Multiple sequence alignment - TraesCS6D01G131000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G131000 chr6D 100.000 5928 0 0 1 5928 97552159 97558086 0.000000e+00 10948.0
1 TraesCS6D01G131000 chr6D 94.301 193 11 0 5716 5908 110741323 110741515 4.490000e-76 296.0
2 TraesCS6D01G131000 chr6D 90.960 177 15 1 450 626 97353341 97353516 2.760000e-58 237.0
3 TraesCS6D01G131000 chr6D 96.053 76 3 0 628 703 97353716 97353791 2.240000e-24 124.0
4 TraesCS6D01G131000 chr6B 85.840 3962 333 94 1762 5601 181947284 181951139 0.000000e+00 3999.0
5 TraesCS6D01G131000 chr6B 88.177 1108 77 25 651 1747 181946008 181947072 0.000000e+00 1271.0
6 TraesCS6D01G131000 chr6B 83.978 362 27 11 298 650 181944269 181944608 9.590000e-83 318.0
7 TraesCS6D01G131000 chr6B 89.627 241 21 4 466 705 181728368 181728605 2.680000e-78 303.0
8 TraesCS6D01G131000 chr6B 95.288 191 9 0 5718 5908 507371678 507371868 2.680000e-78 303.0
9 TraesCS6D01G131000 chr6B 90.270 185 16 2 1 184 181943864 181944047 2.130000e-59 241.0
10 TraesCS6D01G131000 chr6B 79.461 297 38 17 1 293 181943906 181944183 7.840000e-44 189.0
11 TraesCS6D01G131000 chr6B 84.397 141 20 2 1 140 181943947 181944086 2.880000e-28 137.0
12 TraesCS6D01G131000 chr6A 91.693 1553 89 17 1762 3298 116686801 116688329 0.000000e+00 2117.0
13 TraesCS6D01G131000 chr6A 90.204 1664 100 26 3366 4979 116688373 116690023 0.000000e+00 2111.0
14 TraesCS6D01G131000 chr6A 87.632 1229 103 26 382 1592 116685180 116686377 0.000000e+00 1382.0
15 TraesCS6D01G131000 chr6A 85.795 711 31 23 4977 5620 116697827 116698534 0.000000e+00 689.0
16 TraesCS6D01G131000 chr6A 87.008 254 30 3 451 703 116603176 116603427 3.500000e-72 283.0
17 TraesCS6D01G131000 chr4D 96.296 189 7 0 5718 5906 455257796 455257984 1.600000e-80 311.0
18 TraesCS6D01G131000 chr4D 94.819 193 10 0 5716 5908 455259917 455259725 9.650000e-78 302.0
19 TraesCS6D01G131000 chr4D 75.439 228 43 6 1382 1608 313878050 313877835 1.360000e-16 99.0
20 TraesCS6D01G131000 chr2D 95.812 191 8 0 5717 5907 274922427 274922617 5.770000e-80 309.0
21 TraesCS6D01G131000 chr7B 95.288 191 9 0 5716 5906 145930450 145930260 2.680000e-78 303.0
22 TraesCS6D01G131000 chr2B 95.288 191 9 0 5716 5906 267902739 267902549 2.680000e-78 303.0
23 TraesCS6D01G131000 chr2B 84.967 153 14 7 471 618 151107768 151107916 4.790000e-31 147.0
24 TraesCS6D01G131000 chr5B 94.764 191 10 0 5718 5908 319885595 319885785 1.250000e-76 298.0
25 TraesCS6D01G131000 chr5B 94.764 191 10 0 5718 5908 504044902 504044712 1.250000e-76 298.0
26 TraesCS6D01G131000 chr1A 86.875 160 15 5 463 618 574488867 574489024 2.200000e-39 174.0
27 TraesCS6D01G131000 chr2A 84.177 158 16 8 471 623 98879685 98879532 1.720000e-30 145.0
28 TraesCS6D01G131000 chr2A 79.279 222 34 12 486 701 102325257 102325472 1.720000e-30 145.0
29 TraesCS6D01G131000 chr2A 97.561 41 1 0 3295 3335 129098307 129098267 2.960000e-08 71.3
30 TraesCS6D01G131000 chr3A 75.000 228 44 6 1382 1608 597319855 597320070 6.330000e-15 93.5
31 TraesCS6D01G131000 chr3D 97.561 41 1 0 3294 3334 587100489 587100529 2.960000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G131000 chr6D 97552159 97558086 5927 False 10948.000000 10948 100.000000 1 5928 1 chr6D.!!$F1 5927
1 TraesCS6D01G131000 chr6B 181943864 181951139 7275 False 1025.833333 3999 85.353833 1 5601 6 chr6B.!!$F3 5600
2 TraesCS6D01G131000 chr6A 116685180 116690023 4843 False 1870.000000 2117 89.843000 382 4979 3 chr6A.!!$F3 4597
3 TraesCS6D01G131000 chr6A 116697827 116698534 707 False 689.000000 689 85.795000 4977 5620 1 chr6A.!!$F2 643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 430 0.245813 GCGGGAAGAGACTACGGTTT 59.754 55.0 0.0 0.0 0.0 3.27 F
1201 2742 0.249120 TGGCGATGATCCGTTTCTGT 59.751 50.0 0.0 0.0 0.0 3.41 F
2015 3877 0.032952 TCCACGACAAGTACACTGCC 59.967 55.0 0.0 0.0 0.0 4.85 F
2253 4115 0.629058 TTACCTTTCCCCATCAGGCC 59.371 55.0 0.0 0.0 0.0 5.19 F
3574 5497 0.320771 TCGCAGGAAAGGTCTTCAGC 60.321 55.0 0.0 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1728 3271 0.532417 TTGGCAATTGCAGCACAACC 60.532 50.000 30.32 11.9 42.27 3.77 R
2937 4818 0.393808 AACACGGACCTGCAACAGTT 60.394 50.000 0.00 0.0 0.00 3.16 R
3443 5361 0.944386 CGGAGTTGAACCTGTGTTGG 59.056 55.000 0.00 0.0 33.97 3.77 R
3886 5818 1.067000 ACTCTGATGACAGCTCTGTGC 60.067 52.381 7.33 0.0 45.05 4.57 R
5555 7616 0.037046 TGATCATGATCGGCCCATCG 60.037 55.000 26.52 0.0 40.63 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.375766 GCACCTGAACGAGAGCACG 61.376 63.158 0.00 0.00 39.31 5.34
27 28 2.807045 CGAGAGCACGAGCACCAC 60.807 66.667 7.77 0.00 45.49 4.16
30 31 3.044305 GAGCACGAGCACCACACC 61.044 66.667 7.77 0.00 45.49 4.16
41 42 2.125106 CCACACCGCCCTTCTAGC 60.125 66.667 0.00 0.00 0.00 3.42
83 84 2.058595 ACCTCGCCGCCATTCTAGT 61.059 57.895 0.00 0.00 0.00 2.57
93 94 1.959042 CCATTCTAGTGCGCCAGATT 58.041 50.000 4.18 0.00 0.00 2.40
123 124 4.035102 ACCCTCCGCCCTTCAAGC 62.035 66.667 0.00 0.00 0.00 4.01
127 128 3.551496 CTCCGCCCTTCAAGCCACA 62.551 63.158 0.00 0.00 0.00 4.17
135 136 1.271543 CCTTCAAGCCACACCAGATCA 60.272 52.381 0.00 0.00 0.00 2.92
172 174 4.998400 TGCCTTGTAGCGCGCCAA 62.998 61.111 30.33 23.84 34.65 4.52
184 186 1.278038 GCGCCAAATCGAGAGCATC 59.722 57.895 0.00 0.00 0.00 3.91
185 187 1.431488 GCGCCAAATCGAGAGCATCA 61.431 55.000 0.00 0.00 37.82 3.07
187 189 1.803998 CGCCAAATCGAGAGCATCAGA 60.804 52.381 0.00 0.00 37.82 3.27
188 190 2.492012 GCCAAATCGAGAGCATCAGAT 58.508 47.619 0.00 0.00 37.82 2.90
189 191 2.877168 GCCAAATCGAGAGCATCAGATT 59.123 45.455 0.00 0.00 43.23 2.40
190 192 3.303857 GCCAAATCGAGAGCATCAGATTG 60.304 47.826 0.00 0.00 41.52 2.67
191 193 4.124970 CCAAATCGAGAGCATCAGATTGA 58.875 43.478 0.00 0.00 41.52 2.57
192 194 4.211584 CCAAATCGAGAGCATCAGATTGAG 59.788 45.833 0.00 0.00 41.52 3.02
193 195 4.933505 AATCGAGAGCATCAGATTGAGA 57.066 40.909 0.00 0.00 41.08 3.27
194 196 3.986442 TCGAGAGCATCAGATTGAGAG 57.014 47.619 0.00 0.00 37.82 3.20
195 197 2.034432 TCGAGAGCATCAGATTGAGAGC 59.966 50.000 0.00 0.00 37.82 4.09
222 251 3.054802 CACAACCTTGAAGCTCCTATCCT 60.055 47.826 0.00 0.00 0.00 3.24
226 255 2.295909 CCTTGAAGCTCCTATCCTCGAG 59.704 54.545 5.13 5.13 0.00 4.04
243 272 1.669999 GAGCAACCACCCATCCATGC 61.670 60.000 0.00 0.00 0.00 4.06
245 274 2.044053 AACCACCCATCCATGCCG 60.044 61.111 0.00 0.00 0.00 5.69
315 425 2.433146 GGGGGCGGGAAGAGACTAC 61.433 68.421 0.00 0.00 0.00 2.73
320 430 0.245813 GCGGGAAGAGACTACGGTTT 59.754 55.000 0.00 0.00 0.00 3.27
321 431 1.992170 CGGGAAGAGACTACGGTTTG 58.008 55.000 0.00 0.00 0.00 2.93
323 433 2.685100 GGGAAGAGACTACGGTTTGTG 58.315 52.381 0.00 0.00 0.00 3.33
342 453 0.825840 GGTCTAGGAGCGAGGCAGAT 60.826 60.000 0.00 0.00 0.00 2.90
343 454 0.313672 GTCTAGGAGCGAGGCAGATG 59.686 60.000 0.00 0.00 0.00 2.90
345 456 1.456518 TAGGAGCGAGGCAGATGCT 60.457 57.895 4.59 0.00 42.73 3.79
346 457 1.045350 TAGGAGCGAGGCAGATGCTT 61.045 55.000 4.59 0.00 39.49 3.91
347 458 1.451028 GGAGCGAGGCAGATGCTTT 60.451 57.895 4.59 0.00 39.49 3.51
348 459 1.435408 GGAGCGAGGCAGATGCTTTC 61.435 60.000 4.59 2.73 39.49 2.62
349 460 0.461693 GAGCGAGGCAGATGCTTTCT 60.462 55.000 4.59 0.00 39.49 2.52
350 461 0.826715 AGCGAGGCAGATGCTTTCTA 59.173 50.000 4.59 0.00 41.70 2.10
354 472 3.547613 GCGAGGCAGATGCTTTCTATTTG 60.548 47.826 4.59 0.00 41.70 2.32
426 544 7.505248 TGTCAAATGCCATATGAATTAGCCTAA 59.495 33.333 3.65 0.00 0.00 2.69
433 551 6.265422 GCCATATGAATTAGCCTAAACCTTGT 59.735 38.462 3.65 0.00 0.00 3.16
438 556 7.490657 TGAATTAGCCTAAACCTTGTCTAGA 57.509 36.000 0.00 0.00 0.00 2.43
445 563 5.471257 CCTAAACCTTGTCTAGACTGTGAC 58.529 45.833 23.01 0.00 0.00 3.67
447 565 5.353394 AAACCTTGTCTAGACTGTGACAA 57.647 39.130 23.01 18.44 46.73 3.18
448 566 4.323553 ACCTTGTCTAGACTGTGACAAC 57.676 45.455 23.01 0.00 44.89 3.32
532 651 6.676189 AGAGGAGAGATCCCTTCAAAAATAGT 59.324 38.462 0.00 0.00 33.36 2.12
541 660 7.775053 TCCCTTCAAAAATAGTTGTATGCTT 57.225 32.000 0.00 0.00 0.00 3.91
553 672 3.070476 TGTATGCTTCTTGATGTGGCA 57.930 42.857 0.00 0.00 37.32 4.92
602 721 5.018695 CGAAAGAATAGTTCGCTTTGTGT 57.981 39.130 0.00 0.00 41.13 3.72
606 725 5.597813 AGAATAGTTCGCTTTGTGTTCAG 57.402 39.130 0.00 0.00 34.02 3.02
647 766 3.946201 ACTGCAGCTGACGCCCTT 61.946 61.111 20.43 0.00 36.60 3.95
682 2201 2.352814 GCTCGAGCTCAACTCCACTAAA 60.353 50.000 29.88 0.00 43.01 1.85
704 2223 3.454812 ACAAGCGAGGTGGGACTAATAAT 59.545 43.478 0.00 0.00 0.00 1.28
711 2235 5.625150 GAGGTGGGACTAATAATCATGCTT 58.375 41.667 0.00 0.00 0.00 3.91
740 2264 2.358615 TCCACTGCACGGCACATC 60.359 61.111 0.00 0.00 33.79 3.06
766 2290 2.607411 TACGACCGGCCCATCTACGA 62.607 60.000 0.00 0.00 0.00 3.43
773 2297 2.728817 CCCATCTACGACCTCCGC 59.271 66.667 0.00 0.00 43.32 5.54
966 2507 4.010349 ACTCTTTCCATTTCCGACAATCC 58.990 43.478 0.00 0.00 0.00 3.01
1171 2712 1.900545 CTTCCCTGGACCCCTCGTTC 61.901 65.000 0.00 0.00 0.00 3.95
1200 2741 0.652592 GTGGCGATGATCCGTTTCTG 59.347 55.000 0.00 0.00 0.00 3.02
1201 2742 0.249120 TGGCGATGATCCGTTTCTGT 59.751 50.000 0.00 0.00 0.00 3.41
1203 2744 1.359848 GCGATGATCCGTTTCTGTGT 58.640 50.000 0.00 0.00 0.00 3.72
1204 2745 1.324736 GCGATGATCCGTTTCTGTGTC 59.675 52.381 0.00 0.00 0.00 3.67
1215 2756 3.246226 CGTTTCTGTGTCTGTTTCTCTGG 59.754 47.826 0.00 0.00 0.00 3.86
1312 2853 4.065789 AGTGAGTTTTTGAATCTCCCGTC 58.934 43.478 0.00 0.00 0.00 4.79
1380 2921 3.301771 GCTGATTGCGTGTTGTTTTGTTC 60.302 43.478 0.00 0.00 0.00 3.18
1399 2940 2.187992 TCAGAGCTTGAGGAGAGCG 58.812 57.895 0.00 0.00 44.71 5.03
1595 3136 6.403866 TTGGTTGATGCTTACAGTTTGAAT 57.596 33.333 0.00 0.00 0.00 2.57
1598 3139 6.040278 TGGTTGATGCTTACAGTTTGAATTGA 59.960 34.615 0.00 0.00 0.00 2.57
1600 3141 7.274250 GGTTGATGCTTACAGTTTGAATTGATC 59.726 37.037 0.00 0.00 0.00 2.92
1601 3142 7.692460 TGATGCTTACAGTTTGAATTGATCT 57.308 32.000 0.00 0.00 0.00 2.75
1602 3143 7.532571 TGATGCTTACAGTTTGAATTGATCTG 58.467 34.615 0.00 0.00 0.00 2.90
1603 3144 6.882610 TGCTTACAGTTTGAATTGATCTGT 57.117 33.333 7.93 7.93 41.32 3.41
1607 3148 7.862372 GCTTACAGTTTGAATTGATCTGTTTGA 59.138 33.333 8.08 0.00 39.54 2.69
1608 3149 9.173939 CTTACAGTTTGAATTGATCTGTTTGAC 57.826 33.333 8.08 0.00 39.54 3.18
1610 3151 8.450578 ACAGTTTGAATTGATCTGTTTGACTA 57.549 30.769 0.00 0.00 36.17 2.59
1612 3153 9.903682 CAGTTTGAATTGATCTGTTTGACTAAT 57.096 29.630 0.00 0.00 0.00 1.73
1616 3157 9.897744 TTGAATTGATCTGTTTGACTAATTGAC 57.102 29.630 0.00 0.00 0.00 3.18
1617 3158 9.288576 TGAATTGATCTGTTTGACTAATTGACT 57.711 29.630 0.00 0.00 0.00 3.41
1621 3162 9.554395 TTGATCTGTTTGACTAATTGACTTACA 57.446 29.630 0.00 0.00 0.00 2.41
1622 3163 8.988934 TGATCTGTTTGACTAATTGACTTACAC 58.011 33.333 0.00 0.00 0.00 2.90
1623 3164 7.724305 TCTGTTTGACTAATTGACTTACACC 57.276 36.000 0.00 0.00 0.00 4.16
1635 3176 2.035961 GACTTACACCTCTGCACTGTCA 59.964 50.000 0.00 0.00 0.00 3.58
1656 3199 5.757320 GTCAATGTGGTCTTCATGGATAGAG 59.243 44.000 0.00 0.00 29.54 2.43
1663 3206 5.248248 TGGTCTTCATGGATAGAGTGTCAAA 59.752 40.000 0.00 0.00 0.00 2.69
1707 3250 3.179830 GTCGTGTTACCTGCTATGTCTG 58.820 50.000 0.00 0.00 0.00 3.51
1728 3271 7.872993 TGTCTGGATGAACTTTGTAGTTAGAAG 59.127 37.037 0.00 0.00 44.51 2.85
1734 3277 7.548196 TGAACTTTGTAGTTAGAAGGTTGTG 57.452 36.000 2.08 0.00 44.51 3.33
1752 3295 2.285024 GCTGCAATTGCCAAGGGGA 61.285 57.895 26.94 6.09 41.18 4.81
1753 3296 1.829523 GCTGCAATTGCCAAGGGGAA 61.830 55.000 26.94 5.33 41.18 3.97
1757 3300 1.072173 GCAATTGCCAAGGGGAACTTT 59.928 47.619 20.06 0.00 35.49 2.66
1758 3301 2.769893 CAATTGCCAAGGGGAACTTTG 58.230 47.619 0.00 0.00 46.22 2.77
1760 3303 1.408969 TTGCCAAGGGGAACTTTGTC 58.591 50.000 0.00 0.00 45.28 3.18
1802 3649 6.611642 TCATTTGGACTAACTACTATGCTCCT 59.388 38.462 0.00 0.00 0.00 3.69
1807 3654 6.611642 TGGACTAACTACTATGCTCCTCATTT 59.388 38.462 0.00 0.00 36.63 2.32
1812 3659 6.274157 ACTACTATGCTCCTCATTTATCGG 57.726 41.667 0.00 0.00 36.63 4.18
1815 3662 1.953559 TGCTCCTCATTTATCGGTGC 58.046 50.000 0.00 0.00 37.71 5.01
1821 3668 3.572682 TCCTCATTTATCGGTGCGACTAT 59.427 43.478 0.00 0.00 39.18 2.12
1823 3670 5.242171 TCCTCATTTATCGGTGCGACTATTA 59.758 40.000 0.00 0.00 39.18 0.98
1898 3759 8.852135 TCATCCGTCTTTTAAATACCTTTTTGT 58.148 29.630 0.00 0.00 0.00 2.83
2003 3865 4.032786 GCATGCCATAAAAATTTCCACGAC 59.967 41.667 6.36 0.00 0.00 4.34
2015 3877 0.032952 TCCACGACAAGTACACTGCC 59.967 55.000 0.00 0.00 0.00 4.85
2060 3922 3.068448 ACATTTGCTGAAGTCAATGTGCA 59.932 39.130 7.88 0.00 0.00 4.57
2108 3970 9.449719 GACTTTTTAGATCCCATCTGAACTTTA 57.550 33.333 0.00 0.00 40.51 1.85
2119 3981 6.376978 CCATCTGAACTTTAAGACTTTGCAG 58.623 40.000 0.00 0.00 0.00 4.41
2150 4012 5.823209 TGAAAGATCATGCTGTACAATGG 57.177 39.130 7.52 0.00 0.00 3.16
2198 4060 4.576216 ATGTCGCATAGGTAGTTCTGAG 57.424 45.455 0.00 0.00 0.00 3.35
2253 4115 0.629058 TTACCTTTCCCCATCAGGCC 59.371 55.000 0.00 0.00 0.00 5.19
2335 4197 6.151985 TCCACTTCAACTTTTAGTCTTTGCAA 59.848 34.615 0.00 0.00 0.00 4.08
2352 4214 8.470002 GTCTTTGCAAAATTATATCAAGGACCT 58.530 33.333 13.84 0.00 37.61 3.85
2374 4236 8.263854 ACCTTGCTATACAATGTATAACCTCT 57.736 34.615 13.41 0.00 35.62 3.69
2460 4322 8.316497 TGAAATATATTGCCCATCTTTTCCAA 57.684 30.769 0.00 0.00 0.00 3.53
2484 4346 1.892474 TGCATTTGGGCTAGGTTGTTC 59.108 47.619 0.00 0.00 34.04 3.18
2534 4397 4.646040 TGGCCAATAGGTCATCATTTCAAG 59.354 41.667 0.61 0.00 46.77 3.02
2537 4400 6.268566 GCCAATAGGTCATCATTTCAAGTTC 58.731 40.000 0.00 0.00 37.19 3.01
2555 4418 3.220999 CTCAACACCCTGCCGACGA 62.221 63.158 0.00 0.00 0.00 4.20
2557 4420 1.890041 CAACACCCTGCCGACGAAA 60.890 57.895 0.00 0.00 0.00 3.46
2565 4428 2.287915 CCCTGCCGACGAAATATTTCTG 59.712 50.000 22.52 18.09 35.07 3.02
2574 4438 7.908601 GCCGACGAAATATTTCTGAAATAGTTT 59.091 33.333 26.76 22.53 40.49 2.66
2639 4503 2.738846 CGTGAGAGGAAGTGGTGAAATG 59.261 50.000 0.00 0.00 0.00 2.32
2660 4524 4.264253 TGTATTGTCTGCCTTTCTCCATG 58.736 43.478 0.00 0.00 0.00 3.66
2691 4565 1.664321 CGGAGAGGTGGTTAGGTCCG 61.664 65.000 0.00 0.00 40.86 4.79
2731 4605 9.670442 TTAGGATTACAACCTTCAGATATAGGT 57.330 33.333 0.00 0.00 46.58 3.08
2739 4613 6.909550 ACCTTCAGATATAGGTCATGTCTC 57.090 41.667 0.00 0.00 40.78 3.36
2744 4618 6.605119 TCAGATATAGGTCATGTCTCACTGA 58.395 40.000 0.00 0.00 33.14 3.41
2847 4728 3.433306 TTGGCATAGTTAGCACCAACT 57.567 42.857 0.00 4.17 41.56 3.16
2947 4828 8.721478 AGATATTGTTACACTTAACTGTTGCAG 58.279 33.333 2.69 1.84 38.78 4.41
3156 5037 9.422196 GTATTGTCGTATTGAGTTTATCTTTGC 57.578 33.333 0.00 0.00 0.00 3.68
3180 5061 8.514594 TGCGATCTTCTTTTCATAAAAATCACT 58.485 29.630 0.00 0.00 34.00 3.41
3298 5182 6.342338 TGTCTGAAGGGTAAAGAACTACTC 57.658 41.667 0.00 0.00 0.00 2.59
3299 5183 5.245526 TGTCTGAAGGGTAAAGAACTACTCC 59.754 44.000 0.00 0.00 0.00 3.85
3300 5184 4.776308 TCTGAAGGGTAAAGAACTACTCCC 59.224 45.833 0.00 0.00 32.28 4.30
3301 5185 4.759953 TGAAGGGTAAAGAACTACTCCCT 58.240 43.478 0.00 0.00 40.77 4.20
3302 5186 4.776308 TGAAGGGTAAAGAACTACTCCCTC 59.224 45.833 0.00 0.00 38.91 4.30
3303 5187 4.696040 AGGGTAAAGAACTACTCCCTCT 57.304 45.455 0.00 0.00 36.22 3.69
3304 5188 4.354662 AGGGTAAAGAACTACTCCCTCTG 58.645 47.826 0.00 0.00 36.22 3.35
3305 5189 3.118702 GGGTAAAGAACTACTCCCTCTGC 60.119 52.174 0.00 0.00 30.27 4.26
3306 5190 3.118702 GGTAAAGAACTACTCCCTCTGCC 60.119 52.174 0.00 0.00 0.00 4.85
3307 5191 2.632763 AAGAACTACTCCCTCTGCCT 57.367 50.000 0.00 0.00 0.00 4.75
3308 5192 2.153034 AGAACTACTCCCTCTGCCTC 57.847 55.000 0.00 0.00 0.00 4.70
3309 5193 1.359474 AGAACTACTCCCTCTGCCTCA 59.641 52.381 0.00 0.00 0.00 3.86
3310 5194 2.180276 GAACTACTCCCTCTGCCTCAA 58.820 52.381 0.00 0.00 0.00 3.02
3311 5195 2.327325 ACTACTCCCTCTGCCTCAAA 57.673 50.000 0.00 0.00 0.00 2.69
3312 5196 2.621070 ACTACTCCCTCTGCCTCAAAA 58.379 47.619 0.00 0.00 0.00 2.44
3313 5197 3.185455 ACTACTCCCTCTGCCTCAAAAT 58.815 45.455 0.00 0.00 0.00 1.82
3314 5198 4.362677 ACTACTCCCTCTGCCTCAAAATA 58.637 43.478 0.00 0.00 0.00 1.40
3315 5199 4.971924 ACTACTCCCTCTGCCTCAAAATAT 59.028 41.667 0.00 0.00 0.00 1.28
3316 5200 6.143915 ACTACTCCCTCTGCCTCAAAATATA 58.856 40.000 0.00 0.00 0.00 0.86
3317 5201 5.975988 ACTCCCTCTGCCTCAAAATATAA 57.024 39.130 0.00 0.00 0.00 0.98
3318 5202 5.934781 ACTCCCTCTGCCTCAAAATATAAG 58.065 41.667 0.00 0.00 0.00 1.73
3319 5203 5.667626 ACTCCCTCTGCCTCAAAATATAAGA 59.332 40.000 0.00 0.00 0.00 2.10
3320 5204 5.930135 TCCCTCTGCCTCAAAATATAAGAC 58.070 41.667 0.00 0.00 0.00 3.01
3321 5205 4.752101 CCCTCTGCCTCAAAATATAAGACG 59.248 45.833 0.00 0.00 0.00 4.18
3322 5206 5.360591 CCTCTGCCTCAAAATATAAGACGT 58.639 41.667 0.00 0.00 0.00 4.34
3323 5207 5.817816 CCTCTGCCTCAAAATATAAGACGTT 59.182 40.000 0.00 0.00 0.00 3.99
3324 5208 6.316390 CCTCTGCCTCAAAATATAAGACGTTT 59.684 38.462 0.00 0.00 0.00 3.60
3325 5209 7.148239 CCTCTGCCTCAAAATATAAGACGTTTT 60.148 37.037 0.00 0.00 0.00 2.43
3326 5210 8.106247 TCTGCCTCAAAATATAAGACGTTTTT 57.894 30.769 0.00 0.00 0.00 1.94
3395 5308 8.773404 ATGTTGTGATCCTGTAAACTAGTAAC 57.227 34.615 0.00 0.00 0.00 2.50
3438 5356 4.051237 GTCTGAAAACCATTTTGGCTGTC 58.949 43.478 0.00 0.00 42.67 3.51
3443 5361 4.590850 AAACCATTTTGGCTGTCTCTTC 57.409 40.909 0.00 0.00 42.67 2.87
3527 5450 1.617755 GCACTGACGACCATGTCACG 61.618 60.000 0.00 0.00 43.62 4.35
3574 5497 0.320771 TCGCAGGAAAGGTCTTCAGC 60.321 55.000 0.00 0.00 0.00 4.26
3626 5549 2.943978 CGACTCGCCTTTCCCCACT 61.944 63.158 0.00 0.00 0.00 4.00
3635 5558 0.615850 CTTTCCCCACTCCTCTGGTC 59.384 60.000 0.00 0.00 0.00 4.02
3638 5561 1.229658 CCCCACTCCTCTGGTCCTT 60.230 63.158 0.00 0.00 0.00 3.36
3641 5564 1.007238 CCCACTCCTCTGGTCCTTAGA 59.993 57.143 0.00 0.00 0.00 2.10
3647 5570 2.510382 TCCTCTGGTCCTTAGAGACGAT 59.490 50.000 7.65 0.00 43.41 3.73
3656 5579 5.310451 GTCCTTAGAGACGATATCCAGACT 58.690 45.833 0.00 0.00 0.00 3.24
3719 5642 4.684134 GGGAGGGCCAGCAAGCAA 62.684 66.667 6.18 0.00 35.15 3.91
3722 5645 1.547472 GGAGGGCCAGCAAGCAATTT 61.547 55.000 6.18 0.00 0.00 1.82
3725 5648 0.607620 GGGCCAGCAAGCAATTTGTA 59.392 50.000 4.39 0.00 39.08 2.41
3792 5718 2.212794 GAGAGACGAGTCCTCCCCCA 62.213 65.000 0.00 0.00 0.00 4.96
3830 5756 2.374170 TCCCAAAAGAAGGTACCTGTCC 59.626 50.000 17.14 8.14 0.00 4.02
3860 5792 2.099431 CGAGAAGCCTCAGCAGCAC 61.099 63.158 0.00 0.00 43.56 4.40
3883 5815 1.280133 CCTTCCAGGCTCAGTGAATGA 59.720 52.381 0.00 0.00 36.21 2.57
3886 5818 3.063510 TCCAGGCTCAGTGAATGAAAG 57.936 47.619 0.00 0.00 37.52 2.62
3927 5859 1.203052 CTGCGCCATTTCTGTTCCATT 59.797 47.619 4.18 0.00 0.00 3.16
3947 5879 2.396955 CGGCAGGAAAGAGCAGCAG 61.397 63.158 0.00 0.00 0.00 4.24
3995 5966 4.954970 CAGCTTGTGGGTGGCGGT 62.955 66.667 0.00 0.00 39.52 5.68
4015 5986 2.568612 CGTCGGAGAGCTGCTGAA 59.431 61.111 7.01 0.00 36.95 3.02
4073 6044 2.029844 GTCGTGCTGGCTCAAGACC 61.030 63.158 12.45 0.00 38.79 3.85
4079 6050 1.739562 CTGGCTCAAGACCTCGTGC 60.740 63.158 0.00 0.00 0.00 5.34
4163 6140 0.329261 CCATCTTTGTGGCCTCTGGA 59.671 55.000 3.32 0.84 31.43 3.86
4260 6237 2.508300 ACCACCAAGTACAAAGAGGTGT 59.492 45.455 15.96 6.52 46.34 4.16
4265 6247 3.569701 CCAAGTACAAAGAGGTGTGCATT 59.430 43.478 0.00 0.00 36.66 3.56
4277 6259 4.922206 AGGTGTGCATTTTCCTCTAATGA 58.078 39.130 0.00 0.00 35.49 2.57
4306 6288 7.255569 TCACTTTCACGGTTATCTGTATGTAG 58.744 38.462 0.00 0.00 0.00 2.74
4314 6296 5.629849 CGGTTATCTGTATGTAGCTTACTGC 59.370 44.000 0.00 0.00 43.29 4.40
4334 6324 2.739913 GCTGTACGTGCTTGGATGTTTA 59.260 45.455 4.97 0.00 0.00 2.01
4427 6417 2.501723 ACCACACCATCAGAGGTACATC 59.498 50.000 0.00 0.00 40.77 3.06
4444 6434 3.825328 ACATCCTCCTGCATTACATTCC 58.175 45.455 0.00 0.00 0.00 3.01
4471 6468 5.635280 TGTTAGCGCTTTCAGCAGATATATC 59.365 40.000 18.68 4.42 42.58 1.63
4472 6469 4.263018 AGCGCTTTCAGCAGATATATCA 57.737 40.909 15.08 0.00 42.58 2.15
4501 6498 9.330063 GAGGAGTTAACATGAACATGATGAATA 57.670 33.333 19.56 4.21 41.20 1.75
4502 6499 9.113838 AGGAGTTAACATGAACATGATGAATAC 57.886 33.333 19.56 6.60 41.20 1.89
4503 6500 8.064222 GGAGTTAACATGAACATGATGAATACG 58.936 37.037 19.56 0.00 41.20 3.06
4504 6501 8.492673 AGTTAACATGAACATGATGAATACGT 57.507 30.769 19.56 0.00 41.20 3.57
4505 6502 9.594478 AGTTAACATGAACATGATGAATACGTA 57.406 29.630 19.56 0.00 41.20 3.57
4506 6503 9.632969 GTTAACATGAACATGATGAATACGTAC 57.367 33.333 19.56 0.00 41.20 3.67
4507 6504 9.594478 TTAACATGAACATGATGAATACGTACT 57.406 29.630 19.56 0.00 41.20 2.73
4515 6512 7.039270 ACATGATGAATACGTACTACTTTGCA 58.961 34.615 0.00 0.00 0.00 4.08
4538 6535 0.615331 GTGCCAGGAAGATCAGTGGA 59.385 55.000 0.00 0.00 31.04 4.02
4566 6563 4.361971 ACCTGGAGGAGGACGCGA 62.362 66.667 15.93 0.00 46.33 5.87
4697 6694 5.336055 GCTCTCTGAAACTGAACTAGTGCTA 60.336 44.000 1.64 0.00 40.26 3.49
4736 6733 1.373246 GCATTTTGCTTGCGCCTCA 60.373 52.632 4.18 0.00 40.96 3.86
4830 6830 2.897969 TCTGCTTCGGTTTACTCCTTCT 59.102 45.455 0.00 0.00 0.00 2.85
4841 6841 2.230130 ACTCCTTCTCTGCTAGCTGT 57.770 50.000 17.23 0.00 0.00 4.40
4842 6842 2.099405 ACTCCTTCTCTGCTAGCTGTC 58.901 52.381 17.23 0.00 0.00 3.51
5004 7005 2.737252 CGAAGTTACTCAAGGTCCTTGC 59.263 50.000 24.66 11.66 40.84 4.01
5017 7018 2.335712 CCTTGCGGGTGAAAGGCTC 61.336 63.158 0.00 0.00 44.12 4.70
5018 7019 1.302832 CTTGCGGGTGAAAGGCTCT 60.303 57.895 0.00 0.00 0.00 4.09
5043 7046 2.028420 AGTAGATTTGCGCTGCATGA 57.972 45.000 9.73 0.00 38.76 3.07
5046 7049 1.456296 AGATTTGCGCTGCATGAGAA 58.544 45.000 9.73 0.00 38.76 2.87
5093 7099 2.438975 TCGGATGGACGGTAGCGT 60.439 61.111 21.51 21.51 0.00 5.07
5095 7101 0.747644 TCGGATGGACGGTAGCGTAA 60.748 55.000 21.38 12.31 0.00 3.18
5198 7223 3.899981 CTGTGCGGCAACAGGGCTA 62.900 63.158 18.64 0.00 43.22 3.93
5217 7242 3.189702 GCTAATAACACGCCTCCAAAACA 59.810 43.478 0.00 0.00 0.00 2.83
5221 7246 1.178276 ACACGCCTCCAAAACAAACA 58.822 45.000 0.00 0.00 0.00 2.83
5295 7321 0.832135 AGACGGGCAGAGGAGTGAAA 60.832 55.000 0.00 0.00 0.00 2.69
5413 7448 4.406173 CGCGCGTCCTGTCTGTCT 62.406 66.667 24.19 0.00 0.00 3.41
5503 7551 4.117372 CGTGTCGTTTCCGAGCGC 62.117 66.667 0.00 0.00 45.26 5.92
5601 7676 2.616376 TCAATTCACTGTTTCACCGGTG 59.384 45.455 29.26 29.26 0.00 4.94
5602 7677 2.341846 ATTCACTGTTTCACCGGTGT 57.658 45.000 32.74 11.09 0.00 4.16
5604 7679 1.374560 TCACTGTTTCACCGGTGTTG 58.625 50.000 32.74 20.23 0.00 3.33
5605 7680 1.091537 CACTGTTTCACCGGTGTTGT 58.908 50.000 32.74 20.81 0.00 3.32
5606 7681 2.093606 TCACTGTTTCACCGGTGTTGTA 60.094 45.455 32.74 12.31 0.00 2.41
5607 7682 2.286833 CACTGTTTCACCGGTGTTGTAG 59.713 50.000 32.74 25.91 0.00 2.74
5620 7695 4.319177 GGTGTTGTAGCTTGTGATCTTCT 58.681 43.478 0.00 0.00 0.00 2.85
5621 7696 4.390297 GGTGTTGTAGCTTGTGATCTTCTC 59.610 45.833 0.00 0.00 0.00 2.87
5622 7697 5.233988 GTGTTGTAGCTTGTGATCTTCTCT 58.766 41.667 0.00 0.00 0.00 3.10
5623 7698 5.698545 GTGTTGTAGCTTGTGATCTTCTCTT 59.301 40.000 0.00 0.00 0.00 2.85
5624 7699 6.203723 GTGTTGTAGCTTGTGATCTTCTCTTT 59.796 38.462 0.00 0.00 0.00 2.52
5625 7700 6.767902 TGTTGTAGCTTGTGATCTTCTCTTTT 59.232 34.615 0.00 0.00 0.00 2.27
5626 7701 7.283127 TGTTGTAGCTTGTGATCTTCTCTTTTT 59.717 33.333 0.00 0.00 0.00 1.94
5644 7719 4.789095 TTTTTCGTGTCAAGACTACTGC 57.211 40.909 1.53 0.00 0.00 4.40
5645 7720 2.433868 TTCGTGTCAAGACTACTGCC 57.566 50.000 1.53 0.00 0.00 4.85
5646 7721 1.324383 TCGTGTCAAGACTACTGCCA 58.676 50.000 1.53 0.00 0.00 4.92
5647 7722 1.684450 TCGTGTCAAGACTACTGCCAA 59.316 47.619 1.53 0.00 0.00 4.52
5648 7723 2.299013 TCGTGTCAAGACTACTGCCAAT 59.701 45.455 1.53 0.00 0.00 3.16
5649 7724 2.413112 CGTGTCAAGACTACTGCCAATG 59.587 50.000 1.53 0.00 0.00 2.82
5650 7725 3.403038 GTGTCAAGACTACTGCCAATGT 58.597 45.455 1.53 0.00 0.00 2.71
5651 7726 3.815401 GTGTCAAGACTACTGCCAATGTT 59.185 43.478 1.53 0.00 0.00 2.71
5652 7727 4.275936 GTGTCAAGACTACTGCCAATGTTT 59.724 41.667 1.53 0.00 0.00 2.83
5653 7728 4.515191 TGTCAAGACTACTGCCAATGTTTC 59.485 41.667 1.53 0.00 0.00 2.78
5654 7729 4.757149 GTCAAGACTACTGCCAATGTTTCT 59.243 41.667 0.00 0.00 0.00 2.52
5655 7730 4.997395 TCAAGACTACTGCCAATGTTTCTC 59.003 41.667 0.00 0.00 0.00 2.87
5656 7731 4.899352 AGACTACTGCCAATGTTTCTCT 57.101 40.909 0.00 0.00 0.00 3.10
5657 7732 5.234466 AGACTACTGCCAATGTTTCTCTT 57.766 39.130 0.00 0.00 0.00 2.85
5658 7733 5.625150 AGACTACTGCCAATGTTTCTCTTT 58.375 37.500 0.00 0.00 0.00 2.52
5659 7734 6.064717 AGACTACTGCCAATGTTTCTCTTTT 58.935 36.000 0.00 0.00 0.00 2.27
5660 7735 6.016777 AGACTACTGCCAATGTTTCTCTTTTG 60.017 38.462 0.00 0.00 0.00 2.44
5661 7736 5.594317 ACTACTGCCAATGTTTCTCTTTTGT 59.406 36.000 0.00 0.00 0.00 2.83
5662 7737 6.770785 ACTACTGCCAATGTTTCTCTTTTGTA 59.229 34.615 0.00 0.00 0.00 2.41
5663 7738 6.463995 ACTGCCAATGTTTCTCTTTTGTAA 57.536 33.333 0.00 0.00 0.00 2.41
5664 7739 6.507023 ACTGCCAATGTTTCTCTTTTGTAAG 58.493 36.000 0.00 0.00 0.00 2.34
5665 7740 6.321181 ACTGCCAATGTTTCTCTTTTGTAAGA 59.679 34.615 0.00 0.00 38.06 2.10
5666 7741 7.106439 TGCCAATGTTTCTCTTTTGTAAGAA 57.894 32.000 0.00 0.00 39.80 2.52
5667 7742 6.978080 TGCCAATGTTTCTCTTTTGTAAGAAC 59.022 34.615 0.00 0.00 39.80 3.01
5668 7743 6.420903 GCCAATGTTTCTCTTTTGTAAGAACC 59.579 38.462 0.00 0.00 39.80 3.62
5669 7744 6.636850 CCAATGTTTCTCTTTTGTAAGAACCG 59.363 38.462 0.00 0.00 39.80 4.44
5670 7745 7.414436 CAATGTTTCTCTTTTGTAAGAACCGA 58.586 34.615 0.00 0.00 39.80 4.69
5671 7746 6.598753 TGTTTCTCTTTTGTAAGAACCGAG 57.401 37.500 0.00 0.00 39.80 4.63
5672 7747 6.110707 TGTTTCTCTTTTGTAAGAACCGAGT 58.889 36.000 0.00 0.00 39.80 4.18
5673 7748 6.257193 TGTTTCTCTTTTGTAAGAACCGAGTC 59.743 38.462 0.00 0.00 39.80 3.36
5674 7749 4.543692 TCTCTTTTGTAAGAACCGAGTCG 58.456 43.478 5.29 5.29 39.80 4.18
5675 7750 4.276678 TCTCTTTTGTAAGAACCGAGTCGA 59.723 41.667 15.64 0.00 39.80 4.20
5676 7751 5.048224 TCTCTTTTGTAAGAACCGAGTCGAT 60.048 40.000 15.64 1.72 39.80 3.59
5677 7752 4.921515 TCTTTTGTAAGAACCGAGTCGATG 59.078 41.667 15.64 0.00 37.45 3.84
5678 7753 2.273370 TGTAAGAACCGAGTCGATGC 57.727 50.000 15.64 0.00 0.00 3.91
5679 7754 1.189403 GTAAGAACCGAGTCGATGCG 58.811 55.000 15.64 0.00 0.00 4.73
5680 7755 1.089112 TAAGAACCGAGTCGATGCGA 58.911 50.000 15.64 0.00 0.00 5.10
5727 7802 8.980143 TTTTTGCATGTAAAAGAGGTAATAGC 57.020 30.769 18.99 0.00 31.80 2.97
5728 7803 7.695480 TTTGCATGTAAAAGAGGTAATAGCA 57.305 32.000 6.49 0.00 0.00 3.49
5729 7804 6.677781 TGCATGTAAAAGAGGTAATAGCAC 57.322 37.500 0.00 0.00 0.00 4.40
5730 7805 5.588648 TGCATGTAAAAGAGGTAATAGCACC 59.411 40.000 0.00 0.00 39.02 5.01
5731 7806 5.277345 GCATGTAAAAGAGGTAATAGCACCG 60.277 44.000 0.00 0.00 43.84 4.94
5732 7807 4.761975 TGTAAAAGAGGTAATAGCACCGG 58.238 43.478 0.00 0.00 43.84 5.28
5733 7808 2.327200 AAAGAGGTAATAGCACCGGC 57.673 50.000 0.00 0.00 43.84 6.13
5734 7809 1.200519 AAGAGGTAATAGCACCGGCA 58.799 50.000 0.00 0.00 43.84 5.69
5735 7810 0.753262 AGAGGTAATAGCACCGGCAG 59.247 55.000 0.00 0.00 43.84 4.85
5736 7811 0.464452 GAGGTAATAGCACCGGCAGT 59.536 55.000 0.00 0.00 43.84 4.40
5737 7812 0.464452 AGGTAATAGCACCGGCAGTC 59.536 55.000 0.00 0.00 43.84 3.51
5738 7813 0.532196 GGTAATAGCACCGGCAGTCC 60.532 60.000 0.00 0.00 44.61 3.85
5739 7814 0.464452 GTAATAGCACCGGCAGTCCT 59.536 55.000 0.00 0.00 44.61 3.85
5740 7815 0.464036 TAATAGCACCGGCAGTCCTG 59.536 55.000 0.00 0.00 44.61 3.86
5741 7816 1.264749 AATAGCACCGGCAGTCCTGA 61.265 55.000 0.00 0.00 44.61 3.86
5742 7817 1.264749 ATAGCACCGGCAGTCCTGAA 61.265 55.000 0.00 0.00 44.61 3.02
5743 7818 1.476845 TAGCACCGGCAGTCCTGAAA 61.477 55.000 0.00 0.00 44.61 2.69
5744 7819 2.617274 GCACCGGCAGTCCTGAAAC 61.617 63.158 0.00 0.00 40.72 2.78
5745 7820 1.071471 CACCGGCAGTCCTGAAACT 59.929 57.895 0.00 0.00 0.00 2.66
5746 7821 0.535102 CACCGGCAGTCCTGAAACTT 60.535 55.000 0.00 0.00 0.00 2.66
5747 7822 0.535102 ACCGGCAGTCCTGAAACTTG 60.535 55.000 0.00 0.00 0.00 3.16
5748 7823 0.535102 CCGGCAGTCCTGAAACTTGT 60.535 55.000 0.00 0.00 0.00 3.16
5749 7824 1.308998 CGGCAGTCCTGAAACTTGTT 58.691 50.000 0.00 0.00 0.00 2.83
5750 7825 1.264288 CGGCAGTCCTGAAACTTGTTC 59.736 52.381 0.00 0.00 0.00 3.18
5751 7826 2.297701 GGCAGTCCTGAAACTTGTTCA 58.702 47.619 0.00 0.00 0.00 3.18
5752 7827 2.291741 GGCAGTCCTGAAACTTGTTCAG 59.708 50.000 8.76 8.76 44.05 3.02
5760 7835 5.954296 CTGAAACTTGTTCAGGATGTGAT 57.046 39.130 7.99 0.00 41.54 3.06
5761 7836 5.694231 TGAAACTTGTTCAGGATGTGATG 57.306 39.130 0.00 0.00 37.40 3.07
5762 7837 5.375773 TGAAACTTGTTCAGGATGTGATGA 58.624 37.500 0.00 0.00 37.40 2.92
5763 7838 6.005823 TGAAACTTGTTCAGGATGTGATGAT 58.994 36.000 0.00 0.00 37.40 2.45
5764 7839 6.149973 TGAAACTTGTTCAGGATGTGATGATC 59.850 38.462 0.00 0.00 37.40 2.92
5765 7840 5.432680 ACTTGTTCAGGATGTGATGATCT 57.567 39.130 0.00 0.00 37.40 2.75
5766 7841 6.550938 ACTTGTTCAGGATGTGATGATCTA 57.449 37.500 0.00 0.00 37.40 1.98
5767 7842 6.580788 ACTTGTTCAGGATGTGATGATCTAG 58.419 40.000 0.00 0.00 37.40 2.43
5768 7843 6.155910 ACTTGTTCAGGATGTGATGATCTAGT 59.844 38.462 0.00 0.00 37.40 2.57
5769 7844 6.550938 TGTTCAGGATGTGATGATCTAGTT 57.449 37.500 0.00 0.00 37.40 2.24
5770 7845 6.577103 TGTTCAGGATGTGATGATCTAGTTC 58.423 40.000 0.00 0.00 37.40 3.01
5771 7846 6.155049 TGTTCAGGATGTGATGATCTAGTTCA 59.845 38.462 5.97 5.97 37.40 3.18
5772 7847 6.796785 TCAGGATGTGATGATCTAGTTCAA 57.203 37.500 7.56 0.00 37.40 2.69
5773 7848 7.186570 TCAGGATGTGATGATCTAGTTCAAA 57.813 36.000 7.56 0.00 37.40 2.69
5774 7849 7.623630 TCAGGATGTGATGATCTAGTTCAAAA 58.376 34.615 7.56 0.00 37.40 2.44
5775 7850 7.550551 TCAGGATGTGATGATCTAGTTCAAAAC 59.449 37.037 7.56 9.19 37.40 2.43
5776 7851 7.551974 CAGGATGTGATGATCTAGTTCAAAACT 59.448 37.037 7.56 0.00 45.40 2.66
5777 7852 8.105829 AGGATGTGATGATCTAGTTCAAAACTT 58.894 33.333 7.56 7.25 42.81 2.66
5778 7853 8.180267 GGATGTGATGATCTAGTTCAAAACTTG 58.820 37.037 7.56 0.00 42.81 3.16
5779 7854 6.902341 TGTGATGATCTAGTTCAAAACTTGC 58.098 36.000 7.56 0.00 42.81 4.01
5780 7855 6.486320 TGTGATGATCTAGTTCAAAACTTGCA 59.514 34.615 7.56 0.00 42.81 4.08
5781 7856 7.013178 TGTGATGATCTAGTTCAAAACTTGCAA 59.987 33.333 7.56 0.00 42.81 4.08
5782 7857 7.862372 GTGATGATCTAGTTCAAAACTTGCAAA 59.138 33.333 7.56 0.00 42.81 3.68
5783 7858 8.412456 TGATGATCTAGTTCAAAACTTGCAAAA 58.588 29.630 7.56 0.00 42.81 2.44
5784 7859 8.807667 ATGATCTAGTTCAAAACTTGCAAAAG 57.192 30.769 7.56 0.00 42.81 2.27
5785 7860 6.697019 TGATCTAGTTCAAAACTTGCAAAAGC 59.303 34.615 0.00 0.00 42.81 3.51
5786 7861 5.960113 TCTAGTTCAAAACTTGCAAAAGCA 58.040 33.333 0.00 0.00 42.81 3.91
5787 7862 6.393990 TCTAGTTCAAAACTTGCAAAAGCAA 58.606 32.000 0.00 2.69 42.81 3.91
5788 7863 5.938438 AGTTCAAAACTTGCAAAAGCAAA 57.062 30.435 0.00 0.00 39.04 3.68
5789 7864 5.688823 AGTTCAAAACTTGCAAAAGCAAAC 58.311 33.333 0.00 1.69 39.04 2.93
5790 7865 5.469760 AGTTCAAAACTTGCAAAAGCAAACT 59.530 32.000 0.00 4.00 39.04 2.66
5791 7866 6.648725 AGTTCAAAACTTGCAAAAGCAAACTA 59.351 30.769 0.00 0.00 39.04 2.24
5792 7867 7.334171 AGTTCAAAACTTGCAAAAGCAAACTAT 59.666 29.630 0.00 0.00 39.04 2.12
5793 7868 7.608308 TCAAAACTTGCAAAAGCAAACTATT 57.392 28.000 0.00 0.00 0.00 1.73
5794 7869 7.462731 TCAAAACTTGCAAAAGCAAACTATTG 58.537 30.769 0.00 7.54 39.65 1.90
5806 7881 4.789012 CAAACTATTGCATCCCACAACT 57.211 40.909 0.00 0.00 0.00 3.16
5807 7882 5.138125 CAAACTATTGCATCCCACAACTT 57.862 39.130 0.00 0.00 0.00 2.66
5808 7883 6.266168 CAAACTATTGCATCCCACAACTTA 57.734 37.500 0.00 0.00 0.00 2.24
5809 7884 6.866480 CAAACTATTGCATCCCACAACTTAT 58.134 36.000 0.00 0.00 0.00 1.73
5810 7885 7.995289 CAAACTATTGCATCCCACAACTTATA 58.005 34.615 0.00 0.00 0.00 0.98
5811 7886 7.568199 AACTATTGCATCCCACAACTTATAC 57.432 36.000 0.00 0.00 0.00 1.47
5812 7887 6.062095 ACTATTGCATCCCACAACTTATACC 58.938 40.000 0.00 0.00 0.00 2.73
5813 7888 3.290948 TGCATCCCACAACTTATACCC 57.709 47.619 0.00 0.00 0.00 3.69
5814 7889 2.578480 TGCATCCCACAACTTATACCCA 59.422 45.455 0.00 0.00 0.00 4.51
5815 7890 3.010696 TGCATCCCACAACTTATACCCAA 59.989 43.478 0.00 0.00 0.00 4.12
5816 7891 4.215109 GCATCCCACAACTTATACCCAAT 58.785 43.478 0.00 0.00 0.00 3.16
5817 7892 4.037923 GCATCCCACAACTTATACCCAATG 59.962 45.833 0.00 0.00 0.00 2.82
5818 7893 4.938575 TCCCACAACTTATACCCAATGT 57.061 40.909 0.00 0.00 0.00 2.71
5819 7894 4.594970 TCCCACAACTTATACCCAATGTG 58.405 43.478 0.00 0.00 38.25 3.21
5820 7895 4.043561 TCCCACAACTTATACCCAATGTGT 59.956 41.667 0.00 0.00 37.14 3.72
5821 7896 5.251005 TCCCACAACTTATACCCAATGTGTA 59.749 40.000 0.00 0.00 37.14 2.90
5822 7897 5.946972 CCCACAACTTATACCCAATGTGTAA 59.053 40.000 0.00 0.00 37.14 2.41
5823 7898 6.434652 CCCACAACTTATACCCAATGTGTAAA 59.565 38.462 0.00 0.00 37.14 2.01
5824 7899 7.123547 CCCACAACTTATACCCAATGTGTAAAT 59.876 37.037 0.00 0.00 37.14 1.40
5825 7900 8.527810 CCACAACTTATACCCAATGTGTAAATT 58.472 33.333 0.00 0.00 37.14 1.82
5826 7901 9.921637 CACAACTTATACCCAATGTGTAAATTT 57.078 29.630 0.00 0.00 34.85 1.82
5827 7902 9.921637 ACAACTTATACCCAATGTGTAAATTTG 57.078 29.630 0.00 0.00 33.87 2.32
5828 7903 9.364989 CAACTTATACCCAATGTGTAAATTTGG 57.635 33.333 0.00 0.00 39.69 3.28
5829 7904 8.658840 ACTTATACCCAATGTGTAAATTTGGT 57.341 30.769 0.00 0.00 38.66 3.67
5830 7905 8.745590 ACTTATACCCAATGTGTAAATTTGGTC 58.254 33.333 0.00 0.00 36.98 4.02
5831 7906 4.882842 ACCCAATGTGTAAATTTGGTCC 57.117 40.909 0.00 0.00 38.58 4.46
5832 7907 4.488770 ACCCAATGTGTAAATTTGGTCCT 58.511 39.130 0.00 0.00 38.58 3.85
5833 7908 5.646215 ACCCAATGTGTAAATTTGGTCCTA 58.354 37.500 0.00 0.00 38.58 2.94
5834 7909 5.714806 ACCCAATGTGTAAATTTGGTCCTAG 59.285 40.000 0.00 0.00 38.58 3.02
5835 7910 5.394115 CCCAATGTGTAAATTTGGTCCTAGC 60.394 44.000 0.00 0.00 38.58 3.42
5836 7911 5.394115 CCAATGTGTAAATTTGGTCCTAGCC 60.394 44.000 0.00 0.00 36.08 3.93
5837 7912 4.374689 TGTGTAAATTTGGTCCTAGCCA 57.625 40.909 0.00 0.00 36.62 4.75
5838 7913 4.730966 TGTGTAAATTTGGTCCTAGCCAA 58.269 39.130 0.00 0.00 45.83 4.52
5839 7914 5.329399 TGTGTAAATTTGGTCCTAGCCAAT 58.671 37.500 0.00 0.00 46.60 3.16
5840 7915 5.417580 TGTGTAAATTTGGTCCTAGCCAATC 59.582 40.000 0.00 0.00 46.60 2.67
5841 7916 5.417580 GTGTAAATTTGGTCCTAGCCAATCA 59.582 40.000 0.00 0.00 46.60 2.57
5842 7917 5.652014 TGTAAATTTGGTCCTAGCCAATCAG 59.348 40.000 0.00 0.00 46.60 2.90
5843 7918 4.591321 AATTTGGTCCTAGCCAATCAGA 57.409 40.909 3.02 0.00 46.60 3.27
5844 7919 3.350219 TTTGGTCCTAGCCAATCAGAC 57.650 47.619 3.02 0.00 46.60 3.51
5845 7920 0.824109 TGGTCCTAGCCAATCAGACG 59.176 55.000 0.00 0.00 35.25 4.18
5846 7921 1.112113 GGTCCTAGCCAATCAGACGA 58.888 55.000 0.00 0.00 0.00 4.20
5847 7922 1.202428 GGTCCTAGCCAATCAGACGAC 60.202 57.143 0.00 0.00 0.00 4.34
5848 7923 0.738975 TCCTAGCCAATCAGACGACG 59.261 55.000 0.00 0.00 0.00 5.12
5849 7924 0.738975 CCTAGCCAATCAGACGACGA 59.261 55.000 0.00 0.00 0.00 4.20
5850 7925 1.534175 CCTAGCCAATCAGACGACGAC 60.534 57.143 0.00 0.00 0.00 4.34
5851 7926 1.132453 CTAGCCAATCAGACGACGACA 59.868 52.381 0.00 0.00 0.00 4.35
5852 7927 0.317160 AGCCAATCAGACGACGACAA 59.683 50.000 0.00 0.00 0.00 3.18
5853 7928 0.716108 GCCAATCAGACGACGACAAG 59.284 55.000 0.00 0.00 0.00 3.16
5854 7929 1.935300 GCCAATCAGACGACGACAAGT 60.935 52.381 0.00 0.00 0.00 3.16
5855 7930 1.721389 CCAATCAGACGACGACAAGTG 59.279 52.381 0.00 0.00 0.00 3.16
5856 7931 1.721389 CAATCAGACGACGACAAGTGG 59.279 52.381 0.00 0.00 34.52 4.00
5857 7932 1.244816 ATCAGACGACGACAAGTGGA 58.755 50.000 0.00 0.00 32.54 4.02
5858 7933 0.591659 TCAGACGACGACAAGTGGAG 59.408 55.000 0.00 0.00 32.54 3.86
5859 7934 1.004277 CAGACGACGACAAGTGGAGC 61.004 60.000 0.00 0.00 32.54 4.70
5860 7935 1.733399 GACGACGACAAGTGGAGCC 60.733 63.158 0.00 0.00 32.54 4.70
5861 7936 2.143594 GACGACGACAAGTGGAGCCT 62.144 60.000 0.00 0.00 32.54 4.58
5862 7937 0.892358 ACGACGACAAGTGGAGCCTA 60.892 55.000 0.00 0.00 32.54 3.93
5863 7938 0.179161 CGACGACAAGTGGAGCCTAG 60.179 60.000 0.00 0.00 0.00 3.02
5864 7939 0.889306 GACGACAAGTGGAGCCTAGT 59.111 55.000 0.00 0.00 0.00 2.57
5865 7940 0.889306 ACGACAAGTGGAGCCTAGTC 59.111 55.000 0.00 0.00 0.00 2.59
5866 7941 0.888619 CGACAAGTGGAGCCTAGTCA 59.111 55.000 0.00 0.00 0.00 3.41
5867 7942 1.135257 CGACAAGTGGAGCCTAGTCAG 60.135 57.143 0.00 0.00 0.00 3.51
5868 7943 0.610687 ACAAGTGGAGCCTAGTCAGC 59.389 55.000 0.00 0.00 0.00 4.26
5869 7944 0.610174 CAAGTGGAGCCTAGTCAGCA 59.390 55.000 0.00 0.00 0.00 4.41
5870 7945 0.901124 AAGTGGAGCCTAGTCAGCAG 59.099 55.000 0.00 0.00 0.00 4.24
5871 7946 0.040351 AGTGGAGCCTAGTCAGCAGA 59.960 55.000 0.00 0.00 0.00 4.26
5872 7947 0.459489 GTGGAGCCTAGTCAGCAGAG 59.541 60.000 0.00 0.00 0.00 3.35
5873 7948 1.326213 TGGAGCCTAGTCAGCAGAGC 61.326 60.000 0.00 0.00 0.00 4.09
5874 7949 1.441311 GAGCCTAGTCAGCAGAGCC 59.559 63.158 0.00 0.00 0.00 4.70
5875 7950 2.105930 GCCTAGTCAGCAGAGCCG 59.894 66.667 0.00 0.00 0.00 5.52
5876 7951 2.811101 CCTAGTCAGCAGAGCCGG 59.189 66.667 0.00 0.00 0.00 6.13
5877 7952 2.055042 CCTAGTCAGCAGAGCCGGT 61.055 63.158 1.90 0.00 0.00 5.28
5878 7953 1.435515 CTAGTCAGCAGAGCCGGTC 59.564 63.158 1.90 0.00 0.00 4.79
5879 7954 1.304134 TAGTCAGCAGAGCCGGTCA 60.304 57.895 1.90 0.00 0.00 4.02
5880 7955 1.315981 TAGTCAGCAGAGCCGGTCAG 61.316 60.000 1.90 0.00 0.00 3.51
5881 7956 4.074526 TCAGCAGAGCCGGTCAGC 62.075 66.667 1.90 6.85 37.96 4.26
5919 7994 2.444895 CCCCCTTCTCCTCCTCGG 60.445 72.222 0.00 0.00 0.00 4.63
5920 7995 2.444895 CCCCTTCTCCTCCTCGGG 60.445 72.222 0.00 0.00 34.62 5.14
5921 7996 2.444895 CCCTTCTCCTCCTCGGGG 60.445 72.222 0.00 0.00 32.98 5.73
5922 7997 2.690452 CCTTCTCCTCCTCGGGGA 59.310 66.667 2.68 2.68 41.86 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.049063 GGTGCTCGTGCTCTCGTT 60.049 61.111 11.19 0.00 40.48 3.85
19 20 4.643387 AAGGGCGGTGTGGTGCTC 62.643 66.667 0.00 0.00 0.00 4.26
41 42 3.267860 GCTCTTGATCTGGCGCGG 61.268 66.667 8.83 0.00 0.00 6.46
76 77 2.432146 TCTCAATCTGGCGCACTAGAAT 59.568 45.455 10.83 0.00 0.00 2.40
83 84 1.093496 CATGCTCTCAATCTGGCGCA 61.093 55.000 10.83 0.00 0.00 6.09
93 94 2.611800 AGGGTGCCCATGCTCTCA 60.612 61.111 10.26 0.00 38.92 3.27
114 115 0.038744 ATCTGGTGTGGCTTGAAGGG 59.961 55.000 0.00 0.00 0.00 3.95
123 124 1.808945 GTGCTCTTTGATCTGGTGTGG 59.191 52.381 0.00 0.00 0.00 4.17
127 128 1.674221 GCTCGTGCTCTTTGATCTGGT 60.674 52.381 1.41 0.00 36.03 4.00
135 136 4.683432 GAGGTGCTCGTGCTCTTT 57.317 55.556 11.19 0.46 40.48 2.52
155 156 4.998400 TTGGCGCGCTACAAGGCA 62.998 61.111 32.29 15.77 38.69 4.75
166 168 1.278038 GATGCTCTCGATTTGGCGC 59.722 57.895 0.00 0.00 0.00 6.53
167 169 0.580578 CTGATGCTCTCGATTTGGCG 59.419 55.000 0.00 0.00 0.00 5.69
172 174 4.796946 GCTCTCAATCTGATGCTCTCGATT 60.797 45.833 0.00 0.00 31.63 3.34
190 192 2.838736 TCAAGGTTGTGAGTTGCTCTC 58.161 47.619 3.22 3.22 43.03 3.20
191 193 3.209410 CTTCAAGGTTGTGAGTTGCTCT 58.791 45.455 0.00 0.00 0.00 4.09
192 194 2.287248 GCTTCAAGGTTGTGAGTTGCTC 60.287 50.000 0.00 0.00 0.00 4.26
193 195 1.678101 GCTTCAAGGTTGTGAGTTGCT 59.322 47.619 0.00 0.00 0.00 3.91
194 196 1.678101 AGCTTCAAGGTTGTGAGTTGC 59.322 47.619 0.00 0.00 0.00 4.17
195 197 2.291741 GGAGCTTCAAGGTTGTGAGTTG 59.708 50.000 0.00 0.00 0.00 3.16
222 251 1.561769 ATGGATGGGTGGTTGCTCGA 61.562 55.000 0.00 0.00 0.00 4.04
226 255 2.724273 GGCATGGATGGGTGGTTGC 61.724 63.158 0.00 0.00 0.00 4.17
245 274 4.572571 TGGCGGTTGGTGGTGGTC 62.573 66.667 0.00 0.00 0.00 4.02
302 412 1.271656 ACAAACCGTAGTCTCTTCCCG 59.728 52.381 0.00 0.00 0.00 5.14
315 425 0.736325 CGCTCCTAGACCACAAACCG 60.736 60.000 0.00 0.00 0.00 4.44
320 430 2.052690 GCCTCGCTCCTAGACCACA 61.053 63.158 0.00 0.00 0.00 4.17
321 431 2.010582 CTGCCTCGCTCCTAGACCAC 62.011 65.000 0.00 0.00 0.00 4.16
323 433 0.825840 ATCTGCCTCGCTCCTAGACC 60.826 60.000 0.00 0.00 0.00 3.85
370 488 7.786464 AGCAATTTTTCATAGTCCCATAGGATT 59.214 33.333 0.00 0.00 46.41 3.01
374 492 7.999679 TGAAGCAATTTTTCATAGTCCCATAG 58.000 34.615 0.00 0.00 30.03 2.23
375 493 7.953005 TGAAGCAATTTTTCATAGTCCCATA 57.047 32.000 0.00 0.00 30.03 2.74
376 494 6.855763 TGAAGCAATTTTTCATAGTCCCAT 57.144 33.333 0.00 0.00 30.03 4.00
385 503 6.293516 GGCATTTGACATGAAGCAATTTTTCA 60.294 34.615 0.00 4.99 38.76 2.69
433 551 5.592104 TCAACTTGTTGTCACAGTCTAGA 57.408 39.130 12.44 0.00 33.22 2.43
438 556 5.221106 CCATTGATCAACTTGTTGTCACAGT 60.221 40.000 11.07 6.50 33.22 3.55
445 563 6.684686 AGTTCATCCATTGATCAACTTGTTG 58.315 36.000 11.07 4.61 38.99 3.33
447 565 8.408043 TTTAGTTCATCCATTGATCAACTTGT 57.592 30.769 11.07 0.00 38.99 3.16
448 566 9.865321 AATTTAGTTCATCCATTGATCAACTTG 57.135 29.630 11.07 6.17 38.99 3.16
472 590 6.989759 GGTCCCACAATTCAGTTTAACAAAAT 59.010 34.615 0.00 0.00 0.00 1.82
474 592 5.163395 GGGTCCCACAATTCAGTTTAACAAA 60.163 40.000 1.78 0.00 0.00 2.83
532 651 3.419943 TGCCACATCAAGAAGCATACAA 58.580 40.909 0.00 0.00 0.00 2.41
553 672 7.148306 CCTTTTACTAAAGAATACCGTGTGCAT 60.148 37.037 0.00 0.00 42.78 3.96
682 2201 1.276622 ATTAGTCCCACCTCGCTTGT 58.723 50.000 0.00 0.00 0.00 3.16
704 2223 2.093288 GGAGACACTGGATGAAGCATGA 60.093 50.000 0.00 0.00 0.00 3.07
751 2275 3.152400 GGTCGTAGATGGGCCGGT 61.152 66.667 1.90 0.00 40.67 5.28
783 2307 4.620982 GTTGAGTGGAAAAATGAGTTGGG 58.379 43.478 0.00 0.00 0.00 4.12
789 2313 2.034053 GTGCCGTTGAGTGGAAAAATGA 59.966 45.455 0.00 0.00 0.00 2.57
792 2316 1.464734 TGTGCCGTTGAGTGGAAAAA 58.535 45.000 0.00 0.00 0.00 1.94
793 2317 1.464734 TTGTGCCGTTGAGTGGAAAA 58.535 45.000 0.00 0.00 0.00 2.29
876 2410 7.367285 AGATTTGAAATGGAAATTCGAAACGA 58.633 30.769 0.00 0.00 34.68 3.85
941 2482 1.128692 GTCGGAAATGGAAAGAGTGCG 59.871 52.381 0.00 0.00 0.00 5.34
942 2483 2.151202 TGTCGGAAATGGAAAGAGTGC 58.849 47.619 0.00 0.00 0.00 4.40
944 2485 4.010349 GGATTGTCGGAAATGGAAAGAGT 58.990 43.478 0.00 0.00 0.00 3.24
945 2486 3.378427 GGGATTGTCGGAAATGGAAAGAG 59.622 47.826 0.00 0.00 0.00 2.85
1039 2580 1.144936 GTGGCCGAGAGAATCCTGG 59.855 63.158 0.00 0.00 33.66 4.45
1193 2734 3.246226 CCAGAGAAACAGACACAGAAACG 59.754 47.826 0.00 0.00 0.00 3.60
1200 2741 1.869767 CTGCACCAGAGAAACAGACAC 59.130 52.381 0.00 0.00 32.44 3.67
1201 2742 1.202687 CCTGCACCAGAGAAACAGACA 60.203 52.381 0.00 0.00 32.44 3.41
1203 2744 1.423584 TCCTGCACCAGAGAAACAGA 58.576 50.000 0.00 0.00 32.44 3.41
1204 2745 2.354259 GATCCTGCACCAGAGAAACAG 58.646 52.381 0.00 0.00 32.44 3.16
1215 2756 2.887568 CACGAGCGGATCCTGCAC 60.888 66.667 24.07 18.63 33.85 4.57
1253 2794 2.525629 TGGTCGTCCAGGAAGGCA 60.526 61.111 9.39 0.00 39.03 4.75
1418 2959 3.830192 CCCCTCCGTCGTTACCGG 61.830 72.222 0.00 0.00 46.83 5.28
1472 3013 0.663153 ACAGGAAAGCGTTTGCAGTC 59.337 50.000 0.00 0.00 46.23 3.51
1473 3014 1.102978 AACAGGAAAGCGTTTGCAGT 58.897 45.000 0.00 0.00 46.23 4.40
1474 3015 2.119457 GAAACAGGAAAGCGTTTGCAG 58.881 47.619 0.00 0.00 46.23 4.41
1475 3016 1.748493 AGAAACAGGAAAGCGTTTGCA 59.252 42.857 0.00 0.00 46.23 4.08
1476 3017 2.119457 CAGAAACAGGAAAGCGTTTGC 58.881 47.619 0.00 0.00 43.24 3.68
1477 3018 3.108144 CACAGAAACAGGAAAGCGTTTG 58.892 45.455 0.00 0.00 35.53 2.93
1480 3021 2.038387 ACACAGAAACAGGAAAGCGT 57.962 45.000 0.00 0.00 0.00 5.07
1506 3047 2.447887 CGGAGCAGCGCACAGTTAG 61.448 63.158 11.47 0.00 0.00 2.34
1507 3048 2.432456 CGGAGCAGCGCACAGTTA 60.432 61.111 11.47 0.00 0.00 2.24
1518 3059 1.813859 CCTGAATACCGACGGAGCA 59.186 57.895 23.38 11.26 0.00 4.26
1595 3136 9.554395 TGTAAGTCAATTAGTCAAACAGATCAA 57.446 29.630 0.00 0.00 0.00 2.57
1598 3139 8.157476 AGGTGTAAGTCAATTAGTCAAACAGAT 58.843 33.333 0.00 0.00 0.00 2.90
1600 3141 7.657761 AGAGGTGTAAGTCAATTAGTCAAACAG 59.342 37.037 0.00 0.00 0.00 3.16
1601 3142 7.441157 CAGAGGTGTAAGTCAATTAGTCAAACA 59.559 37.037 0.00 0.00 0.00 2.83
1602 3143 7.571428 GCAGAGGTGTAAGTCAATTAGTCAAAC 60.571 40.741 0.00 0.00 0.00 2.93
1603 3144 6.426937 GCAGAGGTGTAAGTCAATTAGTCAAA 59.573 38.462 0.00 0.00 0.00 2.69
1607 3148 5.012148 AGTGCAGAGGTGTAAGTCAATTAGT 59.988 40.000 0.00 0.00 0.00 2.24
1608 3149 5.349817 CAGTGCAGAGGTGTAAGTCAATTAG 59.650 44.000 0.00 0.00 0.00 1.73
1610 3151 4.067896 CAGTGCAGAGGTGTAAGTCAATT 58.932 43.478 0.00 0.00 0.00 2.32
1612 3153 2.434336 ACAGTGCAGAGGTGTAAGTCAA 59.566 45.455 0.00 0.00 0.00 3.18
1614 3155 2.035961 TGACAGTGCAGAGGTGTAAGTC 59.964 50.000 0.00 0.00 0.00 3.01
1615 3156 2.039418 TGACAGTGCAGAGGTGTAAGT 58.961 47.619 0.00 0.00 0.00 2.24
1616 3157 2.820059 TGACAGTGCAGAGGTGTAAG 57.180 50.000 0.00 0.00 0.00 2.34
1617 3158 3.181455 ACATTGACAGTGCAGAGGTGTAA 60.181 43.478 0.00 0.00 0.00 2.41
1618 3159 2.368548 ACATTGACAGTGCAGAGGTGTA 59.631 45.455 0.00 0.00 0.00 2.90
1621 3162 1.544093 CCACATTGACAGTGCAGAGGT 60.544 52.381 0.00 0.00 35.69 3.85
1622 3163 1.162698 CCACATTGACAGTGCAGAGG 58.837 55.000 0.00 0.00 35.69 3.69
1623 3164 1.802960 GACCACATTGACAGTGCAGAG 59.197 52.381 0.00 0.00 35.69 3.35
1635 3176 5.190528 ACACTCTATCCATGAAGACCACATT 59.809 40.000 0.00 0.00 0.00 2.71
1675 3218 4.857588 CAGGTAACACGACACAGAGAATAC 59.142 45.833 0.00 0.00 41.41 1.89
1683 3226 2.297880 ACATAGCAGGTAACACGACACA 59.702 45.455 0.00 0.00 41.41 3.72
1684 3227 2.921754 GACATAGCAGGTAACACGACAC 59.078 50.000 0.00 0.00 41.41 3.67
1685 3228 2.823747 AGACATAGCAGGTAACACGACA 59.176 45.455 0.00 0.00 41.41 4.35
1707 3250 7.444487 ACAACCTTCTAACTACAAAGTTCATCC 59.556 37.037 0.00 0.00 42.42 3.51
1728 3271 0.532417 TTGGCAATTGCAGCACAACC 60.532 50.000 30.32 11.90 42.27 3.77
1734 3277 1.829523 TTCCCCTTGGCAATTGCAGC 61.830 55.000 30.32 15.47 44.36 5.25
1752 3295 7.309920 ACAAAAGTAACATCAACGACAAAGTT 58.690 30.769 0.00 0.00 34.15 2.66
1753 3296 6.848451 ACAAAAGTAACATCAACGACAAAGT 58.152 32.000 0.00 0.00 0.00 2.66
1757 3300 6.612247 ATGACAAAAGTAACATCAACGACA 57.388 33.333 0.00 0.00 0.00 4.35
1758 3301 7.096640 CCAAATGACAAAAGTAACATCAACGAC 60.097 37.037 0.00 0.00 0.00 4.34
1760 3303 6.915300 TCCAAATGACAAAAGTAACATCAACG 59.085 34.615 0.00 0.00 0.00 4.10
1802 3649 7.439955 ACATTTAATAGTCGCACCGATAAATGA 59.560 33.333 23.68 1.50 41.89 2.57
1807 3654 6.274579 TGAACATTTAATAGTCGCACCGATA 58.725 36.000 0.00 0.00 38.42 2.92
1812 3659 5.350365 TCCACTGAACATTTAATAGTCGCAC 59.650 40.000 0.00 0.00 0.00 5.34
1815 3662 7.904977 CACATTCCACTGAACATTTAATAGTCG 59.095 37.037 0.00 0.00 32.13 4.18
1821 3668 8.908903 ACTTTACACATTCCACTGAACATTTAA 58.091 29.630 0.00 0.00 32.13 1.52
1823 3670 7.346751 ACTTTACACATTCCACTGAACATTT 57.653 32.000 0.00 0.00 32.13 2.32
1877 3724 9.894439 CACAAACAAAAAGGTATTTAAAAGACG 57.106 29.630 0.00 0.00 0.00 4.18
1982 3844 5.398603 TGTCGTGGAAATTTTTATGGCAT 57.601 34.783 4.88 4.88 0.00 4.40
2003 3865 2.029020 TGCTAGACTGGCAGTGTACTTG 60.029 50.000 27.45 17.07 34.56 3.16
2108 3970 9.507329 TCTTTCAATATACTTCTGCAAAGTCTT 57.493 29.630 14.76 8.83 0.00 3.01
2172 4034 6.022208 CAGAACTACCTATGCGACATATACG 58.978 44.000 0.00 0.00 0.00 3.06
2236 4098 1.442886 TTGGCCTGATGGGGAAAGGT 61.443 55.000 3.32 0.00 33.34 3.50
2253 4115 1.952296 ACAGACTTCAGCAAAGCCTTG 59.048 47.619 0.00 0.00 38.67 3.61
2301 4163 9.586435 ACTAAAAGTTGAAGTGGAATTGAAAAG 57.414 29.630 0.00 0.00 0.00 2.27
2374 4236 5.923204 ACAATGCACATGGAAAACCTTTAA 58.077 33.333 0.00 0.00 0.00 1.52
2385 4247 7.442062 TCTGAACTACATATACAATGCACATGG 59.558 37.037 0.00 0.00 0.00 3.66
2387 4249 8.962884 TTCTGAACTACATATACAATGCACAT 57.037 30.769 0.00 0.00 0.00 3.21
2447 4309 7.254227 CAAATGCATATTTGGAAAAGATGGG 57.746 36.000 0.00 0.00 45.99 4.00
2460 4322 4.289245 ACAACCTAGCCCAAATGCATATT 58.711 39.130 0.00 0.00 0.00 1.28
2475 4337 2.268762 TGCATGCACAGAACAACCTA 57.731 45.000 18.46 0.00 0.00 3.08
2484 4346 4.598406 TCGTATTAAGTTGCATGCACAG 57.402 40.909 22.58 4.19 0.00 3.66
2534 4397 1.070786 TCGGCAGGGTGTTGAGAAC 59.929 57.895 0.00 0.00 0.00 3.01
2537 4400 2.709125 TTCGTCGGCAGGGTGTTGAG 62.709 60.000 0.00 0.00 0.00 3.02
2565 4428 8.626093 AGATCGACGTAGGTTAAAACTATTTC 57.374 34.615 0.00 0.00 0.00 2.17
2574 4438 4.095483 GGACTTGAGATCGACGTAGGTTAA 59.905 45.833 0.00 0.00 0.00 2.01
2639 4503 4.517285 TCATGGAGAAAGGCAGACAATAC 58.483 43.478 0.00 0.00 0.00 1.89
2660 4524 3.254892 CACCTCTCCGAAGTTTAAGCTC 58.745 50.000 0.00 0.00 0.00 4.09
2717 4591 6.493115 AGTGAGACATGACCTATATCTGAAGG 59.507 42.308 0.00 0.00 38.93 3.46
2731 4605 7.229106 TGAAATTTGACAATCAGTGAGACATGA 59.771 33.333 0.00 0.00 0.00 3.07
2739 4613 6.323203 AGACCTGAAATTTGACAATCAGTG 57.677 37.500 13.59 9.07 38.06 3.66
2744 4618 6.435277 ACTGCATAGACCTGAAATTTGACAAT 59.565 34.615 0.00 0.00 0.00 2.71
2863 4744 6.330004 TCAAGCAAATGAGCATTACAGAAA 57.670 33.333 0.00 0.00 36.85 2.52
2937 4818 0.393808 AACACGGACCTGCAACAGTT 60.394 50.000 0.00 0.00 0.00 3.16
2947 4828 7.747799 GCTAAGTTTTAAAAGATAACACGGACC 59.252 37.037 0.00 0.00 0.00 4.46
3149 5030 9.912634 TTTTTATGAAAAGAAGATCGCAAAGAT 57.087 25.926 0.00 0.00 34.98 2.40
3156 5037 9.831737 ACAGTGATTTTTATGAAAAGAAGATCG 57.168 29.630 0.00 0.00 38.09 3.69
3298 5182 4.752101 CGTCTTATATTTTGAGGCAGAGGG 59.248 45.833 0.00 0.00 0.00 4.30
3299 5183 5.360591 ACGTCTTATATTTTGAGGCAGAGG 58.639 41.667 0.00 0.00 0.00 3.69
3300 5184 6.910536 AACGTCTTATATTTTGAGGCAGAG 57.089 37.500 0.00 0.00 0.00 3.35
3301 5185 7.681939 AAAACGTCTTATATTTTGAGGCAGA 57.318 32.000 0.00 0.00 0.00 4.26
3330 5214 2.874701 CTCCCTTTGACACTGTTCAGTG 59.125 50.000 25.27 25.27 44.74 3.66
3331 5215 2.505819 ACTCCCTTTGACACTGTTCAGT 59.494 45.455 0.00 0.00 0.00 3.41
3332 5216 3.199880 ACTCCCTTTGACACTGTTCAG 57.800 47.619 0.00 0.00 0.00 3.02
3333 5217 3.181458 GGTACTCCCTTTGACACTGTTCA 60.181 47.826 0.00 0.00 0.00 3.18
3334 5218 3.181458 TGGTACTCCCTTTGACACTGTTC 60.181 47.826 0.00 0.00 0.00 3.18
3335 5219 2.775384 TGGTACTCCCTTTGACACTGTT 59.225 45.455 0.00 0.00 0.00 3.16
3336 5220 2.404559 TGGTACTCCCTTTGACACTGT 58.595 47.619 0.00 0.00 0.00 3.55
3337 5221 3.261897 AGATGGTACTCCCTTTGACACTG 59.738 47.826 0.00 0.00 0.00 3.66
3338 5222 3.521727 AGATGGTACTCCCTTTGACACT 58.478 45.455 0.00 0.00 0.00 3.55
3339 5223 3.983044 AGATGGTACTCCCTTTGACAC 57.017 47.619 0.00 0.00 0.00 3.67
3340 5224 5.529289 AGATAGATGGTACTCCCTTTGACA 58.471 41.667 0.00 0.00 0.00 3.58
3341 5225 5.011227 GGAGATAGATGGTACTCCCTTTGAC 59.989 48.000 0.00 0.00 41.89 3.18
3342 5226 5.148502 GGAGATAGATGGTACTCCCTTTGA 58.851 45.833 0.00 0.00 41.89 2.69
3343 5227 4.901849 TGGAGATAGATGGTACTCCCTTTG 59.098 45.833 0.00 0.00 45.61 2.77
3344 5228 5.157770 TGGAGATAGATGGTACTCCCTTT 57.842 43.478 0.00 0.00 45.61 3.11
3345 5229 4.834406 TGGAGATAGATGGTACTCCCTT 57.166 45.455 0.00 0.00 45.61 3.95
3346 5230 4.358310 TCATGGAGATAGATGGTACTCCCT 59.642 45.833 0.00 0.00 45.61 4.20
3347 5231 4.678256 TCATGGAGATAGATGGTACTCCC 58.322 47.826 0.00 0.00 45.61 4.30
3348 5232 6.212388 ACATTCATGGAGATAGATGGTACTCC 59.788 42.308 0.00 0.00 46.16 3.85
3349 5233 7.238486 ACATTCATGGAGATAGATGGTACTC 57.762 40.000 0.00 0.00 0.00 2.59
3350 5234 7.071698 ACAACATTCATGGAGATAGATGGTACT 59.928 37.037 0.00 0.00 0.00 2.73
3395 5308 7.928167 TCAGACCAGCTAACAATAGTTATCATG 59.072 37.037 0.00 0.00 39.36 3.07
3401 5314 6.206829 GGTTTTCAGACCAGCTAACAATAGTT 59.793 38.462 0.00 0.00 39.57 2.24
3438 5356 3.545703 AGTTGAACCTGTGTTGGAAGAG 58.454 45.455 0.00 0.00 33.97 2.85
3443 5361 0.944386 CGGAGTTGAACCTGTGTTGG 59.056 55.000 0.00 0.00 33.97 3.77
3527 5450 2.464459 CGGCGCTGATTCAACCTCC 61.464 63.158 11.90 0.00 0.00 4.30
3574 5497 2.121948 TCTGGTTCCTGATGATCTGGG 58.878 52.381 16.90 8.31 36.30 4.45
3626 5549 1.914108 TCGTCTCTAAGGACCAGAGGA 59.086 52.381 8.59 3.97 40.04 3.71
3635 5558 4.698304 GGAGTCTGGATATCGTCTCTAAGG 59.302 50.000 0.00 0.00 0.00 2.69
3638 5561 4.900684 CAGGAGTCTGGATATCGTCTCTA 58.099 47.826 0.00 0.00 37.36 2.43
3719 5642 3.387050 GTCTCAGGACGGGGTATACAAAT 59.613 47.826 5.01 0.00 32.47 2.32
3722 5645 1.410648 GGTCTCAGGACGGGGTATACA 60.411 57.143 5.01 0.00 42.97 2.29
3725 5648 1.075450 GGGTCTCAGGACGGGGTAT 60.075 63.158 0.00 0.00 42.97 2.73
3792 5718 2.039624 AGGGTGAGAGGCGACCAT 59.960 61.111 0.00 0.00 33.48 3.55
3830 5756 1.424493 GCTTCTCGGTGGAATCTGCG 61.424 60.000 0.00 0.00 0.00 5.18
3886 5818 1.067000 ACTCTGATGACAGCTCTGTGC 60.067 52.381 7.33 0.00 45.05 4.57
3927 5859 2.665000 CTGCTCTTTCCTGCCGGA 59.335 61.111 5.05 0.00 37.60 5.14
3947 5879 3.118482 TGACATTCTCATCCTCTTGAGCC 60.118 47.826 0.00 0.00 42.37 4.70
4015 5986 1.587054 CCGTTCTCCGAGCTCTTGT 59.413 57.895 12.85 0.00 39.56 3.16
4058 6029 1.739562 CGAGGTCTTGAGCCAGCAC 60.740 63.158 0.00 0.00 0.00 4.40
4073 6044 4.794439 TCACCATCCGCGCACGAG 62.794 66.667 8.75 0.00 43.93 4.18
4079 6050 3.723235 CTCACCCTCACCATCCGCG 62.723 68.421 0.00 0.00 0.00 6.46
4163 6140 1.410004 TCTCGTTGTCCCAGTTCAGT 58.590 50.000 0.00 0.00 0.00 3.41
4260 6237 6.005066 TGAGGATCATTAGAGGAAAATGCA 57.995 37.500 0.00 0.00 42.56 3.96
4277 6259 4.223032 ACAGATAACCGTGAAAGTGAGGAT 59.777 41.667 0.00 0.00 0.00 3.24
4306 6288 1.126846 CAAGCACGTACAGCAGTAAGC 59.873 52.381 9.63 2.46 46.19 3.09
4314 6296 3.743911 TGTAAACATCCAAGCACGTACAG 59.256 43.478 0.00 0.00 0.00 2.74
4334 6324 1.967066 CAGTTCACTCTCTGGTCCTGT 59.033 52.381 0.00 0.00 0.00 4.00
4367 6357 1.107114 TCATCAGCCTCTCCTCGAAC 58.893 55.000 0.00 0.00 0.00 3.95
4427 6417 1.496429 AGGGGAATGTAATGCAGGAGG 59.504 52.381 0.00 0.00 0.00 4.30
4471 6468 5.934043 TCATGTTCATGTTAACTCCTCTGTG 59.066 40.000 7.22 0.00 0.00 3.66
4472 6469 6.114187 TCATGTTCATGTTAACTCCTCTGT 57.886 37.500 7.22 0.00 0.00 3.41
4538 6535 0.622665 CCTCCAGGTGGATCAGCTTT 59.377 55.000 0.55 0.00 44.46 3.51
4566 6563 1.826024 CACTTGCCGGGCTCTCTAT 59.174 57.895 21.46 0.00 0.00 1.98
4676 6673 6.019779 AGTAGCACTAGTTCAGTTTCAGAG 57.980 41.667 0.00 0.00 34.26 3.35
4697 6694 3.589988 CTTCAGCGGACAAGAATGTAGT 58.410 45.455 0.00 0.00 40.74 2.73
4830 6830 0.684479 ATCACGGGACAGCTAGCAGA 60.684 55.000 18.83 1.87 0.00 4.26
4841 6841 4.402528 CCCAACGGCATCACGGGA 62.403 66.667 0.00 0.00 39.44 5.14
4842 6842 4.715523 ACCCAACGGCATCACGGG 62.716 66.667 0.00 0.00 43.02 5.28
4875 6876 4.218686 GCACCCACCACCACCCTT 62.219 66.667 0.00 0.00 0.00 3.95
4968 6969 2.537143 ACTTCGGTTACTGTGGGAGAT 58.463 47.619 0.00 0.00 0.00 2.75
5004 7005 2.691409 TATCAAGAGCCTTTCACCCG 57.309 50.000 0.00 0.00 0.00 5.28
5015 7016 5.557893 GCAGCGCAAATCTACTTATCAAGAG 60.558 44.000 11.47 0.00 0.00 2.85
5017 7018 4.034394 TGCAGCGCAAATCTACTTATCAAG 59.966 41.667 11.47 0.00 34.76 3.02
5018 7019 3.938334 TGCAGCGCAAATCTACTTATCAA 59.062 39.130 11.47 0.00 34.76 2.57
5093 7099 0.393808 GCTGGAAATCGGTGCCCTTA 60.394 55.000 0.00 0.00 0.00 2.69
5095 7101 2.044946 GCTGGAAATCGGTGCCCT 60.045 61.111 0.00 0.00 0.00 5.19
5143 7164 1.349259 CTTCGCCATTTGCAGCTTGC 61.349 55.000 0.00 1.70 45.29 4.01
5147 7168 2.090524 GTGCTTCGCCATTTGCAGC 61.091 57.895 0.00 0.00 41.33 5.25
5198 7223 4.142138 TGTTTGTTTTGGAGGCGTGTTATT 60.142 37.500 0.00 0.00 0.00 1.40
5217 7242 5.089970 TGATCGATCTTGGATCTGTGTTT 57.910 39.130 25.02 0.00 40.71 2.83
5221 7246 4.403752 TGAGTTGATCGATCTTGGATCTGT 59.596 41.667 25.02 1.15 40.71 3.41
5295 7321 1.068954 GGACTAGACGACGACGGTTTT 60.069 52.381 12.58 0.00 44.46 2.43
5555 7616 0.037046 TGATCATGATCGGCCCATCG 60.037 55.000 26.52 0.00 40.63 3.84
5601 7676 6.793492 AAAGAGAAGATCACAAGCTACAAC 57.207 37.500 0.00 0.00 0.00 3.32
5602 7677 7.807977 AAAAAGAGAAGATCACAAGCTACAA 57.192 32.000 0.00 0.00 0.00 2.41
5623 7698 3.558418 GGCAGTAGTCTTGACACGAAAAA 59.442 43.478 3.49 0.00 0.00 1.94
5624 7699 3.128349 GGCAGTAGTCTTGACACGAAAA 58.872 45.455 3.49 0.00 0.00 2.29
5625 7700 2.101750 TGGCAGTAGTCTTGACACGAAA 59.898 45.455 3.49 0.00 0.00 3.46
5626 7701 1.684450 TGGCAGTAGTCTTGACACGAA 59.316 47.619 3.49 0.00 0.00 3.85
5627 7702 1.324383 TGGCAGTAGTCTTGACACGA 58.676 50.000 3.49 0.00 0.00 4.35
5628 7703 2.148916 TTGGCAGTAGTCTTGACACG 57.851 50.000 3.49 0.00 0.00 4.49
5629 7704 3.403038 ACATTGGCAGTAGTCTTGACAC 58.597 45.455 3.49 0.42 0.00 3.67
5630 7705 3.769739 ACATTGGCAGTAGTCTTGACA 57.230 42.857 3.49 0.00 0.00 3.58
5631 7706 4.757149 AGAAACATTGGCAGTAGTCTTGAC 59.243 41.667 0.00 0.00 0.00 3.18
5632 7707 4.973168 AGAAACATTGGCAGTAGTCTTGA 58.027 39.130 0.00 0.00 0.00 3.02
5633 7708 4.999950 AGAGAAACATTGGCAGTAGTCTTG 59.000 41.667 0.00 0.00 0.00 3.02
5634 7709 5.234466 AGAGAAACATTGGCAGTAGTCTT 57.766 39.130 0.00 0.00 0.00 3.01
5635 7710 4.899352 AGAGAAACATTGGCAGTAGTCT 57.101 40.909 0.00 0.00 0.00 3.24
5636 7711 5.948992 AAAGAGAAACATTGGCAGTAGTC 57.051 39.130 0.00 0.00 0.00 2.59
5637 7712 5.594317 ACAAAAGAGAAACATTGGCAGTAGT 59.406 36.000 0.00 0.00 0.00 2.73
5638 7713 6.076981 ACAAAAGAGAAACATTGGCAGTAG 57.923 37.500 0.00 0.00 0.00 2.57
5639 7714 7.500892 TCTTACAAAAGAGAAACATTGGCAGTA 59.499 33.333 0.00 0.00 36.80 2.74
5640 7715 6.321181 TCTTACAAAAGAGAAACATTGGCAGT 59.679 34.615 0.00 0.00 36.80 4.40
5641 7716 6.738114 TCTTACAAAAGAGAAACATTGGCAG 58.262 36.000 0.00 0.00 36.80 4.85
5642 7717 6.707440 TCTTACAAAAGAGAAACATTGGCA 57.293 33.333 0.00 0.00 36.80 4.92
5643 7718 6.420903 GGTTCTTACAAAAGAGAAACATTGGC 59.579 38.462 0.00 0.00 42.60 4.52
5644 7719 6.636850 CGGTTCTTACAAAAGAGAAACATTGG 59.363 38.462 2.56 0.00 42.60 3.16
5645 7720 7.414436 TCGGTTCTTACAAAAGAGAAACATTG 58.586 34.615 2.56 0.00 42.60 2.82
5646 7721 7.282450 ACTCGGTTCTTACAAAAGAGAAACATT 59.718 33.333 2.56 0.00 42.60 2.71
5647 7722 6.766467 ACTCGGTTCTTACAAAAGAGAAACAT 59.234 34.615 2.56 0.00 42.60 2.71
5648 7723 6.110707 ACTCGGTTCTTACAAAAGAGAAACA 58.889 36.000 2.56 0.00 42.60 2.83
5649 7724 6.561717 CGACTCGGTTCTTACAAAAGAGAAAC 60.562 42.308 0.00 0.00 42.60 2.78
5650 7725 5.461078 CGACTCGGTTCTTACAAAAGAGAAA 59.539 40.000 0.00 0.00 42.60 2.52
5651 7726 4.980434 CGACTCGGTTCTTACAAAAGAGAA 59.020 41.667 0.00 0.00 42.60 2.87
5652 7727 4.276678 TCGACTCGGTTCTTACAAAAGAGA 59.723 41.667 0.00 0.00 42.60 3.10
5653 7728 4.543692 TCGACTCGGTTCTTACAAAAGAG 58.456 43.478 0.00 0.00 42.60 2.85
5654 7729 4.572985 TCGACTCGGTTCTTACAAAAGA 57.427 40.909 0.00 0.00 40.03 2.52
5655 7730 4.434330 GCATCGACTCGGTTCTTACAAAAG 60.434 45.833 0.00 0.00 0.00 2.27
5656 7731 3.430895 GCATCGACTCGGTTCTTACAAAA 59.569 43.478 0.00 0.00 0.00 2.44
5657 7732 2.991190 GCATCGACTCGGTTCTTACAAA 59.009 45.455 0.00 0.00 0.00 2.83
5658 7733 2.602878 GCATCGACTCGGTTCTTACAA 58.397 47.619 0.00 0.00 0.00 2.41
5659 7734 1.466866 CGCATCGACTCGGTTCTTACA 60.467 52.381 0.00 0.00 0.00 2.41
5660 7735 1.189403 CGCATCGACTCGGTTCTTAC 58.811 55.000 0.00 0.00 0.00 2.34
5661 7736 1.089112 TCGCATCGACTCGGTTCTTA 58.911 50.000 8.07 0.00 0.00 2.10
5662 7737 1.880894 TCGCATCGACTCGGTTCTT 59.119 52.632 8.07 0.00 0.00 2.52
5663 7738 3.587095 TCGCATCGACTCGGTTCT 58.413 55.556 8.07 0.00 0.00 3.01
5672 7747 2.274232 ATTTCGTCCCGTCGCATCGA 62.274 55.000 0.00 0.00 0.00 3.59
5673 7748 0.593008 TATTTCGTCCCGTCGCATCG 60.593 55.000 0.00 0.00 0.00 3.84
5674 7749 1.563111 TTATTTCGTCCCGTCGCATC 58.437 50.000 0.00 0.00 0.00 3.91
5675 7750 1.662122 GTTTATTTCGTCCCGTCGCAT 59.338 47.619 0.00 0.00 0.00 4.73
5676 7751 1.070038 GTTTATTTCGTCCCGTCGCA 58.930 50.000 0.00 0.00 0.00 5.10
5677 7752 1.353076 AGTTTATTTCGTCCCGTCGC 58.647 50.000 0.00 0.00 0.00 5.19
5678 7753 4.622740 AGTAAAGTTTATTTCGTCCCGTCG 59.377 41.667 0.00 0.00 0.00 5.12
5679 7754 6.471976 AAGTAAAGTTTATTTCGTCCCGTC 57.528 37.500 0.00 0.00 0.00 4.79
5680 7755 6.866010 AAAGTAAAGTTTATTTCGTCCCGT 57.134 33.333 4.09 0.00 0.00 5.28
5702 7777 8.580720 TGCTATTACCTCTTTTACATGCAAAAA 58.419 29.630 5.39 5.97 0.00 1.94
5703 7778 8.026607 GTGCTATTACCTCTTTTACATGCAAAA 58.973 33.333 3.85 3.85 0.00 2.44
5704 7779 7.362574 GGTGCTATTACCTCTTTTACATGCAAA 60.363 37.037 0.00 0.00 37.74 3.68
5705 7780 6.094881 GGTGCTATTACCTCTTTTACATGCAA 59.905 38.462 0.00 0.00 37.74 4.08
5706 7781 5.588648 GGTGCTATTACCTCTTTTACATGCA 59.411 40.000 0.00 0.00 37.74 3.96
5707 7782 5.277345 CGGTGCTATTACCTCTTTTACATGC 60.277 44.000 0.00 0.00 38.62 4.06
5708 7783 5.236478 CCGGTGCTATTACCTCTTTTACATG 59.764 44.000 0.00 0.00 38.62 3.21
5709 7784 5.365619 CCGGTGCTATTACCTCTTTTACAT 58.634 41.667 0.00 0.00 38.62 2.29
5710 7785 4.761975 CCGGTGCTATTACCTCTTTTACA 58.238 43.478 0.00 0.00 38.62 2.41
5711 7786 3.558829 GCCGGTGCTATTACCTCTTTTAC 59.441 47.826 1.90 0.00 38.62 2.01
5712 7787 3.198200 TGCCGGTGCTATTACCTCTTTTA 59.802 43.478 1.90 0.00 38.62 1.52
5713 7788 2.026636 TGCCGGTGCTATTACCTCTTTT 60.027 45.455 1.90 0.00 38.62 2.27
5714 7789 1.557832 TGCCGGTGCTATTACCTCTTT 59.442 47.619 1.90 0.00 38.62 2.52
5715 7790 1.139058 CTGCCGGTGCTATTACCTCTT 59.861 52.381 1.90 0.00 38.62 2.85
5716 7791 0.753262 CTGCCGGTGCTATTACCTCT 59.247 55.000 1.90 0.00 38.62 3.69
5717 7792 0.464452 ACTGCCGGTGCTATTACCTC 59.536 55.000 1.90 0.00 38.62 3.85
5718 7793 0.464452 GACTGCCGGTGCTATTACCT 59.536 55.000 1.90 0.00 38.62 3.08
5719 7794 0.532196 GGACTGCCGGTGCTATTACC 60.532 60.000 1.90 0.00 38.71 2.85
5720 7795 0.464452 AGGACTGCCGGTGCTATTAC 59.536 55.000 1.90 0.00 44.77 1.89
5721 7796 0.464036 CAGGACTGCCGGTGCTATTA 59.536 55.000 1.90 0.00 44.82 0.98
5722 7797 1.221840 CAGGACTGCCGGTGCTATT 59.778 57.895 1.90 0.00 44.82 1.73
5723 7798 1.264749 TTCAGGACTGCCGGTGCTAT 61.265 55.000 1.90 0.00 44.82 2.97
5724 7799 1.476845 TTTCAGGACTGCCGGTGCTA 61.477 55.000 1.90 0.00 44.82 3.49
5726 7801 2.281484 TTTCAGGACTGCCGGTGC 60.281 61.111 1.90 0.00 39.96 5.01
5727 7802 0.535102 AAGTTTCAGGACTGCCGGTG 60.535 55.000 1.90 0.00 39.96 4.94
5728 7803 0.535102 CAAGTTTCAGGACTGCCGGT 60.535 55.000 1.90 0.00 39.96 5.28
5729 7804 0.535102 ACAAGTTTCAGGACTGCCGG 60.535 55.000 0.00 0.00 39.96 6.13
5730 7805 1.264288 GAACAAGTTTCAGGACTGCCG 59.736 52.381 0.00 0.00 39.96 5.69
5731 7806 2.291741 CTGAACAAGTTTCAGGACTGCC 59.708 50.000 6.17 0.00 41.54 4.85
5732 7807 3.615849 CTGAACAAGTTTCAGGACTGC 57.384 47.619 6.17 0.00 41.54 4.40
5738 7813 5.471116 TCATCACATCCTGAACAAGTTTCAG 59.529 40.000 6.98 6.98 44.05 3.02
5739 7814 5.375773 TCATCACATCCTGAACAAGTTTCA 58.624 37.500 0.00 0.00 30.60 2.69
5740 7815 5.947228 TCATCACATCCTGAACAAGTTTC 57.053 39.130 0.00 0.00 30.60 2.78
5741 7816 6.243900 AGATCATCACATCCTGAACAAGTTT 58.756 36.000 0.00 0.00 30.60 2.66
5742 7817 5.813383 AGATCATCACATCCTGAACAAGTT 58.187 37.500 0.00 0.00 30.60 2.66
5743 7818 5.432680 AGATCATCACATCCTGAACAAGT 57.567 39.130 0.00 0.00 30.60 3.16
5744 7819 6.580788 ACTAGATCATCACATCCTGAACAAG 58.419 40.000 0.00 0.00 30.60 3.16
5745 7820 6.550938 ACTAGATCATCACATCCTGAACAA 57.449 37.500 0.00 0.00 30.60 2.83
5746 7821 6.155049 TGAACTAGATCATCACATCCTGAACA 59.845 38.462 0.00 0.00 30.60 3.18
5747 7822 6.577103 TGAACTAGATCATCACATCCTGAAC 58.423 40.000 0.00 0.00 30.60 3.18
5748 7823 6.796785 TGAACTAGATCATCACATCCTGAA 57.203 37.500 0.00 0.00 30.60 3.02
5749 7824 6.796785 TTGAACTAGATCATCACATCCTGA 57.203 37.500 3.25 0.00 0.00 3.86
5750 7825 7.551974 AGTTTTGAACTAGATCATCACATCCTG 59.448 37.037 3.25 0.00 40.69 3.86
5751 7826 7.628234 AGTTTTGAACTAGATCATCACATCCT 58.372 34.615 3.25 0.00 40.69 3.24
5752 7827 7.856145 AGTTTTGAACTAGATCATCACATCC 57.144 36.000 3.25 0.00 40.69 3.51
5753 7828 7.695618 GCAAGTTTTGAACTAGATCATCACATC 59.304 37.037 3.25 0.00 41.91 3.06
5754 7829 7.175467 TGCAAGTTTTGAACTAGATCATCACAT 59.825 33.333 3.25 0.00 41.91 3.21
5755 7830 6.486320 TGCAAGTTTTGAACTAGATCATCACA 59.514 34.615 3.25 0.00 41.91 3.58
5756 7831 6.902341 TGCAAGTTTTGAACTAGATCATCAC 58.098 36.000 3.25 4.11 41.91 3.06
5757 7832 7.509141 TTGCAAGTTTTGAACTAGATCATCA 57.491 32.000 3.25 0.00 41.91 3.07
5758 7833 8.801715 TTTTGCAAGTTTTGAACTAGATCATC 57.198 30.769 3.25 0.00 41.91 2.92
5759 7834 7.383300 GCTTTTGCAAGTTTTGAACTAGATCAT 59.617 33.333 3.25 0.00 46.58 2.45
5760 7835 6.697019 GCTTTTGCAAGTTTTGAACTAGATCA 59.303 34.615 0.00 0.00 46.58 2.92
5761 7836 7.098503 GCTTTTGCAAGTTTTGAACTAGATC 57.901 36.000 0.00 0.00 46.58 2.75
5785 7860 4.789012 AGTTGTGGGATGCAATAGTTTG 57.211 40.909 0.00 0.00 35.85 2.93
5786 7861 7.068226 GGTATAAGTTGTGGGATGCAATAGTTT 59.932 37.037 0.00 0.00 0.00 2.66
5787 7862 6.546034 GGTATAAGTTGTGGGATGCAATAGTT 59.454 38.462 0.00 0.00 0.00 2.24
5788 7863 6.062095 GGTATAAGTTGTGGGATGCAATAGT 58.938 40.000 0.00 0.00 0.00 2.12
5789 7864 5.473504 GGGTATAAGTTGTGGGATGCAATAG 59.526 44.000 0.00 0.00 0.00 1.73
5790 7865 5.103898 TGGGTATAAGTTGTGGGATGCAATA 60.104 40.000 0.00 0.00 0.00 1.90
5791 7866 4.215109 GGGTATAAGTTGTGGGATGCAAT 58.785 43.478 0.00 0.00 0.00 3.56
5792 7867 3.010696 TGGGTATAAGTTGTGGGATGCAA 59.989 43.478 0.00 0.00 0.00 4.08
5793 7868 2.578480 TGGGTATAAGTTGTGGGATGCA 59.422 45.455 0.00 0.00 0.00 3.96
5794 7869 3.290948 TGGGTATAAGTTGTGGGATGC 57.709 47.619 0.00 0.00 0.00 3.91
5795 7870 5.067674 CACATTGGGTATAAGTTGTGGGATG 59.932 44.000 0.00 0.00 32.78 3.51
5796 7871 5.200483 CACATTGGGTATAAGTTGTGGGAT 58.800 41.667 0.00 0.00 32.78 3.85
5797 7872 4.043561 ACACATTGGGTATAAGTTGTGGGA 59.956 41.667 0.00 0.00 38.94 4.37
5798 7873 4.340617 ACACATTGGGTATAAGTTGTGGG 58.659 43.478 0.00 0.00 38.94 4.61
5799 7874 7.455641 TTTACACATTGGGTATAAGTTGTGG 57.544 36.000 0.00 0.00 38.94 4.17
5800 7875 9.921637 AAATTTACACATTGGGTATAAGTTGTG 57.078 29.630 0.00 0.00 40.12 3.33
5801 7876 9.921637 CAAATTTACACATTGGGTATAAGTTGT 57.078 29.630 16.85 2.78 0.00 3.32
5802 7877 9.364989 CCAAATTTACACATTGGGTATAAGTTG 57.635 33.333 17.50 17.50 39.92 3.16
5803 7878 9.095700 ACCAAATTTACACATTGGGTATAAGTT 57.904 29.630 0.00 1.23 46.26 2.66
5804 7879 8.658840 ACCAAATTTACACATTGGGTATAAGT 57.341 30.769 0.00 0.00 46.26 2.24
5805 7880 8.194769 GGACCAAATTTACACATTGGGTATAAG 58.805 37.037 0.00 0.00 46.26 1.73
5806 7881 7.896496 AGGACCAAATTTACACATTGGGTATAA 59.104 33.333 0.00 0.00 46.26 0.98
5807 7882 7.415086 AGGACCAAATTTACACATTGGGTATA 58.585 34.615 0.00 0.00 46.26 1.47
5808 7883 6.260663 AGGACCAAATTTACACATTGGGTAT 58.739 36.000 0.00 0.00 46.26 2.73
5809 7884 5.646215 AGGACCAAATTTACACATTGGGTA 58.354 37.500 8.47 0.00 46.26 3.69
5810 7885 4.488770 AGGACCAAATTTACACATTGGGT 58.511 39.130 8.47 0.00 46.26 4.51
5811 7886 5.394115 GCTAGGACCAAATTTACACATTGGG 60.394 44.000 8.47 0.00 46.26 4.12
5812 7887 9.144691 TTGGCTAGGACCAAATTTACACATTGG 62.145 40.741 0.00 2.38 46.65 3.16
5813 7888 5.184864 TGGCTAGGACCAAATTTACACATTG 59.815 40.000 0.00 0.00 36.55 2.82
5814 7889 5.329399 TGGCTAGGACCAAATTTACACATT 58.671 37.500 0.00 0.00 36.55 2.71
5815 7890 4.929479 TGGCTAGGACCAAATTTACACAT 58.071 39.130 0.00 0.00 36.55 3.21
5816 7891 4.374689 TGGCTAGGACCAAATTTACACA 57.625 40.909 0.00 0.00 36.55 3.72
5826 7901 0.824109 CGTCTGATTGGCTAGGACCA 59.176 55.000 0.00 0.00 38.16 4.02
5827 7902 1.112113 TCGTCTGATTGGCTAGGACC 58.888 55.000 0.00 0.00 0.00 4.46
5828 7903 1.534175 CGTCGTCTGATTGGCTAGGAC 60.534 57.143 0.00 0.00 0.00 3.85
5829 7904 0.738975 CGTCGTCTGATTGGCTAGGA 59.261 55.000 0.00 0.00 0.00 2.94
5830 7905 0.738975 TCGTCGTCTGATTGGCTAGG 59.261 55.000 0.00 0.00 0.00 3.02
5831 7906 1.132453 TGTCGTCGTCTGATTGGCTAG 59.868 52.381 0.00 0.00 0.00 3.42
5832 7907 1.170442 TGTCGTCGTCTGATTGGCTA 58.830 50.000 0.00 0.00 0.00 3.93
5833 7908 0.317160 TTGTCGTCGTCTGATTGGCT 59.683 50.000 0.00 0.00 0.00 4.75
5834 7909 0.716108 CTTGTCGTCGTCTGATTGGC 59.284 55.000 0.00 0.00 0.00 4.52
5835 7910 1.721389 CACTTGTCGTCGTCTGATTGG 59.279 52.381 0.00 0.00 0.00 3.16
5836 7911 1.721389 CCACTTGTCGTCGTCTGATTG 59.279 52.381 0.00 0.00 0.00 2.67
5837 7912 1.611977 TCCACTTGTCGTCGTCTGATT 59.388 47.619 0.00 0.00 0.00 2.57
5838 7913 1.200252 CTCCACTTGTCGTCGTCTGAT 59.800 52.381 0.00 0.00 0.00 2.90
5839 7914 0.591659 CTCCACTTGTCGTCGTCTGA 59.408 55.000 0.00 0.00 0.00 3.27
5840 7915 1.004277 GCTCCACTTGTCGTCGTCTG 61.004 60.000 0.00 0.00 0.00 3.51
5841 7916 1.286260 GCTCCACTTGTCGTCGTCT 59.714 57.895 0.00 0.00 0.00 4.18
5842 7917 1.733399 GGCTCCACTTGTCGTCGTC 60.733 63.158 0.00 0.00 0.00 4.20
5843 7918 0.892358 TAGGCTCCACTTGTCGTCGT 60.892 55.000 0.00 0.00 0.00 4.34
5844 7919 0.179161 CTAGGCTCCACTTGTCGTCG 60.179 60.000 0.00 0.00 0.00 5.12
5845 7920 0.889306 ACTAGGCTCCACTTGTCGTC 59.111 55.000 0.00 0.00 0.00 4.20
5846 7921 0.889306 GACTAGGCTCCACTTGTCGT 59.111 55.000 0.00 0.00 34.53 4.34
5847 7922 0.888619 TGACTAGGCTCCACTTGTCG 59.111 55.000 0.00 0.00 43.21 4.35
5848 7923 1.404851 GCTGACTAGGCTCCACTTGTC 60.405 57.143 0.00 0.00 41.52 3.18
5849 7924 0.610687 GCTGACTAGGCTCCACTTGT 59.389 55.000 0.00 0.00 0.00 3.16
5850 7925 0.610174 TGCTGACTAGGCTCCACTTG 59.390 55.000 0.00 0.00 0.00 3.16
5851 7926 0.901124 CTGCTGACTAGGCTCCACTT 59.099 55.000 0.00 0.00 0.00 3.16
5852 7927 0.040351 TCTGCTGACTAGGCTCCACT 59.960 55.000 0.00 0.00 0.00 4.00
5853 7928 0.459489 CTCTGCTGACTAGGCTCCAC 59.541 60.000 0.00 0.00 0.00 4.02
5854 7929 1.326213 GCTCTGCTGACTAGGCTCCA 61.326 60.000 0.00 0.00 0.00 3.86
5855 7930 1.441311 GCTCTGCTGACTAGGCTCC 59.559 63.158 0.00 0.00 0.00 4.70
5856 7931 1.441311 GGCTCTGCTGACTAGGCTC 59.559 63.158 0.00 0.00 33.32 4.70
5857 7932 2.422231 CGGCTCTGCTGACTAGGCT 61.422 63.158 0.00 0.00 37.02 4.58
5858 7933 2.105930 CGGCTCTGCTGACTAGGC 59.894 66.667 0.00 0.00 37.02 3.93
5859 7934 2.010582 GACCGGCTCTGCTGACTAGG 62.011 65.000 0.00 0.00 37.02 3.02
5860 7935 1.315981 TGACCGGCTCTGCTGACTAG 61.316 60.000 0.00 0.00 37.02 2.57
5861 7936 1.304134 TGACCGGCTCTGCTGACTA 60.304 57.895 0.00 0.00 37.02 2.59
5862 7937 2.601666 TGACCGGCTCTGCTGACT 60.602 61.111 0.00 0.00 37.02 3.41
5863 7938 2.125753 CTGACCGGCTCTGCTGAC 60.126 66.667 0.00 0.00 37.02 3.51
5864 7939 4.074526 GCTGACCGGCTCTGCTGA 62.075 66.667 20.55 0.00 40.01 4.26
5874 7949 2.462255 AAAATGTGCTGCGCTGACCG 62.462 55.000 19.32 0.00 40.75 4.79
5875 7950 1.005294 CAAAATGTGCTGCGCTGACC 61.005 55.000 19.32 7.53 0.00 4.02
5876 7951 2.427360 CAAAATGTGCTGCGCTGAC 58.573 52.632 19.32 13.12 0.00 3.51
5877 7952 4.948576 CAAAATGTGCTGCGCTGA 57.051 50.000 19.32 0.00 0.00 4.26
5902 7977 2.444895 CCGAGGAGGAGAAGGGGG 60.445 72.222 0.00 0.00 45.00 5.40
5903 7978 2.444895 CCCGAGGAGGAGAAGGGG 60.445 72.222 0.00 0.00 45.00 4.79
5904 7979 2.444895 CCCCGAGGAGGAGAAGGG 60.445 72.222 0.00 0.00 45.00 3.95
5905 7980 2.690452 TCCCCGAGGAGGAGAAGG 59.310 66.667 0.00 0.00 45.00 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.