Multiple sequence alignment - TraesCS6D01G133000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G133000 chr6D 100.000 3787 0 0 1 3787 100569780 100565994 0.000000e+00 6994.0
1 TraesCS6D01G133000 chr6D 84.590 915 123 5 1000 1899 101212213 101213124 0.000000e+00 893.0
2 TraesCS6D01G133000 chr6D 84.490 922 117 13 1000 1899 101202198 101203115 0.000000e+00 887.0
3 TraesCS6D01G133000 chr6D 83.825 779 121 4 1000 1777 25440235 25439461 0.000000e+00 736.0
4 TraesCS6D01G133000 chr6D 97.442 430 9 2 1 429 216837124 216837552 0.000000e+00 732.0
5 TraesCS6D01G133000 chr6A 91.374 2736 151 26 430 3128 120130751 120128064 0.000000e+00 3666.0
6 TraesCS6D01G133000 chr6A 86.317 782 104 2 1000 1781 121871008 121871786 0.000000e+00 848.0
7 TraesCS6D01G133000 chr6A 83.513 928 121 12 1000 1899 121659037 121659960 0.000000e+00 837.0
8 TraesCS6D01G133000 chr6A 95.200 250 11 1 181 429 575242682 575242931 9.860000e-106 394.0
9 TraesCS6D01G133000 chr6A 75.110 908 175 35 1021 1888 203521395 203522291 9.930000e-101 377.0
10 TraesCS6D01G133000 chr6B 92.547 2187 117 16 741 2888 184725928 184723749 0.000000e+00 3094.0
11 TraesCS6D01G133000 chr6B 91.407 1443 99 11 1463 2888 184706520 184705086 0.000000e+00 1954.0
12 TraesCS6D01G133000 chr6B 91.143 1400 99 12 1506 2888 184701405 184700014 0.000000e+00 1875.0
13 TraesCS6D01G133000 chr6B 90.857 1400 103 11 1506 2888 184699004 184697613 0.000000e+00 1853.0
14 TraesCS6D01G133000 chr6B 90.643 1400 106 11 1506 2888 184704097 184702706 0.000000e+00 1836.0
15 TraesCS6D01G133000 chr6B 83.857 923 121 12 1000 1899 185100023 185100940 0.000000e+00 854.0
16 TraesCS6D01G133000 chr6B 83.442 924 125 13 1000 1899 185110530 185111449 0.000000e+00 833.0
17 TraesCS6D01G133000 chr6B 77.830 848 115 34 2978 3776 184723711 184722888 1.240000e-124 457.0
18 TraesCS6D01G133000 chr6B 94.891 137 7 0 430 566 184726065 184725929 8.240000e-52 215.0
19 TraesCS6D01G133000 chr6B 90.164 61 6 0 3191 3251 671216589 671216529 3.140000e-11 80.5
20 TraesCS6D01G133000 chr3D 96.279 430 13 2 1 429 241044009 241043582 0.000000e+00 702.0
21 TraesCS6D01G133000 chr7D 96.047 430 13 2 1 429 255423179 255423605 0.000000e+00 697.0
22 TraesCS6D01G133000 chr7D 79.968 634 125 2 2164 2796 17427533 17428165 2.060000e-127 466.0
23 TraesCS6D01G133000 chr2D 94.884 430 9 3 1 429 185368596 185369013 0.000000e+00 660.0
24 TraesCS6D01G133000 chr2D 95.181 249 10 1 181 429 166314077 166314323 3.550000e-105 392.0
25 TraesCS6D01G133000 chr2D 93.436 259 12 4 181 439 629186920 629186667 2.760000e-101 379.0
26 TraesCS6D01G133000 chr2D 98.864 176 1 1 1 175 440767694 440767869 2.840000e-81 313.0
27 TraesCS6D01G133000 chr2D 86.538 52 6 1 3694 3745 133769561 133769511 5.280000e-04 56.5
28 TraesCS6D01G133000 chr7A 80.915 634 119 2 2164 2796 16730806 16731438 2.030000e-137 499.0
29 TraesCS6D01G133000 chr7A 94.048 252 12 2 181 431 708315328 708315577 2.760000e-101 379.0
30 TraesCS6D01G133000 chr1A 79.495 634 128 2 2164 2796 431977557 431976925 2.070000e-122 449.0
31 TraesCS6D01G133000 chr2B 75.495 910 178 31 1002 1872 103960681 103961584 1.640000e-108 403.0
32 TraesCS6D01G133000 chr2B 75.165 910 181 32 1002 1872 103923357 103924260 1.650000e-103 387.0
33 TraesCS6D01G133000 chr2B 96.591 176 5 1 1 175 518740417 518740592 1.330000e-74 291.0
34 TraesCS6D01G133000 chr2B 100.000 28 0 0 3694 3721 47166913 47166886 7.000000e-03 52.8
35 TraesCS6D01G133000 chr5D 94.378 249 11 2 181 429 3523874 3524119 2.760000e-101 379.0
36 TraesCS6D01G133000 chr2A 96.023 176 6 1 1 175 584511431 584511606 6.190000e-73 285.0
37 TraesCS6D01G133000 chr2A 86.000 50 6 1 3694 3743 141506474 141506426 7.000000e-03 52.8
38 TraesCS6D01G133000 chr4D 85.714 161 17 4 3194 3350 300279392 300279550 8.420000e-37 165.0
39 TraesCS6D01G133000 chrUn 82.443 131 23 0 3187 3317 234992988 234992858 8.600000e-22 115.0
40 TraesCS6D01G133000 chrUn 81.250 128 24 0 3178 3305 321566971 321567098 1.860000e-18 104.0
41 TraesCS6D01G133000 chr7B 82.812 128 22 0 3178 3305 690518506 690518633 8.600000e-22 115.0
42 TraesCS6D01G133000 chr7B 82.812 128 22 0 3178 3305 690541169 690541296 8.600000e-22 115.0
43 TraesCS6D01G133000 chr7B 81.250 128 24 0 3178 3305 690569052 690569179 1.860000e-18 104.0
44 TraesCS6D01G133000 chr3B 82.456 114 13 5 3188 3301 564311916 564312022 4.030000e-15 93.5
45 TraesCS6D01G133000 chr1B 86.885 61 8 0 3189 3249 297339339 297339399 6.790000e-08 69.4
46 TraesCS6D01G133000 chr1D 100.000 30 0 0 3274 3303 452740922 452740951 5.280000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G133000 chr6D 100565994 100569780 3786 True 6994.000000 6994 100.000000 1 3787 1 chr6D.!!$R2 3786
1 TraesCS6D01G133000 chr6D 101212213 101213124 911 False 893.000000 893 84.590000 1000 1899 1 chr6D.!!$F2 899
2 TraesCS6D01G133000 chr6D 101202198 101203115 917 False 887.000000 887 84.490000 1000 1899 1 chr6D.!!$F1 899
3 TraesCS6D01G133000 chr6D 25439461 25440235 774 True 736.000000 736 83.825000 1000 1777 1 chr6D.!!$R1 777
4 TraesCS6D01G133000 chr6A 120128064 120130751 2687 True 3666.000000 3666 91.374000 430 3128 1 chr6A.!!$R1 2698
5 TraesCS6D01G133000 chr6A 121871008 121871786 778 False 848.000000 848 86.317000 1000 1781 1 chr6A.!!$F2 781
6 TraesCS6D01G133000 chr6A 121659037 121659960 923 False 837.000000 837 83.513000 1000 1899 1 chr6A.!!$F1 899
7 TraesCS6D01G133000 chr6A 203521395 203522291 896 False 377.000000 377 75.110000 1021 1888 1 chr6A.!!$F3 867
8 TraesCS6D01G133000 chr6B 184697613 184706520 8907 True 1879.500000 1954 91.012500 1463 2888 4 chr6B.!!$R2 1425
9 TraesCS6D01G133000 chr6B 184722888 184726065 3177 True 1255.333333 3094 88.422667 430 3776 3 chr6B.!!$R3 3346
10 TraesCS6D01G133000 chr6B 185100023 185100940 917 False 854.000000 854 83.857000 1000 1899 1 chr6B.!!$F1 899
11 TraesCS6D01G133000 chr6B 185110530 185111449 919 False 833.000000 833 83.442000 1000 1899 1 chr6B.!!$F2 899
12 TraesCS6D01G133000 chr7D 17427533 17428165 632 False 466.000000 466 79.968000 2164 2796 1 chr7D.!!$F1 632
13 TraesCS6D01G133000 chr7A 16730806 16731438 632 False 499.000000 499 80.915000 2164 2796 1 chr7A.!!$F1 632
14 TraesCS6D01G133000 chr1A 431976925 431977557 632 True 449.000000 449 79.495000 2164 2796 1 chr1A.!!$R1 632
15 TraesCS6D01G133000 chr2B 103960681 103961584 903 False 403.000000 403 75.495000 1002 1872 1 chr2B.!!$F2 870
16 TraesCS6D01G133000 chr2B 103923357 103924260 903 False 387.000000 387 75.165000 1002 1872 1 chr2B.!!$F1 870

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
996 1007 0.027979 CACACAAACTCACACTGCCG 59.972 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2900 10460 0.031857 CTTGCAATGGTCAACCGCAA 59.968 50.0 0.0 11.02 37.48 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 2.029073 CGGCCTCGGCATCGTTAT 59.971 61.111 10.51 0.00 44.11 1.89
50 51 2.310233 CGGCCTCGGCATCGTTATG 61.310 63.158 10.51 0.00 44.11 1.90
58 59 3.333414 CATCGTTATGCTGCCGGG 58.667 61.111 2.18 0.00 0.00 5.73
59 60 2.111043 ATCGTTATGCTGCCGGGG 59.889 61.111 2.18 0.00 0.00 5.73
60 61 2.742116 ATCGTTATGCTGCCGGGGT 61.742 57.895 2.18 0.00 0.00 4.95
61 62 2.660258 ATCGTTATGCTGCCGGGGTC 62.660 60.000 2.18 0.00 0.00 4.46
62 63 2.590092 GTTATGCTGCCGGGGTCT 59.410 61.111 2.18 0.00 0.00 3.85
63 64 1.077716 GTTATGCTGCCGGGGTCTT 60.078 57.895 2.18 0.00 0.00 3.01
64 65 1.095807 GTTATGCTGCCGGGGTCTTC 61.096 60.000 2.18 0.00 0.00 2.87
65 66 2.587322 TTATGCTGCCGGGGTCTTCG 62.587 60.000 2.18 0.00 0.00 3.79
92 93 4.140599 CTTCGCTGCTCCTCGCCT 62.141 66.667 0.00 0.00 38.05 5.52
93 94 3.655810 CTTCGCTGCTCCTCGCCTT 62.656 63.158 0.00 0.00 38.05 4.35
94 95 3.649277 TTCGCTGCTCCTCGCCTTC 62.649 63.158 0.00 0.00 38.05 3.46
95 96 4.140599 CGCTGCTCCTCGCCTTCT 62.141 66.667 0.00 0.00 38.05 2.85
96 97 2.267324 GCTGCTCCTCGCCTTCTT 59.733 61.111 0.00 0.00 38.05 2.52
97 98 1.813337 GCTGCTCCTCGCCTTCTTC 60.813 63.158 0.00 0.00 38.05 2.87
98 99 1.896694 CTGCTCCTCGCCTTCTTCT 59.103 57.895 0.00 0.00 38.05 2.85
99 100 0.248843 CTGCTCCTCGCCTTCTTCTT 59.751 55.000 0.00 0.00 38.05 2.52
100 101 0.247736 TGCTCCTCGCCTTCTTCTTC 59.752 55.000 0.00 0.00 38.05 2.87
101 102 0.534873 GCTCCTCGCCTTCTTCTTCT 59.465 55.000 0.00 0.00 0.00 2.85
102 103 1.738700 GCTCCTCGCCTTCTTCTTCTG 60.739 57.143 0.00 0.00 0.00 3.02
103 104 0.898320 TCCTCGCCTTCTTCTTCTGG 59.102 55.000 0.00 0.00 0.00 3.86
104 105 0.742635 CCTCGCCTTCTTCTTCTGGC 60.743 60.000 0.00 0.00 41.76 4.85
107 108 3.467776 GCCTTCTTCTTCTGGCGAT 57.532 52.632 0.00 0.00 35.79 4.58
108 109 1.012841 GCCTTCTTCTTCTGGCGATG 58.987 55.000 0.00 0.00 35.79 3.84
109 110 1.012841 CCTTCTTCTTCTGGCGATGC 58.987 55.000 0.00 0.00 0.00 3.91
110 111 1.676916 CCTTCTTCTTCTGGCGATGCA 60.677 52.381 0.00 0.00 0.00 3.96
111 112 1.396301 CTTCTTCTTCTGGCGATGCAC 59.604 52.381 0.00 0.00 0.00 4.57
112 113 0.391661 TCTTCTTCTGGCGATGCACC 60.392 55.000 0.00 0.00 0.00 5.01
113 114 1.699656 CTTCTTCTGGCGATGCACCG 61.700 60.000 0.00 0.00 0.00 4.94
114 115 3.197790 CTTCTGGCGATGCACCGG 61.198 66.667 0.82 0.00 34.63 5.28
115 116 4.776322 TTCTGGCGATGCACCGGG 62.776 66.667 0.82 0.00 34.06 5.73
117 118 4.776322 CTGGCGATGCACCGGGAA 62.776 66.667 0.82 0.00 0.00 3.97
118 119 4.776322 TGGCGATGCACCGGGAAG 62.776 66.667 0.82 0.00 0.00 3.46
122 123 4.424711 GATGCACCGGGAAGGGCA 62.425 66.667 6.32 7.98 46.96 5.36
123 124 3.936772 GATGCACCGGGAAGGGCAA 62.937 63.158 6.32 0.00 45.01 4.52
124 125 3.944250 ATGCACCGGGAAGGGCAAG 62.944 63.158 6.32 0.00 45.01 4.01
164 165 4.856607 GCGGAGGAAGCGAGTCGG 62.857 72.222 15.52 0.00 0.00 4.79
165 166 3.132139 CGGAGGAAGCGAGTCGGA 61.132 66.667 15.52 0.00 0.00 4.55
166 167 2.802106 GGAGGAAGCGAGTCGGAG 59.198 66.667 15.52 0.00 0.00 4.63
167 168 2.776913 GGAGGAAGCGAGTCGGAGG 61.777 68.421 15.52 0.00 0.00 4.30
168 169 2.035940 AGGAAGCGAGTCGGAGGT 59.964 61.111 15.52 0.00 0.00 3.85
169 170 1.995646 GAGGAAGCGAGTCGGAGGTC 61.996 65.000 15.52 0.00 0.00 3.85
170 171 2.341101 GGAAGCGAGTCGGAGGTCA 61.341 63.158 15.52 0.00 0.00 4.02
171 172 1.153997 GAAGCGAGTCGGAGGTCAC 60.154 63.158 15.52 0.00 0.00 3.67
172 173 1.587933 GAAGCGAGTCGGAGGTCACT 61.588 60.000 15.52 0.00 0.00 3.41
173 174 1.867919 AAGCGAGTCGGAGGTCACTG 61.868 60.000 15.52 0.00 0.00 3.66
174 175 2.179517 CGAGTCGGAGGTCACTGC 59.820 66.667 4.10 0.00 0.00 4.40
182 183 2.211353 GGAGGTCACTGCGACTTATC 57.789 55.000 0.00 0.00 44.70 1.75
183 184 1.202428 GGAGGTCACTGCGACTTATCC 60.202 57.143 0.00 0.00 44.70 2.59
184 185 1.476891 GAGGTCACTGCGACTTATCCA 59.523 52.381 0.00 0.00 44.70 3.41
185 186 1.478510 AGGTCACTGCGACTTATCCAG 59.521 52.381 0.00 0.00 44.70 3.86
186 187 1.476891 GGTCACTGCGACTTATCCAGA 59.523 52.381 0.00 0.00 44.70 3.86
187 188 2.101582 GGTCACTGCGACTTATCCAGAT 59.898 50.000 0.00 0.00 44.70 2.90
188 189 3.376540 GTCACTGCGACTTATCCAGATC 58.623 50.000 0.00 0.00 41.81 2.75
189 190 2.033424 TCACTGCGACTTATCCAGATCG 59.967 50.000 0.00 0.00 37.63 3.69
190 191 1.338337 ACTGCGACTTATCCAGATCGG 59.662 52.381 0.00 0.00 35.15 4.18
191 192 0.673985 TGCGACTTATCCAGATCGGG 59.326 55.000 5.39 5.39 35.15 5.14
192 193 0.667792 GCGACTTATCCAGATCGGGC 60.668 60.000 7.07 0.00 35.15 6.13
193 194 0.387367 CGACTTATCCAGATCGGGCG 60.387 60.000 7.07 0.00 34.36 6.13
194 195 0.667792 GACTTATCCAGATCGGGCGC 60.668 60.000 7.07 0.00 34.36 6.53
195 196 1.374758 CTTATCCAGATCGGGCGCC 60.375 63.158 21.18 21.18 34.36 6.53
221 222 1.079750 GTGAGGACGAAGGAGGTGC 60.080 63.158 0.00 0.00 0.00 5.01
222 223 2.182030 GAGGACGAAGGAGGTGCG 59.818 66.667 0.00 0.00 0.00 5.34
223 224 3.358076 GAGGACGAAGGAGGTGCGG 62.358 68.421 0.00 0.00 0.00 5.69
224 225 4.452733 GGACGAAGGAGGTGCGGG 62.453 72.222 0.00 0.00 0.00 6.13
225 226 4.452733 GACGAAGGAGGTGCGGGG 62.453 72.222 0.00 0.00 0.00 5.73
258 259 3.871775 AAAAATGCCACGTCAGCAG 57.128 47.368 14.50 0.00 44.90 4.24
259 260 0.318955 AAAAATGCCACGTCAGCAGC 60.319 50.000 14.50 0.67 44.90 5.25
260 261 1.174712 AAAATGCCACGTCAGCAGCT 61.175 50.000 14.50 0.00 44.90 4.24
261 262 1.859427 AAATGCCACGTCAGCAGCTG 61.859 55.000 17.10 17.10 44.90 4.24
262 263 2.736579 AATGCCACGTCAGCAGCTGA 62.737 55.000 21.85 21.85 44.90 4.26
269 270 4.383861 TCAGCAGCTGACAGGCGG 62.384 66.667 21.85 1.77 35.39 6.13
286 287 3.161450 GGCCCTGCCGGTCAGATA 61.161 66.667 22.49 0.00 45.72 1.98
287 288 2.109181 GCCCTGCCGGTCAGATAC 59.891 66.667 22.49 10.65 45.72 2.24
288 289 2.731571 GCCCTGCCGGTCAGATACA 61.732 63.158 22.49 1.81 45.72 2.29
289 290 1.144057 CCCTGCCGGTCAGATACAC 59.856 63.158 22.49 0.00 45.72 2.90
290 291 1.330655 CCCTGCCGGTCAGATACACT 61.331 60.000 22.49 0.00 45.72 3.55
291 292 0.179100 CCTGCCGGTCAGATACACTG 60.179 60.000 22.49 5.03 45.72 3.66
292 293 0.532573 CTGCCGGTCAGATACACTGT 59.467 55.000 17.75 0.00 45.72 3.55
293 294 0.530744 TGCCGGTCAGATACACTGTC 59.469 55.000 1.90 0.00 45.86 3.51
294 295 0.530744 GCCGGTCAGATACACTGTCA 59.469 55.000 1.90 0.00 45.86 3.58
295 296 1.067142 GCCGGTCAGATACACTGTCAA 60.067 52.381 1.90 0.00 45.86 3.18
296 297 2.418746 GCCGGTCAGATACACTGTCAAT 60.419 50.000 1.90 0.00 45.86 2.57
297 298 3.181479 GCCGGTCAGATACACTGTCAATA 60.181 47.826 1.90 0.00 45.86 1.90
298 299 4.360563 CCGGTCAGATACACTGTCAATAC 58.639 47.826 0.00 0.00 45.86 1.89
299 300 4.035684 CGGTCAGATACACTGTCAATACG 58.964 47.826 0.00 0.00 45.86 3.06
300 301 3.797256 GGTCAGATACACTGTCAATACGC 59.203 47.826 0.00 0.00 45.86 4.42
301 302 3.482472 GTCAGATACACTGTCAATACGCG 59.518 47.826 3.53 3.53 45.86 6.01
302 303 3.128068 TCAGATACACTGTCAATACGCGT 59.872 43.478 19.17 19.17 45.86 6.01
303 304 3.857665 CAGATACACTGTCAATACGCGTT 59.142 43.478 20.78 1.87 41.30 4.84
304 305 4.326278 CAGATACACTGTCAATACGCGTTT 59.674 41.667 20.78 6.76 41.30 3.60
305 306 5.513849 CAGATACACTGTCAATACGCGTTTA 59.486 40.000 20.78 0.00 41.30 2.01
306 307 6.198403 CAGATACACTGTCAATACGCGTTTAT 59.802 38.462 20.78 1.77 41.30 1.40
307 308 7.377662 CAGATACACTGTCAATACGCGTTTATA 59.622 37.037 20.78 0.00 41.30 0.98
308 309 5.691508 ACACTGTCAATACGCGTTTATAC 57.308 39.130 20.78 12.22 0.00 1.47
322 323 5.878261 CGTTTATACGCGATTTAGACCTT 57.122 39.130 15.93 0.00 41.41 3.50
323 324 6.264909 CGTTTATACGCGATTTAGACCTTT 57.735 37.500 15.93 0.00 41.41 3.11
324 325 6.699063 CGTTTATACGCGATTTAGACCTTTT 58.301 36.000 15.93 0.00 41.41 2.27
325 326 7.175410 CGTTTATACGCGATTTAGACCTTTTT 58.825 34.615 15.93 0.00 41.41 1.94
326 327 7.161418 CGTTTATACGCGATTTAGACCTTTTTG 59.839 37.037 15.93 0.00 41.41 2.44
327 328 7.599630 TTATACGCGATTTAGACCTTTTTGT 57.400 32.000 15.93 0.00 0.00 2.83
328 329 8.700722 TTATACGCGATTTAGACCTTTTTGTA 57.299 30.769 15.93 0.00 0.00 2.41
329 330 5.927954 ACGCGATTTAGACCTTTTTGTAA 57.072 34.783 15.93 0.00 0.00 2.41
330 331 5.682869 ACGCGATTTAGACCTTTTTGTAAC 58.317 37.500 15.93 0.00 0.00 2.50
331 332 4.779523 CGCGATTTAGACCTTTTTGTAACG 59.220 41.667 0.00 0.00 0.00 3.18
332 333 5.613142 CGCGATTTAGACCTTTTTGTAACGT 60.613 40.000 0.00 0.00 0.00 3.99
333 334 5.787062 GCGATTTAGACCTTTTTGTAACGTC 59.213 40.000 0.00 0.00 0.00 4.34
334 335 6.347160 GCGATTTAGACCTTTTTGTAACGTCT 60.347 38.462 0.00 0.00 37.54 4.18
335 336 7.148755 GCGATTTAGACCTTTTTGTAACGTCTA 60.149 37.037 0.00 0.00 35.50 2.59
336 337 8.371053 CGATTTAGACCTTTTTGTAACGTCTAG 58.629 37.037 0.00 0.00 37.36 2.43
337 338 7.412137 TTTAGACCTTTTTGTAACGTCTAGC 57.588 36.000 0.00 0.00 37.36 3.42
338 339 4.313282 AGACCTTTTTGTAACGTCTAGCC 58.687 43.478 0.00 0.00 32.15 3.93
339 340 3.405831 ACCTTTTTGTAACGTCTAGCCC 58.594 45.455 0.00 0.00 0.00 5.19
340 341 2.745821 CCTTTTTGTAACGTCTAGCCCC 59.254 50.000 0.00 0.00 0.00 5.80
341 342 3.404899 CTTTTTGTAACGTCTAGCCCCA 58.595 45.455 0.00 0.00 0.00 4.96
342 343 2.754946 TTTGTAACGTCTAGCCCCAG 57.245 50.000 0.00 0.00 0.00 4.45
343 344 1.927487 TTGTAACGTCTAGCCCCAGA 58.073 50.000 0.00 0.00 0.00 3.86
344 345 1.180029 TGTAACGTCTAGCCCCAGAC 58.820 55.000 0.00 1.55 41.33 3.51
345 346 1.272313 TGTAACGTCTAGCCCCAGACT 60.272 52.381 8.56 0.00 42.36 3.24
346 347 1.823610 GTAACGTCTAGCCCCAGACTT 59.176 52.381 8.56 5.46 42.36 3.01
347 348 0.608640 AACGTCTAGCCCCAGACTTG 59.391 55.000 8.56 0.00 42.36 3.16
348 349 1.258445 ACGTCTAGCCCCAGACTTGG 61.258 60.000 8.56 0.00 42.36 3.61
349 350 1.258445 CGTCTAGCCCCAGACTTGGT 61.258 60.000 8.56 0.00 43.40 3.67
350 351 1.861982 GTCTAGCCCCAGACTTGGTA 58.138 55.000 4.00 0.00 43.40 3.25
351 352 1.481363 GTCTAGCCCCAGACTTGGTAC 59.519 57.143 4.00 0.00 43.40 3.34
352 353 1.361543 TCTAGCCCCAGACTTGGTACT 59.638 52.381 0.00 0.00 43.40 2.73
353 354 1.482593 CTAGCCCCAGACTTGGTACTG 59.517 57.143 0.00 0.00 43.40 2.74
354 355 0.178903 AGCCCCAGACTTGGTACTGA 60.179 55.000 0.00 0.00 43.40 3.41
355 356 0.036294 GCCCCAGACTTGGTACTGAC 60.036 60.000 0.00 0.00 43.40 3.51
356 357 0.246635 CCCCAGACTTGGTACTGACG 59.753 60.000 0.00 0.00 43.40 4.35
357 358 0.966920 CCCAGACTTGGTACTGACGT 59.033 55.000 0.00 0.00 43.40 4.34
358 359 1.336887 CCCAGACTTGGTACTGACGTG 60.337 57.143 0.00 0.00 43.40 4.49
359 360 1.340248 CCAGACTTGGTACTGACGTGT 59.660 52.381 0.00 0.00 39.79 4.49
360 361 2.555325 CCAGACTTGGTACTGACGTGTA 59.445 50.000 0.00 0.00 39.79 2.90
361 362 3.005050 CCAGACTTGGTACTGACGTGTAA 59.995 47.826 0.00 0.00 39.79 2.41
362 363 4.500205 CCAGACTTGGTACTGACGTGTAAA 60.500 45.833 0.00 0.00 39.79 2.01
363 364 5.045215 CAGACTTGGTACTGACGTGTAAAA 58.955 41.667 0.00 0.00 36.38 1.52
364 365 5.521010 CAGACTTGGTACTGACGTGTAAAAA 59.479 40.000 0.00 0.00 36.38 1.94
365 366 6.202188 CAGACTTGGTACTGACGTGTAAAAAT 59.798 38.462 0.00 0.00 36.38 1.82
366 367 6.764560 AGACTTGGTACTGACGTGTAAAAATT 59.235 34.615 0.00 0.00 0.00 1.82
367 368 7.927629 AGACTTGGTACTGACGTGTAAAAATTA 59.072 33.333 0.00 0.00 0.00 1.40
368 369 7.854534 ACTTGGTACTGACGTGTAAAAATTAC 58.145 34.615 0.00 0.00 0.00 1.89
369 370 6.783892 TGGTACTGACGTGTAAAAATTACC 57.216 37.500 0.00 0.00 0.00 2.85
370 371 6.286758 TGGTACTGACGTGTAAAAATTACCA 58.713 36.000 0.00 0.00 35.26 3.25
371 372 6.765036 TGGTACTGACGTGTAAAAATTACCAA 59.235 34.615 0.00 0.00 34.82 3.67
372 373 7.281774 TGGTACTGACGTGTAAAAATTACCAAA 59.718 33.333 0.00 0.00 34.82 3.28
373 374 7.587392 GGTACTGACGTGTAAAAATTACCAAAC 59.413 37.037 0.00 0.00 0.00 2.93
374 375 7.324354 ACTGACGTGTAAAAATTACCAAACT 57.676 32.000 0.00 0.00 0.00 2.66
375 376 7.764331 ACTGACGTGTAAAAATTACCAAACTT 58.236 30.769 0.00 0.00 0.00 2.66
376 377 7.698970 ACTGACGTGTAAAAATTACCAAACTTG 59.301 33.333 0.00 0.00 0.00 3.16
377 378 7.759465 TGACGTGTAAAAATTACCAAACTTGA 58.241 30.769 0.00 0.00 0.00 3.02
378 379 8.407064 TGACGTGTAAAAATTACCAAACTTGAT 58.593 29.630 0.00 0.00 0.00 2.57
379 380 9.881529 GACGTGTAAAAATTACCAAACTTGATA 57.118 29.630 0.00 0.00 0.00 2.15
380 381 9.667989 ACGTGTAAAAATTACCAAACTTGATAC 57.332 29.630 0.00 0.00 0.00 2.24
381 382 9.120422 CGTGTAAAAATTACCAAACTTGATACC 57.880 33.333 0.00 0.00 0.00 2.73
382 383 9.968870 GTGTAAAAATTACCAAACTTGATACCA 57.031 29.630 0.00 0.00 0.00 3.25
387 388 9.927668 AAAATTACCAAACTTGATACCAATCTG 57.072 29.630 0.00 0.00 32.93 2.90
388 389 8.650143 AATTACCAAACTTGATACCAATCTGT 57.350 30.769 0.00 0.00 32.93 3.41
389 390 8.650143 ATTACCAAACTTGATACCAATCTGTT 57.350 30.769 0.00 0.00 33.86 3.16
390 391 6.976934 ACCAAACTTGATACCAATCTGTTT 57.023 33.333 0.00 0.00 38.62 2.83
391 392 6.981722 ACCAAACTTGATACCAATCTGTTTC 58.018 36.000 0.00 0.00 37.37 2.78
392 393 6.015434 ACCAAACTTGATACCAATCTGTTTCC 60.015 38.462 0.00 0.00 37.37 3.13
393 394 6.015519 CCAAACTTGATACCAATCTGTTTCCA 60.016 38.462 0.00 0.00 37.37 3.53
394 395 7.432869 CAAACTTGATACCAATCTGTTTCCAA 58.567 34.615 0.00 0.00 37.37 3.53
395 396 7.781324 AACTTGATACCAATCTGTTTCCAAT 57.219 32.000 0.00 0.00 30.78 3.16
396 397 7.161773 ACTTGATACCAATCTGTTTCCAATG 57.838 36.000 0.00 0.00 32.93 2.82
397 398 5.581126 TGATACCAATCTGTTTCCAATGC 57.419 39.130 0.00 0.00 32.93 3.56
398 399 4.402155 TGATACCAATCTGTTTCCAATGCC 59.598 41.667 0.00 0.00 32.93 4.40
399 400 2.607499 ACCAATCTGTTTCCAATGCCA 58.393 42.857 0.00 0.00 0.00 4.92
400 401 2.299867 ACCAATCTGTTTCCAATGCCAC 59.700 45.455 0.00 0.00 0.00 5.01
401 402 2.299582 CCAATCTGTTTCCAATGCCACA 59.700 45.455 0.00 0.00 0.00 4.17
402 403 3.244146 CCAATCTGTTTCCAATGCCACAA 60.244 43.478 0.00 0.00 0.00 3.33
403 404 4.563993 CCAATCTGTTTCCAATGCCACAAT 60.564 41.667 0.00 0.00 0.00 2.71
404 405 4.895668 ATCTGTTTCCAATGCCACAATT 57.104 36.364 0.00 0.00 0.00 2.32
405 406 5.999205 ATCTGTTTCCAATGCCACAATTA 57.001 34.783 0.00 0.00 0.00 1.40
406 407 5.999205 TCTGTTTCCAATGCCACAATTAT 57.001 34.783 0.00 0.00 0.00 1.28
407 408 5.722263 TCTGTTTCCAATGCCACAATTATG 58.278 37.500 0.00 0.00 0.00 1.90
408 409 5.479724 TCTGTTTCCAATGCCACAATTATGA 59.520 36.000 0.00 0.00 0.00 2.15
409 410 6.154877 TCTGTTTCCAATGCCACAATTATGAT 59.845 34.615 0.00 0.00 0.00 2.45
410 411 7.341512 TCTGTTTCCAATGCCACAATTATGATA 59.658 33.333 0.00 0.00 0.00 2.15
411 412 7.264221 TGTTTCCAATGCCACAATTATGATAC 58.736 34.615 0.00 0.00 0.00 2.24
412 413 7.123997 TGTTTCCAATGCCACAATTATGATACT 59.876 33.333 0.00 0.00 0.00 2.12
413 414 7.658525 TTCCAATGCCACAATTATGATACTT 57.341 32.000 0.00 0.00 0.00 2.24
414 415 7.041635 TCCAATGCCACAATTATGATACTTG 57.958 36.000 1.54 1.54 0.00 3.16
415 416 6.606796 TCCAATGCCACAATTATGATACTTGT 59.393 34.615 2.75 2.75 33.55 3.16
416 417 6.698329 CCAATGCCACAATTATGATACTTGTG 59.302 38.462 21.71 21.71 45.84 3.33
417 418 7.259882 CAATGCCACAATTATGATACTTGTGT 58.740 34.615 24.60 11.14 45.17 3.72
418 419 6.193514 TGCCACAATTATGATACTTGTGTG 57.806 37.500 24.60 19.07 45.17 3.82
419 420 5.036737 GCCACAATTATGATACTTGTGTGC 58.963 41.667 24.60 22.69 45.17 4.57
420 421 5.392919 GCCACAATTATGATACTTGTGTGCA 60.393 40.000 25.52 0.00 45.17 4.57
421 422 6.619744 CCACAATTATGATACTTGTGTGCAA 58.380 36.000 24.60 0.00 45.17 4.08
422 423 7.259882 CCACAATTATGATACTTGTGTGCAAT 58.740 34.615 24.60 0.00 45.17 3.56
423 424 7.760794 CCACAATTATGATACTTGTGTGCAATT 59.239 33.333 24.60 0.00 45.17 2.32
424 425 9.142515 CACAATTATGATACTTGTGTGCAATTT 57.857 29.630 20.86 0.00 42.90 1.82
555 556 0.865111 TGAGGTGTCAATCGCAAACG 59.135 50.000 0.00 0.00 42.01 3.60
571 572 3.751698 GCAAACGGGACTGTCTAAGAATT 59.248 43.478 7.85 0.00 0.00 2.17
588 589 5.449107 AGAATTACAGGATGCATGCAATC 57.551 39.130 26.68 20.64 42.53 2.67
590 591 4.848562 ATTACAGGATGCATGCAATCAG 57.151 40.909 26.68 17.84 42.53 2.90
591 592 0.744874 ACAGGATGCATGCAATCAGC 59.255 50.000 26.68 11.47 42.53 4.26
604 605 0.969149 AATCAGCTGTCACCAGTCGA 59.031 50.000 14.67 0.00 41.02 4.20
605 606 1.189752 ATCAGCTGTCACCAGTCGAT 58.810 50.000 14.67 0.00 41.02 3.59
625 626 2.894879 TGTGTGTGACGTGGCAGC 60.895 61.111 0.00 0.00 0.00 5.25
628 629 1.887242 TGTGTGACGTGGCAGCTTC 60.887 57.895 0.00 0.00 0.00 3.86
629 630 1.595382 GTGTGACGTGGCAGCTTCT 60.595 57.895 0.00 0.00 0.00 2.85
630 631 1.300931 TGTGACGTGGCAGCTTCTC 60.301 57.895 0.00 0.00 0.00 2.87
631 632 1.300931 GTGACGTGGCAGCTTCTCA 60.301 57.895 0.00 0.00 0.00 3.27
632 633 0.880278 GTGACGTGGCAGCTTCTCAA 60.880 55.000 0.00 0.00 0.00 3.02
633 634 0.179059 TGACGTGGCAGCTTCTCAAA 60.179 50.000 0.00 0.00 0.00 2.69
634 635 0.944386 GACGTGGCAGCTTCTCAAAA 59.056 50.000 0.00 0.00 0.00 2.44
646 647 5.404366 CAGCTTCTCAAAATTTCATGTGTGG 59.596 40.000 0.00 0.00 0.00 4.17
652 653 3.947910 AAATTTCATGTGTGGGCTCTG 57.052 42.857 0.00 0.00 0.00 3.35
656 657 2.408271 TCATGTGTGGGCTCTGAATC 57.592 50.000 0.00 0.00 0.00 2.52
687 688 4.402474 TGATCAAGCTGGAGAATCGTTCTA 59.598 41.667 0.00 0.00 40.87 2.10
728 729 6.600427 TCAGTCACGAATACTTACAGACCATA 59.400 38.462 0.00 0.00 0.00 2.74
767 771 5.003160 AGCTGTGTCACTGCATACAAAATA 58.997 37.500 29.49 0.00 44.20 1.40
831 840 2.472059 CCGATGCCCACCATGTTCG 61.472 63.158 0.00 0.00 33.29 3.95
863 872 2.722130 CTTGGACAAGCTGCGTGTGC 62.722 60.000 27.39 27.39 43.20 4.57
983 994 3.410516 CGCGCCGTGATCACACAA 61.411 61.111 24.93 0.00 46.20 3.33
996 1007 0.027979 CACACAAACTCACACTGCCG 59.972 55.000 0.00 0.00 0.00 5.69
997 1008 1.095228 ACACAAACTCACACTGCCGG 61.095 55.000 0.00 0.00 0.00 6.13
1023 1044 3.447586 TGGAGCAAGCTACTTACTACCTG 59.552 47.826 5.79 0.00 0.00 4.00
1030 1051 2.101082 GCTACTTACTACCTGTGCCTCC 59.899 54.545 0.00 0.00 0.00 4.30
1827 9360 3.258372 ACGTGCTCTTGAGGATACAGAAA 59.742 43.478 0.00 0.00 41.41 2.52
1889 9422 2.260822 AGCAAGTATCCTGGTGAGTGT 58.739 47.619 0.00 0.00 0.00 3.55
1919 9452 2.703007 CCCAGCTAGCTTCAGTTCCTAT 59.297 50.000 16.46 0.00 0.00 2.57
1920 9453 3.898123 CCCAGCTAGCTTCAGTTCCTATA 59.102 47.826 16.46 0.00 0.00 1.31
1923 9456 5.069781 CCAGCTAGCTTCAGTTCCTATACTT 59.930 44.000 16.46 0.00 0.00 2.24
1934 9467 9.948964 TTCAGTTCCTATACTTTAGGTTTAACC 57.051 33.333 5.91 5.91 38.99 2.85
1979 9521 5.978934 TCTTTTAGTTTCCACGTGACTTC 57.021 39.130 19.30 4.92 0.00 3.01
1995 9537 5.629849 CGTGACTTCGAACTCAAGATTTACT 59.370 40.000 12.86 0.00 0.00 2.24
2001 9543 7.488471 ACTTCGAACTCAAGATTTACTATTCCG 59.512 37.037 0.00 0.00 0.00 4.30
2002 9544 5.747197 TCGAACTCAAGATTTACTATTCCGC 59.253 40.000 0.00 0.00 0.00 5.54
2007 9549 6.421202 ACTCAAGATTTACTATTCCGCGATTC 59.579 38.462 8.23 0.00 0.00 2.52
2034 9576 3.374058 CGTTGAAAACTTAGGATGGCGAT 59.626 43.478 0.00 0.00 46.99 4.58
2040 9582 3.032017 ACTTAGGATGGCGATTCGATG 57.968 47.619 10.88 0.00 0.00 3.84
2041 9583 2.628178 ACTTAGGATGGCGATTCGATGA 59.372 45.455 10.88 0.00 0.00 2.92
2059 9601 0.675633 GACTTGCTGGCATGTGGTTT 59.324 50.000 16.71 0.00 35.00 3.27
2125 9667 9.490663 AATCATCGAGTTTTCAATTCGTAATTC 57.509 29.630 0.00 0.00 35.90 2.17
2130 9672 9.806203 TCGAGTTTTCAATTCGTAATTCCTATA 57.194 29.630 1.96 0.00 35.90 1.31
2131 9673 9.845305 CGAGTTTTCAATTCGTAATTCCTATAC 57.155 33.333 0.00 0.00 0.00 1.47
2161 9709 8.629158 TCCTAAATTGCACACATTGGTATTATC 58.371 33.333 0.00 0.00 0.00 1.75
2162 9710 8.632679 CCTAAATTGCACACATTGGTATTATCT 58.367 33.333 0.00 0.00 0.00 1.98
2198 9746 4.131088 GCCGGGAGTGAGACGTCC 62.131 72.222 13.01 4.42 0.00 4.79
2237 9785 0.749049 CCATGTCGGAGCTCATGAGA 59.251 55.000 27.04 11.61 40.07 3.27
2249 9797 2.866762 GCTCATGAGATACCCAAACGTC 59.133 50.000 27.04 0.00 0.00 4.34
2306 9854 2.508526 GGAGAAAAGCACATGGTGACT 58.491 47.619 0.00 0.00 35.23 3.41
2321 9869 1.277557 GTGACTGAGGATGACTTGGCT 59.722 52.381 0.00 0.00 0.00 4.75
2423 9971 4.444876 GCTATGGAGTCCTGCAAAATCCTA 60.445 45.833 11.33 4.20 33.77 2.94
2520 10068 1.340697 ACCCCGAGGAATTTAAGCCAC 60.341 52.381 0.00 0.00 36.73 5.01
2780 10328 3.371063 ATCGTCCGTGTGTCGCCT 61.371 61.111 0.00 0.00 38.35 5.52
2812 10360 4.826733 TGCACTTCAATAGTTTGTGGTCAT 59.173 37.500 0.00 0.00 33.85 3.06
2829 10377 9.913310 TTGTGGTCATAAATTCTCATATACCAA 57.087 29.630 0.00 0.00 36.33 3.67
2892 10452 8.806429 ATTACATCATCAGAAATACCACAACA 57.194 30.769 0.00 0.00 0.00 3.33
2893 10453 8.628630 TTACATCATCAGAAATACCACAACAA 57.371 30.769 0.00 0.00 0.00 2.83
2894 10454 7.707624 ACATCATCAGAAATACCACAACAAT 57.292 32.000 0.00 0.00 0.00 2.71
2895 10455 8.125978 ACATCATCAGAAATACCACAACAATT 57.874 30.769 0.00 0.00 0.00 2.32
2896 10456 8.587608 ACATCATCAGAAATACCACAACAATTT 58.412 29.630 0.00 0.00 0.00 1.82
2897 10457 9.426837 CATCATCAGAAATACCACAACAATTTT 57.573 29.630 0.00 0.00 0.00 1.82
2926 10486 4.298332 GGTTGACCATTGCAAGTTTACTG 58.702 43.478 4.94 0.00 35.64 2.74
2976 10536 2.074729 TTTGAATCACAAACCCCGGT 57.925 45.000 0.00 0.00 42.57 5.28
2983 10543 0.963355 CACAAACCCCGGTACCATGG 60.963 60.000 11.19 11.19 0.00 3.66
3004 10564 3.365164 GGCGCCGAACAAAGTGTTAATTA 60.365 43.478 12.58 0.00 41.28 1.40
3106 10668 7.984002 TGTATTTCAATTGGCATAAATGTCG 57.016 32.000 5.42 0.00 34.48 4.35
3110 10672 3.443329 TCAATTGGCATAAATGTCGCACT 59.557 39.130 5.42 0.00 34.48 4.40
3111 10673 4.082300 TCAATTGGCATAAATGTCGCACTT 60.082 37.500 5.42 0.00 34.48 3.16
3112 10674 3.485947 TTGGCATAAATGTCGCACTTC 57.514 42.857 0.00 0.00 34.48 3.01
3113 10675 2.431454 TGGCATAAATGTCGCACTTCA 58.569 42.857 0.00 0.00 34.48 3.02
3120 10682 1.662517 ATGTCGCACTTCACACACAA 58.337 45.000 0.00 0.00 0.00 3.33
3122 10684 1.807142 TGTCGCACTTCACACACAAAA 59.193 42.857 0.00 0.00 0.00 2.44
3146 10708 7.399245 AACACGGTTATAAATTATGCAACCT 57.601 32.000 13.02 2.14 37.17 3.50
3147 10709 8.508883 AACACGGTTATAAATTATGCAACCTA 57.491 30.769 13.02 0.00 37.17 3.08
3149 10711 8.564574 ACACGGTTATAAATTATGCAACCTATG 58.435 33.333 13.02 12.71 37.17 2.23
3195 10809 1.712018 CGAGACCGTCACCGATAGCA 61.712 60.000 0.40 0.00 35.63 3.49
3206 10820 4.021229 TCACCGATAGCAAGGAAGAGTAA 58.979 43.478 0.00 0.00 0.00 2.24
3214 10828 4.985538 AGCAAGGAAGAGTAAAACATGGA 58.014 39.130 0.00 0.00 0.00 3.41
3245 10859 2.851045 TTGGGTCCCAAGAAGGCC 59.149 61.111 20.15 0.00 38.75 5.19
3246 10860 2.088096 TTGGGTCCCAAGAAGGCCA 61.088 57.895 20.15 0.00 38.75 5.36
3247 10861 2.035783 GGGTCCCAAGAAGGCCAC 59.964 66.667 5.01 0.00 35.39 5.01
3248 10862 2.035783 GGTCCCAAGAAGGCCACC 59.964 66.667 5.01 0.00 35.39 4.61
3249 10863 2.840753 GGTCCCAAGAAGGCCACCA 61.841 63.158 5.01 0.00 38.26 4.17
3250 10864 1.603739 GTCCCAAGAAGGCCACCAC 60.604 63.158 5.01 0.00 35.39 4.16
3251 10865 2.283173 CCCAAGAAGGCCACCACC 60.283 66.667 5.01 0.00 35.39 4.61
3252 10866 2.520458 CCAAGAAGGCCACCACCA 59.480 61.111 5.01 0.00 0.00 4.17
3253 10867 1.903404 CCAAGAAGGCCACCACCAC 60.903 63.158 5.01 0.00 0.00 4.16
3254 10868 1.903404 CAAGAAGGCCACCACCACC 60.903 63.158 5.01 0.00 0.00 4.61
3255 10869 3.491598 AAGAAGGCCACCACCACCG 62.492 63.158 5.01 0.00 0.00 4.94
3256 10870 4.265056 GAAGGCCACCACCACCGT 62.265 66.667 5.01 0.00 0.00 4.83
3257 10871 4.265056 AAGGCCACCACCACCGTC 62.265 66.667 5.01 0.00 0.00 4.79
3259 10873 4.265056 GGCCACCACCACCGTCTT 62.265 66.667 0.00 0.00 0.00 3.01
3260 10874 2.978010 GCCACCACCACCGTCTTG 60.978 66.667 0.00 0.00 0.00 3.02
3261 10875 2.978010 CCACCACCACCGTCTTGC 60.978 66.667 0.00 0.00 0.00 4.01
3262 10876 2.978010 CACCACCACCGTCTTGCC 60.978 66.667 0.00 0.00 0.00 4.52
3263 10877 4.619227 ACCACCACCGTCTTGCCG 62.619 66.667 0.00 0.00 0.00 5.69
3299 10913 3.494336 CTTGCCCGCTTCGCAGAG 61.494 66.667 0.00 0.00 38.43 3.35
3312 10926 2.537863 GCAGAGGCGGATGCTATTC 58.462 57.895 4.67 0.00 42.25 1.75
3315 10929 2.843701 CAGAGGCGGATGCTATTCTTT 58.156 47.619 0.00 0.00 42.25 2.52
3319 10933 2.173569 AGGCGGATGCTATTCTTTCCTT 59.826 45.455 0.00 0.00 42.25 3.36
3325 10939 4.103943 GGATGCTATTCTTTCCTTCCTCCT 59.896 45.833 0.00 0.00 0.00 3.69
3326 10940 4.494091 TGCTATTCTTTCCTTCCTCCTG 57.506 45.455 0.00 0.00 0.00 3.86
3340 10954 2.305927 TCCTCCTGAAGTTTCACATCCC 59.694 50.000 0.00 0.00 32.90 3.85
3341 10955 2.350522 CTCCTGAAGTTTCACATCCCG 58.649 52.381 0.00 0.00 32.90 5.14
3348 10962 2.227757 TTTCACATCCCGGGGCTCA 61.228 57.895 23.50 0.00 0.00 4.26
3351 10965 3.492353 ACATCCCGGGGCTCATGG 61.492 66.667 23.50 5.02 0.00 3.66
3352 10966 3.170672 CATCCCGGGGCTCATGGA 61.171 66.667 23.50 0.00 0.00 3.41
3358 10972 4.864334 GGGGCTCATGGACGGCTG 62.864 72.222 0.00 0.00 0.00 4.85
3359 10973 3.785859 GGGCTCATGGACGGCTGA 61.786 66.667 0.00 0.00 0.00 4.26
3360 10974 2.512515 GGCTCATGGACGGCTGAC 60.513 66.667 0.00 0.00 0.00 3.51
3373 10987 3.485431 CTGACGAGCTTGCTGCCG 61.485 66.667 0.00 0.81 44.23 5.69
3401 11015 1.157870 CGTGGGAAACAGTTGTCGCT 61.158 55.000 11.24 0.00 0.00 4.93
3404 11018 1.444119 GGGAAACAGTTGTCGCTGCA 61.444 55.000 0.00 0.00 39.96 4.41
3406 11020 0.657840 GAAACAGTTGTCGCTGCAGT 59.342 50.000 16.64 0.00 39.96 4.40
3408 11022 0.461870 AACAGTTGTCGCTGCAGTCA 60.462 50.000 16.64 9.72 39.96 3.41
3409 11023 0.461870 ACAGTTGTCGCTGCAGTCAA 60.462 50.000 16.64 14.93 39.96 3.18
3410 11024 0.041839 CAGTTGTCGCTGCAGTCAAC 60.042 55.000 27.39 27.39 39.95 3.18
3411 11025 0.461870 AGTTGTCGCTGCAGTCAACA 60.462 50.000 31.55 23.62 41.43 3.33
3420 11034 4.093514 CGCTGCAGTCAACAATCATTTAG 58.906 43.478 16.64 0.00 0.00 1.85
3444 11058 8.449251 AGACTAGGTTAGAATAACTTAGACCG 57.551 38.462 19.61 1.88 34.60 4.79
3448 11062 7.332213 AGGTTAGAATAACTTAGACCGTCTC 57.668 40.000 3.74 0.00 33.31 3.36
3449 11063 6.320926 AGGTTAGAATAACTTAGACCGTCTCC 59.679 42.308 3.74 0.00 33.31 3.71
3450 11064 4.897025 AGAATAACTTAGACCGTCTCCG 57.103 45.455 3.74 0.00 0.00 4.63
3451 11065 3.066481 AGAATAACTTAGACCGTCTCCGC 59.934 47.826 3.74 0.00 0.00 5.54
3463 11077 3.752412 CGTCTCCGCGGATATATGTAA 57.248 47.619 31.19 2.04 0.00 2.41
3464 11078 4.087510 CGTCTCCGCGGATATATGTAAA 57.912 45.455 31.19 1.15 0.00 2.01
3498 11112 7.994425 TGTCTTTGCTATGGTTTAGATGAAA 57.006 32.000 0.00 0.00 0.00 2.69
3500 11114 9.023962 TGTCTTTGCTATGGTTTAGATGAAAAT 57.976 29.630 0.00 0.00 0.00 1.82
3501 11115 9.508567 GTCTTTGCTATGGTTTAGATGAAAATC 57.491 33.333 0.00 0.00 0.00 2.17
3502 11116 9.241919 TCTTTGCTATGGTTTAGATGAAAATCA 57.758 29.630 0.00 0.00 34.15 2.57
3527 11141 4.830826 AAGTTTGAATGAAAGTCGTCCC 57.169 40.909 0.00 0.00 30.38 4.46
3528 11142 2.806244 AGTTTGAATGAAAGTCGTCCCG 59.194 45.455 0.00 0.00 30.38 5.14
3545 11159 4.174762 GTCCCGTTTGTTTAAACTTGCAA 58.825 39.130 18.72 0.00 43.13 4.08
3553 11167 8.354370 CGTTTGTTTAAACTTGCAACAAATTTG 58.646 29.630 18.72 16.67 46.60 2.32
3583 11197 9.575702 GTTTTAGTTAAATTCCGTTTGAAATGC 57.424 29.630 0.00 0.00 36.33 3.56
3584 11198 8.873215 TTTAGTTAAATTCCGTTTGAAATGCA 57.127 26.923 0.00 0.00 36.33 3.96
3595 11223 4.549458 GTTTGAAATGCAGCTAGCTTTGA 58.451 39.130 16.46 1.56 45.94 2.69
3598 11226 6.513806 TTGAAATGCAGCTAGCTTTGAATA 57.486 33.333 16.46 0.00 45.94 1.75
3600 11228 6.558009 TGAAATGCAGCTAGCTTTGAATAAG 58.442 36.000 16.46 1.87 45.94 1.73
3609 11237 3.665173 GCTTTGAATAAGCGACTCTGG 57.335 47.619 0.00 0.00 33.20 3.86
3615 11243 5.188327 TGAATAAGCGACTCTGGTATCAG 57.812 43.478 0.00 0.00 42.21 2.90
3616 11244 4.645136 TGAATAAGCGACTCTGGTATCAGT 59.355 41.667 2.20 0.00 41.59 3.41
3618 11246 1.840737 AGCGACTCTGGTATCAGTGT 58.159 50.000 10.41 10.41 46.53 3.55
3622 11250 2.509166 ACTCTGGTATCAGTGTCCGA 57.491 50.000 4.86 0.00 42.07 4.55
3645 11276 2.682494 GGCCTGGACCGGTCTACA 60.682 66.667 32.52 21.89 0.00 2.74
3648 11279 1.946475 GCCTGGACCGGTCTACAGAC 61.946 65.000 31.06 21.61 44.04 3.51
3664 11295 2.832129 ACAGACAGATATGGTGTCCGTT 59.168 45.455 10.06 0.00 44.65 4.44
3675 11306 1.226746 GTGTCCGTTTGAAGGGTCTG 58.773 55.000 2.74 0.00 35.51 3.51
3706 11337 3.553096 CGATGCAGTTGTATACTCCCTCC 60.553 52.174 4.17 0.00 33.85 4.30
3707 11338 2.827755 TGCAGTTGTATACTCCCTCCA 58.172 47.619 4.17 0.00 33.85 3.86
3724 11355 8.061304 ACTCCCTCCATTCACAAATATAACATT 58.939 33.333 0.00 0.00 0.00 2.71
3778 11411 7.762382 ACGGAATGAATGAAAGAATTAACTCC 58.238 34.615 0.00 0.00 0.00 3.85
3779 11412 7.148069 ACGGAATGAATGAAAGAATTAACTCCC 60.148 37.037 0.00 0.00 0.00 4.30
3780 11413 7.492524 GGAATGAATGAAAGAATTAACTCCCC 58.507 38.462 0.00 0.00 0.00 4.81
3781 11414 7.417911 GGAATGAATGAAAGAATTAACTCCCCC 60.418 40.741 0.00 0.00 0.00 5.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.029073 ATAACGATGCCGAGGCCG 59.971 61.111 12.05 11.13 41.09 6.13
33 34 3.642755 CATAACGATGCCGAGGCC 58.357 61.111 12.05 0.00 41.09 5.19
41 42 2.253758 CCCCGGCAGCATAACGATG 61.254 63.158 0.00 0.00 36.02 3.84
42 43 2.111043 CCCCGGCAGCATAACGAT 59.889 61.111 0.00 0.00 0.00 3.73
43 44 3.379865 GACCCCGGCAGCATAACGA 62.380 63.158 0.00 0.00 0.00 3.85
44 45 2.869503 AAGACCCCGGCAGCATAACG 62.870 60.000 0.00 0.00 0.00 3.18
45 46 1.077716 AAGACCCCGGCAGCATAAC 60.078 57.895 0.00 0.00 0.00 1.89
46 47 1.223487 GAAGACCCCGGCAGCATAA 59.777 57.895 0.00 0.00 0.00 1.90
47 48 2.908015 GAAGACCCCGGCAGCATA 59.092 61.111 0.00 0.00 0.00 3.14
48 49 4.473520 CGAAGACCCCGGCAGCAT 62.474 66.667 0.00 0.00 0.00 3.79
83 84 1.134848 CCAGAAGAAGAAGGCGAGGAG 60.135 57.143 0.00 0.00 0.00 3.69
84 85 0.898320 CCAGAAGAAGAAGGCGAGGA 59.102 55.000 0.00 0.00 0.00 3.71
85 86 0.742635 GCCAGAAGAAGAAGGCGAGG 60.743 60.000 0.00 0.00 37.41 4.63
86 87 2.761071 GCCAGAAGAAGAAGGCGAG 58.239 57.895 0.00 0.00 37.41 5.03
89 90 1.012841 CATCGCCAGAAGAAGAAGGC 58.987 55.000 0.00 0.00 43.61 4.35
90 91 1.012841 GCATCGCCAGAAGAAGAAGG 58.987 55.000 0.00 0.00 0.00 3.46
91 92 1.396301 GTGCATCGCCAGAAGAAGAAG 59.604 52.381 0.00 0.00 0.00 2.85
92 93 1.442769 GTGCATCGCCAGAAGAAGAA 58.557 50.000 0.00 0.00 0.00 2.52
93 94 0.391661 GGTGCATCGCCAGAAGAAGA 60.392 55.000 0.00 0.00 33.65 2.87
94 95 1.699656 CGGTGCATCGCCAGAAGAAG 61.700 60.000 6.36 0.00 32.88 2.85
95 96 1.741401 CGGTGCATCGCCAGAAGAA 60.741 57.895 6.36 0.00 32.88 2.52
96 97 2.125552 CGGTGCATCGCCAGAAGA 60.126 61.111 6.36 0.00 32.88 2.87
97 98 3.197790 CCGGTGCATCGCCAGAAG 61.198 66.667 15.51 0.00 32.88 2.85
98 99 4.776322 CCCGGTGCATCGCCAGAA 62.776 66.667 15.51 0.00 32.88 3.02
100 101 4.776322 TTCCCGGTGCATCGCCAG 62.776 66.667 15.51 4.78 32.88 4.85
101 102 4.776322 CTTCCCGGTGCATCGCCA 62.776 66.667 15.51 0.00 32.88 5.69
105 106 3.936772 TTGCCCTTCCCGGTGCATC 62.937 63.158 0.00 0.00 38.30 3.91
106 107 3.944250 CTTGCCCTTCCCGGTGCAT 62.944 63.158 0.00 0.00 38.30 3.96
107 108 4.659172 CTTGCCCTTCCCGGTGCA 62.659 66.667 0.00 0.00 37.24 4.57
147 148 4.856607 CCGACTCGCTTCCTCCGC 62.857 72.222 0.00 0.00 0.00 5.54
148 149 3.114647 CTCCGACTCGCTTCCTCCG 62.115 68.421 0.00 0.00 0.00 4.63
149 150 2.776913 CCTCCGACTCGCTTCCTCC 61.777 68.421 0.00 0.00 0.00 4.30
150 151 1.995646 GACCTCCGACTCGCTTCCTC 61.996 65.000 0.00 0.00 0.00 3.71
151 152 2.035940 ACCTCCGACTCGCTTCCT 59.964 61.111 0.00 0.00 0.00 3.36
152 153 2.341101 TGACCTCCGACTCGCTTCC 61.341 63.158 0.00 0.00 0.00 3.46
153 154 1.153997 GTGACCTCCGACTCGCTTC 60.154 63.158 0.00 0.00 0.00 3.86
154 155 1.604023 AGTGACCTCCGACTCGCTT 60.604 57.895 0.00 0.00 0.00 4.68
155 156 2.034376 AGTGACCTCCGACTCGCT 59.966 61.111 0.00 0.00 0.00 4.93
156 157 2.179517 CAGTGACCTCCGACTCGC 59.820 66.667 0.00 0.00 0.00 5.03
157 158 2.179517 GCAGTGACCTCCGACTCG 59.820 66.667 0.00 0.00 0.00 4.18
158 159 2.179517 CGCAGTGACCTCCGACTC 59.820 66.667 0.00 0.00 0.00 3.36
159 160 2.282251 TCGCAGTGACCTCCGACT 60.282 61.111 0.00 0.00 0.00 4.18
160 161 2.126424 GTCGCAGTGACCTCCGAC 60.126 66.667 2.32 0.00 42.04 4.79
168 169 2.033424 CGATCTGGATAAGTCGCAGTGA 59.967 50.000 0.00 0.00 0.00 3.41
169 170 2.389059 CGATCTGGATAAGTCGCAGTG 58.611 52.381 0.00 0.00 0.00 3.66
170 171 1.338337 CCGATCTGGATAAGTCGCAGT 59.662 52.381 0.00 0.00 42.00 4.40
171 172 1.336332 CCCGATCTGGATAAGTCGCAG 60.336 57.143 0.00 0.00 42.00 5.18
172 173 0.673985 CCCGATCTGGATAAGTCGCA 59.326 55.000 0.00 0.00 42.00 5.10
173 174 0.667792 GCCCGATCTGGATAAGTCGC 60.668 60.000 7.45 0.00 42.00 5.19
174 175 0.387367 CGCCCGATCTGGATAAGTCG 60.387 60.000 7.45 0.00 42.00 4.18
175 176 0.667792 GCGCCCGATCTGGATAAGTC 60.668 60.000 7.45 0.00 42.00 3.01
176 177 1.367840 GCGCCCGATCTGGATAAGT 59.632 57.895 7.45 0.00 42.00 2.24
177 178 1.374758 GGCGCCCGATCTGGATAAG 60.375 63.158 18.11 0.00 42.00 1.73
178 179 2.741092 GGCGCCCGATCTGGATAA 59.259 61.111 18.11 0.00 42.00 1.75
199 200 4.415332 TCCTTCGTCCTCACGCGC 62.415 66.667 5.73 0.00 46.28 6.86
200 201 2.202492 CTCCTTCGTCCTCACGCG 60.202 66.667 3.53 3.53 46.28 6.01
201 202 2.182030 CCTCCTTCGTCCTCACGC 59.818 66.667 0.00 0.00 46.28 5.34
203 204 1.079750 GCACCTCCTTCGTCCTCAC 60.080 63.158 0.00 0.00 0.00 3.51
204 205 2.636412 CGCACCTCCTTCGTCCTCA 61.636 63.158 0.00 0.00 0.00 3.86
205 206 2.182030 CGCACCTCCTTCGTCCTC 59.818 66.667 0.00 0.00 0.00 3.71
206 207 3.382832 CCGCACCTCCTTCGTCCT 61.383 66.667 0.00 0.00 0.00 3.85
207 208 4.452733 CCCGCACCTCCTTCGTCC 62.453 72.222 0.00 0.00 0.00 4.79
208 209 4.452733 CCCCGCACCTCCTTCGTC 62.453 72.222 0.00 0.00 0.00 4.20
240 241 0.318955 GCTGCTGACGTGGCATTTTT 60.319 50.000 12.25 0.00 39.07 1.94
241 242 1.174712 AGCTGCTGACGTGGCATTTT 61.175 50.000 12.25 0.88 39.07 1.82
242 243 1.601759 AGCTGCTGACGTGGCATTT 60.602 52.632 12.25 2.94 39.07 2.32
243 244 2.033141 AGCTGCTGACGTGGCATT 59.967 55.556 12.25 3.24 39.07 3.56
244 245 2.745100 CAGCTGCTGACGTGGCAT 60.745 61.111 24.88 0.00 39.07 4.40
245 246 3.927548 TCAGCTGCTGACGTGGCA 61.928 61.111 27.35 11.48 35.39 4.92
252 253 4.383861 CCGCCTGTCAGCTGCTGA 62.384 66.667 27.35 27.35 38.25 4.26
271 272 1.144057 GTGTATCTGACCGGCAGGG 59.856 63.158 20.90 0.00 44.98 4.45
272 273 0.179100 CAGTGTATCTGACCGGCAGG 60.179 60.000 20.90 0.00 46.27 4.85
273 274 0.532573 ACAGTGTATCTGACCGGCAG 59.467 55.000 16.84 16.84 46.27 4.85
274 275 0.530744 GACAGTGTATCTGACCGGCA 59.469 55.000 0.00 0.00 46.27 5.69
275 276 0.530744 TGACAGTGTATCTGACCGGC 59.469 55.000 0.00 0.00 46.27 6.13
276 277 3.526931 ATTGACAGTGTATCTGACCGG 57.473 47.619 0.00 0.00 46.27 5.28
277 278 4.035684 CGTATTGACAGTGTATCTGACCG 58.964 47.826 0.00 0.00 46.27 4.79
278 279 3.797256 GCGTATTGACAGTGTATCTGACC 59.203 47.826 0.00 0.00 46.27 4.02
279 280 3.482472 CGCGTATTGACAGTGTATCTGAC 59.518 47.826 0.00 0.00 46.27 3.51
280 281 3.128068 ACGCGTATTGACAGTGTATCTGA 59.872 43.478 11.67 0.00 46.27 3.27
282 283 3.777465 ACGCGTATTGACAGTGTATCT 57.223 42.857 11.67 0.00 0.00 1.98
283 284 4.835199 AAACGCGTATTGACAGTGTATC 57.165 40.909 14.46 0.00 0.00 2.24
284 285 6.141211 CGTATAAACGCGTATTGACAGTGTAT 59.859 38.462 14.46 0.00 43.12 2.29
285 286 5.451982 CGTATAAACGCGTATTGACAGTGTA 59.548 40.000 14.46 0.00 43.12 2.90
286 287 4.263677 CGTATAAACGCGTATTGACAGTGT 59.736 41.667 14.46 0.00 43.12 3.55
287 288 4.733460 CGTATAAACGCGTATTGACAGTG 58.267 43.478 14.46 0.00 43.12 3.66
301 302 7.959109 ACAAAAAGGTCTAAATCGCGTATAAAC 59.041 33.333 5.77 0.00 0.00 2.01
302 303 8.031848 ACAAAAAGGTCTAAATCGCGTATAAA 57.968 30.769 5.77 0.00 0.00 1.40
303 304 7.599630 ACAAAAAGGTCTAAATCGCGTATAA 57.400 32.000 5.77 0.00 0.00 0.98
304 305 8.594687 GTTACAAAAAGGTCTAAATCGCGTATA 58.405 33.333 5.77 0.00 0.00 1.47
305 306 7.458677 GTTACAAAAAGGTCTAAATCGCGTAT 58.541 34.615 5.77 0.00 0.00 3.06
306 307 6.399880 CGTTACAAAAAGGTCTAAATCGCGTA 60.400 38.462 5.77 0.00 0.00 4.42
307 308 5.613142 CGTTACAAAAAGGTCTAAATCGCGT 60.613 40.000 5.77 0.00 0.00 6.01
308 309 4.779523 CGTTACAAAAAGGTCTAAATCGCG 59.220 41.667 0.00 0.00 0.00 5.87
309 310 5.682869 ACGTTACAAAAAGGTCTAAATCGC 58.317 37.500 0.00 0.00 0.00 4.58
310 311 7.113704 AGACGTTACAAAAAGGTCTAAATCG 57.886 36.000 10.43 0.00 41.76 3.34
311 312 8.167345 GCTAGACGTTACAAAAAGGTCTAAATC 58.833 37.037 16.52 8.74 43.01 2.17
312 313 7.118825 GGCTAGACGTTACAAAAAGGTCTAAAT 59.881 37.037 16.52 0.78 43.01 1.40
313 314 6.424812 GGCTAGACGTTACAAAAAGGTCTAAA 59.575 38.462 16.52 3.58 43.01 1.85
314 315 5.928264 GGCTAGACGTTACAAAAAGGTCTAA 59.072 40.000 16.52 6.02 43.01 2.10
315 316 5.473039 GGCTAGACGTTACAAAAAGGTCTA 58.527 41.667 15.51 15.51 42.91 2.59
316 317 4.313282 GGCTAGACGTTACAAAAAGGTCT 58.687 43.478 15.02 15.02 44.50 3.85
317 318 3.434641 GGGCTAGACGTTACAAAAAGGTC 59.565 47.826 0.00 3.11 35.84 3.85
318 319 3.405831 GGGCTAGACGTTACAAAAAGGT 58.594 45.455 0.00 0.00 0.00 3.50
319 320 2.745821 GGGGCTAGACGTTACAAAAAGG 59.254 50.000 0.00 0.00 0.00 3.11
320 321 3.404899 TGGGGCTAGACGTTACAAAAAG 58.595 45.455 0.00 0.00 0.00 2.27
321 322 3.071312 TCTGGGGCTAGACGTTACAAAAA 59.929 43.478 0.00 0.00 0.00 1.94
322 323 2.633967 TCTGGGGCTAGACGTTACAAAA 59.366 45.455 0.00 0.00 0.00 2.44
323 324 2.028748 GTCTGGGGCTAGACGTTACAAA 60.029 50.000 0.00 0.00 37.88 2.83
324 325 1.547372 GTCTGGGGCTAGACGTTACAA 59.453 52.381 0.00 0.00 37.88 2.41
325 326 1.180029 GTCTGGGGCTAGACGTTACA 58.820 55.000 0.00 0.00 37.88 2.41
340 341 2.795175 ACACGTCAGTACCAAGTCTG 57.205 50.000 0.00 0.00 0.00 3.51
341 342 4.924305 TTTACACGTCAGTACCAAGTCT 57.076 40.909 0.00 0.00 0.00 3.24
342 343 5.971895 TTTTTACACGTCAGTACCAAGTC 57.028 39.130 0.00 0.00 0.00 3.01
343 344 6.930667 AATTTTTACACGTCAGTACCAAGT 57.069 33.333 0.00 0.00 0.00 3.16
344 345 7.041916 TGGTAATTTTTACACGTCAGTACCAAG 60.042 37.037 0.00 0.00 36.44 3.61
345 346 6.765036 TGGTAATTTTTACACGTCAGTACCAA 59.235 34.615 0.00 0.00 36.44 3.67
346 347 6.286758 TGGTAATTTTTACACGTCAGTACCA 58.713 36.000 0.00 0.00 36.89 3.25
347 348 6.783892 TGGTAATTTTTACACGTCAGTACC 57.216 37.500 0.00 0.00 0.00 3.34
348 349 8.337532 AGTTTGGTAATTTTTACACGTCAGTAC 58.662 33.333 0.00 0.00 0.00 2.73
349 350 8.436046 AGTTTGGTAATTTTTACACGTCAGTA 57.564 30.769 0.00 0.00 0.00 2.74
350 351 7.324354 AGTTTGGTAATTTTTACACGTCAGT 57.676 32.000 0.00 0.00 0.00 3.41
351 352 7.911205 TCAAGTTTGGTAATTTTTACACGTCAG 59.089 33.333 0.00 0.00 0.00 3.51
352 353 7.759465 TCAAGTTTGGTAATTTTTACACGTCA 58.241 30.769 0.00 0.00 0.00 4.35
353 354 8.791355 ATCAAGTTTGGTAATTTTTACACGTC 57.209 30.769 0.00 0.00 0.00 4.34
354 355 9.667989 GTATCAAGTTTGGTAATTTTTACACGT 57.332 29.630 0.38 0.00 0.00 4.49
355 356 9.120422 GGTATCAAGTTTGGTAATTTTTACACG 57.880 33.333 0.38 0.00 0.00 4.49
356 357 9.968870 TGGTATCAAGTTTGGTAATTTTTACAC 57.031 29.630 0.38 0.00 0.00 2.90
361 362 9.927668 CAGATTGGTATCAAGTTTGGTAATTTT 57.072 29.630 0.00 0.00 36.19 1.82
362 363 9.088987 ACAGATTGGTATCAAGTTTGGTAATTT 57.911 29.630 0.00 0.00 36.19 1.82
363 364 8.650143 ACAGATTGGTATCAAGTTTGGTAATT 57.350 30.769 0.00 0.00 36.19 1.40
364 365 8.650143 AACAGATTGGTATCAAGTTTGGTAAT 57.350 30.769 0.00 0.00 36.19 1.89
365 366 8.472007 AAACAGATTGGTATCAAGTTTGGTAA 57.528 30.769 4.32 0.00 38.60 2.85
366 367 7.175990 GGAAACAGATTGGTATCAAGTTTGGTA 59.824 37.037 8.76 0.00 39.37 3.25
367 368 6.015434 GGAAACAGATTGGTATCAAGTTTGGT 60.015 38.462 8.76 0.00 39.37 3.67
368 369 6.015519 TGGAAACAGATTGGTATCAAGTTTGG 60.016 38.462 8.76 0.00 39.37 3.28
369 370 6.980593 TGGAAACAGATTGGTATCAAGTTTG 58.019 36.000 8.76 3.17 39.37 2.93
370 371 7.595819 TTGGAAACAGATTGGTATCAAGTTT 57.404 32.000 4.70 4.70 44.54 2.66
371 372 7.605449 CATTGGAAACAGATTGGTATCAAGTT 58.395 34.615 0.00 0.00 44.54 2.66
372 373 6.350445 GCATTGGAAACAGATTGGTATCAAGT 60.350 38.462 0.00 0.00 44.54 3.16
373 374 6.038356 GCATTGGAAACAGATTGGTATCAAG 58.962 40.000 0.00 0.00 44.54 3.02
374 375 5.105392 GGCATTGGAAACAGATTGGTATCAA 60.105 40.000 0.00 0.00 44.54 2.57
375 376 4.402155 GGCATTGGAAACAGATTGGTATCA 59.598 41.667 0.00 0.00 44.54 2.15
376 377 4.402155 TGGCATTGGAAACAGATTGGTATC 59.598 41.667 0.00 0.00 44.54 2.24
377 378 4.160252 GTGGCATTGGAAACAGATTGGTAT 59.840 41.667 0.00 0.00 44.54 2.73
378 379 3.509575 GTGGCATTGGAAACAGATTGGTA 59.490 43.478 0.00 0.00 44.54 3.25
379 380 2.299867 GTGGCATTGGAAACAGATTGGT 59.700 45.455 0.00 0.00 44.54 3.67
380 381 2.299582 TGTGGCATTGGAAACAGATTGG 59.700 45.455 0.00 0.00 44.54 3.16
381 382 3.663995 TGTGGCATTGGAAACAGATTG 57.336 42.857 0.00 0.00 44.54 2.67
382 383 4.895668 ATTGTGGCATTGGAAACAGATT 57.104 36.364 0.00 0.00 44.54 2.40
383 384 4.895668 AATTGTGGCATTGGAAACAGAT 57.104 36.364 0.00 0.00 44.54 2.90
384 385 5.479724 TCATAATTGTGGCATTGGAAACAGA 59.520 36.000 2.06 0.00 44.54 3.41
385 386 5.722263 TCATAATTGTGGCATTGGAAACAG 58.278 37.500 2.06 0.00 44.54 3.16
386 387 5.735285 TCATAATTGTGGCATTGGAAACA 57.265 34.783 2.06 0.00 39.83 2.83
387 388 7.491682 AGTATCATAATTGTGGCATTGGAAAC 58.508 34.615 2.06 0.00 0.00 2.78
388 389 7.658525 AGTATCATAATTGTGGCATTGGAAA 57.341 32.000 2.06 0.00 0.00 3.13
389 390 7.123997 ACAAGTATCATAATTGTGGCATTGGAA 59.876 33.333 9.67 0.00 44.22 3.53
390 391 6.606796 ACAAGTATCATAATTGTGGCATTGGA 59.393 34.615 9.67 0.00 44.22 3.53
391 392 6.808829 ACAAGTATCATAATTGTGGCATTGG 58.191 36.000 9.67 0.00 44.22 3.16
403 404 8.387354 CGAGTAAATTGCACACAAGTATCATAA 58.613 33.333 0.00 0.00 39.69 1.90
404 405 7.762159 TCGAGTAAATTGCACACAAGTATCATA 59.238 33.333 0.00 0.00 39.69 2.15
405 406 6.593770 TCGAGTAAATTGCACACAAGTATCAT 59.406 34.615 0.00 0.00 39.69 2.45
406 407 5.929415 TCGAGTAAATTGCACACAAGTATCA 59.071 36.000 0.00 0.00 39.69 2.15
407 408 6.403333 TCGAGTAAATTGCACACAAGTATC 57.597 37.500 0.00 0.00 39.69 2.24
408 409 6.818644 AGATCGAGTAAATTGCACACAAGTAT 59.181 34.615 0.00 0.00 39.69 2.12
409 410 6.090763 CAGATCGAGTAAATTGCACACAAGTA 59.909 38.462 0.00 0.00 39.69 2.24
410 411 4.997395 AGATCGAGTAAATTGCACACAAGT 59.003 37.500 0.00 0.00 39.69 3.16
411 412 5.319139 CAGATCGAGTAAATTGCACACAAG 58.681 41.667 0.00 0.00 39.69 3.16
412 413 4.154015 CCAGATCGAGTAAATTGCACACAA 59.846 41.667 0.00 0.00 40.87 3.33
413 414 3.684305 CCAGATCGAGTAAATTGCACACA 59.316 43.478 0.00 0.00 0.00 3.72
414 415 3.932710 TCCAGATCGAGTAAATTGCACAC 59.067 43.478 0.00 0.00 0.00 3.82
415 416 4.183865 CTCCAGATCGAGTAAATTGCACA 58.816 43.478 0.00 0.00 0.00 4.57
416 417 4.184629 ACTCCAGATCGAGTAAATTGCAC 58.815 43.478 1.80 0.00 41.37 4.57
417 418 4.160439 AGACTCCAGATCGAGTAAATTGCA 59.840 41.667 3.55 0.00 43.22 4.08
418 419 4.688021 AGACTCCAGATCGAGTAAATTGC 58.312 43.478 3.55 0.00 43.22 3.56
419 420 7.136119 GTCTAGACTCCAGATCGAGTAAATTG 58.864 42.308 15.91 0.00 43.22 2.32
420 421 6.017770 CGTCTAGACTCCAGATCGAGTAAATT 60.018 42.308 20.34 0.00 43.22 1.82
421 422 5.467399 CGTCTAGACTCCAGATCGAGTAAAT 59.533 44.000 20.34 0.00 43.22 1.40
422 423 4.809958 CGTCTAGACTCCAGATCGAGTAAA 59.190 45.833 20.34 0.00 43.22 2.01
423 424 4.370049 CGTCTAGACTCCAGATCGAGTAA 58.630 47.826 20.34 0.00 43.22 2.24
424 425 3.799574 GCGTCTAGACTCCAGATCGAGTA 60.800 52.174 20.34 0.00 43.22 2.59
425 426 2.828877 CGTCTAGACTCCAGATCGAGT 58.171 52.381 20.34 3.22 45.86 4.18
426 427 1.529438 GCGTCTAGACTCCAGATCGAG 59.471 57.143 20.34 2.35 35.88 4.04
427 428 1.584175 GCGTCTAGACTCCAGATCGA 58.416 55.000 20.34 0.00 0.00 3.59
428 429 0.233590 CGCGTCTAGACTCCAGATCG 59.766 60.000 20.34 6.07 0.00 3.69
555 556 5.934402 TCCTGTAATTCTTAGACAGTCCC 57.066 43.478 0.00 0.00 39.16 4.46
571 572 1.951602 GCTGATTGCATGCATCCTGTA 59.048 47.619 23.37 5.43 42.31 2.74
604 605 1.891919 GCCACGTCACACACACCAT 60.892 57.895 0.00 0.00 0.00 3.55
605 606 2.512745 GCCACGTCACACACACCA 60.513 61.111 0.00 0.00 0.00 4.17
607 608 3.014036 CTGCCACGTCACACACAC 58.986 61.111 0.00 0.00 0.00 3.82
608 609 2.867793 AAGCTGCCACGTCACACACA 62.868 55.000 0.00 0.00 0.00 3.72
625 626 4.687483 GCCCACACATGAAATTTTGAGAAG 59.313 41.667 0.00 0.00 0.00 2.85
628 629 4.021719 AGAGCCCACACATGAAATTTTGAG 60.022 41.667 0.00 0.00 0.00 3.02
629 630 3.896888 AGAGCCCACACATGAAATTTTGA 59.103 39.130 0.00 0.00 0.00 2.69
630 631 3.991773 CAGAGCCCACACATGAAATTTTG 59.008 43.478 0.00 0.00 0.00 2.44
631 632 3.896888 TCAGAGCCCACACATGAAATTTT 59.103 39.130 0.00 0.00 0.00 1.82
632 633 3.499338 TCAGAGCCCACACATGAAATTT 58.501 40.909 0.00 0.00 0.00 1.82
633 634 3.159213 TCAGAGCCCACACATGAAATT 57.841 42.857 0.00 0.00 0.00 1.82
634 635 2.885135 TCAGAGCCCACACATGAAAT 57.115 45.000 0.00 0.00 0.00 2.17
646 647 2.899339 GCCTGCCGATTCAGAGCC 60.899 66.667 0.00 0.00 36.19 4.70
652 653 0.942962 CTTGATCAGCCTGCCGATTC 59.057 55.000 0.00 0.00 0.00 2.52
698 699 5.696822 TGTAAGTATTCGTGACTGACAGTC 58.303 41.667 25.76 25.76 45.26 3.51
699 700 5.700722 TGTAAGTATTCGTGACTGACAGT 57.299 39.130 8.12 8.12 34.00 3.55
708 709 7.928103 AGTAGTATGGTCTGTAAGTATTCGTG 58.072 38.462 0.00 0.00 33.76 4.35
728 729 6.591750 ACACAGCTTGTCATAAGTAGTAGT 57.408 37.500 0.00 0.00 29.79 2.73
767 771 4.341502 GTTGCACGCCGGCATGTT 62.342 61.111 28.98 3.78 44.48 2.71
792 801 2.734591 GGCCGATACGAGATGCCA 59.265 61.111 0.00 0.00 41.76 4.92
831 840 2.038269 TCCAAGCGTTTCCCGATGC 61.038 57.895 0.00 0.00 39.56 3.91
863 872 1.731613 TAGCTTTCGGTGTGCGTCG 60.732 57.895 0.00 0.00 0.00 5.12
983 994 0.603707 CATGACCGGCAGTGTGAGTT 60.604 55.000 0.00 0.00 0.00 3.01
996 1007 2.409948 AAGTAGCTTGCTCCATGACC 57.590 50.000 0.00 0.00 0.00 4.02
997 1008 4.130286 AGTAAGTAGCTTGCTCCATGAC 57.870 45.455 0.00 0.00 31.08 3.06
1030 1051 0.469144 GGGAGGAGTAGAGCCAGGAG 60.469 65.000 0.00 0.00 0.00 3.69
1719 4138 1.883732 CTCGAAGCTCTTCCGGTGA 59.116 57.895 0.00 0.00 36.27 4.02
1889 9422 2.212327 GCTAGCTGGGGAGCTGTTA 58.788 57.895 7.70 0.00 45.81 2.41
1906 9439 9.662947 TTAAACCTAAAGTATAGGAACTGAAGC 57.337 33.333 8.46 0.00 41.52 3.86
1934 9467 7.448904 AGATATGATCTTGTTGCTTCTCGCAG 61.449 42.308 0.00 0.00 43.17 5.18
1951 9484 8.041323 AGTCACGTGGAAACTAAAAGATATGAT 58.959 33.333 17.00 0.00 0.00 2.45
1952 9485 7.383687 AGTCACGTGGAAACTAAAAGATATGA 58.616 34.615 17.00 0.00 0.00 2.15
1963 9499 2.159142 AGTTCGAAGTCACGTGGAAACT 60.159 45.455 17.00 9.25 34.70 2.66
1979 9521 5.331607 CGCGGAATAGTAAATCTTGAGTTCG 60.332 44.000 0.00 0.00 0.00 3.95
1995 9537 0.748450 ACGAAGGGAATCGCGGAATA 59.252 50.000 6.13 0.00 46.51 1.75
2001 9543 2.225727 AGTTTTCAACGAAGGGAATCGC 59.774 45.455 0.00 0.00 46.51 4.58
2007 9549 4.156008 CCATCCTAAGTTTTCAACGAAGGG 59.844 45.833 0.00 0.00 38.18 3.95
2034 9576 1.089112 CATGCCAGCAAGTCATCGAA 58.911 50.000 0.00 0.00 0.00 3.71
2040 9582 0.675633 AAACCACATGCCAGCAAGTC 59.324 50.000 0.00 0.00 0.00 3.01
2041 9583 1.122227 AAAACCACATGCCAGCAAGT 58.878 45.000 0.00 0.00 0.00 3.16
2059 9601 4.222145 GTGACATGTGGTCCCTAGAACTAA 59.778 45.833 1.15 0.00 46.38 2.24
2082 9624 5.445939 CGATGATTTTCACCCGTTGTCTTAG 60.446 44.000 0.00 0.00 0.00 2.18
2090 9632 2.762535 ACTCGATGATTTTCACCCGT 57.237 45.000 0.00 0.00 30.98 5.28
2125 9667 8.902540 TGTGTGCAATTTAGGATAAGTATAGG 57.097 34.615 0.00 0.00 0.00 2.57
2130 9672 6.437162 ACCAATGTGTGCAATTTAGGATAAGT 59.563 34.615 0.00 0.00 0.00 2.24
2131 9673 6.866480 ACCAATGTGTGCAATTTAGGATAAG 58.134 36.000 0.00 0.00 0.00 1.73
2135 9677 6.849085 AATACCAATGTGTGCAATTTAGGA 57.151 33.333 0.00 0.00 0.00 2.94
2161 9709 4.254492 GGCACTAAAGAGGTCCTACAAAG 58.746 47.826 0.00 0.00 0.00 2.77
2162 9710 3.306502 CGGCACTAAAGAGGTCCTACAAA 60.307 47.826 0.00 0.00 0.00 2.83
2198 9746 1.497278 CCATTGGAGTGTCGTTGCG 59.503 57.895 0.00 0.00 0.00 4.85
2237 9785 2.779755 TCTGCATGACGTTTGGGTAT 57.220 45.000 0.00 0.00 0.00 2.73
2306 9854 0.615331 GGTCAGCCAAGTCATCCTCA 59.385 55.000 0.00 0.00 34.09 3.86
2321 9869 5.014858 ACGAGTCTGAGGTATTTTAGGTCA 58.985 41.667 0.00 0.00 0.00 4.02
2423 9971 1.005394 CTTTGGCACGTCGTACCCT 60.005 57.895 12.14 0.00 0.00 4.34
2447 9995 1.154413 CGCATTCACAAGCACGGTC 60.154 57.895 0.00 0.00 0.00 4.79
2520 10068 0.534412 ATGCCAGACTCGAACCTCTG 59.466 55.000 7.24 7.24 34.73 3.35
2780 10328 7.763528 ACAAACTATTGAAGTGCAAATCAAACA 59.236 29.630 16.62 8.91 40.48 2.83
2829 10377 3.193691 AGTCTCGACATTCGACAAAGGAT 59.806 43.478 4.78 0.00 44.82 3.24
2897 10457 1.134699 TGCAATGGTCAACCGCAAAAA 60.135 42.857 0.00 0.00 39.43 1.94
2898 10458 0.461548 TGCAATGGTCAACCGCAAAA 59.538 45.000 0.00 0.00 39.43 2.44
2899 10459 0.461548 TTGCAATGGTCAACCGCAAA 59.538 45.000 9.60 0.00 37.09 3.68
2900 10460 0.031857 CTTGCAATGGTCAACCGCAA 59.968 50.000 0.00 11.02 37.48 4.85
2901 10461 1.106351 ACTTGCAATGGTCAACCGCA 61.106 50.000 0.00 0.00 39.43 5.69
2902 10462 0.031994 AACTTGCAATGGTCAACCGC 59.968 50.000 0.00 0.00 39.43 5.68
2903 10463 2.507339 AAACTTGCAATGGTCAACCG 57.493 45.000 0.00 0.00 39.43 4.44
2904 10464 4.202111 ACAGTAAACTTGCAATGGTCAACC 60.202 41.667 0.00 0.00 0.00 3.77
2905 10465 4.932146 ACAGTAAACTTGCAATGGTCAAC 58.068 39.130 0.00 0.00 0.00 3.18
2906 10466 4.642437 TGACAGTAAACTTGCAATGGTCAA 59.358 37.500 0.00 0.00 30.63 3.18
2907 10467 4.203226 TGACAGTAAACTTGCAATGGTCA 58.797 39.130 0.00 3.96 0.00 4.02
2908 10468 4.829064 TGACAGTAAACTTGCAATGGTC 57.171 40.909 0.00 1.38 0.00 4.02
2944 10504 5.483811 TGTGATTCAAATGCAATTGCTCAT 58.516 33.333 29.37 14.21 42.66 2.90
2948 10508 5.148568 GGTTTGTGATTCAAATGCAATTGC 58.851 37.500 23.69 23.69 45.88 3.56
2960 10520 1.271488 TGGTACCGGGGTTTGTGATTC 60.271 52.381 6.32 0.00 0.00 2.52
2974 10534 3.199891 GTTCGGCGCCATGGTACC 61.200 66.667 28.98 14.05 0.00 3.34
2976 10536 1.302383 CTTTGTTCGGCGCCATGGTA 61.302 55.000 28.98 5.22 0.00 3.25
2983 10543 2.325509 ATTAACACTTTGTTCGGCGC 57.674 45.000 0.00 0.00 40.22 6.53
2988 10548 9.820229 TGATTCGACATAATTAACACTTTGTTC 57.180 29.630 0.00 0.00 40.22 3.18
3004 10564 8.437360 TGCAAATAAAGAGTATGATTCGACAT 57.563 30.769 0.00 0.00 0.00 3.06
3044 10606 3.469739 CTTTCAAGGTGGCTGCAATTTT 58.530 40.909 0.50 0.00 0.00 1.82
3046 10608 1.270465 GCTTTCAAGGTGGCTGCAATT 60.270 47.619 0.50 0.00 0.00 2.32
3106 10668 2.341168 CGTGTTTTTGTGTGTGAAGTGC 59.659 45.455 0.00 0.00 0.00 4.40
3110 10672 3.644884 AACCGTGTTTTTGTGTGTGAA 57.355 38.095 0.00 0.00 0.00 3.18
3111 10673 4.966965 ATAACCGTGTTTTTGTGTGTGA 57.033 36.364 0.00 0.00 0.00 3.58
3112 10674 7.687005 ATTTATAACCGTGTTTTTGTGTGTG 57.313 32.000 0.00 0.00 0.00 3.82
3113 10675 9.968870 ATAATTTATAACCGTGTTTTTGTGTGT 57.031 25.926 0.00 0.00 0.00 3.72
3120 10682 8.308207 AGGTTGCATAATTTATAACCGTGTTTT 58.692 29.630 12.37 0.00 44.14 2.43
3122 10684 7.399245 AGGTTGCATAATTTATAACCGTGTT 57.601 32.000 12.37 0.00 44.14 3.32
3184 10798 2.457598 ACTCTTCCTTGCTATCGGTGA 58.542 47.619 0.00 0.00 0.00 4.02
3186 10800 5.176592 GTTTTACTCTTCCTTGCTATCGGT 58.823 41.667 0.00 0.00 0.00 4.69
3195 10809 4.767409 GCCTTCCATGTTTTACTCTTCCTT 59.233 41.667 0.00 0.00 0.00 3.36
3206 10820 2.275380 GCGGTGGCCTTCCATGTTT 61.275 57.895 3.32 0.00 45.62 2.83
3235 10849 1.903404 GTGGTGGTGGCCTTCTTGG 60.903 63.158 3.32 0.00 39.35 3.61
3236 10850 1.903404 GGTGGTGGTGGCCTTCTTG 60.903 63.158 3.32 0.00 0.00 3.02
3238 10852 3.953775 CGGTGGTGGTGGCCTTCT 61.954 66.667 3.32 0.00 0.00 2.85
3239 10853 4.265056 ACGGTGGTGGTGGCCTTC 62.265 66.667 3.32 0.00 0.00 3.46
3243 10857 2.978010 CAAGACGGTGGTGGTGGC 60.978 66.667 0.00 0.00 0.00 5.01
3244 10858 2.978010 GCAAGACGGTGGTGGTGG 60.978 66.667 0.00 0.00 0.00 4.61
3245 10859 2.978010 GGCAAGACGGTGGTGGTG 60.978 66.667 0.00 0.00 0.00 4.17
3246 10860 4.619227 CGGCAAGACGGTGGTGGT 62.619 66.667 0.00 0.00 0.00 4.16
3255 10869 4.329545 TGTGAGGGCCGGCAAGAC 62.330 66.667 30.85 18.56 0.00 3.01
3256 10870 4.020617 CTGTGAGGGCCGGCAAGA 62.021 66.667 30.85 8.07 0.00 3.02
3296 10910 2.224402 GGAAAGAATAGCATCCGCCTCT 60.224 50.000 0.00 0.00 39.83 3.69
3299 10913 2.262423 AGGAAAGAATAGCATCCGCC 57.738 50.000 0.00 0.00 39.83 6.13
3305 10919 4.104086 TCAGGAGGAAGGAAAGAATAGCA 58.896 43.478 0.00 0.00 0.00 3.49
3319 10933 2.305927 GGGATGTGAAACTTCAGGAGGA 59.694 50.000 0.00 0.00 42.30 3.71
3325 10939 0.037590 CCCCGGGATGTGAAACTTCA 59.962 55.000 26.32 0.00 42.30 3.02
3326 10940 1.313091 GCCCCGGGATGTGAAACTTC 61.313 60.000 26.32 0.00 40.02 3.01
3341 10955 4.864334 CAGCCGTCCATGAGCCCC 62.864 72.222 0.00 0.00 0.00 5.80
3358 10972 4.742201 TCCGGCAGCAAGCTCGTC 62.742 66.667 0.00 0.00 44.79 4.20
3361 10975 3.984193 ATGGTCCGGCAGCAAGCTC 62.984 63.158 0.00 0.00 44.79 4.09
3362 10976 4.039092 ATGGTCCGGCAGCAAGCT 62.039 61.111 0.00 0.00 44.79 3.74
3363 10977 3.818787 CATGGTCCGGCAGCAAGC 61.819 66.667 0.00 0.00 44.65 4.01
3364 10978 2.360350 ACATGGTCCGGCAGCAAG 60.360 61.111 0.00 1.54 35.67 4.01
3365 10979 2.359850 GACATGGTCCGGCAGCAA 60.360 61.111 0.00 0.00 35.67 3.91
3366 10980 4.758251 CGACATGGTCCGGCAGCA 62.758 66.667 0.00 1.90 36.77 4.41
3367 10981 4.760047 ACGACATGGTCCGGCAGC 62.760 66.667 0.00 0.00 0.00 5.25
3368 10982 2.815211 CACGACATGGTCCGGCAG 60.815 66.667 0.00 0.00 0.00 4.85
3369 10983 4.386951 CCACGACATGGTCCGGCA 62.387 66.667 0.00 0.00 44.46 5.69
3392 11006 0.461870 TGTTGACTGCAGCGACAACT 60.462 50.000 31.76 10.87 41.76 3.16
3401 11015 6.595326 CCTAGTCTAAATGATTGTTGACTGCA 59.405 38.462 14.10 0.00 36.39 4.41
3404 11018 9.877178 CTAACCTAGTCTAAATGATTGTTGACT 57.123 33.333 10.95 10.95 38.21 3.41
3420 11034 8.219546 ACGGTCTAAGTTATTCTAACCTAGTC 57.780 38.462 0.00 0.00 0.00 2.59
3464 11078 9.777297 AAACCATAGCAAAGACATTACATTTTT 57.223 25.926 0.00 0.00 0.00 1.94
3471 11085 9.679661 TTCATCTAAACCATAGCAAAGACATTA 57.320 29.630 0.00 0.00 0.00 1.90
3476 11090 9.241919 TGATTTTCATCTAAACCATAGCAAAGA 57.758 29.630 0.00 0.00 0.00 2.52
3498 11112 9.965824 ACGACTTTCATTCAAACTTAAATGATT 57.034 25.926 0.00 0.00 40.53 2.57
3500 11114 8.073768 GGACGACTTTCATTCAAACTTAAATGA 58.926 33.333 0.00 0.00 39.48 2.57
3501 11115 7.326063 GGGACGACTTTCATTCAAACTTAAATG 59.674 37.037 0.00 0.00 34.80 2.32
3502 11116 7.368059 GGGACGACTTTCATTCAAACTTAAAT 58.632 34.615 0.00 0.00 0.00 1.40
3523 11137 3.771798 TGCAAGTTTAAACAAACGGGAC 58.228 40.909 20.06 2.02 37.71 4.46
3562 11176 5.405269 GCTGCATTTCAAACGGAATTTAACT 59.595 36.000 0.00 0.00 34.91 2.24
3566 11180 3.993920 AGCTGCATTTCAAACGGAATTT 58.006 36.364 1.02 0.00 34.91 1.82
3573 11187 4.549458 TCAAAGCTAGCTGCATTTCAAAC 58.451 39.130 20.16 0.00 45.94 2.93
3579 11193 4.497006 CGCTTATTCAAAGCTAGCTGCATT 60.497 41.667 20.16 6.12 45.94 3.56
3583 11197 3.868077 AGTCGCTTATTCAAAGCTAGCTG 59.132 43.478 20.16 7.93 40.94 4.24
3584 11198 4.116238 GAGTCGCTTATTCAAAGCTAGCT 58.884 43.478 12.68 12.68 40.94 3.32
3595 11223 4.402793 ACACTGATACCAGAGTCGCTTATT 59.597 41.667 0.00 0.00 39.49 1.40
3598 11226 2.164624 GACACTGATACCAGAGTCGCTT 59.835 50.000 0.00 0.00 45.88 4.68
3600 11228 2.196295 GACACTGATACCAGAGTCGC 57.804 55.000 0.00 0.00 45.88 5.19
3628 11259 2.682494 TGTAGACCGGTCCAGGCC 60.682 66.667 30.82 14.32 33.69 5.19
3629 11260 1.681327 TCTGTAGACCGGTCCAGGC 60.681 63.158 30.82 17.90 33.69 4.85
3632 11263 0.402887 TCTGTCTGTAGACCGGTCCA 59.597 55.000 30.82 20.76 44.15 4.02
3633 11264 1.765230 ATCTGTCTGTAGACCGGTCC 58.235 55.000 30.82 17.09 44.15 4.46
3645 11276 3.513912 TCAAACGGACACCATATCTGTCT 59.486 43.478 9.09 0.00 38.50 3.41
3648 11279 3.623060 CCTTCAAACGGACACCATATCTG 59.377 47.826 0.00 0.00 0.00 2.90
3664 11295 0.534203 GTCCAACGCAGACCCTTCAA 60.534 55.000 0.00 0.00 0.00 2.69
3675 11306 2.325082 AACTGCATCGGTCCAACGC 61.325 57.895 0.00 0.00 0.00 4.84
3684 11315 3.643763 GAGGGAGTATACAACTGCATCG 58.356 50.000 5.50 0.00 45.35 3.84
3740 11371 7.496747 TCATTCATTCCGTATGTAGTTCATCA 58.503 34.615 0.00 0.00 37.91 3.07
3741 11372 7.946655 TCATTCATTCCGTATGTAGTTCATC 57.053 36.000 0.00 0.00 37.91 2.92
3744 11375 8.420374 TCTTTCATTCATTCCGTATGTAGTTC 57.580 34.615 0.00 0.00 35.64 3.01
3745 11376 8.786826 TTCTTTCATTCATTCCGTATGTAGTT 57.213 30.769 0.00 0.00 35.64 2.24
3754 11385 7.196331 GGGAGTTAATTCTTTCATTCATTCCG 58.804 38.462 0.00 0.00 0.00 4.30
3756 11387 7.492524 GGGGGAGTTAATTCTTTCATTCATTC 58.507 38.462 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.