948 39.130 0.00 0.00 0.00 2.77
2303 2361 1.076995 GGGGCATTAAAGCGAGGGT 60.077 57.895 0.00 0.00 34.64 4.34
2304 2362 1.101635 GGGGCATTAAAGCGAGGGTC 61.102 60.000 0.00 0.00 34.64 4.46
2305 2363 1.101635 GGGCATTAAAGCGAGGGTCC 61.102 60.000 0.00 0.00 34.64 4.46
2306 2364 0.107165 GGCATTAAAGCGAGGGTCCT 60.107 55.000 0.00 0.00 34.64 3.85
2307 2365 1.300481 GCATTAAAGCGAGGGTCCTC 58.700 55.000 6.94 6.94 39.55 3.71
2308 2366 1.406887 GCATTAAAGCGAGGGTCCTCA 60.407 52.381 16.31 0.00 42.86 3.86
2309 2367 2.746472 GCATTAAAGCGAGGGTCCTCAT 60.746 50.000 16.31 2.33 42.86 2.90
2310 2368 2.691409 TTAAAGCGAGGGTCCTCATG 57.309 50.000 16.31 3.16 42.86 3.07
2311 2369 1.860641 TAAAGCGAGGGTCCTCATGA 58.139 50.000 16.31 0.00 42.86 3.07
2312 2370 0.539051 AAAGCGAGGGTCCTCATGAG 59.461 55.000 16.24 16.24 42.86 2.90
2590 2666 1.070105 CCGTCGGGTGGTTTTCTCA 59.930 57.895 2.34 0.00 0.00 3.27
2602 2678 4.507756 GTGGTTTTCTCATGTTTGCCTTTC 59.492 41.667 0.00 0.00 0.00 2.62
2657 2742 0.249868 TTCGTGGATGGATGCCGATC 60.250 55.000 0.00 0.00 0.00 3.69
2799 2884 4.984205 GATACGGTCGAAGAAGAAGAAGT 58.016 43.478 0.00 0.00 39.69 3.01
2800 2885 3.014604 ACGGTCGAAGAAGAAGAAGTG 57.985 47.619 0.00 0.00 39.69 3.16
2802 2887 2.981140 CGGTCGAAGAAGAAGAAGTGAC 59.019 50.000 0.00 0.00 39.69 3.67
2803 2888 3.318886 GGTCGAAGAAGAAGAAGTGACC 58.681 50.000 0.00 0.00 39.69 4.02
2804 2889 2.981140 GTCGAAGAAGAAGAAGTGACCG 59.019 50.000 0.00 0.00 39.69 4.79
2806 2894 3.817084 TCGAAGAAGAAGAAGTGACCGTA 59.183 43.478 0.00 0.00 0.00 4.02
2840 2928 3.469008 TTTCTGTGATGGTTCGTCACT 57.531 42.857 17.62 0.00 46.80 3.41
2841 2929 2.724977 TCTGTGATGGTTCGTCACTC 57.275 50.000 17.62 0.00 46.80 3.51
2894 3014 2.504519 GCGAGCCGGGGTATTTCT 59.495 61.111 2.18 0.00 0.00 2.52
2922 3042 3.358111 TTTGGAACGGGAGCAATATCA 57.642 42.857 0.00 0.00 0.00 2.15
3081 3215 3.241530 TGTTGGGTCGAGGCAGCT 61.242 61.111 0.00 0.00 0.00 4.24
3082 3216 2.743928 GTTGGGTCGAGGCAGCTG 60.744 66.667 10.11 10.11 0.00 4.24
3083 3217 3.241530 TTGGGTCGAGGCAGCTGT 61.242 61.111 16.64 0.00 0.00 4.40
3188 3323 2.608988 CCCTCTCTGCAGGTGGGT 60.609 66.667 23.63 0.00 32.36 4.51
3195 3330 1.133181 TCTGCAGGTGGGTTCCATCA 61.133 55.000 15.13 0.00 37.04 3.07
3284 3419 5.178096 TGGTGAGCTCCTTCATCAAATAA 57.822 39.130 12.15 0.00 35.36 1.40
3285 3420 4.943705 TGGTGAGCTCCTTCATCAAATAAC 59.056 41.667 12.15 0.00 35.36 1.89
3286 3421 4.943705 GGTGAGCTCCTTCATCAAATAACA 59.056 41.667 12.15 0.00 0.00 2.41
3288 3423 6.096001 GGTGAGCTCCTTCATCAAATAACAAT 59.904 38.462 12.15 0.00 0.00 2.71
3289 3424 7.363268 GGTGAGCTCCTTCATCAAATAACAATT 60.363 37.037 12.15 0.00 0.00 2.32
3291 3426 8.896744 TGAGCTCCTTCATCAAATAACAATTAG 58.103 33.333 12.15 0.00 0.00 1.73
3292 3427 8.230472 AGCTCCTTCATCAAATAACAATTAGG 57.770 34.615 0.00 0.00 0.00 2.69
3293 3428 7.286316 AGCTCCTTCATCAAATAACAATTAGGG 59.714 37.037 0.00 0.00 0.00 3.53
3304 3448 8.679100 CAAATAACAATTAGGGAATTACGTGGA 58.321 33.333 0.00 0.00 33.33 4.02
3308 3452 7.153217 ACAATTAGGGAATTACGTGGAAAAG 57.847 36.000 0.00 0.00 33.33 2.27
3315 3459 6.536224 AGGGAATTACGTGGAAAAGTATTACG 59.464 38.462 0.00 0.00 40.30 3.18
3414 3579 1.927608 GCTCGGCAAAAAGAGAGGGC 61.928 60.000 0.00 0.00 36.65 5.19
3462 3628 0.601558 GCCACTAGTCGTCACAAGGA 59.398 55.000 0.00 0.00 0.00 3.36
3638 3807 2.096417 GCCACAAAAGCTGTACGTACTG 60.096 50.000 25.12 24.37 36.10 2.74
3666 3835 1.004044 AGACCTGCTTCATCACCAAGG 59.996 52.381 0.00 0.00 0.00 3.61
3667 3836 0.610232 ACCTGCTTCATCACCAAGGC 60.610 55.000 0.00 0.00 0.00 4.35
3776 3945 1.436195 GATTGGTTGCTGCCGCGATA 61.436 55.000 8.23 0.00 39.65 2.92
3862 4031 6.281405 ACACGAGGTGATGATAAGATTTACC 58.719 40.000 2.29 0.00 36.96 2.85
3913 4083 0.179089 AGCTCGCTACAGCCAGATTG 60.179 55.000 0.00 0.00 40.65 2.67
4266 4440 4.141459 GCTTTAGTTTGTAGGCTATCCCCT 60.141 45.833 0.00 0.00 39.05 4.79
4278 4452 2.026729 GCTATCCCCTCCTAAAGATGCC 60.027 54.545 0.00 0.00 0.00 4.40
4344 4525 9.649167 TTTTTGAAATTTCATTTGCCATTTTGT 57.351 22.222 21.10 0.00 37.00 2.83
4354 4535 5.462034 TTTGCCATTTTGTTTCAGAAACG 57.538 34.783 19.08 6.74 44.28 3.60
4360 4563 5.402270 CCATTTTGTTTCAGAAACGGATCAC 59.598 40.000 19.08 0.00 44.28 3.06
4388 4610 8.695456 AGGCTAATGGGATTTTTACATTGTTAG 58.305 33.333 0.00 0.00 36.36 2.34
4398 4620 7.989416 TTTTTACATTGTTAGTAGGTGGAGG 57.011 36.000 0.00 0.00 0.00 4.30
4439 4687 8.747538 ATGAAAAACTTTTGGTACTAGACTGT 57.252 30.769 0.00 0.00 0.00 3.55
4535 4844 4.555511 GCGCTATCATTTTCATTCACTCCC 60.556 45.833 0.00 0.00 0.00 4.30
4579 4888 2.135933 CACGTCCTGGTCTTTTCACTC 58.864 52.381 0.00 0.00 0.00 3.51
4626 4992 4.948621 GTCCAGTCCTTGCTAGTAGAAGTA 59.051 45.833 0.00 0.00 0.00 2.24
4639 5005 6.699642 GCTAGTAGAAGTAGATGCCTTCTTTG 59.300 42.308 7.86 0.00 44.78 2.77
4641 5007 5.721960 AGTAGAAGTAGATGCCTTCTTTGGA 59.278 40.000 7.86 0.00 44.78 3.53
4650 5016 9.998106 GTAGATGCCTTCTTTGGACTATTAATA 57.002 33.333 0.00 0.00 35.79 0.98
4656 5022 7.386848 GCCTTCTTTGGACTATTAATACGCATA 59.613 37.037 0.00 0.00 0.00 3.14
4705 5071 8.995220 TCAAATTGTTAGCGACTAACTTTACAT 58.005 29.630 21.86 9.88 44.49 2.29
4711 5077 8.298854 TGTTAGCGACTAACTTTACATGACTTA 58.701 33.333 21.86 3.81 44.49 2.24
4735 5101 4.810790 CTGTAAGTCATCTCAAAGTCGGT 58.189 43.478 0.00 0.00 0.00 4.69
4749 5115 0.532573 GTCGGTGCTGATCTTGAGGA 59.467 55.000 0.00 0.00 0.00 3.71
4750 5116 1.066858 GTCGGTGCTGATCTTGAGGAA 60.067 52.381 0.00 0.00 0.00 3.36
4753 5119 3.012518 CGGTGCTGATCTTGAGGAATTT 58.987 45.455 0.00 0.00 0.00 1.82
4754 5120 4.081142 TCGGTGCTGATCTTGAGGAATTTA 60.081 41.667 0.00 0.00 0.00 1.40
4755 5121 4.818546 CGGTGCTGATCTTGAGGAATTTAT 59.181 41.667 0.00 0.00 0.00 1.40
4756 5122 5.049818 CGGTGCTGATCTTGAGGAATTTATC 60.050 44.000 0.00 0.00 0.00 1.75
4757 5123 6.060788 GGTGCTGATCTTGAGGAATTTATCT 58.939 40.000 0.00 0.00 0.00 1.98
4758 5124 6.545298 GGTGCTGATCTTGAGGAATTTATCTT 59.455 38.462 0.00 0.00 0.00 2.40
4759 5125 7.716998 GGTGCTGATCTTGAGGAATTTATCTTA 59.283 37.037 0.00 0.00 0.00 2.10
4760 5126 9.282569 GTGCTGATCTTGAGGAATTTATCTTAT 57.717 33.333 0.00 0.00 0.00 1.73
4761 5127 9.857656 TGCTGATCTTGAGGAATTTATCTTATT 57.142 29.630 0.00 0.00 0.00 1.40
4810 5176 6.318913 TGGATTAAAAATTCCCCAGAACAGA 58.681 36.000 0.00 0.00 33.97 3.41
4811 5177 6.784969 TGGATTAAAAATTCCCCAGAACAGAA 59.215 34.615 0.00 0.00 33.97 3.02
4814 5180 4.607293 AAAATTCCCCAGAACAGAAAGC 57.393 40.909 0.00 0.00 33.97 3.51
4829 5195 2.782925 AGAAAGCCCCCAAAACCAAATT 59.217 40.909 0.00 0.00 0.00 1.82
4849 5491 3.994204 TGGGAGTTTTCTAAAAACGGC 57.006 42.857 9.04 6.28 35.42 5.68
4860 5502 5.957842 TCTAAAAACGGCAATCATTCAGT 57.042 34.783 0.00 0.00 0.00 3.41
5076 5726 9.528018 TTTACAATAAGAGAAAACTGGCAAAAG 57.472 29.630 0.00 0.00 0.00 2.27
5085 5735 5.589855 AGAAAACTGGCAAAAGGAAAATTGG 59.410 36.000 0.00 0.00 0.00 3.16
5169 5819 2.030457 CCCTTTTCATGCGTATCGTCAC 59.970 50.000 0.00 0.00 0.00 3.67
5180 5830 3.673809 GCGTATCGTCACAAGTTCTCTTT 59.326 43.478 0.00 0.00 0.00 2.52
5234 5886 9.884465 GTGTATTTCATGCTGATTAATTCCTAC 57.116 33.333 0.00 0.00 0.00 3.18
5254 5906 0.396435 ACCTTGCGTGGTGATCTTGA 59.604 50.000 0.00 0.00 39.17 3.02
5259 5911 1.221840 CGTGGTGATCTTGAGGGGG 59.778 63.158 0.00 0.00 0.00 5.40
5285 6252 6.655003 GTCCAGTGACCATCTTATTTTCTCAA 59.345 38.462 0.00 0.00 35.34 3.02
5286 6253 7.337942 GTCCAGTGACCATCTTATTTTCTCAAT 59.662 37.037 0.00 0.00 35.34 2.57
5312 6279 0.690762 ATGTGTGGTAGGTGTGGTCC 59.309 55.000 0.00 0.00 0.00 4.46
5485 6455 3.411446 CTGTGGTTTATCCTTGTGCTGA 58.589 45.455 0.00 0.00 37.07 4.26
5503 6473 6.537660 TGTGCTGATCTTGTAGATTTGAGATG 59.462 38.462 0.00 0.00 34.53 2.90
5583 6553 9.671279 CCCAATTTCCTTTGCTATTTTATTCTT 57.329 29.630 0.00 0.00 0.00 2.52
5609 6579 5.617187 CGTCGCTGTTTATGAATTCTTATGC 59.383 40.000 7.05 6.56 0.00 3.14
5667 6641 3.528905 ACATGATTTCTCCCCTTCCATCA 59.471 43.478 0.00 0.00 0.00 3.07
5926 6904 0.392193 CCTTGTTGAGCGCTCCAGAT 60.392 55.000 33.23 0.00 0.00 2.90
5928 6906 0.737367 TTGTTGAGCGCTCCAGATCG 60.737 55.000 33.23 0.00 0.00 3.69
6036 7015 3.928375 CCATCCAAAGAAAAAGAATGGCG 59.072 43.478 0.00 0.00 0.00 5.69
6116 7100 3.314541 AGGTCAGGTTGTAGCTAAACG 57.685 47.619 0.00 0.00 0.00 3.60
6117 7101 2.028385 AGGTCAGGTTGTAGCTAAACGG 60.028 50.000 0.00 0.00 0.00 4.44
6189 7173 8.187913 AGTGCTTCTATATTTCATAGAGCTGA 57.812 34.615 0.00 0.00 32.81 4.26
6190 7174 8.306038 AGTGCTTCTATATTTCATAGAGCTGAG 58.694 37.037 0.00 3.52 32.81 3.35
6191 7175 8.303156 GTGCTTCTATATTTCATAGAGCTGAGA 58.697 37.037 0.00 0.00 32.81 3.27
6212 7196 1.891919 TGGCACAGCTCAAACCGAC 60.892 57.895 0.00 0.00 0.00 4.79
6274 7258 8.453320 TGTTGCTTTGTTATAAGTGATGATGAG 58.547 33.333 0.00 0.00 0.00 2.90
6282 7266 8.615211 TGTTATAAGTGATGATGAGAATGTTGC 58.385 33.333 0.00 0.00 0.00 4.17
6297 7281 3.368822 TGCCTGTGCAGATTTGGC 58.631 55.556 5.72 5.72 44.23 4.52
6316 7300 7.624360 TTTGGCTACTGTATGAAGTAATTGG 57.376 36.000 0.00 0.00 32.35 3.16
6327 7311 9.005777 TGTATGAAGTAATTGGTAACTTGTTCC 57.994 33.333 0.00 0.00 36.10 3.62
6337 7321 7.654022 TTGGTAACTTGTTCCATCTTTCTTT 57.346 32.000 5.84 0.00 37.61 2.52
6338 7322 7.654022 TGGTAACTTGTTCCATCTTTCTTTT 57.346 32.000 0.00 0.00 37.61 2.27
6370 7354 1.795170 GAATGGCCTTGCGTGTGTGT 61.795 55.000 3.32 0.00 0.00 3.72
6382 7366 1.674359 GTGTGTGTCATGGGTGAACA 58.326 50.000 0.00 0.00 35.80 3.18
6409 7393 7.040062 TGGTTGTTGTAATACCAAATCAGGAAG 60.040 37.037 0.00 0.00 38.92 3.46
6411 7395 9.005777 GTTGTTGTAATACCAAATCAGGAAGTA 57.994 33.333 0.00 0.00 0.00 2.24
6415 7399 9.880157 TTGTAATACCAAATCAGGAAGTACTAC 57.120 33.333 0.00 0.00 0.00 2.73
6416 7400 8.192774 TGTAATACCAAATCAGGAAGTACTACG 58.807 37.037 0.00 0.00 0.00 3.51
6417 7401 4.467198 ACCAAATCAGGAAGTACTACGG 57.533 45.455 0.00 0.00 0.00 4.02
6426 7410 5.537674 TCAGGAAGTACTACGGAGTTTTTCT 59.462 40.000 5.12 2.33 37.78 2.52
6430 7414 8.033626 AGGAAGTACTACGGAGTTTTTCTATTG 58.966 37.037 5.12 0.00 37.78 1.90
6431 7415 8.031277 GGAAGTACTACGGAGTTTTTCTATTGA 58.969 37.037 5.12 0.00 37.78 2.57
6436 7420 7.527457 ACTACGGAGTTTTTCTATTGAAATGC 58.473 34.615 0.00 0.63 37.78 3.56
6439 7423 4.562789 GGAGTTTTTCTATTGAAATGCGGC 59.437 41.667 3.15 0.00 41.24 6.53
6440 7424 4.165779 AGTTTTTCTATTGAAATGCGGCG 58.834 39.130 0.51 0.51 41.24 6.46
6441 7425 4.083003 AGTTTTTCTATTGAAATGCGGCGA 60.083 37.500 12.98 0.00 41.24 5.54
6447 7431 2.261037 TTGAAATGCGGCGATTTCTG 57.739 45.000 28.02 0.00 41.21 3.02
6449 7433 1.196130 GAAATGCGGCGATTTCTGCG 61.196 55.000 24.39 0.00 41.12 5.18
6478 7462 1.630244 CCACGCTGAGCACTGCTAAC 61.630 60.000 4.88 0.00 39.88 2.34
6480 7464 2.447887 CGCTGAGCACTGCTAACCG 61.448 63.158 4.88 3.08 39.88 4.44
6481 7465 2.103042 GCTGAGCACTGCTAACCGG 61.103 63.158 2.71 0.00 39.88 5.28
6488 7472 1.076533 CACTGCTAACCGGTACAGCG 61.077 60.000 27.02 23.60 38.15 5.18
6491 7475 2.574929 CTAACCGGTACAGCGGCA 59.425 61.111 19.08 7.12 0.00 5.69
6492 7476 1.518572 CTAACCGGTACAGCGGCAG 60.519 63.158 19.08 12.64 0.00 4.85
6497 7481 2.094659 CGGTACAGCGGCAGAACAG 61.095 63.158 1.45 0.00 0.00 3.16
6503 7487 1.744368 AGCGGCAGAACAGATGCAG 60.744 57.895 1.45 0.00 45.68 4.41
6504 7488 2.789917 CGGCAGAACAGATGCAGC 59.210 61.111 0.00 0.00 45.68 5.25
6579 7563 6.291377 GCATTGATACTATCCCTTGTCAAGA 58.709 40.000 14.42 0.00 0.00 3.02
6584 7568 4.559862 ACTATCCCTTGTCAAGACTTGG 57.440 45.455 14.42 6.70 0.00 3.61
6595 7579 4.889409 TGTCAAGACTTGGCATCTTTCTTT 59.111 37.500 18.39 0.00 40.96 2.52
6596 7580 5.218139 GTCAAGACTTGGCATCTTTCTTTG 58.782 41.667 14.92 0.00 34.08 2.77
6610 7594 7.576287 GCATCTTTCTTTGTCAGATCAATGGAA 60.576 37.037 0.00 0.00 0.00 3.53
6612 7596 7.651808 TCTTTCTTTGTCAGATCAATGGAAAC 58.348 34.615 0.00 0.00 32.32 2.78
6613 7597 7.503566 TCTTTCTTTGTCAGATCAATGGAAACT 59.496 33.333 0.00 0.00 32.32 2.66
6620 7604 7.819644 TGTCAGATCAATGGAAACTTGTAATG 58.180 34.615 0.00 0.00 0.00 1.90
6622 7606 6.038356 CAGATCAATGGAAACTTGTAATGCC 58.962 40.000 0.00 0.00 0.00 4.40
6628 7612 3.245087 TGGAAACTTGTAATGCCCTGCTA 60.245 43.478 0.00 0.00 0.00 3.49
6632 7616 4.034285 ACTTGTAATGCCCTGCTAAACT 57.966 40.909 0.00 0.00 0.00 2.66
6636 7620 3.756434 TGTAATGCCCTGCTAAACTGAAC 59.244 43.478 0.00 0.00 0.00 3.18
6640 7624 1.950954 GCCCTGCTAAACTGAACCCTC 60.951 57.143 0.00 0.00 0.00 4.30
6641 7625 1.676014 CCCTGCTAAACTGAACCCTCG 60.676 57.143 0.00 0.00 0.00 4.63
6642 7626 1.275291 CCTGCTAAACTGAACCCTCGA 59.725 52.381 0.00 0.00 0.00 4.04
6643 7627 2.611518 CTGCTAAACTGAACCCTCGAG 58.388 52.381 5.13 5.13 0.00 4.04
6644 7628 1.337823 TGCTAAACTGAACCCTCGAGC 60.338 52.381 6.99 0.00 0.00 5.03
6645 7629 1.630148 CTAAACTGAACCCTCGAGCG 58.370 55.000 6.99 0.00 0.00 5.03
6646 7630 1.201647 CTAAACTGAACCCTCGAGCGA 59.798 52.381 6.99 0.00 0.00 4.93
6647 7631 0.038159 AAACTGAACCCTCGAGCGAG 60.038 55.000 6.99 12.66 41.63 5.03
6648 7632 0.894184 AACTGAACCCTCGAGCGAGA 60.894 55.000 20.41 0.10 44.53 4.04
6649 7633 1.309499 ACTGAACCCTCGAGCGAGAG 61.309 60.000 20.41 10.57 44.53 3.20
6663 7647 1.205568 GAGAGCCTCGTCGATAGCG 59.794 63.158 10.65 0.00 39.35 4.26
6664 7648 1.222766 GAGAGCCTCGTCGATAGCGA 61.223 60.000 0.00 0.00 45.71 4.93
6672 7656 3.908189 TCGATAGCGACCCACGAA 58.092 55.556 0.00 0.00 45.77 3.85
6673 7657 1.725665 TCGATAGCGACCCACGAAG 59.274 57.895 0.00 0.00 45.77 3.79
6674 7658 1.028330 TCGATAGCGACCCACGAAGT 61.028 55.000 0.00 0.00 42.27 3.01
6675 7659 0.659427 CGATAGCGACCCACGAAGTA 59.341 55.000 0.00 0.00 45.77 2.24
6676 7660 1.266175 CGATAGCGACCCACGAAGTAT 59.734 52.381 0.00 0.00 45.77 2.12
6677 7661 2.664971 CGATAGCGACCCACGAAGTATC 60.665 54.545 0.00 0.00 45.77 2.24
6686 7670 3.601981 CGAAGTATCGGCTCGTGC 58.398 61.111 0.00 0.00 45.32 5.34
6702 7686 3.276846 GCCGGCGGCGTAATTCAT 61.277 61.111 37.09 0.00 39.62 2.57
6703 7687 2.935955 CCGGCGGCGTAATTCATC 59.064 61.111 30.09 0.00 0.00 2.92
6704 7688 2.604174 CCGGCGGCGTAATTCATCC 61.604 63.158 30.09 0.00 0.00 3.51
6705 7689 2.935955 GGCGGCGTAATTCATCCG 59.064 61.111 9.37 7.55 44.29 4.18
6706 7690 1.593209 GGCGGCGTAATTCATCCGA 60.593 57.895 9.37 0.00 44.23 4.55
6707 7691 1.563173 GCGGCGTAATTCATCCGAC 59.437 57.895 9.37 0.53 44.23 4.79
6708 7692 1.149361 GCGGCGTAATTCATCCGACA 61.149 55.000 9.37 0.00 44.23 4.35
6709 7693 0.852777 CGGCGTAATTCATCCGACAG 59.147 55.000 0.00 0.00 44.23 3.51
6710 7694 1.801395 CGGCGTAATTCATCCGACAGT 60.801 52.381 0.00 0.00 44.23 3.55
6711 7695 2.277084 GGCGTAATTCATCCGACAGTT 58.723 47.619 0.00 0.00 0.00 3.16
6712 7696 2.030457 GGCGTAATTCATCCGACAGTTG 59.970 50.000 0.00 0.00 0.00 3.16
6713 7697 2.030457 GCGTAATTCATCCGACAGTTGG 59.970 50.000 0.00 0.00 0.00 3.77
6714 7698 2.607635 CGTAATTCATCCGACAGTTGGG 59.392 50.000 7.02 0.00 0.00 4.12
6715 7699 3.677700 CGTAATTCATCCGACAGTTGGGA 60.678 47.826 7.02 1.81 36.61 4.37
6716 7700 3.433306 AATTCATCCGACAGTTGGGAA 57.567 42.857 7.02 4.16 35.60 3.97
6717 7701 2.178912 TTCATCCGACAGTTGGGAAC 57.821 50.000 7.02 0.00 35.60 3.62
6730 7714 3.777556 GGAACCAGGGCAAGTTGG 58.222 61.111 4.75 0.00 40.38 3.77
6731 7715 1.152830 GGAACCAGGGCAAGTTGGA 59.847 57.895 4.75 0.00 37.89 3.53
6732 7716 0.469144 GGAACCAGGGCAAGTTGGAA 60.469 55.000 4.75 0.00 37.89 3.53
6733 7717 0.961753 GAACCAGGGCAAGTTGGAAG 59.038 55.000 4.75 0.00 37.89 3.46
6734 7718 0.469892 AACCAGGGCAAGTTGGAAGG 60.470 55.000 4.75 0.00 37.89 3.46
6735 7719 1.153756 CCAGGGCAAGTTGGAAGGT 59.846 57.895 4.75 0.00 36.55 3.50
6736 7720 1.181098 CCAGGGCAAGTTGGAAGGTG 61.181 60.000 4.75 0.00 36.55 4.00
6737 7721 0.468029 CAGGGCAAGTTGGAAGGTGT 60.468 55.000 4.75 0.00 0.00 4.16
6738 7722 1.145571 AGGGCAAGTTGGAAGGTGTA 58.854 50.000 4.75 0.00 0.00 2.90
6739 7723 1.073923 AGGGCAAGTTGGAAGGTGTAG 59.926 52.381 4.75 0.00 0.00 2.74
6740 7724 1.073284 GGGCAAGTTGGAAGGTGTAGA 59.927 52.381 4.75 0.00 0.00 2.59
6741 7725 2.290960 GGGCAAGTTGGAAGGTGTAGAT 60.291 50.000 4.75 0.00 0.00 1.98
6742 7726 3.054655 GGGCAAGTTGGAAGGTGTAGATA 60.055 47.826 4.75 0.00 0.00 1.98
6743 7727 4.192317 GGCAAGTTGGAAGGTGTAGATAG 58.808 47.826 4.75 0.00 0.00 2.08
6744 7728 4.081087 GGCAAGTTGGAAGGTGTAGATAGA 60.081 45.833 4.75 0.00 0.00 1.98
6745 7729 5.396884 GGCAAGTTGGAAGGTGTAGATAGAT 60.397 44.000 4.75 0.00 0.00 1.98
6746 7730 6.183360 GGCAAGTTGGAAGGTGTAGATAGATA 60.183 42.308 4.75 0.00 0.00 1.98
6747 7731 6.926272 GCAAGTTGGAAGGTGTAGATAGATAG 59.074 42.308 4.75 0.00 0.00 2.08
6748 7732 7.201920 GCAAGTTGGAAGGTGTAGATAGATAGA 60.202 40.741 4.75 0.00 0.00 1.98
6749 7733 8.356657 CAAGTTGGAAGGTGTAGATAGATAGAG 58.643 40.741 0.00 0.00 0.00 2.43
6750 7734 7.817440 AGTTGGAAGGTGTAGATAGATAGAGA 58.183 38.462 0.00 0.00 0.00 3.10
6751 7735 7.942341 AGTTGGAAGGTGTAGATAGATAGAGAG 59.058 40.741 0.00 0.00 0.00 3.20
6752 7736 6.242396 TGGAAGGTGTAGATAGATAGAGAGC 58.758 44.000 0.00 0.00 0.00 4.09
6753 7737 6.183361 TGGAAGGTGTAGATAGATAGAGAGCA 60.183 42.308 0.00 0.00 0.00 4.26
6754 7738 6.374333 GGAAGGTGTAGATAGATAGAGAGCAG 59.626 46.154 0.00 0.00 0.00 4.24
6755 7739 6.448369 AGGTGTAGATAGATAGAGAGCAGT 57.552 41.667 0.00 0.00 0.00 4.40
6756 7740 6.848069 AGGTGTAGATAGATAGAGAGCAGTT 58.152 40.000 0.00 0.00 0.00 3.16
6757 7741 6.714810 AGGTGTAGATAGATAGAGAGCAGTTG 59.285 42.308 0.00 0.00 0.00 3.16
6758 7742 6.072175 GGTGTAGATAGATAGAGAGCAGTTGG 60.072 46.154 0.00 0.00 0.00 3.77
6759 7743 6.712998 GTGTAGATAGATAGAGAGCAGTTGGA 59.287 42.308 0.00 0.00 0.00 3.53
6760 7744 6.939730 TGTAGATAGATAGAGAGCAGTTGGAG 59.060 42.308 0.00 0.00 0.00 3.86
6761 7745 5.324409 AGATAGATAGAGAGCAGTTGGAGG 58.676 45.833 0.00 0.00 0.00 4.30
6762 7746 3.678965 AGATAGAGAGCAGTTGGAGGA 57.321 47.619 0.00 0.00 0.00 3.71
6763 7747 4.197559 AGATAGAGAGCAGTTGGAGGAT 57.802 45.455 0.00 0.00 0.00 3.24
6764 7748 4.555689 AGATAGAGAGCAGTTGGAGGATT 58.444 43.478 0.00 0.00 0.00 3.01
6765 7749 4.344679 AGATAGAGAGCAGTTGGAGGATTG 59.655 45.833 0.00 0.00 0.00 2.67
6766 7750 2.264455 AGAGAGCAGTTGGAGGATTGT 58.736 47.619 0.00 0.00 0.00 2.71
6767 7751 2.027377 AGAGAGCAGTTGGAGGATTGTG 60.027 50.000 0.00 0.00 0.00 3.33
6768 7752 1.980765 AGAGCAGTTGGAGGATTGTGA 59.019 47.619 0.00 0.00 0.00 3.58
6769 7753 2.027377 AGAGCAGTTGGAGGATTGTGAG 60.027 50.000 0.00 0.00 0.00 3.51
6770 7754 1.980765 AGCAGTTGGAGGATTGTGAGA 59.019 47.619 0.00 0.00 0.00 3.27
6771 7755 2.027377 AGCAGTTGGAGGATTGTGAGAG 60.027 50.000 0.00 0.00 0.00 3.20
6772 7756 2.938756 GCAGTTGGAGGATTGTGAGAGG 60.939 54.545 0.00 0.00 0.00 3.69
6773 7757 2.568956 CAGTTGGAGGATTGTGAGAGGA 59.431 50.000 0.00 0.00 0.00 3.71
6774 7758 3.199508 CAGTTGGAGGATTGTGAGAGGAT 59.800 47.826 0.00 0.00 0.00 3.24
6775 7759 3.199508 AGTTGGAGGATTGTGAGAGGATG 59.800 47.826 0.00 0.00 0.00 3.51
6776 7760 1.487976 TGGAGGATTGTGAGAGGATGC 59.512 52.381 0.00 0.00 0.00 3.91
6777 7761 1.539929 GGAGGATTGTGAGAGGATGCG 60.540 57.143 0.00 0.00 0.00 4.73
6778 7762 1.137872 GAGGATTGTGAGAGGATGCGT 59.862 52.381 0.00 0.00 0.00 5.24
6779 7763 1.134580 AGGATTGTGAGAGGATGCGTG 60.135 52.381 0.00 0.00 0.00 5.34
6780 7764 0.654683 GATTGTGAGAGGATGCGTGC 59.345 55.000 0.00 0.00 0.00 5.34
6781 7765 1.086067 ATTGTGAGAGGATGCGTGCG 61.086 55.000 0.00 0.00 0.00 5.34
6782 7766 2.887568 GTGAGAGGATGCGTGCGG 60.888 66.667 0.00 0.00 0.00 5.69
6783 7767 3.068064 TGAGAGGATGCGTGCGGA 61.068 61.111 0.00 0.00 0.00 5.54
6784 7768 2.184322 GAGAGGATGCGTGCGGAA 59.816 61.111 0.00 0.00 0.00 4.30
6785 7769 1.227380 GAGAGGATGCGTGCGGAAT 60.227 57.895 0.00 0.00 0.00 3.01
6786 7770 0.032130 GAGAGGATGCGTGCGGAATA 59.968 55.000 0.00 0.00 0.00 1.75
6787 7771 0.032678 AGAGGATGCGTGCGGAATAG 59.967 55.000 0.00 0.00 0.00 1.73
6788 7772 0.946221 GAGGATGCGTGCGGAATAGG 60.946 60.000 0.00 0.00 0.00 2.57
6789 7773 1.227556 GGATGCGTGCGGAATAGGT 60.228 57.895 0.00 0.00 0.00 3.08
6790 7774 1.498865 GGATGCGTGCGGAATAGGTG 61.499 60.000 0.00 0.00 0.00 4.00
6791 7775 2.105960 GATGCGTGCGGAATAGGTGC 62.106 60.000 0.00 0.00 0.00 5.01
6792 7776 2.817834 GCGTGCGGAATAGGTGCA 60.818 61.111 0.00 0.00 36.02 4.57
6793 7777 2.813179 GCGTGCGGAATAGGTGCAG 61.813 63.158 0.00 0.00 39.67 4.41
6794 7778 1.447838 CGTGCGGAATAGGTGCAGT 60.448 57.895 0.00 0.00 39.67 4.40
6795 7779 1.019278 CGTGCGGAATAGGTGCAGTT 61.019 55.000 0.00 0.00 39.67 3.16
6796 7780 1.737696 CGTGCGGAATAGGTGCAGTTA 60.738 52.381 0.00 0.00 39.67 2.24
6797 7781 1.933853 GTGCGGAATAGGTGCAGTTAG 59.066 52.381 0.00 0.00 39.67 2.34
6798 7782 1.134521 TGCGGAATAGGTGCAGTTAGG 60.135 52.381 0.00 0.00 34.03 2.69
6799 7783 1.583054 CGGAATAGGTGCAGTTAGGC 58.417 55.000 0.00 0.00 0.00 3.93
6800 7784 1.139058 CGGAATAGGTGCAGTTAGGCT 59.861 52.381 0.00 0.00 34.04 4.58
6801 7785 2.364324 CGGAATAGGTGCAGTTAGGCTA 59.636 50.000 0.00 0.00 34.04 3.93
6802 7786 3.553096 CGGAATAGGTGCAGTTAGGCTAG 60.553 52.174 0.00 0.00 34.04 3.42
6803 7787 3.244249 GGAATAGGTGCAGTTAGGCTAGG 60.244 52.174 0.00 0.00 34.04 3.02
6804 7788 1.120530 TAGGTGCAGTTAGGCTAGGC 58.879 55.000 8.55 8.55 34.04 3.93
6805 7789 1.521681 GGTGCAGTTAGGCTAGGCG 60.522 63.158 11.10 0.00 34.04 5.52
6806 7790 1.218316 GTGCAGTTAGGCTAGGCGT 59.782 57.895 11.10 2.14 34.04 5.68
6807 7791 0.806492 GTGCAGTTAGGCTAGGCGTC 60.806 60.000 11.10 5.56 34.04 5.19
6808 7792 1.254975 TGCAGTTAGGCTAGGCGTCA 61.255 55.000 11.10 0.00 34.04 4.35
6809 7793 0.528684 GCAGTTAGGCTAGGCGTCAG 60.529 60.000 11.10 2.77 0.00 3.51
6810 7794 0.818296 CAGTTAGGCTAGGCGTCAGT 59.182 55.000 11.10 0.00 0.00 3.41
6811 7795 0.818296 AGTTAGGCTAGGCGTCAGTG 59.182 55.000 11.10 0.00 0.00 3.66
6812 7796 0.179108 GTTAGGCTAGGCGTCAGTGG 60.179 60.000 11.10 0.00 0.00 4.00
6813 7797 0.323999 TTAGGCTAGGCGTCAGTGGA 60.324 55.000 11.10 0.00 0.00 4.02
6814 7798 1.035932 TAGGCTAGGCGTCAGTGGAC 61.036 60.000 11.10 0.00 40.77 4.02
6815 7799 2.184579 GCTAGGCGTCAGTGGACC 59.815 66.667 0.00 0.00 41.13 4.46
6816 7800 2.490217 CTAGGCGTCAGTGGACCG 59.510 66.667 0.00 0.00 41.13 4.79
6817 7801 3.064987 CTAGGCGTCAGTGGACCGG 62.065 68.421 0.00 0.00 41.13 5.28
6821 7805 4.065281 CGTCAGTGGACCGGGGAC 62.065 72.222 6.32 0.00 41.13 4.46
6822 7806 2.603776 GTCAGTGGACCGGGGACT 60.604 66.667 6.32 0.66 38.12 3.85
6823 7807 2.203182 TCAGTGGACCGGGGACTT 59.797 61.111 6.32 0.00 0.00 3.01
6824 7808 2.214216 TCAGTGGACCGGGGACTTG 61.214 63.158 6.32 0.00 0.00 3.16
6825 7809 2.122547 AGTGGACCGGGGACTTGT 60.123 61.111 6.32 0.00 0.00 3.16
6826 7810 2.214920 AGTGGACCGGGGACTTGTC 61.215 63.158 6.32 0.00 0.00 3.18
6827 7811 3.307906 TGGACCGGGGACTTGTCG 61.308 66.667 6.32 0.00 32.41 4.35
6829 7813 4.754667 GACCGGGGACTTGTCGGC 62.755 72.222 6.32 0.00 46.87 5.54
6834 7818 4.980805 GGGACTTGTCGGCGTGCA 62.981 66.667 6.85 4.67 0.00 4.57
6835 7819 2.742372 GGACTTGTCGGCGTGCAT 60.742 61.111 6.85 0.00 0.00 3.96
6836 7820 2.476051 GACTTGTCGGCGTGCATG 59.524 61.111 6.85 11.90 0.00 4.06
6837 7821 3.027170 GACTTGTCGGCGTGCATGG 62.027 63.158 6.85 6.50 0.00 3.66
6838 7822 3.049674 CTTGTCGGCGTGCATGGT 61.050 61.111 6.85 0.00 0.00 3.55
6839 7823 3.027170 CTTGTCGGCGTGCATGGTC 62.027 63.158 6.85 0.00 0.00 4.02
6844 7828 3.788766 GGCGTGCATGGTCGACAC 61.789 66.667 18.91 7.49 34.97 3.67
6848 7832 3.041351 TGCATGGTCGACACGCAC 61.041 61.111 18.91 2.90 44.30 5.34
6849 7833 3.788766 GCATGGTCGACACGCACC 61.789 66.667 18.91 0.00 38.37 5.01
6850 7834 2.048222 CATGGTCGACACGCACCT 60.048 61.111 18.91 0.00 33.36 4.00
6851 7835 2.048222 ATGGTCGACACGCACCTG 60.048 61.111 18.91 0.00 33.36 4.00
6852 7836 4.961511 TGGTCGACACGCACCTGC 62.962 66.667 18.91 0.00 33.36 4.85
6853 7837 4.961511 GGTCGACACGCACCTGCA 62.962 66.667 18.91 0.00 42.21 4.41
6854 7838 3.702555 GTCGACACGCACCTGCAC 61.703 66.667 11.55 0.00 42.21 4.57
6886 7870 4.814294 GCAACCGCCGACGAGGAT 62.814 66.667 14.70 1.87 45.00 3.24
6887 7871 2.885644 CAACCGCCGACGAGGATG 60.886 66.667 14.70 9.94 45.00 3.51
6888 7872 4.814294 AACCGCCGACGAGGATGC 62.814 66.667 14.70 0.01 45.00 3.91
6893 7877 4.129737 CCGACGAGGATGCACGGT 62.130 66.667 9.06 0.00 45.00 4.83
6894 7878 2.126071 CGACGAGGATGCACGGTT 60.126 61.111 9.06 0.00 0.00 4.44
6895 7879 2.158959 CGACGAGGATGCACGGTTC 61.159 63.158 9.06 0.00 0.00 3.62
6896 7880 1.810030 GACGAGGATGCACGGTTCC 60.810 63.158 9.06 0.00 0.00 3.62
6897 7881 2.227089 GACGAGGATGCACGGTTCCT 62.227 60.000 6.28 6.28 45.12 3.36
6899 7883 1.519455 GAGGATGCACGGTTCCTCG 60.519 63.158 16.35 0.00 46.27 4.63
6900 7884 3.195698 GGATGCACGGTTCCTCGC 61.196 66.667 0.00 0.00 0.00 5.03
6901 7885 3.195698 GATGCACGGTTCCTCGCC 61.196 66.667 0.00 0.00 0.00 5.54
6908 7892 3.998672 GGTTCCTCGCCGTGTCCA 61.999 66.667 0.00 0.00 0.00 4.02
6909 7893 2.264794 GTTCCTCGCCGTGTCCAT 59.735 61.111 0.00 0.00 0.00 3.41
6910 7894 2.100631 GTTCCTCGCCGTGTCCATG 61.101 63.158 0.00 0.00 0.00 3.66
6911 7895 3.309436 TTCCTCGCCGTGTCCATGG 62.309 63.158 4.97 4.97 40.47 3.66
6912 7896 4.082523 CCTCGCCGTGTCCATGGT 62.083 66.667 12.58 0.00 39.68 3.55
6913 7897 2.815211 CTCGCCGTGTCCATGGTG 60.815 66.667 12.58 11.98 46.62 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 6.773976 AAAGAAATTCCAGTGTGAAGAACA 57.226 33.333 0.00 0.00 36.04 3.18
9 10 7.035612 ACAAAAGAAATTCCAGTGTGAAGAAC 58.964 34.615 0.00 0.00 0.00 3.01
10 11 7.169158 ACAAAAGAAATTCCAGTGTGAAGAA 57.831 32.000 0.00 0.00 0.00 2.52
11 12 6.773976 ACAAAAGAAATTCCAGTGTGAAGA 57.226 33.333 0.00 0.00 0.00 2.87
12 13 7.832503 AAACAAAAGAAATTCCAGTGTGAAG 57.167 32.000 0.00 0.00 0.00 3.02
13 14 9.883142 AATAAACAAAAGAAATTCCAGTGTGAA 57.117 25.926 0.00 0.00 0.00 3.18
28 29 9.471742 GCGCACCATAAAAATAATAAACAAAAG 57.528 29.630 0.30 0.00 0.00 2.27
29 30 9.209175 AGCGCACCATAAAAATAATAAACAAAA 57.791 25.926 11.47 0.00 0.00 2.44
30 31 8.651588 CAGCGCACCATAAAAATAATAAACAAA 58.348 29.630 11.47 0.00 0.00 2.83
31 32 7.276658 CCAGCGCACCATAAAAATAATAAACAA 59.723 33.333 11.47 0.00 0.00 2.83
32 33 6.754209 CCAGCGCACCATAAAAATAATAAACA 59.246 34.615 11.47 0.00 0.00 2.83
33 34 6.292114 GCCAGCGCACCATAAAAATAATAAAC 60.292 38.462 11.47 0.00 34.03 2.01
34 35 5.751028 GCCAGCGCACCATAAAAATAATAAA 59.249 36.000 11.47 0.00 34.03 1.40
35 36 5.285651 GCCAGCGCACCATAAAAATAATAA 58.714 37.500 11.47 0.00 34.03 1.40
36 37 4.555708 CGCCAGCGCACCATAAAAATAATA 60.556 41.667 11.47 0.00 34.03 0.98
37 38 3.716601 GCCAGCGCACCATAAAAATAAT 58.283 40.909 11.47 0.00 34.03 1.28
38 39 2.478709 CGCCAGCGCACCATAAAAATAA 60.479 45.455 11.47 0.00 34.03 1.40
39 40 1.064803 CGCCAGCGCACCATAAAAATA 59.935 47.619 11.47 0.00 34.03 1.40
40 41 0.179140 CGCCAGCGCACCATAAAAAT 60.179 50.000 11.47 0.00 34.03 1.82
41 42 1.211449 CGCCAGCGCACCATAAAAA 59.789 52.632 11.47 0.00 34.03 1.94
42 43 2.874019 CGCCAGCGCACCATAAAA 59.126 55.556 11.47 0.00 34.03 1.52
87 88 2.831526 AGCCTCTTCTCTGTCTTCCTTC 59.168 50.000 0.00 0.00 0.00 3.46
88 89 2.901291 AGCCTCTTCTCTGTCTTCCTT 58.099 47.619 0.00 0.00 0.00 3.36
95 96 0.980423 GGTGGAAGCCTCTTCTCTGT 59.020 55.000 6.54 0.00 0.00 3.41
120 121 1.363807 GGCAGGCAAACAGTGTTCC 59.636 57.895 9.40 7.31 0.00 3.62
121 122 1.363807 GGGCAGGCAAACAGTGTTC 59.636 57.895 9.40 0.00 0.00 3.18
317 322 1.601663 GCGACGAGGAGAAGGATGATG 60.602 57.143 0.00 0.00 0.00 3.07
318 323 0.671251 GCGACGAGGAGAAGGATGAT 59.329 55.000 0.00 0.00 0.00 2.45
319 324 0.679960 TGCGACGAGGAGAAGGATGA 60.680 55.000 0.00 0.00 0.00 2.92
320 325 0.526524 GTGCGACGAGGAGAAGGATG 60.527 60.000 0.00 0.00 0.00 3.51
321 326 1.810532 GTGCGACGAGGAGAAGGAT 59.189 57.895 0.00 0.00 0.00 3.24
654 661 1.078426 CACCTAACTTGCCCTCCCG 60.078 63.158 0.00 0.00 0.00 5.14
710 718 0.167908 CACACACCACACACACACAC 59.832 55.000 0.00 0.00 0.00 3.82
711 719 1.581727 GCACACACCACACACACACA 61.582 55.000 0.00 0.00 0.00 3.72
741 749 2.306715 AATAATCCCAACCCCGCCCC 62.307 60.000 0.00 0.00 0.00 5.80
742 750 0.397957 AAATAATCCCAACCCCGCCC 60.398 55.000 0.00 0.00 0.00 6.13
743 751 1.491668 AAAATAATCCCAACCCCGCC 58.508 50.000 0.00 0.00 0.00 6.13
744 752 3.293337 ACTAAAATAATCCCAACCCCGC 58.707 45.455 0.00 0.00 0.00 6.13
745 753 3.887110 GGACTAAAATAATCCCAACCCCG 59.113 47.826 0.00 0.00 0.00 5.73
751 759 2.171027 ACCGCGGACTAAAATAATCCCA 59.829 45.455 35.90 0.00 0.00 4.37
836 850 4.655649 GCAGGGAAAGGAATGGGAAATATT 59.344 41.667 0.00 0.00 0.00 1.28
906 925 1.337384 CGGTGGAGTGGATGGATGGA 61.337 60.000 0.00 0.00 0.00 3.41
907 926 1.146930 CGGTGGAGTGGATGGATGG 59.853 63.158 0.00 0.00 0.00 3.51
908 927 1.146930 CCGGTGGAGTGGATGGATG 59.853 63.158 0.00 0.00 0.00 3.51
909 928 2.746375 GCCGGTGGAGTGGATGGAT 61.746 63.158 1.90 0.00 0.00 3.41
964 988 0.902984 GGCCCGGGGACAAAGAAAAT 60.903 55.000 25.28 0.00 0.00 1.82
1356 1387 0.587768 TCGTCTTCGTTGTAGTCGCA 59.412 50.000 0.00 0.00 38.33 5.10
1365 1399 0.385223 CCTTCGTCGTCGTCTTCGTT 60.385 55.000 1.33 0.00 38.33 3.85
1520 1554 4.941263 GGGCAAAAAGAAACCAAAGAAAGT 59.059 37.500 0.00 0.00 0.00 2.66
1671 1720 3.287867 TGGAATGAAATGAGGAGGAGC 57.712 47.619 0.00 0.00 0.00 4.70
1688 1737 1.131638 CGAGAGGGGATTGGAATGGA 58.868 55.000 0.00 0.00 0.00 3.41
1694 1743 1.153086 CCAAGCGAGAGGGGATTGG 60.153 63.158 0.00 0.00 43.59 3.16
1746 1795 4.869451 AGGAAGAACCGAAGTAGTAGGAT 58.131 43.478 0.00 0.00 44.74 3.24
1747 1796 4.268359 GAGGAAGAACCGAAGTAGTAGGA 58.732 47.826 0.00 0.00 44.74 2.94
1752 1801 2.427812 GGAGGAGGAAGAACCGAAGTAG 59.572 54.545 0.00 0.00 44.74 2.57
1753 1802 2.454538 GGAGGAGGAAGAACCGAAGTA 58.545 52.381 0.00 0.00 44.74 2.24
1756 1805 1.255667 CGGGAGGAGGAAGAACCGAA 61.256 60.000 0.00 0.00 43.69 4.30
1780 1832 4.853924 ATGGTTTTGCAACTGAAGTAGG 57.146 40.909 0.00 0.00 32.90 3.18
1854 1911 3.876198 CCGCACGCACTTATGGGC 61.876 66.667 0.00 0.00 42.46 5.36
2305 2363 2.513204 CACGCTGCCCCTCATGAG 60.513 66.667 16.24 16.24 0.00 2.90
2306 2364 4.100084 CCACGCTGCCCCTCATGA 62.100 66.667 0.00 0.00 0.00 3.07
2307 2365 4.415150 ACCACGCTGCCCCTCATG 62.415 66.667 0.00 0.00 0.00 3.07
2308 2366 4.101448 GACCACGCTGCCCCTCAT 62.101 66.667 0.00 0.00 0.00 2.90
2310 2368 3.628646 AATGACCACGCTGCCCCTC 62.629 63.158 0.00 0.00 0.00 4.30
2311 2369 2.713531 AAAATGACCACGCTGCCCCT 62.714 55.000 0.00 0.00 0.00 4.79
2312 2370 2.212900 GAAAATGACCACGCTGCCCC 62.213 60.000 0.00 0.00 0.00 5.80
2313 2371 1.212751 GAAAATGACCACGCTGCCC 59.787 57.895 0.00 0.00 0.00 5.36
2314 2372 1.212751 GGAAAATGACCACGCTGCC 59.787 57.895 0.00 0.00 0.00 4.85
2581 2657 3.735746 CGAAAGGCAAACATGAGAAAACC 59.264 43.478 0.00 0.00 0.00 3.27
2590 2666 2.635443 CCCCGCGAAAGGCAAACAT 61.635 57.895 8.23 0.00 43.84 2.71
2641 2726 2.320587 GCGATCGGCATCCATCCAC 61.321 63.158 18.30 0.00 42.87 4.02
2817 2905 3.560068 GTGACGAACCATCACAGAAAAGT 59.440 43.478 0.00 0.00 44.87 2.66
2922 3042 9.533253 CACTTCCTTTCTGACAAAAATGTTTAT 57.467 29.630 0.00 0.00 0.00 1.40
3081 3215 1.454847 GGAACCACAGGCCACAACA 60.455 57.895 5.01 0.00 0.00 3.33
3082 3216 0.827507 ATGGAACCACAGGCCACAAC 60.828 55.000 5.01 0.00 33.93 3.32
3083 3217 0.539438 GATGGAACCACAGGCCACAA 60.539 55.000 5.01 0.00 33.93 3.33
3188 3323 3.664025 CTGCGGCCGTCTGATGGAA 62.664 63.158 28.70 0.30 0.00 3.53
3195 3330 4.681978 GGTCAACTGCGGCCGTCT 62.682 66.667 28.70 6.24 0.00 4.18
3284 3419 6.717997 ACTTTTCCACGTAATTCCCTAATTGT 59.282 34.615 0.00 0.00 36.02 2.71
3285 3420 7.153217 ACTTTTCCACGTAATTCCCTAATTG 57.847 36.000 0.00 0.00 36.02 2.32
3286 3421 9.470399 AATACTTTTCCACGTAATTCCCTAATT 57.530 29.630 0.00 0.00 38.80 1.40
3288 3423 9.382275 GTAATACTTTTCCACGTAATTCCCTAA 57.618 33.333 0.00 0.00 0.00 2.69
3289 3424 7.706179 CGTAATACTTTTCCACGTAATTCCCTA 59.294 37.037 0.00 0.00 0.00 3.53
3291 3426 6.313658 ACGTAATACTTTTCCACGTAATTCCC 59.686 38.462 0.00 0.00 43.39 3.97
3292 3427 7.175410 CACGTAATACTTTTCCACGTAATTCC 58.825 38.462 0.00 0.00 43.37 3.01
3293 3428 7.148590 ACCACGTAATACTTTTCCACGTAATTC 60.149 37.037 0.00 0.00 43.37 2.17
3304 3448 5.701750 TGCATGTACACCACGTAATACTTTT 59.298 36.000 0.00 0.00 0.00 2.27
3308 3452 6.643360 TGATATGCATGTACACCACGTAATAC 59.357 38.462 10.16 0.00 0.00 1.89
3313 3457 3.535280 TGATATGCATGTACACCACGT 57.465 42.857 10.16 0.00 0.00 4.49
3433 3599 1.878656 GACTAGTGGCGTGGCACTCT 61.879 60.000 29.17 17.19 33.26 3.24
3638 3807 1.039856 TGAAGCAGGTCTTTTTGGCC 58.960 50.000 0.00 0.00 41.82 5.36
3666 3835 2.420466 CTTTTTGGTCACGGGGCTGC 62.420 60.000 0.00 0.00 0.00 5.25
3667 3836 1.659794 CTTTTTGGTCACGGGGCTG 59.340 57.895 0.00 0.00 0.00 4.85
3884 4054 3.696898 CTGTAGCGAGCTTAGACGAAAT 58.303 45.455 1.86 0.00 0.00 2.17
3888 4058 0.592754 GGCTGTAGCGAGCTTAGACG 60.593 60.000 1.86 0.00 43.26 4.18
4115 4287 5.827797 AGAACTAGAACAAAACAGGATGCAA 59.172 36.000 0.00 0.00 42.53 4.08
4266 4440 1.760613 CACCCTACGGCATCTTTAGGA 59.239 52.381 0.00 0.00 35.28 2.94
4278 4452 0.971386 AACACCCTGTACACCCTACG 59.029 55.000 0.00 0.00 0.00 3.51
4342 4523 3.563808 CCTTGTGATCCGTTTCTGAAACA 59.436 43.478 27.24 13.38 41.44 2.83
4344 4525 2.552315 GCCTTGTGATCCGTTTCTGAAA 59.448 45.455 0.00 0.00 0.00 2.69
4354 4535 3.515602 ATCCCATTAGCCTTGTGATCC 57.484 47.619 0.00 0.00 0.00 3.36
4360 4563 7.330262 ACAATGTAAAAATCCCATTAGCCTTG 58.670 34.615 0.00 0.00 0.00 3.61
4414 4662 8.747538 ACAGTCTAGTACCAAAAGTTTTTCAT 57.252 30.769 0.00 0.00 0.00 2.57
4434 4682 2.234908 AGATCTGTGGTTGCCTACAGTC 59.765 50.000 0.00 4.54 43.59 3.51
4435 4683 2.260822 AGATCTGTGGTTGCCTACAGT 58.739 47.619 0.00 0.00 43.59 3.55
4436 4684 3.340814 AAGATCTGTGGTTGCCTACAG 57.659 47.619 0.00 0.00 44.31 2.74
4438 4686 3.412386 ACAAAGATCTGTGGTTGCCTAC 58.588 45.455 17.37 0.00 0.00 3.18
4439 4687 3.788227 ACAAAGATCTGTGGTTGCCTA 57.212 42.857 17.37 0.00 0.00 3.93
4579 4888 7.373493 ACATGAATGTAGGCAAAGAAAGAAAG 58.627 34.615 0.00 0.00 39.68 2.62
4626 4992 7.657761 CGTATTAATAGTCCAAAGAAGGCATCT 59.342 37.037 0.00 0.00 41.32 2.90
4650 5016 6.649557 GGCCTTATTTATCACTTAGTATGCGT 59.350 38.462 0.00 0.00 0.00 5.24
4656 5022 8.034313 TGATCAGGCCTTATTTATCACTTAGT 57.966 34.615 0.00 0.00 0.00 2.24
4667 5033 6.460123 CGCTAACAATTTGATCAGGCCTTATT 60.460 38.462 0.00 0.00 0.00 1.40
4672 5038 2.682856 TCGCTAACAATTTGATCAGGCC 59.317 45.455 2.79 0.00 0.00 5.19
4711 5077 5.221461 ACCGACTTTGAGATGACTTACAGTT 60.221 40.000 0.00 0.00 0.00 3.16
4735 5101 9.857656 AATAAGATAAATTCCTCAAGATCAGCA 57.142 29.630 0.00 0.00 0.00 4.41
4779 5145 9.554053 TCTGGGGAATTTTTAATCCAAATAAGA 57.446 29.630 0.00 0.00 37.46 2.10
4781 5147 9.952030 GTTCTGGGGAATTTTTAATCCAAATAA 57.048 29.630 0.00 0.00 37.46 1.40
4782 5148 9.105844 TGTTCTGGGGAATTTTTAATCCAAATA 57.894 29.630 0.00 0.00 37.46 1.40
4783 5149 7.983363 TGTTCTGGGGAATTTTTAATCCAAAT 58.017 30.769 0.00 0.00 37.46 2.32
4784 5150 7.291182 TCTGTTCTGGGGAATTTTTAATCCAAA 59.709 33.333 0.00 0.00 37.46 3.28
4785 5151 6.784969 TCTGTTCTGGGGAATTTTTAATCCAA 59.215 34.615 0.00 0.00 37.46 3.53
4786 5152 6.318913 TCTGTTCTGGGGAATTTTTAATCCA 58.681 36.000 0.00 0.00 37.46 3.41
4787 5153 6.850752 TCTGTTCTGGGGAATTTTTAATCC 57.149 37.500 0.00 0.00 33.71 3.01
4788 5154 7.331934 GCTTTCTGTTCTGGGGAATTTTTAATC 59.668 37.037 0.00 0.00 33.71 1.75
4789 5155 7.161404 GCTTTCTGTTCTGGGGAATTTTTAAT 58.839 34.615 0.00 0.00 33.71 1.40
4790 5156 6.463755 GGCTTTCTGTTCTGGGGAATTTTTAA 60.464 38.462 0.00 0.00 33.71 1.52
4791 5157 5.011635 GGCTTTCTGTTCTGGGGAATTTTTA 59.988 40.000 0.00 0.00 33.71 1.52
4792 5158 4.202357 GGCTTTCTGTTCTGGGGAATTTTT 60.202 41.667 0.00 0.00 33.71 1.94
4793 5159 3.324846 GGCTTTCTGTTCTGGGGAATTTT 59.675 43.478 0.00 0.00 33.71 1.82
4794 5160 2.899900 GGCTTTCTGTTCTGGGGAATTT 59.100 45.455 0.00 0.00 33.71 1.82
4804 5170 1.070134 GGTTTTGGGGGCTTTCTGTTC 59.930 52.381 0.00 0.00 0.00 3.18
4810 5176 2.424091 CCAATTTGGTTTTGGGGGCTTT 60.424 45.455 7.31 0.00 40.00 3.51
4811 5177 1.144708 CCAATTTGGTTTTGGGGGCTT 59.855 47.619 7.31 0.00 40.00 4.35
4829 5195 3.288964 TGCCGTTTTTAGAAAACTCCCA 58.711 40.909 12.72 5.84 0.00 4.37
4834 5200 7.169140 ACTGAATGATTGCCGTTTTTAGAAAAC 59.831 33.333 6.28 6.28 0.00 2.43
4849 5491 7.837202 AAACAATGCCAATACTGAATGATTG 57.163 32.000 0.00 0.00 33.63 2.67
4860 5502 7.601886 CACAAACATCCTAAAACAATGCCAATA 59.398 33.333 0.00 0.00 0.00 1.90
4896 5538 9.131791 AGAAATCTTTTATTGGTAGTGTGTTGT 57.868 29.630 0.00 0.00 0.00 3.32
4918 5560 9.832445 GGATCTGGTATCTTAACAACATAGAAA 57.168 33.333 0.00 0.00 0.00 2.52
4919 5561 8.429641 GGGATCTGGTATCTTAACAACATAGAA 58.570 37.037 0.00 0.00 0.00 2.10
4920 5562 7.567250 TGGGATCTGGTATCTTAACAACATAGA 59.433 37.037 0.00 0.00 0.00 1.98
4921 5563 7.657761 GTGGGATCTGGTATCTTAACAACATAG 59.342 40.741 0.00 0.00 0.00 2.23
4924 5574 5.487488 AGTGGGATCTGGTATCTTAACAACA 59.513 40.000 0.00 0.00 0.00 3.33
4928 5578 7.793036 AGTTAAGTGGGATCTGGTATCTTAAC 58.207 38.462 13.47 13.47 42.28 2.01
4942 5592 4.141135 TGAACCAAATGGAGTTAAGTGGGA 60.141 41.667 6.42 0.00 38.94 4.37
5076 5726 6.887002 AGTCTCTCTTCCATTACCAATTTTCC 59.113 38.462 0.00 0.00 0.00 3.13
5085 5735 4.340950 CCTGGAGAGTCTCTCTTCCATTAC 59.659 50.000 25.55 9.92 41.35 1.89
5285 6252 1.075374 ACCTACCACACATGCCACAAT 59.925 47.619 0.00 0.00 0.00 2.71
5286 6253 0.476338 ACCTACCACACATGCCACAA 59.524 50.000 0.00 0.00 0.00 3.33
5312 6279 3.442076 GTGTACTAGGGATAGGGATGGG 58.558 54.545 0.00 0.00 0.00 4.00
5485 6455 7.222872 GTCCCATCATCTCAAATCTACAAGAT 58.777 38.462 0.00 0.00 36.28 2.40
5503 6473 2.167075 CCAGAAAAGCATTGGTCCCATC 59.833 50.000 0.00 0.00 0.00 3.51
5583 6553 3.000041 AGAATTCATAAACAGCGACGCA 59.000 40.909 23.70 0.00 0.00 5.24
5609 6579 8.882736 TCTTTCACAACTGTTGCATATATAGTG 58.117 33.333 19.82 7.86 0.00 2.74
5743 6720 3.130516 CCGTGAGTTGGATTGCTCTACTA 59.869 47.826 0.00 0.00 33.22 1.82
5744 6721 2.093973 CCGTGAGTTGGATTGCTCTACT 60.094 50.000 0.00 0.00 33.22 2.57
5745 6722 2.094182 TCCGTGAGTTGGATTGCTCTAC 60.094 50.000 0.00 0.00 33.22 2.59
5809 6786 1.302993 TGCTGCTGCTGCTGATCAA 60.303 52.632 27.67 7.82 40.01 2.57
5810 6787 1.745489 CTGCTGCTGCTGCTGATCA 60.745 57.895 27.67 12.84 40.01 2.92
5811 6788 3.102985 CTGCTGCTGCTGCTGATC 58.897 61.111 27.67 9.30 40.01 2.92
6064 7043 2.984435 TAGTGACACCTGACCCTGTA 57.016 50.000 0.84 0.00 0.00 2.74
6116 7100 6.709846 AGCAGATGAGCTAAATTAGTCATTCC 59.290 38.462 14.55 7.36 44.50 3.01
6117 7101 7.727331 AGCAGATGAGCTAAATTAGTCATTC 57.273 36.000 14.55 10.27 44.50 2.67
6178 7162 1.342374 TGCCACCTCTCAGCTCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
6189 7173 0.536006 GTTTGAGCTGTGCCACCTCT 60.536 55.000 0.00 0.00 0.00 3.69
6190 7174 1.518903 GGTTTGAGCTGTGCCACCTC 61.519 60.000 0.00 0.00 0.00 3.85
6191 7175 1.529244 GGTTTGAGCTGTGCCACCT 60.529 57.895 0.00 0.00 0.00 4.00
6212 7196 2.370281 AATCGGCTACACAGTGTGAG 57.630 50.000 29.58 20.84 36.96 3.51
6282 7266 1.741706 CAGTAGCCAAATCTGCACAGG 59.258 52.381 0.00 0.00 0.00 4.00
6327 7311 6.642131 TCGCCAAAATCAGAAAAAGAAAGATG 59.358 34.615 0.00 0.00 0.00 2.90
6337 7321 2.958213 GCCATTCGCCAAAATCAGAAA 58.042 42.857 0.00 0.00 0.00 2.52
6338 7322 2.652941 GCCATTCGCCAAAATCAGAA 57.347 45.000 0.00 0.00 0.00 3.02
6365 7349 1.541147 CCATGTTCACCCATGACACAC 59.459 52.381 0.00 0.00 43.99 3.82
6370 7354 2.627221 CAACAACCATGTTCACCCATGA 59.373 45.455 0.00 0.00 46.78 3.07
6382 7366 6.951198 TCCTGATTTGGTATTACAACAACCAT 59.049 34.615 0.00 0.00 42.65 3.55
6409 7393 9.968743 CATTTCAATAGAAAAACTCCGTAGTAC 57.031 33.333 0.00 0.00 46.06 2.73
6411 7395 7.527457 GCATTTCAATAGAAAAACTCCGTAGT 58.473 34.615 0.00 0.00 46.06 2.73
6415 7399 4.793216 CCGCATTTCAATAGAAAAACTCCG 59.207 41.667 0.00 0.00 46.06 4.63
6416 7400 4.562789 GCCGCATTTCAATAGAAAAACTCC 59.437 41.667 0.00 0.00 46.06 3.85
6417 7401 4.262976 CGCCGCATTTCAATAGAAAAACTC 59.737 41.667 0.00 0.00 46.06 3.01
6426 7410 3.791789 GCAGAAATCGCCGCATTTCAATA 60.792 43.478 20.61 0.00 42.86 1.90
6430 7414 1.196130 CGCAGAAATCGCCGCATTTC 61.196 55.000 15.06 15.06 41.37 2.17
6431 7415 1.226379 CGCAGAAATCGCCGCATTT 60.226 52.632 0.00 0.00 0.00 2.32
6439 7423 2.703409 CTTCCGCCGCAGAAATCG 59.297 61.111 0.00 0.00 0.00 3.34
6440 7424 2.398554 TGCTTCCGCCGCAGAAATC 61.399 57.895 0.00 0.00 34.43 2.17
6441 7425 2.359850 TGCTTCCGCCGCAGAAAT 60.360 55.556 0.00 0.00 34.43 2.17
6463 7447 2.103042 CCGGTTAGCAGTGCTCAGC 61.103 63.158 23.64 19.61 40.44 4.26
6471 7455 1.518572 CCGCTGTACCGGTTAGCAG 60.519 63.158 30.68 26.27 43.24 4.24
6480 7464 0.108138 ATCTGTTCTGCCGCTGTACC 60.108 55.000 4.89 0.00 0.00 3.34
6481 7465 1.002366 CATCTGTTCTGCCGCTGTAC 58.998 55.000 0.82 0.82 0.00 2.90
6488 7472 1.654954 CCAGCTGCATCTGTTCTGCC 61.655 60.000 15.94 0.00 38.89 4.85
6491 7475 0.390866 CGTCCAGCTGCATCTGTTCT 60.391 55.000 15.94 0.00 32.32 3.01
6492 7476 0.390340 TCGTCCAGCTGCATCTGTTC 60.390 55.000 15.94 7.74 32.32 3.18
6497 7481 4.531332 GAAATTTATCGTCCAGCTGCATC 58.469 43.478 8.66 0.00 0.00 3.91
6503 7487 2.607635 TCTGCGAAATTTATCGTCCAGC 59.392 45.455 1.82 0.00 44.49 4.85
6504 7488 4.857871 TTCTGCGAAATTTATCGTCCAG 57.142 40.909 1.82 2.22 44.49 3.86
6564 7548 3.274288 GCCAAGTCTTGACAAGGGATAG 58.726 50.000 14.42 3.67 0.00 2.08
6579 7563 4.464008 TCTGACAAAGAAAGATGCCAAGT 58.536 39.130 0.00 0.00 29.54 3.16
6584 7568 6.034591 CCATTGATCTGACAAAGAAAGATGC 58.965 40.000 0.00 0.00 38.79 3.91
6595 7579 7.575532 GCATTACAAGTTTCCATTGATCTGACA 60.576 37.037 0.00 0.00 0.00 3.58
6596 7580 6.749118 GCATTACAAGTTTCCATTGATCTGAC 59.251 38.462 0.00 0.00 0.00 3.51
6610 7594 4.218417 CAGTTTAGCAGGGCATTACAAGTT 59.782 41.667 0.00 0.00 0.00 2.66
6612 7596 4.009675 TCAGTTTAGCAGGGCATTACAAG 58.990 43.478 0.00 0.00 0.00 3.16
6613 7597 4.027674 TCAGTTTAGCAGGGCATTACAA 57.972 40.909 0.00 0.00 0.00 2.41
6620 7604 0.038310 AGGGTTCAGTTTAGCAGGGC 59.962 55.000 0.00 0.00 0.00 5.19
6622 7606 1.275291 TCGAGGGTTCAGTTTAGCAGG 59.725 52.381 0.00 0.00 0.00 4.85
6628 7612 0.038159 CTCGCTCGAGGGTTCAGTTT 60.038 55.000 26.49 0.00 38.51 2.66
6632 7616 2.701780 GCTCTCGCTCGAGGGTTCA 61.702 63.158 26.49 9.08 44.25 3.18
6636 7620 3.591835 GAGGCTCTCGCTCGAGGG 61.592 72.222 22.60 22.60 45.15 4.30
6645 7629 1.205568 CGCTATCGACGAGGCTCTC 59.794 63.158 13.50 8.26 38.10 3.20
6646 7630 1.227586 TCGCTATCGACGAGGCTCT 60.228 57.895 13.50 0.00 40.21 4.09
6647 7631 3.331319 TCGCTATCGACGAGGCTC 58.669 61.111 18.68 3.87 40.21 4.70
6655 7639 1.028330 ACTTCGTGGGTCGCTATCGA 61.028 55.000 0.00 0.00 43.28 3.59
6656 7640 0.659427 TACTTCGTGGGTCGCTATCG 59.341 55.000 0.00 0.00 39.67 2.92
6657 7641 2.664971 CGATACTTCGTGGGTCGCTATC 60.665 54.545 0.00 0.00 40.53 2.08
6658 7642 1.266175 CGATACTTCGTGGGTCGCTAT 59.734 52.381 0.00 0.00 40.53 2.97
6659 7643 0.659427 CGATACTTCGTGGGTCGCTA 59.341 55.000 0.00 0.00 40.53 4.26
6660 7644 1.432251 CGATACTTCGTGGGTCGCT 59.568 57.895 0.00 0.00 40.53 4.93
6661 7645 1.588139 CCGATACTTCGTGGGTCGC 60.588 63.158 0.00 0.00 43.97 5.19
6662 7646 1.588139 GCCGATACTTCGTGGGTCG 60.588 63.158 0.00 0.00 43.97 4.79
6663 7647 0.248949 GAGCCGATACTTCGTGGGTC 60.249 60.000 0.00 0.00 43.97 4.46
6664 7648 1.814527 GAGCCGATACTTCGTGGGT 59.185 57.895 0.00 0.00 43.97 4.51
6665 7649 1.299165 CGAGCCGATACTTCGTGGG 60.299 63.158 0.00 0.00 43.97 4.61
6666 7650 0.866061 CACGAGCCGATACTTCGTGG 60.866 60.000 16.00 1.22 46.82 4.94
6667 7651 2.566997 CACGAGCCGATACTTCGTG 58.433 57.895 11.15 11.15 45.83 4.35
6668 7652 1.226603 GCACGAGCCGATACTTCGT 60.227 57.895 0.00 0.00 43.97 3.85
6669 7653 3.601981 GCACGAGCCGATACTTCG 58.398 61.111 0.00 0.00 45.08 3.79
6685 7669 3.236618 GATGAATTACGCCGCCGGC 62.237 63.158 20.42 20.42 46.75 6.13
6686 7670 2.604174 GGATGAATTACGCCGCCGG 61.604 63.158 0.00 0.00 39.22 6.13
6687 7671 2.935955 GGATGAATTACGCCGCCG 59.064 61.111 0.00 0.00 41.14 6.46
6688 7672 1.593209 TCGGATGAATTACGCCGCC 60.593 57.895 0.00 0.00 43.26 6.13
6689 7673 1.149361 TGTCGGATGAATTACGCCGC 61.149 55.000 0.00 0.00 43.26 6.53
6690 7674 0.852777 CTGTCGGATGAATTACGCCG 59.147 55.000 0.00 0.00 44.83 6.46
6691 7675 1.935933 ACTGTCGGATGAATTACGCC 58.064 50.000 0.00 0.00 0.00 5.68
6692 7676 2.030457 CCAACTGTCGGATGAATTACGC 59.970 50.000 0.00 0.00 0.00 4.42
6693 7677 2.607635 CCCAACTGTCGGATGAATTACG 59.392 50.000 0.00 0.00 0.00 3.18
6694 7678 3.869065 TCCCAACTGTCGGATGAATTAC 58.131 45.455 0.00 0.00 0.00 1.89
6695 7679 4.258543 GTTCCCAACTGTCGGATGAATTA 58.741 43.478 0.00 0.00 0.00 1.40
6696 7680 3.081804 GTTCCCAACTGTCGGATGAATT 58.918 45.455 0.00 0.00 0.00 2.17
6697 7681 2.618045 GGTTCCCAACTGTCGGATGAAT 60.618 50.000 0.00 0.00 0.00 2.57
6698 7682 1.271163 GGTTCCCAACTGTCGGATGAA 60.271 52.381 0.00 0.00 0.00 2.57
6699 7683 0.323629 GGTTCCCAACTGTCGGATGA 59.676 55.000 0.00 0.00 0.00 2.92
6700 7684 0.036164 TGGTTCCCAACTGTCGGATG 59.964 55.000 0.00 0.00 0.00 3.51
6701 7685 0.324943 CTGGTTCCCAACTGTCGGAT 59.675 55.000 0.00 0.00 30.80 4.18
6702 7686 1.752198 CTGGTTCCCAACTGTCGGA 59.248 57.895 0.00 0.00 30.80 4.55
6703 7687 1.302511 CCTGGTTCCCAACTGTCGG 60.303 63.158 0.00 0.00 30.80 4.79
6704 7688 1.302511 CCCTGGTTCCCAACTGTCG 60.303 63.158 0.00 0.00 30.80 4.35
6705 7689 1.603739 GCCCTGGTTCCCAACTGTC 60.604 63.158 0.00 0.00 30.80 3.51
6706 7690 1.943730 TTGCCCTGGTTCCCAACTGT 61.944 55.000 0.00 0.00 30.80 3.55
6707 7691 1.152567 TTGCCCTGGTTCCCAACTG 60.153 57.895 0.00 0.00 30.80 3.16
6708 7692 1.153756 CTTGCCCTGGTTCCCAACT 59.846 57.895 0.00 0.00 30.80 3.16
6709 7693 0.759060 AACTTGCCCTGGTTCCCAAC 60.759 55.000 0.00 0.00 30.80 3.77
6710 7694 0.758685 CAACTTGCCCTGGTTCCCAA 60.759 55.000 0.00 0.00 30.80 4.12
6711 7695 1.152567 CAACTTGCCCTGGTTCCCA 60.153 57.895 0.00 0.00 0.00 4.37
6712 7696 1.908299 CCAACTTGCCCTGGTTCCC 60.908 63.158 0.00 0.00 0.00 3.97
6713 7697 0.469144 TTCCAACTTGCCCTGGTTCC 60.469 55.000 0.00 0.00 34.11 3.62
6714 7698 0.961753 CTTCCAACTTGCCCTGGTTC 59.038 55.000 0.00 0.00 34.11 3.62
6715 7699 0.469892 CCTTCCAACTTGCCCTGGTT 60.470 55.000 0.00 0.00 34.11 3.67
6716 7700 1.153756 CCTTCCAACTTGCCCTGGT 59.846 57.895 0.00 0.00 34.11 4.00
6717 7701 1.153756 ACCTTCCAACTTGCCCTGG 59.846 57.895 0.00 0.00 0.00 4.45
6718 7702 0.468029 ACACCTTCCAACTTGCCCTG 60.468 55.000 0.00 0.00 0.00 4.45
6719 7703 1.073923 CTACACCTTCCAACTTGCCCT 59.926 52.381 0.00 0.00 0.00 5.19
6720 7704 1.073284 TCTACACCTTCCAACTTGCCC 59.927 52.381 0.00 0.00 0.00 5.36
6721 7705 2.561478 TCTACACCTTCCAACTTGCC 57.439 50.000 0.00 0.00 0.00 4.52
6722 7706 5.086104 TCTATCTACACCTTCCAACTTGC 57.914 43.478 0.00 0.00 0.00 4.01
6723 7707 8.239038 TCTATCTATCTACACCTTCCAACTTG 57.761 38.462 0.00 0.00 0.00 3.16
6724 7708 8.282982 TCTCTATCTATCTACACCTTCCAACTT 58.717 37.037 0.00 0.00 0.00 2.66
6725 7709 7.817440 TCTCTATCTATCTACACCTTCCAACT 58.183 38.462 0.00 0.00 0.00 3.16
6726 7710 7.308951 GCTCTCTATCTATCTACACCTTCCAAC 60.309 44.444 0.00 0.00 0.00 3.77
6727 7711 6.717540 GCTCTCTATCTATCTACACCTTCCAA 59.282 42.308 0.00 0.00 0.00 3.53
6728 7712 6.183361 TGCTCTCTATCTATCTACACCTTCCA 60.183 42.308 0.00 0.00 0.00 3.53
6729 7713 6.242396 TGCTCTCTATCTATCTACACCTTCC 58.758 44.000 0.00 0.00 0.00 3.46
6730 7714 6.940298 ACTGCTCTCTATCTATCTACACCTTC 59.060 42.308 0.00 0.00 0.00 3.46
6731 7715 6.848069 ACTGCTCTCTATCTATCTACACCTT 58.152 40.000 0.00 0.00 0.00 3.50
6732 7716 6.448369 ACTGCTCTCTATCTATCTACACCT 57.552 41.667 0.00 0.00 0.00 4.00
6733 7717 6.072175 CCAACTGCTCTCTATCTATCTACACC 60.072 46.154 0.00 0.00 0.00 4.16
6734 7718 6.712998 TCCAACTGCTCTCTATCTATCTACAC 59.287 42.308 0.00 0.00 0.00 2.90
6735 7719 6.842676 TCCAACTGCTCTCTATCTATCTACA 58.157 40.000 0.00 0.00 0.00 2.74
6736 7720 6.374333 CCTCCAACTGCTCTCTATCTATCTAC 59.626 46.154 0.00 0.00 0.00 2.59
6737 7721 6.273495 TCCTCCAACTGCTCTCTATCTATCTA 59.727 42.308 0.00 0.00 0.00 1.98
6738 7722 5.074377 TCCTCCAACTGCTCTCTATCTATCT 59.926 44.000 0.00 0.00 0.00 1.98
6739 7723 5.321102 TCCTCCAACTGCTCTCTATCTATC 58.679 45.833 0.00 0.00 0.00 2.08
6740 7724 5.332106 TCCTCCAACTGCTCTCTATCTAT 57.668 43.478 0.00 0.00 0.00 1.98
6741 7725 4.797912 TCCTCCAACTGCTCTCTATCTA 57.202 45.455 0.00 0.00 0.00 1.98
6742 7726 3.678965 TCCTCCAACTGCTCTCTATCT 57.321 47.619 0.00 0.00 0.00 1.98
6743 7727 4.100808 ACAATCCTCCAACTGCTCTCTATC 59.899 45.833 0.00 0.00 0.00 2.08
6744 7728 4.036518 ACAATCCTCCAACTGCTCTCTAT 58.963 43.478 0.00 0.00 0.00 1.98
6745 7729 3.196469 CACAATCCTCCAACTGCTCTCTA 59.804 47.826 0.00 0.00 0.00 2.43
6746 7730 2.027377 CACAATCCTCCAACTGCTCTCT 60.027 50.000 0.00 0.00 0.00 3.10
6747 7731 2.027745 TCACAATCCTCCAACTGCTCTC 60.028 50.000 0.00 0.00 0.00 3.20
6748 7732 1.980765 TCACAATCCTCCAACTGCTCT 59.019 47.619 0.00 0.00 0.00 4.09
6749 7733 2.027745 TCTCACAATCCTCCAACTGCTC 60.028 50.000 0.00 0.00 0.00 4.26
6750 7734 1.980765 TCTCACAATCCTCCAACTGCT 59.019 47.619 0.00 0.00 0.00 4.24
6751 7735 2.354259 CTCTCACAATCCTCCAACTGC 58.646 52.381 0.00 0.00 0.00 4.40
6752 7736 2.568956 TCCTCTCACAATCCTCCAACTG 59.431 50.000 0.00 0.00 0.00 3.16
6753 7737 2.907892 TCCTCTCACAATCCTCCAACT 58.092 47.619 0.00 0.00 0.00 3.16
6754 7738 3.539604 CATCCTCTCACAATCCTCCAAC 58.460 50.000 0.00 0.00 0.00 3.77
6755 7739 2.092753 GCATCCTCTCACAATCCTCCAA 60.093 50.000 0.00 0.00 0.00 3.53
6756 7740 1.487976 GCATCCTCTCACAATCCTCCA 59.512 52.381 0.00 0.00 0.00 3.86
6757 7741 1.539929 CGCATCCTCTCACAATCCTCC 60.540 57.143 0.00 0.00 0.00 4.30
6758 7742 1.137872 ACGCATCCTCTCACAATCCTC 59.862 52.381 0.00 0.00 0.00 3.71
6759 7743 1.134580 CACGCATCCTCTCACAATCCT 60.135 52.381 0.00 0.00 0.00 3.24
6760 7744 1.293924 CACGCATCCTCTCACAATCC 58.706 55.000 0.00 0.00 0.00 3.01
6761 7745 0.654683 GCACGCATCCTCTCACAATC 59.345 55.000 0.00 0.00 0.00 2.67
6762 7746 1.086067 CGCACGCATCCTCTCACAAT 61.086 55.000 0.00 0.00 0.00 2.71
6763 7747 1.737735 CGCACGCATCCTCTCACAA 60.738 57.895 0.00 0.00 0.00 3.33
6764 7748 2.125952 CGCACGCATCCTCTCACA 60.126 61.111 0.00 0.00 0.00 3.58
6765 7749 2.835701 TTCCGCACGCATCCTCTCAC 62.836 60.000 0.00 0.00 0.00 3.51
6766 7750 1.960040 ATTCCGCACGCATCCTCTCA 61.960 55.000 0.00 0.00 0.00 3.27
6767 7751 0.032130 TATTCCGCACGCATCCTCTC 59.968 55.000 0.00 0.00 0.00 3.20
6768 7752 0.032678 CTATTCCGCACGCATCCTCT 59.967 55.000 0.00 0.00 0.00 3.69
6769 7753 0.946221 CCTATTCCGCACGCATCCTC 60.946 60.000 0.00 0.00 0.00 3.71
6770 7754 1.069765 CCTATTCCGCACGCATCCT 59.930 57.895 0.00 0.00 0.00 3.24
6771 7755 1.227556 ACCTATTCCGCACGCATCC 60.228 57.895 0.00 0.00 0.00 3.51
6772 7756 1.934463 CACCTATTCCGCACGCATC 59.066 57.895 0.00 0.00 0.00 3.91
6773 7757 2.180204 GCACCTATTCCGCACGCAT 61.180 57.895 0.00 0.00 0.00 4.73
6774 7758 2.817834 GCACCTATTCCGCACGCA 60.818 61.111 0.00 0.00 0.00 5.24
6775 7759 2.813179 CTGCACCTATTCCGCACGC 61.813 63.158 0.00 0.00 0.00 5.34
6776 7760 1.019278 AACTGCACCTATTCCGCACG 61.019 55.000 0.00 0.00 0.00 5.34
6777 7761 1.933853 CTAACTGCACCTATTCCGCAC 59.066 52.381 0.00 0.00 0.00 5.34
6778 7762 1.134521 CCTAACTGCACCTATTCCGCA 60.135 52.381 0.00 0.00 0.00 5.69
6779 7763 1.583054 CCTAACTGCACCTATTCCGC 58.417 55.000 0.00 0.00 0.00 5.54
6780 7764 1.139058 AGCCTAACTGCACCTATTCCG 59.861 52.381 0.00 0.00 0.00 4.30
6781 7765 3.244249 CCTAGCCTAACTGCACCTATTCC 60.244 52.174 0.00 0.00 0.00 3.01
6782 7766 3.804063 GCCTAGCCTAACTGCACCTATTC 60.804 52.174 0.00 0.00 0.00 1.75
6783 7767 2.104963 GCCTAGCCTAACTGCACCTATT 59.895 50.000 0.00 0.00 0.00 1.73
6784 7768 1.694696 GCCTAGCCTAACTGCACCTAT 59.305 52.381 0.00 0.00 0.00 2.57
6785 7769 1.120530 GCCTAGCCTAACTGCACCTA 58.879 55.000 0.00 0.00 0.00 3.08
6786 7770 1.908483 GCCTAGCCTAACTGCACCT 59.092 57.895 0.00 0.00 0.00 4.00
6787 7771 1.521681 CGCCTAGCCTAACTGCACC 60.522 63.158 0.00 0.00 0.00 5.01
6788 7772 0.806492 GACGCCTAGCCTAACTGCAC 60.806 60.000 0.00 0.00 0.00 4.57
6789 7773 1.254975 TGACGCCTAGCCTAACTGCA 61.255 55.000 0.00 0.00 0.00 4.41
6790 7774 0.528684 CTGACGCCTAGCCTAACTGC 60.529 60.000 0.00 0.00 0.00 4.40
6791 7775 0.818296 ACTGACGCCTAGCCTAACTG 59.182 55.000 0.00 0.00 0.00 3.16
6792 7776 0.818296 CACTGACGCCTAGCCTAACT 59.182 55.000 0.00 0.00 0.00 2.24
6793 7777 0.179108 CCACTGACGCCTAGCCTAAC 60.179 60.000 0.00 0.00 0.00 2.34
6794 7778 0.323999 TCCACTGACGCCTAGCCTAA 60.324 55.000 0.00 0.00 0.00 2.69
6795 7779 1.035932 GTCCACTGACGCCTAGCCTA 61.036 60.000 0.00 0.00 0.00 3.93
6796 7780 2.037367 TCCACTGACGCCTAGCCT 59.963 61.111 0.00 0.00 0.00 4.58
6797 7781 2.184579 GTCCACTGACGCCTAGCC 59.815 66.667 0.00 0.00 0.00 3.93
6798 7782 2.184579 GGTCCACTGACGCCTAGC 59.815 66.667 0.00 0.00 42.73 3.42
6799 7783 2.490217 CGGTCCACTGACGCCTAG 59.510 66.667 0.00 0.00 42.73 3.02
6800 7784 3.066190 CCGGTCCACTGACGCCTA 61.066 66.667 0.00 0.00 42.73 3.93
6804 7788 4.065281 GTCCCCGGTCCACTGACG 62.065 72.222 0.00 0.00 42.73 4.35
6805 7789 2.214920 AAGTCCCCGGTCCACTGAC 61.215 63.158 0.00 0.00 40.98 3.51
6806 7790 2.203182 AAGTCCCCGGTCCACTGA 59.797 61.111 0.00 0.00 0.00 3.41
6807 7791 2.347490 CAAGTCCCCGGTCCACTG 59.653 66.667 0.00 0.00 0.00 3.66
6808 7792 2.122547 ACAAGTCCCCGGTCCACT 60.123 61.111 0.00 0.00 0.00 4.00
6809 7793 2.346365 GACAAGTCCCCGGTCCAC 59.654 66.667 0.00 0.00 0.00 4.02
6810 7794 3.307906 CGACAAGTCCCCGGTCCA 61.308 66.667 0.00 0.00 0.00 4.02
6811 7795 4.078516 CCGACAAGTCCCCGGTCC 62.079 72.222 0.00 0.00 38.55 4.46
6812 7796 4.754667 GCCGACAAGTCCCCGGTC 62.755 72.222 0.00 0.00 44.63 4.79
6817 7801 4.980805 TGCACGCCGACAAGTCCC 62.981 66.667 0.00 0.00 0.00 4.46
6818 7802 2.742372 ATGCACGCCGACAAGTCC 60.742 61.111 0.00 0.00 0.00 3.85
6819 7803 2.476051 CATGCACGCCGACAAGTC 59.524 61.111 0.00 0.00 0.00 3.01
6820 7804 3.049674 CCATGCACGCCGACAAGT 61.050 61.111 0.00 0.00 0.00 3.16
6821 7805 3.027170 GACCATGCACGCCGACAAG 62.027 63.158 0.00 0.00 0.00 3.16
6822 7806 3.047280 GACCATGCACGCCGACAA 61.047 61.111 0.00 0.00 0.00 3.18
6827 7811 3.788766 GTGTCGACCATGCACGCC 61.789 66.667 14.12 0.00 0.00 5.68
6828 7812 4.134187 CGTGTCGACCATGCACGC 62.134 66.667 14.12 0.00 46.86 5.34
6833 7817 2.048222 AGGTGCGTGTCGACCATG 60.048 61.111 14.12 7.88 32.50 3.66
6834 7818 2.048222 CAGGTGCGTGTCGACCAT 60.048 61.111 14.12 0.00 32.50 3.55
6835 7819 4.961511 GCAGGTGCGTGTCGACCA 62.962 66.667 14.12 0.30 32.50 4.02
6836 7820 4.961511 TGCAGGTGCGTGTCGACC 62.962 66.667 14.12 3.43 45.83 4.79
6837 7821 3.702555 GTGCAGGTGCGTGTCGAC 61.703 66.667 9.11 9.11 45.83 4.20
6869 7853 4.814294 ATCCTCGTCGGCGGTTGC 62.814 66.667 10.62 0.00 38.89 4.17
6870 7854 2.885644 CATCCTCGTCGGCGGTTG 60.886 66.667 10.62 0.00 38.89 3.77
6871 7855 4.814294 GCATCCTCGTCGGCGGTT 62.814 66.667 10.62 0.00 38.89 4.44
6876 7860 3.642778 AACCGTGCATCCTCGTCGG 62.643 63.158 8.00 8.00 45.53 4.79
6877 7861 2.126071 AACCGTGCATCCTCGTCG 60.126 61.111 0.00 0.00 0.00 5.12
6878 7862 1.810030 GGAACCGTGCATCCTCGTC 60.810 63.158 0.00 0.00 32.75 4.20
6879 7863 2.264794 GGAACCGTGCATCCTCGT 59.735 61.111 0.00 0.00 32.75 4.18
6880 7864 2.579201 AGGAACCGTGCATCCTCG 59.421 61.111 0.46 0.00 42.44 4.63
6883 7867 3.195698 GCGAGGAACCGTGCATCC 61.196 66.667 0.00 0.00 35.88 3.51
6884 7868 3.195698 GGCGAGGAACCGTGCATC 61.196 66.667 11.11 0.00 0.00 3.91
6891 7875 3.310860 ATGGACACGGCGAGGAACC 62.311 63.158 16.62 11.94 0.00 3.62
6892 7876 2.100631 CATGGACACGGCGAGGAAC 61.101 63.158 16.62 0.57 0.00 3.62
6893 7877 2.264480 CATGGACACGGCGAGGAA 59.736 61.111 16.62 0.00 0.00 3.36
6894 7878 3.770040 CCATGGACACGGCGAGGA 61.770 66.667 16.62 0.00 0.00 3.71
6895 7879 4.082523 ACCATGGACACGGCGAGG 62.083 66.667 21.47 7.98 0.00 4.63
6896 7880 2.779951 TTCACCATGGACACGGCGAG 62.780 60.000 21.47 8.85 0.00 5.03
6897 7881 2.873525 TTCACCATGGACACGGCGA 61.874 57.895 21.47 0.00 0.00 5.54
6898 7882 2.358125 TTCACCATGGACACGGCG 60.358 61.111 21.47 4.80 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.