Multiple sequence alignment - TraesCS6D01G130200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G130200 chr6D 100.000 7817 0 0 1 7817 96708514 96700698 0.000000e+00 14436.0
1 TraesCS6D01G130200 chr6D 89.730 185 18 1 1 185 11443898 11444081 1.310000e-57 235.0
2 TraesCS6D01G130200 chr6B 95.883 3036 79 15 4055 7080 179703531 179700532 0.000000e+00 4872.0
3 TraesCS6D01G130200 chr6B 97.471 1305 24 3 1633 2928 179704832 179703528 0.000000e+00 2218.0
4 TraesCS6D01G130200 chr6B 93.820 987 59 2 3073 4059 679412382 679411398 0.000000e+00 1483.0
5 TraesCS6D01G130200 chr6B 93.340 991 61 3 3073 4059 679426992 679426003 0.000000e+00 1459.0
6 TraesCS6D01G130200 chr6B 92.320 612 36 10 800 1405 179706176 179705570 0.000000e+00 859.0
7 TraesCS6D01G130200 chr6B 86.194 775 69 13 1 738 179707286 179706513 0.000000e+00 804.0
8 TraesCS6D01G130200 chr6B 93.080 289 15 5 7074 7361 179700415 179700131 1.210000e-112 418.0
9 TraesCS6D01G130200 chr6B 77.385 650 114 26 209 839 134492009 134492644 9.650000e-94 355.0
10 TraesCS6D01G130200 chr6B 77.622 572 95 23 231 774 124471102 124471668 4.550000e-82 316.0
11 TraesCS6D01G130200 chr6B 95.946 148 6 0 2925 3072 679427185 679427038 2.820000e-59 241.0
12 TraesCS6D01G130200 chr6B 95.270 148 7 0 2925 3072 679412575 679412428 1.310000e-57 235.0
13 TraesCS6D01G130200 chr6B 93.421 152 5 2 1406 1557 179705429 179705283 3.670000e-53 220.0
14 TraesCS6D01G130200 chr6A 95.841 2573 68 8 4345 6909 115410341 115407800 0.000000e+00 4122.0
15 TraesCS6D01G130200 chr6A 94.893 2095 72 14 855 2929 115413099 115411020 0.000000e+00 3243.0
16 TraesCS6D01G130200 chr6A 86.150 787 61 16 1 744 115458572 115457791 0.000000e+00 806.0
17 TraesCS6D01G130200 chr6A 76.464 905 142 33 1 839 2938757 2937858 7.250000e-115 425.0
18 TraesCS6D01G130200 chr6A 92.149 242 16 1 7124 7362 115407496 115407255 9.720000e-89 339.0
19 TraesCS6D01G130200 chr6A 81.839 435 47 15 2922 3356 330473986 330474388 3.490000e-88 337.0
20 TraesCS6D01G130200 chr6A 97.838 185 4 0 4053 4237 115411026 115410842 3.520000e-83 320.0
21 TraesCS6D01G130200 chr6A 96.471 85 2 1 7046 7129 115407754 115407670 1.060000e-28 139.0
22 TraesCS6D01G130200 chr6A 98.485 66 0 1 6917 6981 115407817 115407752 1.780000e-21 115.0
23 TraesCS6D01G130200 chr6A 95.522 67 3 0 4232 4298 115410419 115410353 2.980000e-19 108.0
24 TraesCS6D01G130200 chr4D 93.727 2136 82 18 5003 7121 150965305 150963205 0.000000e+00 3155.0
25 TraesCS6D01G130200 chr4D 95.349 946 31 5 1926 2863 150968372 150967432 0.000000e+00 1491.0
26 TraesCS6D01G130200 chr4D 94.842 950 39 5 4055 5002 150966509 150965568 0.000000e+00 1474.0
27 TraesCS6D01G130200 chr4D 92.698 986 67 3 3073 4058 457585107 457586087 0.000000e+00 1417.0
28 TraesCS6D01G130200 chr4D 90.128 547 40 10 867 1405 150969611 150969071 0.000000e+00 699.0
29 TraesCS6D01G130200 chr4D 89.606 558 47 7 855 1405 150977361 150976808 0.000000e+00 699.0
30 TraesCS6D01G130200 chr4D 87.822 427 40 7 1445 1869 150969079 150968663 2.530000e-134 490.0
31 TraesCS6D01G130200 chr4D 88.509 409 38 4 1445 1852 150976816 150976416 3.280000e-133 486.0
32 TraesCS6D01G130200 chr4D 85.496 262 22 9 7116 7376 150959590 150959344 7.780000e-65 259.0
33 TraesCS6D01G130200 chr4D 96.104 154 5 1 2920 3072 457584913 457585066 4.680000e-62 250.0
34 TraesCS6D01G130200 chr2D 96.177 994 30 3 3073 4065 403342960 403343946 0.000000e+00 1618.0
35 TraesCS6D01G130200 chr2D 91.469 633 43 7 3425 4055 427340579 427341202 0.000000e+00 859.0
36 TraesCS6D01G130200 chr2D 97.826 368 8 0 7448 7815 66553126 66553493 3.080000e-178 636.0
37 TraesCS6D01G130200 chr2D 97.548 367 9 0 7449 7815 90248019 90248385 5.150000e-176 628.0
38 TraesCS6D01G130200 chr2D 79.406 505 73 17 1 475 106969011 106968508 2.100000e-85 327.0
39 TraesCS6D01G130200 chr2D 77.851 456 82 14 209 648 643829923 643830375 1.670000e-66 265.0
40 TraesCS6D01G130200 chr2D 95.946 148 5 1 2926 3072 403342772 403342919 1.010000e-58 239.0
41 TraesCS6D01G130200 chr2D 95.205 146 7 0 2927 3072 427340282 427340427 1.700000e-56 231.0
42 TraesCS6D01G130200 chr4B 96.393 499 18 0 3072 3570 90343437 90343935 0.000000e+00 822.0
43 TraesCS6D01G130200 chr4B 95.391 499 20 2 3073 3570 607429673 607429177 0.000000e+00 791.0
44 TraesCS6D01G130200 chr4B 95.181 498 24 0 3073 3570 90165727 90166224 0.000000e+00 787.0
45 TraesCS6D01G130200 chr4B 95.225 377 17 1 3682 4058 607429175 607428800 5.220000e-166 595.0
46 TraesCS6D01G130200 chr4B 90.968 310 8 6 3124 3433 531068926 531069215 4.390000e-107 399.0
47 TraesCS6D01G130200 chr4B 89.113 248 26 1 3681 3928 90166225 90166471 2.740000e-79 307.0
48 TraesCS6D01G130200 chr4B 88.306 248 27 2 3681 3928 90343936 90344181 5.930000e-76 296.0
49 TraesCS6D01G130200 chr4B 96.599 147 5 0 2926 3072 607429865 607429719 2.180000e-60 244.0
50 TraesCS6D01G130200 chr4B 95.139 144 7 0 2929 3072 90165540 90165683 2.190000e-55 228.0
51 TraesCS6D01G130200 chr3A 86.950 636 57 9 3431 4057 471277121 471276503 0.000000e+00 691.0
52 TraesCS6D01G130200 chr3A 83.603 433 39 16 2924 3356 471277533 471277133 2.060000e-100 377.0
53 TraesCS6D01G130200 chr3A 83.333 336 34 12 3727 4060 336593465 336593150 2.760000e-74 291.0
54 TraesCS6D01G130200 chr5D 98.087 366 6 1 7450 7815 411999005 411999369 3.080000e-178 636.0
55 TraesCS6D01G130200 chr5D 97.541 366 9 0 7450 7815 412043021 412043386 1.850000e-175 627.0
56 TraesCS6D01G130200 chr5D 77.298 903 127 33 1 844 527145783 527144900 1.990000e-125 460.0
57 TraesCS6D01G130200 chr5D 76.804 901 137 36 1 839 9391311 9390421 2.590000e-119 440.0
58 TraesCS6D01G130200 chr2A 97.003 367 10 1 7450 7815 194708029 194707663 4.010000e-172 616.0
59 TraesCS6D01G130200 chr7D 96.712 365 12 0 7451 7815 29984319 29983955 6.710000e-170 608.0
60 TraesCS6D01G130200 chr7D 77.126 835 125 39 2 780 552310416 552309592 2.610000e-114 424.0
61 TraesCS6D01G130200 chr7D 79.282 362 43 15 1 332 117393828 117394187 2.840000e-54 224.0
62 TraesCS6D01G130200 chr3B 96.164 365 14 0 7451 7815 182753909 182753545 1.450000e-166 597.0
63 TraesCS6D01G130200 chr3B 79.336 813 127 22 1 780 144489329 144490133 4.150000e-147 532.0
64 TraesCS6D01G130200 chr3B 80.640 594 87 15 210 780 467050950 467051538 1.200000e-117 435.0
65 TraesCS6D01G130200 chr3B 77.796 599 93 22 209 774 647227246 647227837 4.520000e-87 333.0
66 TraesCS6D01G130200 chr1D 83.002 653 80 21 208 837 119296880 119296236 5.300000e-156 562.0
67 TraesCS6D01G130200 chr1D 93.151 365 22 3 7445 7809 86884866 86884505 4.150000e-147 532.0
68 TraesCS6D01G130200 chr1D 88.172 186 19 3 4 187 448221234 448221418 1.320000e-52 219.0
69 TraesCS6D01G130200 chr1D 84.783 184 25 3 656 839 199071482 199071302 1.730000e-41 182.0
70 TraesCS6D01G130200 chr3D 93.681 364 22 1 7450 7813 40991740 40991378 1.920000e-150 544.0
71 TraesCS6D01G130200 chr3D 85.030 334 30 11 3727 4060 253507699 253507386 9.790000e-84 322.0
72 TraesCS6D01G130200 chr3D 88.618 246 18 3 3072 3308 253508047 253507803 2.760000e-74 291.0
73 TraesCS6D01G130200 chr7A 79.336 663 100 14 208 850 628911030 628910385 1.560000e-116 431.0
74 TraesCS6D01G130200 chr7A 90.323 93 9 0 3546 3638 165837012 165836920 1.070000e-23 122.0
75 TraesCS6D01G130200 chrUn 76.190 903 146 30 1 840 337029732 337028836 5.640000e-111 412.0
76 TraesCS6D01G130200 chrUn 78.307 378 53 11 1 349 447562736 447562359 4.750000e-52 217.0
77 TraesCS6D01G130200 chr7B 78.647 665 110 18 208 846 590150663 590150005 5.640000e-111 412.0
78 TraesCS6D01G130200 chr2B 76.792 586 106 19 208 766 58833781 58834363 1.270000e-77 302.0
79 TraesCS6D01G130200 chr1A 85.326 184 21 6 656 839 131802874 131802697 1.340000e-42 185.0
80 TraesCS6D01G130200 chr1A 84.409 186 23 6 656 839 250200458 250200277 2.240000e-40 178.0
81 TraesCS6D01G130200 chr4A 90.588 85 7 1 3549 3632 40247672 40247756 2.310000e-20 111.0
82 TraesCS6D01G130200 chr5A 96.970 33 1 0 7144 7176 138442558 138442590 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G130200 chr6D 96700698 96708514 7816 True 14436.000000 14436 100.000000 1 7817 1 chr6D.!!$R1 7816
1 TraesCS6D01G130200 chr6B 179700131 179707286 7155 True 1565.166667 4872 93.061500 1 7361 6 chr6B.!!$R1 7360
2 TraesCS6D01G130200 chr6B 679411398 679412575 1177 True 859.000000 1483 94.545000 2925 4059 2 chr6B.!!$R2 1134
3 TraesCS6D01G130200 chr6B 679426003 679427185 1182 True 850.000000 1459 94.643000 2925 4059 2 chr6B.!!$R3 1134
4 TraesCS6D01G130200 chr6B 134492009 134492644 635 False 355.000000 355 77.385000 209 839 1 chr6B.!!$F2 630
5 TraesCS6D01G130200 chr6B 124471102 124471668 566 False 316.000000 316 77.622000 231 774 1 chr6B.!!$F1 543
6 TraesCS6D01G130200 chr6A 115407255 115413099 5844 True 1198.000000 4122 95.885571 855 7362 7 chr6A.!!$R3 6507
7 TraesCS6D01G130200 chr6A 115457791 115458572 781 True 806.000000 806 86.150000 1 744 1 chr6A.!!$R2 743
8 TraesCS6D01G130200 chr6A 2937858 2938757 899 True 425.000000 425 76.464000 1 839 1 chr6A.!!$R1 838
9 TraesCS6D01G130200 chr4D 150959344 150969611 10267 True 1261.333333 3155 91.227333 867 7376 6 chr4D.!!$R1 6509
10 TraesCS6D01G130200 chr4D 457584913 457586087 1174 False 833.500000 1417 94.401000 2920 4058 2 chr4D.!!$F1 1138
11 TraesCS6D01G130200 chr4D 150976416 150977361 945 True 592.500000 699 89.057500 855 1852 2 chr4D.!!$R2 997
12 TraesCS6D01G130200 chr2D 403342772 403343946 1174 False 928.500000 1618 96.061500 2926 4065 2 chr2D.!!$F4 1139
13 TraesCS6D01G130200 chr2D 427340282 427341202 920 False 545.000000 859 93.337000 2927 4055 2 chr2D.!!$F5 1128
14 TraesCS6D01G130200 chr2D 106968508 106969011 503 True 327.000000 327 79.406000 1 475 1 chr2D.!!$R1 474
15 TraesCS6D01G130200 chr4B 90343437 90344181 744 False 559.000000 822 92.349500 3072 3928 2 chr4B.!!$F3 856
16 TraesCS6D01G130200 chr4B 607428800 607429865 1065 True 543.333333 791 95.738333 2926 4058 3 chr4B.!!$R1 1132
17 TraesCS6D01G130200 chr4B 90165540 90166471 931 False 440.666667 787 93.144333 2929 3928 3 chr4B.!!$F2 999
18 TraesCS6D01G130200 chr3A 471276503 471277533 1030 True 534.000000 691 85.276500 2924 4057 2 chr3A.!!$R2 1133
19 TraesCS6D01G130200 chr5D 527144900 527145783 883 True 460.000000 460 77.298000 1 844 1 chr5D.!!$R2 843
20 TraesCS6D01G130200 chr5D 9390421 9391311 890 True 440.000000 440 76.804000 1 839 1 chr5D.!!$R1 838
21 TraesCS6D01G130200 chr7D 552309592 552310416 824 True 424.000000 424 77.126000 2 780 1 chr7D.!!$R2 778
22 TraesCS6D01G130200 chr3B 144489329 144490133 804 False 532.000000 532 79.336000 1 780 1 chr3B.!!$F1 779
23 TraesCS6D01G130200 chr3B 467050950 467051538 588 False 435.000000 435 80.640000 210 780 1 chr3B.!!$F2 570
24 TraesCS6D01G130200 chr3B 647227246 647227837 591 False 333.000000 333 77.796000 209 774 1 chr3B.!!$F3 565
25 TraesCS6D01G130200 chr1D 119296236 119296880 644 True 562.000000 562 83.002000 208 837 1 chr1D.!!$R2 629
26 TraesCS6D01G130200 chr3D 253507386 253508047 661 True 306.500000 322 86.824000 3072 4060 2 chr3D.!!$R2 988
27 TraesCS6D01G130200 chr7A 628910385 628911030 645 True 431.000000 431 79.336000 208 850 1 chr7A.!!$R2 642
28 TraesCS6D01G130200 chrUn 337028836 337029732 896 True 412.000000 412 76.190000 1 840 1 chrUn.!!$R1 839
29 TraesCS6D01G130200 chr7B 590150005 590150663 658 True 412.000000 412 78.647000 208 846 1 chr7B.!!$R1 638
30 TraesCS6D01G130200 chr2B 58833781 58834363 582 False 302.000000 302 76.792000 208 766 1 chr2B.!!$F1 558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
934 1387 0.670546 AAAGTCTGACCATGACGCCG 60.671 55.000 3.76 0.0 39.24 6.46 F
1344 1804 0.250234 TGACTCATTTCAGGAGCCCG 59.750 55.000 0.00 0.0 35.79 6.13 F
1584 2590 2.123948 TGACGTGTCAAGTGCGTACAC 61.124 52.381 6.38 0.0 39.87 2.90 F
2948 5060 0.666374 GGTGTGTTTGGTTCGGGAAG 59.334 55.000 0.00 0.0 0.00 3.46 F
4420 7272 0.179000 GGGAAGTCAGGCACGATGAT 59.821 55.000 0.00 0.0 0.00 2.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1746 2753 1.371183 CACAGAGGGTCTTCGGCAA 59.629 57.895 0.00 0.00 0.00 4.52 R
2948 5060 0.608035 TGCCATTCCGTTCCACTTCC 60.608 55.000 0.00 0.00 0.00 3.46 R
4406 7258 3.982475 TGAGAATATCATCGTGCCTGAC 58.018 45.455 0.00 0.00 31.12 3.51 R
5504 8627 1.616374 TCACTTGACGTGCTGGACATA 59.384 47.619 0.00 0.00 43.46 2.29 R
7221 14277 0.108520 GTCATCCGCGGACTAAACCA 60.109 55.000 33.75 5.46 32.54 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 191 1.181786 GGCATCCAATTTTGACCGGA 58.818 50.000 9.46 0.00 0.00 5.14
204 216 1.753649 CCGGATCTTCTCAAGCTCTCA 59.246 52.381 0.00 0.00 0.00 3.27
265 323 8.601546 AGGTATTCAATTTTGGATTTGGCTTAA 58.398 29.630 0.00 0.00 0.00 1.85
421 504 4.018506 TCACTGATGCAGAAATTTCCCCTA 60.019 41.667 14.61 0.00 35.18 3.53
466 550 9.077885 GTGGGTAACATATAATCAACCATGAAT 57.922 33.333 0.00 0.00 37.47 2.57
518 608 1.556451 CACACACTCCATCATCTCCCA 59.444 52.381 0.00 0.00 0.00 4.37
616 715 5.382618 AATTTGACCAAGCTTAGAGCAAG 57.617 39.130 0.00 0.00 45.56 4.01
844 1288 6.319405 GTGTGTCCAACCCTTTTAGTTAAGAA 59.681 38.462 0.00 0.00 0.00 2.52
845 1289 7.013942 GTGTGTCCAACCCTTTTAGTTAAGAAT 59.986 37.037 0.00 0.00 0.00 2.40
847 1291 9.070179 GTGTCCAACCCTTTTAGTTAAGAATAA 57.930 33.333 0.00 0.00 0.00 1.40
848 1292 9.070179 TGTCCAACCCTTTTAGTTAAGAATAAC 57.930 33.333 0.00 0.00 41.45 1.89
850 1294 9.511272 TCCAACCCTTTTAGTTAAGAATAACTC 57.489 33.333 4.62 0.00 46.97 3.01
851 1295 8.737175 CCAACCCTTTTAGTTAAGAATAACTCC 58.263 37.037 4.62 0.00 46.97 3.85
853 1297 9.516546 AACCCTTTTAGTTAAGAATAACTCCAG 57.483 33.333 4.62 1.25 46.97 3.86
884 1330 0.958876 TTGCGACGCAGAGAGTAGGA 60.959 55.000 23.18 1.32 40.61 2.94
934 1387 0.670546 AAAGTCTGACCATGACGCCG 60.671 55.000 3.76 0.00 39.24 6.46
935 1388 1.816863 AAGTCTGACCATGACGCCGT 61.817 55.000 3.76 0.00 39.24 5.68
940 1393 4.617520 ACCATGACGCCGTGCACA 62.618 61.111 18.64 0.00 0.00 4.57
951 1409 1.568612 CCGTGCACAGACGCAAATCT 61.569 55.000 18.64 0.00 45.14 2.40
1102 1560 4.681978 AGTTGTGCGCGTCCCCTC 62.682 66.667 8.43 0.00 0.00 4.30
1310 1770 3.516949 TTCCTTCCCCGCCCCAAAC 62.517 63.158 0.00 0.00 0.00 2.93
1341 1801 5.695851 TTCTTTTGACTCATTTCAGGAGC 57.304 39.130 0.00 0.00 35.79 4.70
1344 1804 0.250234 TGACTCATTTCAGGAGCCCG 59.750 55.000 0.00 0.00 35.79 6.13
1459 2063 7.517417 GCACATCTCCGTAGAATGAACAAATAG 60.517 40.741 0.00 0.00 34.73 1.73
1466 2070 6.537301 CCGTAGAATGAACAAATAGGCAAGTA 59.463 38.462 0.00 0.00 0.00 2.24
1467 2071 7.226720 CCGTAGAATGAACAAATAGGCAAGTAT 59.773 37.037 0.00 0.00 0.00 2.12
1468 2072 8.612619 CGTAGAATGAACAAATAGGCAAGTATT 58.387 33.333 0.00 0.00 0.00 1.89
1488 2092 3.107402 TGCTCCTAGAATGTCTGTCCT 57.893 47.619 0.00 0.00 0.00 3.85
1513 2120 2.832201 GCTGCCCCTGCTCCATTC 60.832 66.667 0.00 0.00 38.71 2.67
1539 2146 2.908688 AGTTTGGATTGTTTGGCCAC 57.091 45.000 3.88 0.00 0.00 5.01
1584 2590 2.123948 TGACGTGTCAAGTGCGTACAC 61.124 52.381 6.38 0.00 39.87 2.90
1625 2631 2.459555 ATTAGGCAGGGAAATGTGGG 57.540 50.000 0.00 0.00 0.00 4.61
1705 2712 9.319143 CCTTTGTATGAGAAAGTGGAGTATAAG 57.681 37.037 0.00 0.00 0.00 1.73
1746 2753 8.415950 TGAATTAATTGGACATTAGGTGTTGT 57.584 30.769 5.17 0.00 42.36 3.32
1917 2925 5.798132 AGACATGCTCTTATTCTGTTCACA 58.202 37.500 0.00 0.00 0.00 3.58
2043 3291 6.434028 TCTTTGTGGAATTAGCAGCTAACATT 59.566 34.615 17.39 8.79 0.00 2.71
2297 3547 8.718734 GTGTGGATCTAGAACTTCGTTTTAAAT 58.281 33.333 0.00 0.00 0.00 1.40
2948 5060 0.666374 GGTGTGTTTGGTTCGGGAAG 59.334 55.000 0.00 0.00 0.00 3.46
3632 6051 3.553096 GGCTGAAGAAAACGAGTGAGAGA 60.553 47.826 0.00 0.00 0.00 3.10
3640 6059 2.101380 GAGTGAGAGAGCCGCGAC 59.899 66.667 8.23 0.00 0.00 5.19
4420 7272 0.179000 GGGAAGTCAGGCACGATGAT 59.821 55.000 0.00 0.00 0.00 2.45
4462 7314 9.064706 CAGTATTCATCTTATCTTGAAATGGCT 57.935 33.333 0.00 0.00 35.63 4.75
4725 7577 5.058490 ACATTTGGAAAGGCAAACATGAAG 58.942 37.500 0.00 0.00 0.00 3.02
5321 8436 0.460284 CTGGGTATGCACCGACTGAC 60.460 60.000 0.00 0.00 46.86 3.51
5344 8459 6.203072 ACTACCCTTCAGAAGTGGTATGTAT 58.797 40.000 21.65 11.30 35.32 2.29
5570 8693 1.761784 TGCAAGTTTTCACCTTGGCAT 59.238 42.857 0.00 0.00 39.72 4.40
5746 8869 1.549243 TTGTCCGCTACAGATGGGCA 61.549 55.000 0.00 0.00 39.87 5.36
6052 9175 3.076032 AGGTGGAGGTAATTTCTTTGGCT 59.924 43.478 0.00 0.00 0.00 4.75
6101 9224 3.326297 TCCCCACAAATTGTTTTGATCCC 59.674 43.478 0.00 0.00 44.11 3.85
6338 9461 8.113462 AGTTAATCCTTTGGTGGCTCTAAATTA 58.887 33.333 0.00 0.00 0.00 1.40
6401 9524 9.708222 CTTCCTGAGTAAATCATACAATTTTCG 57.292 33.333 0.00 0.00 37.28 3.46
6665 9790 3.081061 TGTCAAATCCAATCCGTCTTGG 58.919 45.455 6.85 6.85 45.91 3.61
6733 9858 6.985188 TTTACTGGAACATTCTAGCATGAC 57.015 37.500 9.48 3.13 39.14 3.06
6803 9928 1.911357 TCATCTGTCCTCCATGTTGCT 59.089 47.619 0.00 0.00 0.00 3.91
6890 10015 3.522553 CGGATGAGGAACTGAACTTACC 58.477 50.000 0.00 0.00 41.55 2.85
6891 10016 3.522553 GGATGAGGAACTGAACTTACCG 58.477 50.000 0.00 0.00 41.55 4.02
6892 10017 3.194968 GGATGAGGAACTGAACTTACCGA 59.805 47.826 0.00 0.00 41.55 4.69
6893 10018 3.655276 TGAGGAACTGAACTTACCGAC 57.345 47.619 0.00 0.00 41.55 4.79
6894 10019 2.960384 TGAGGAACTGAACTTACCGACA 59.040 45.455 0.00 0.00 41.55 4.35
6895 10020 3.005472 TGAGGAACTGAACTTACCGACAG 59.995 47.826 0.00 0.00 41.55 3.51
6896 10021 2.963782 AGGAACTGAACTTACCGACAGT 59.036 45.455 0.00 0.00 43.92 3.55
6899 10024 3.107642 ACTGAACTTACCGACAGTTGG 57.892 47.619 5.11 5.11 40.03 3.77
6900 10025 2.696707 ACTGAACTTACCGACAGTTGGA 59.303 45.455 14.52 0.00 40.03 3.53
6901 10026 3.323979 ACTGAACTTACCGACAGTTGGAT 59.676 43.478 14.52 0.68 40.03 3.41
6902 10027 3.659786 TGAACTTACCGACAGTTGGATG 58.340 45.455 14.52 5.52 34.49 3.51
6903 10028 3.322541 TGAACTTACCGACAGTTGGATGA 59.677 43.478 14.52 0.00 34.49 2.92
6904 10029 4.202274 TGAACTTACCGACAGTTGGATGAA 60.202 41.667 14.52 3.95 34.49 2.57
6905 10030 4.553330 ACTTACCGACAGTTGGATGAAT 57.447 40.909 14.52 0.00 0.00 2.57
6906 10031 4.253685 ACTTACCGACAGTTGGATGAATG 58.746 43.478 14.52 1.71 0.00 2.67
6907 10032 2.859165 ACCGACAGTTGGATGAATGT 57.141 45.000 14.52 0.00 0.00 2.71
6908 10033 3.140325 ACCGACAGTTGGATGAATGTT 57.860 42.857 14.52 0.00 0.00 2.71
6909 10034 4.280436 ACCGACAGTTGGATGAATGTTA 57.720 40.909 14.52 0.00 0.00 2.41
6910 10035 4.000988 ACCGACAGTTGGATGAATGTTAC 58.999 43.478 14.52 0.00 0.00 2.50
6911 10036 4.253685 CCGACAGTTGGATGAATGTTACT 58.746 43.478 0.00 0.00 0.00 2.24
6912 10037 4.695455 CCGACAGTTGGATGAATGTTACTT 59.305 41.667 0.00 0.00 0.00 2.24
6913 10038 5.872617 CCGACAGTTGGATGAATGTTACTTA 59.127 40.000 0.00 0.00 0.00 2.24
6914 10039 6.183360 CCGACAGTTGGATGAATGTTACTTAC 60.183 42.308 0.00 0.00 0.00 2.34
6915 10040 6.183360 CGACAGTTGGATGAATGTTACTTACC 60.183 42.308 0.00 0.00 0.00 2.85
7100 10352 2.576191 CCAAGTGGGAATTAGGTCTGGA 59.424 50.000 0.00 0.00 40.01 3.86
7142 14195 8.407457 TGTTCACTGAACGATAAATGTATCTC 57.593 34.615 15.60 0.00 44.55 2.75
7171 14227 1.272490 TCGGAAACTCGCAACAGATCT 59.728 47.619 0.00 0.00 0.00 2.75
7305 14361 0.460987 CGCTGTCCATCTCTGGGTTC 60.461 60.000 0.00 0.00 43.34 3.62
7339 14395 0.038709 CCATCTCTCGATCCGCTTCC 60.039 60.000 0.00 0.00 0.00 3.46
7417 14473 2.629051 GTAGGTAACCACATGGCAGAC 58.371 52.381 0.00 0.00 39.32 3.51
7418 14474 1.362224 AGGTAACCACATGGCAGACT 58.638 50.000 0.00 0.00 39.32 3.24
7419 14475 1.003580 AGGTAACCACATGGCAGACTG 59.996 52.381 0.00 0.00 39.32 3.51
7420 14476 1.003118 GGTAACCACATGGCAGACTGA 59.997 52.381 6.65 0.00 39.32 3.41
7421 14477 2.350522 GTAACCACATGGCAGACTGAG 58.649 52.381 6.65 0.00 39.32 3.35
7422 14478 0.607489 AACCACATGGCAGACTGAGC 60.607 55.000 6.65 0.00 39.32 4.26
7423 14479 1.298993 CCACATGGCAGACTGAGCT 59.701 57.895 6.65 0.00 0.00 4.09
7424 14480 0.322277 CCACATGGCAGACTGAGCTT 60.322 55.000 6.65 0.00 0.00 3.74
7425 14481 0.803117 CACATGGCAGACTGAGCTTG 59.197 55.000 6.65 0.34 0.00 4.01
7426 14482 0.399454 ACATGGCAGACTGAGCTTGT 59.601 50.000 6.65 0.97 0.00 3.16
7427 14483 0.803117 CATGGCAGACTGAGCTTGTG 59.197 55.000 6.65 0.00 0.00 3.33
7428 14484 0.399454 ATGGCAGACTGAGCTTGTGT 59.601 50.000 6.65 0.00 0.00 3.72
7429 14485 0.181114 TGGCAGACTGAGCTTGTGTT 59.819 50.000 6.65 0.00 0.00 3.32
7430 14486 1.416030 TGGCAGACTGAGCTTGTGTTA 59.584 47.619 6.65 0.00 0.00 2.41
7431 14487 1.801178 GGCAGACTGAGCTTGTGTTAC 59.199 52.381 6.65 0.00 0.00 2.50
7432 14488 2.483876 GCAGACTGAGCTTGTGTTACA 58.516 47.619 6.65 0.00 0.00 2.41
7433 14489 2.872245 GCAGACTGAGCTTGTGTTACAA 59.128 45.455 6.65 0.00 36.54 2.41
7434 14490 3.312421 GCAGACTGAGCTTGTGTTACAAA 59.688 43.478 6.65 0.00 37.69 2.83
7435 14491 4.023707 GCAGACTGAGCTTGTGTTACAAAT 60.024 41.667 6.65 0.00 37.69 2.32
7436 14492 5.179368 GCAGACTGAGCTTGTGTTACAAATA 59.821 40.000 6.65 0.00 37.69 1.40
7437 14493 6.619446 GCAGACTGAGCTTGTGTTACAAATAG 60.619 42.308 6.65 0.00 37.69 1.73
7438 14494 5.934625 AGACTGAGCTTGTGTTACAAATAGG 59.065 40.000 0.00 0.00 37.69 2.57
7439 14495 5.003804 ACTGAGCTTGTGTTACAAATAGGG 58.996 41.667 0.00 0.00 37.69 3.53
7440 14496 4.980573 TGAGCTTGTGTTACAAATAGGGT 58.019 39.130 0.00 0.00 37.69 4.34
7441 14497 6.116711 TGAGCTTGTGTTACAAATAGGGTA 57.883 37.500 0.00 0.00 37.69 3.69
7442 14498 6.170506 TGAGCTTGTGTTACAAATAGGGTAG 58.829 40.000 0.00 0.00 37.69 3.18
7443 14499 5.497474 AGCTTGTGTTACAAATAGGGTAGG 58.503 41.667 0.00 0.00 37.69 3.18
7444 14500 5.013808 AGCTTGTGTTACAAATAGGGTAGGT 59.986 40.000 0.00 0.00 37.69 3.08
7445 14501 6.214005 AGCTTGTGTTACAAATAGGGTAGGTA 59.786 38.462 0.00 0.00 37.69 3.08
7446 14502 6.880529 GCTTGTGTTACAAATAGGGTAGGTAA 59.119 38.462 0.00 0.00 37.69 2.85
7447 14503 7.555195 GCTTGTGTTACAAATAGGGTAGGTAAT 59.445 37.037 0.00 0.00 37.69 1.89
7448 14504 8.795842 TTGTGTTACAAATAGGGTAGGTAATG 57.204 34.615 0.00 0.00 34.76 1.90
7449 14505 7.920227 TGTGTTACAAATAGGGTAGGTAATGT 58.080 34.615 0.00 0.00 0.00 2.71
7450 14506 8.384718 TGTGTTACAAATAGGGTAGGTAATGTT 58.615 33.333 0.00 0.00 0.00 2.71
7451 14507 9.234827 GTGTTACAAATAGGGTAGGTAATGTTT 57.765 33.333 0.00 0.00 0.00 2.83
7452 14508 9.810870 TGTTACAAATAGGGTAGGTAATGTTTT 57.189 29.630 0.00 0.00 0.00 2.43
7493 14549 8.421249 AACTTTTATTCCTCAAATGATGACCA 57.579 30.769 0.00 0.00 33.47 4.02
7494 14550 8.421249 ACTTTTATTCCTCAAATGATGACCAA 57.579 30.769 0.00 0.00 33.47 3.67
7495 14551 8.869109 ACTTTTATTCCTCAAATGATGACCAAA 58.131 29.630 0.00 0.00 33.47 3.28
7496 14552 9.880157 CTTTTATTCCTCAAATGATGACCAAAT 57.120 29.630 0.00 0.00 33.47 2.32
7497 14553 9.874205 TTTTATTCCTCAAATGATGACCAAATC 57.126 29.630 0.00 0.00 33.47 2.17
7498 14554 5.565592 TTCCTCAAATGATGACCAAATCG 57.434 39.130 0.00 0.00 33.47 3.34
7499 14555 4.588899 TCCTCAAATGATGACCAAATCGT 58.411 39.130 0.00 0.00 33.47 3.73
7500 14556 5.009631 TCCTCAAATGATGACCAAATCGTT 58.990 37.500 0.00 0.00 37.38 3.85
7501 14557 5.476599 TCCTCAAATGATGACCAAATCGTTT 59.523 36.000 0.00 0.00 43.39 3.60
7502 14558 6.657117 TCCTCAAATGATGACCAAATCGTTTA 59.343 34.615 4.53 0.00 41.62 2.01
7503 14559 6.747280 CCTCAAATGATGACCAAATCGTTTAC 59.253 38.462 4.53 0.00 41.62 2.01
7504 14560 7.208225 TCAAATGATGACCAAATCGTTTACA 57.792 32.000 4.53 0.00 41.62 2.41
7505 14561 7.652727 TCAAATGATGACCAAATCGTTTACAA 58.347 30.769 4.53 0.00 41.62 2.41
7506 14562 8.303156 TCAAATGATGACCAAATCGTTTACAAT 58.697 29.630 4.53 0.00 41.62 2.71
7507 14563 8.924691 CAAATGATGACCAAATCGTTTACAATT 58.075 29.630 4.53 0.00 41.62 2.32
7508 14564 9.487790 AAATGATGACCAAATCGTTTACAATTT 57.512 25.926 3.21 0.00 41.69 1.82
7509 14565 9.487790 AATGATGACCAAATCGTTTACAATTTT 57.512 25.926 0.00 0.00 32.97 1.82
7510 14566 8.879342 TGATGACCAAATCGTTTACAATTTTT 57.121 26.923 0.00 0.00 0.00 1.94
7511 14567 8.759641 TGATGACCAAATCGTTTACAATTTTTG 58.240 29.630 0.00 0.00 0.00 2.44
7512 14568 7.470289 TGACCAAATCGTTTACAATTTTTGG 57.530 32.000 10.91 10.91 45.38 3.28
7513 14569 7.265673 TGACCAAATCGTTTACAATTTTTGGA 58.734 30.769 16.95 0.00 43.59 3.53
7514 14570 7.764443 TGACCAAATCGTTTACAATTTTTGGAA 59.236 29.630 16.95 5.87 43.59 3.53
7515 14571 8.137210 ACCAAATCGTTTACAATTTTTGGAAG 57.863 30.769 16.95 0.00 43.59 3.46
7516 14572 7.982354 ACCAAATCGTTTACAATTTTTGGAAGA 59.018 29.630 16.95 0.00 43.59 2.87
7517 14573 8.821894 CCAAATCGTTTACAATTTTTGGAAGAA 58.178 29.630 7.86 0.00 43.59 2.52
7528 14584 8.150296 ACAATTTTTGGAAGAATAAAGTCAGGG 58.850 33.333 0.00 0.00 34.12 4.45
7529 14585 6.664428 TTTTTGGAAGAATAAAGTCAGGGG 57.336 37.500 0.00 0.00 0.00 4.79
7530 14586 4.316025 TTGGAAGAATAAAGTCAGGGGG 57.684 45.455 0.00 0.00 0.00 5.40
7531 14587 3.537337 TGGAAGAATAAAGTCAGGGGGA 58.463 45.455 0.00 0.00 0.00 4.81
7532 14588 3.920197 TGGAAGAATAAAGTCAGGGGGAA 59.080 43.478 0.00 0.00 0.00 3.97
7533 14589 4.355588 TGGAAGAATAAAGTCAGGGGGAAA 59.644 41.667 0.00 0.00 0.00 3.13
7534 14590 4.950475 GGAAGAATAAAGTCAGGGGGAAAG 59.050 45.833 0.00 0.00 0.00 2.62
7535 14591 4.592997 AGAATAAAGTCAGGGGGAAAGG 57.407 45.455 0.00 0.00 0.00 3.11
7536 14592 4.183916 AGAATAAAGTCAGGGGGAAAGGA 58.816 43.478 0.00 0.00 0.00 3.36
7537 14593 4.606255 AGAATAAAGTCAGGGGGAAAGGAA 59.394 41.667 0.00 0.00 0.00 3.36
7538 14594 5.256389 AGAATAAAGTCAGGGGGAAAGGAAT 59.744 40.000 0.00 0.00 0.00 3.01
7539 14595 3.458044 AAAGTCAGGGGGAAAGGAATC 57.542 47.619 0.00 0.00 0.00 2.52
7540 14596 1.299939 AGTCAGGGGGAAAGGAATCC 58.700 55.000 0.00 0.00 38.86 3.01
7550 14606 4.790765 GGAAAGGAATCCCAAACTTCTG 57.209 45.455 0.00 0.00 33.05 3.02
7551 14607 4.407365 GGAAAGGAATCCCAAACTTCTGA 58.593 43.478 0.00 0.00 33.05 3.27
7552 14608 4.832823 GGAAAGGAATCCCAAACTTCTGAA 59.167 41.667 0.00 0.00 33.05 3.02
7553 14609 5.304357 GGAAAGGAATCCCAAACTTCTGAAA 59.696 40.000 0.00 0.00 33.05 2.69
7554 14610 5.791336 AAGGAATCCCAAACTTCTGAAAC 57.209 39.130 0.00 0.00 33.88 2.78
7555 14611 5.066913 AGGAATCCCAAACTTCTGAAACT 57.933 39.130 0.00 0.00 33.88 2.66
7556 14612 5.073428 AGGAATCCCAAACTTCTGAAACTC 58.927 41.667 0.00 0.00 33.88 3.01
7557 14613 5.073428 GGAATCCCAAACTTCTGAAACTCT 58.927 41.667 0.00 0.00 0.00 3.24
7558 14614 6.044404 AGGAATCCCAAACTTCTGAAACTCTA 59.956 38.462 0.00 0.00 33.88 2.43
7559 14615 6.372937 GGAATCCCAAACTTCTGAAACTCTAG 59.627 42.308 0.00 0.00 0.00 2.43
7560 14616 5.888982 TCCCAAACTTCTGAAACTCTAGT 57.111 39.130 0.00 0.00 0.00 2.57
7561 14617 6.989155 TCCCAAACTTCTGAAACTCTAGTA 57.011 37.500 0.00 0.00 0.00 1.82
7562 14618 6.756221 TCCCAAACTTCTGAAACTCTAGTAC 58.244 40.000 0.00 0.00 0.00 2.73
7563 14619 6.553852 TCCCAAACTTCTGAAACTCTAGTACT 59.446 38.462 0.00 0.00 0.00 2.73
7564 14620 7.727186 TCCCAAACTTCTGAAACTCTAGTACTA 59.273 37.037 1.89 1.89 0.00 1.82
7565 14621 8.365647 CCCAAACTTCTGAAACTCTAGTACTAA 58.634 37.037 3.76 0.00 0.00 2.24
7566 14622 9.760077 CCAAACTTCTGAAACTCTAGTACTAAA 57.240 33.333 3.76 0.00 0.00 1.85
7568 14624 9.478768 AAACTTCTGAAACTCTAGTACTAAAGC 57.521 33.333 3.00 0.00 0.00 3.51
7569 14625 8.179509 ACTTCTGAAACTCTAGTACTAAAGCA 57.820 34.615 3.00 0.00 0.00 3.91
7570 14626 8.639761 ACTTCTGAAACTCTAGTACTAAAGCAA 58.360 33.333 3.00 0.00 0.00 3.91
7571 14627 9.646427 CTTCTGAAACTCTAGTACTAAAGCAAT 57.354 33.333 3.00 0.00 0.00 3.56
7572 14628 8.988064 TCTGAAACTCTAGTACTAAAGCAATG 57.012 34.615 3.00 0.00 0.00 2.82
7573 14629 8.585881 TCTGAAACTCTAGTACTAAAGCAATGT 58.414 33.333 3.00 0.00 0.00 2.71
7574 14630 9.209175 CTGAAACTCTAGTACTAAAGCAATGTT 57.791 33.333 3.00 0.00 0.00 2.71
7575 14631 9.555727 TGAAACTCTAGTACTAAAGCAATGTTT 57.444 29.630 3.00 7.04 0.00 2.83
7602 14658 3.033368 GCTATCAGCTACTAGGTTGGC 57.967 52.381 0.00 0.00 38.45 4.52
7603 14659 2.630580 GCTATCAGCTACTAGGTTGGCT 59.369 50.000 0.00 0.00 38.45 4.75
7604 14660 3.070302 GCTATCAGCTACTAGGTTGGCTT 59.930 47.826 0.00 0.00 38.45 4.35
7605 14661 3.828875 ATCAGCTACTAGGTTGGCTTC 57.171 47.619 0.00 0.00 32.30 3.86
7606 14662 1.831736 TCAGCTACTAGGTTGGCTTCC 59.168 52.381 0.00 0.00 32.30 3.46
7607 14663 1.134371 CAGCTACTAGGTTGGCTTCCC 60.134 57.143 0.00 0.00 32.30 3.97
7608 14664 1.205055 GCTACTAGGTTGGCTTCCCT 58.795 55.000 0.00 0.00 34.74 4.20
7609 14665 2.023307 AGCTACTAGGTTGGCTTCCCTA 60.023 50.000 0.00 0.00 32.08 3.53
7610 14666 2.102757 GCTACTAGGTTGGCTTCCCTAC 59.897 54.545 0.00 0.00 36.31 3.18
7611 14667 2.337359 ACTAGGTTGGCTTCCCTACA 57.663 50.000 0.00 0.00 38.42 2.74
7612 14668 2.188817 ACTAGGTTGGCTTCCCTACAG 58.811 52.381 0.00 0.00 38.42 2.74
7613 14669 0.909623 TAGGTTGGCTTCCCTACAGC 59.090 55.000 0.00 0.00 38.42 4.40
7614 14670 1.133809 AGGTTGGCTTCCCTACAGCA 61.134 55.000 0.00 0.00 38.42 4.41
7615 14671 0.251165 GGTTGGCTTCCCTACAGCAA 60.251 55.000 0.00 0.00 38.42 3.91
7616 14672 1.616994 GGTTGGCTTCCCTACAGCAAT 60.617 52.381 0.00 0.00 38.42 3.56
7617 14673 1.474077 GTTGGCTTCCCTACAGCAATG 59.526 52.381 0.00 0.00 39.21 2.82
7618 14674 0.034186 TGGCTTCCCTACAGCAATGG 60.034 55.000 0.00 0.00 39.21 3.16
7619 14675 0.255890 GGCTTCCCTACAGCAATGGA 59.744 55.000 0.00 0.00 39.21 3.41
7620 14676 1.383523 GCTTCCCTACAGCAATGGAC 58.616 55.000 0.00 0.00 37.22 4.02
7621 14677 1.656652 CTTCCCTACAGCAATGGACG 58.343 55.000 0.00 0.00 0.00 4.79
7622 14678 1.207089 CTTCCCTACAGCAATGGACGA 59.793 52.381 0.00 0.00 0.00 4.20
7623 14679 1.271856 TCCCTACAGCAATGGACGAA 58.728 50.000 0.00 0.00 0.00 3.85
7624 14680 1.626321 TCCCTACAGCAATGGACGAAA 59.374 47.619 0.00 0.00 0.00 3.46
7625 14681 1.737793 CCCTACAGCAATGGACGAAAC 59.262 52.381 0.00 0.00 0.00 2.78
7626 14682 2.615493 CCCTACAGCAATGGACGAAACT 60.615 50.000 0.00 0.00 0.00 2.66
7627 14683 3.369052 CCCTACAGCAATGGACGAAACTA 60.369 47.826 0.00 0.00 0.00 2.24
7628 14684 4.250464 CCTACAGCAATGGACGAAACTAA 58.750 43.478 0.00 0.00 0.00 2.24
7629 14685 4.092968 CCTACAGCAATGGACGAAACTAAC 59.907 45.833 0.00 0.00 0.00 2.34
7630 14686 3.472652 ACAGCAATGGACGAAACTAACA 58.527 40.909 0.00 0.00 0.00 2.41
7631 14687 3.498397 ACAGCAATGGACGAAACTAACAG 59.502 43.478 0.00 0.00 0.00 3.16
7632 14688 3.745975 CAGCAATGGACGAAACTAACAGA 59.254 43.478 0.00 0.00 0.00 3.41
7633 14689 4.393062 CAGCAATGGACGAAACTAACAGAT 59.607 41.667 0.00 0.00 0.00 2.90
7634 14690 4.393062 AGCAATGGACGAAACTAACAGATG 59.607 41.667 0.00 0.00 0.00 2.90
7635 14691 4.391830 GCAATGGACGAAACTAACAGATGA 59.608 41.667 0.00 0.00 0.00 2.92
7636 14692 5.106712 GCAATGGACGAAACTAACAGATGAA 60.107 40.000 0.00 0.00 0.00 2.57
7637 14693 6.567701 GCAATGGACGAAACTAACAGATGAAA 60.568 38.462 0.00 0.00 0.00 2.69
7638 14694 7.359595 CAATGGACGAAACTAACAGATGAAAA 58.640 34.615 0.00 0.00 0.00 2.29
7639 14695 6.295039 TGGACGAAACTAACAGATGAAAAC 57.705 37.500 0.00 0.00 0.00 2.43
7640 14696 6.053005 TGGACGAAACTAACAGATGAAAACT 58.947 36.000 0.00 0.00 0.00 2.66
7641 14697 6.202188 TGGACGAAACTAACAGATGAAAACTC 59.798 38.462 0.00 0.00 0.00 3.01
7642 14698 6.347483 GGACGAAACTAACAGATGAAAACTCC 60.347 42.308 0.00 0.00 0.00 3.85
7643 14699 6.053005 ACGAAACTAACAGATGAAAACTCCA 58.947 36.000 0.00 0.00 0.00 3.86
7644 14700 6.710744 ACGAAACTAACAGATGAAAACTCCAT 59.289 34.615 0.00 0.00 0.00 3.41
7645 14701 7.876068 ACGAAACTAACAGATGAAAACTCCATA 59.124 33.333 0.00 0.00 0.00 2.74
7646 14702 8.383619 CGAAACTAACAGATGAAAACTCCATAG 58.616 37.037 0.00 0.00 0.00 2.23
7647 14703 7.617041 AACTAACAGATGAAAACTCCATAGC 57.383 36.000 0.00 0.00 0.00 2.97
7648 14704 6.116126 ACTAACAGATGAAAACTCCATAGCC 58.884 40.000 0.00 0.00 0.00 3.93
7649 14705 4.574674 ACAGATGAAAACTCCATAGCCA 57.425 40.909 0.00 0.00 0.00 4.75
7650 14706 4.922206 ACAGATGAAAACTCCATAGCCAA 58.078 39.130 0.00 0.00 0.00 4.52
7651 14707 4.946157 ACAGATGAAAACTCCATAGCCAAG 59.054 41.667 0.00 0.00 0.00 3.61
7652 14708 5.188434 CAGATGAAAACTCCATAGCCAAGA 58.812 41.667 0.00 0.00 0.00 3.02
7653 14709 5.826737 CAGATGAAAACTCCATAGCCAAGAT 59.173 40.000 0.00 0.00 0.00 2.40
7654 14710 6.320672 CAGATGAAAACTCCATAGCCAAGATT 59.679 38.462 0.00 0.00 0.00 2.40
7655 14711 5.902613 TGAAAACTCCATAGCCAAGATTG 57.097 39.130 0.00 0.00 0.00 2.67
7656 14712 5.324409 TGAAAACTCCATAGCCAAGATTGT 58.676 37.500 0.00 0.00 0.00 2.71
7657 14713 5.774690 TGAAAACTCCATAGCCAAGATTGTT 59.225 36.000 0.00 0.00 0.00 2.83
7658 14714 5.649782 AAACTCCATAGCCAAGATTGTTG 57.350 39.130 0.00 0.00 0.00 3.33
7659 14715 3.019564 ACTCCATAGCCAAGATTGTTGC 58.980 45.455 0.00 0.00 0.00 4.17
7660 14716 3.285484 CTCCATAGCCAAGATTGTTGCT 58.715 45.455 2.61 2.61 37.84 3.91
7661 14717 3.698040 CTCCATAGCCAAGATTGTTGCTT 59.302 43.478 2.38 0.00 35.34 3.91
7662 14718 3.696051 TCCATAGCCAAGATTGTTGCTTC 59.304 43.478 2.38 0.00 35.34 3.86
7663 14719 3.488047 CCATAGCCAAGATTGTTGCTTCG 60.488 47.826 2.38 0.00 35.34 3.79
7664 14720 0.883833 AGCCAAGATTGTTGCTTCGG 59.116 50.000 0.00 0.00 0.00 4.30
7665 14721 0.598065 GCCAAGATTGTTGCTTCGGT 59.402 50.000 0.00 0.00 0.00 4.69
7666 14722 1.000274 GCCAAGATTGTTGCTTCGGTT 60.000 47.619 0.00 0.00 0.00 4.44
7667 14723 2.227865 GCCAAGATTGTTGCTTCGGTTA 59.772 45.455 0.00 0.00 0.00 2.85
7668 14724 3.119495 GCCAAGATTGTTGCTTCGGTTAT 60.119 43.478 0.00 0.00 0.00 1.89
7669 14725 4.095782 GCCAAGATTGTTGCTTCGGTTATA 59.904 41.667 0.00 0.00 0.00 0.98
7670 14726 5.392595 GCCAAGATTGTTGCTTCGGTTATAA 60.393 40.000 0.00 0.00 0.00 0.98
7671 14727 6.027749 CCAAGATTGTTGCTTCGGTTATAAC 58.972 40.000 7.09 7.09 0.00 1.89
7672 14728 6.128007 CCAAGATTGTTGCTTCGGTTATAACT 60.128 38.462 15.05 0.00 0.00 2.24
7673 14729 6.422776 AGATTGTTGCTTCGGTTATAACTG 57.577 37.500 16.99 16.99 36.62 3.16
7674 14730 4.413495 TTGTTGCTTCGGTTATAACTGC 57.587 40.909 18.08 14.94 35.25 4.40
7675 14731 3.403968 TGTTGCTTCGGTTATAACTGCA 58.596 40.909 18.08 16.88 35.25 4.41
7676 14732 3.435327 TGTTGCTTCGGTTATAACTGCAG 59.565 43.478 18.08 17.47 35.25 4.41
7677 14733 2.739293 GCTTCGGTTATAACTGCAGC 57.261 50.000 26.19 26.19 44.74 5.25
7680 14736 4.458951 CTTCGGTTATAACTGCAGCATC 57.541 45.455 15.27 0.00 35.25 3.91
7681 14737 3.535280 TCGGTTATAACTGCAGCATCA 57.465 42.857 15.27 0.00 35.25 3.07
7682 14738 3.194861 TCGGTTATAACTGCAGCATCAC 58.805 45.455 15.27 8.98 35.25 3.06
7683 14739 2.287915 CGGTTATAACTGCAGCATCACC 59.712 50.000 15.27 16.31 0.00 4.02
7684 14740 2.287915 GGTTATAACTGCAGCATCACCG 59.712 50.000 15.27 0.00 0.00 4.94
7685 14741 1.581934 TATAACTGCAGCATCACCGC 58.418 50.000 15.27 0.00 0.00 5.68
7686 14742 1.097547 ATAACTGCAGCATCACCGCC 61.098 55.000 15.27 0.00 0.00 6.13
7689 14745 4.429522 TGCAGCATCACCGCCCAT 62.430 61.111 0.00 0.00 0.00 4.00
7690 14746 3.896133 GCAGCATCACCGCCCATG 61.896 66.667 0.00 0.00 0.00 3.66
7691 14747 2.438975 CAGCATCACCGCCCATGT 60.439 61.111 0.00 0.00 0.00 3.21
7692 14748 1.153188 CAGCATCACCGCCCATGTA 60.153 57.895 0.00 0.00 0.00 2.29
7693 14749 0.535780 CAGCATCACCGCCCATGTAT 60.536 55.000 0.00 0.00 0.00 2.29
7694 14750 0.535780 AGCATCACCGCCCATGTATG 60.536 55.000 0.00 0.00 0.00 2.39
7695 14751 1.951510 CATCACCGCCCATGTATGC 59.048 57.895 0.00 0.00 0.00 3.14
7696 14752 1.228245 ATCACCGCCCATGTATGCC 60.228 57.895 0.00 0.00 0.00 4.40
7697 14753 1.708993 ATCACCGCCCATGTATGCCT 61.709 55.000 0.00 0.00 0.00 4.75
7698 14754 1.893808 CACCGCCCATGTATGCCTC 60.894 63.158 0.00 0.00 0.00 4.70
7699 14755 2.072487 ACCGCCCATGTATGCCTCT 61.072 57.895 0.00 0.00 0.00 3.69
7700 14756 1.598962 CCGCCCATGTATGCCTCTG 60.599 63.158 0.00 0.00 0.00 3.35
7701 14757 1.598962 CGCCCATGTATGCCTCTGG 60.599 63.158 0.00 0.00 0.00 3.86
7703 14759 2.234586 CCCATGTATGCCTCTGGGT 58.765 57.895 5.38 0.00 42.87 4.51
7704 14760 0.552848 CCCATGTATGCCTCTGGGTT 59.447 55.000 5.38 0.00 42.87 4.11
7705 14761 1.063717 CCCATGTATGCCTCTGGGTTT 60.064 52.381 5.38 0.00 42.87 3.27
7706 14762 2.026641 CCATGTATGCCTCTGGGTTTG 58.973 52.381 0.00 0.00 34.45 2.93
7707 14763 2.357050 CCATGTATGCCTCTGGGTTTGA 60.357 50.000 0.00 0.00 34.45 2.69
7708 14764 3.355378 CATGTATGCCTCTGGGTTTGAA 58.645 45.455 0.00 0.00 34.45 2.69
7709 14765 3.071874 TGTATGCCTCTGGGTTTGAAG 57.928 47.619 0.00 0.00 34.45 3.02
7710 14766 1.745653 GTATGCCTCTGGGTTTGAAGC 59.254 52.381 0.00 0.00 34.45 3.86
7711 14767 0.613012 ATGCCTCTGGGTTTGAAGCC 60.613 55.000 5.04 5.04 46.58 4.35
7717 14773 2.282180 GGGTTTGAAGCCGCCTCA 60.282 61.111 0.00 0.00 36.76 3.86
7718 14774 1.901464 GGGTTTGAAGCCGCCTCAA 60.901 57.895 0.00 0.00 36.76 3.02
7719 14775 1.581447 GGTTTGAAGCCGCCTCAAG 59.419 57.895 4.64 0.00 0.00 3.02
7720 14776 0.889186 GGTTTGAAGCCGCCTCAAGA 60.889 55.000 4.64 0.00 0.00 3.02
7721 14777 0.519077 GTTTGAAGCCGCCTCAAGAG 59.481 55.000 4.64 0.00 0.00 2.85
7722 14778 1.237285 TTTGAAGCCGCCTCAAGAGC 61.237 55.000 4.64 0.00 0.00 4.09
7723 14779 2.046892 GAAGCCGCCTCAAGAGCA 60.047 61.111 0.00 0.00 0.00 4.26
7724 14780 1.451028 GAAGCCGCCTCAAGAGCAT 60.451 57.895 0.00 0.00 0.00 3.79
7725 14781 1.001641 AAGCCGCCTCAAGAGCATT 60.002 52.632 0.00 0.00 0.00 3.56
7726 14782 1.028868 AAGCCGCCTCAAGAGCATTC 61.029 55.000 0.00 0.00 0.00 2.67
7727 14783 1.746615 GCCGCCTCAAGAGCATTCA 60.747 57.895 0.00 0.00 0.00 2.57
7728 14784 1.712977 GCCGCCTCAAGAGCATTCAG 61.713 60.000 0.00 0.00 0.00 3.02
7729 14785 1.094073 CCGCCTCAAGAGCATTCAGG 61.094 60.000 0.00 0.00 0.00 3.86
7730 14786 1.712977 CGCCTCAAGAGCATTCAGGC 61.713 60.000 6.53 6.53 45.39 4.85
7732 14788 1.134280 GCCTCAAGAGCATTCAGGCTA 60.134 52.381 9.00 0.00 45.99 3.93
7733 14789 2.486907 GCCTCAAGAGCATTCAGGCTAT 60.487 50.000 9.00 0.00 45.99 2.97
7734 14790 3.401182 CCTCAAGAGCATTCAGGCTATC 58.599 50.000 0.00 0.00 45.99 2.08
7735 14791 3.058450 CTCAAGAGCATTCAGGCTATCG 58.942 50.000 0.00 0.00 45.99 2.92
7736 14792 2.141517 CAAGAGCATTCAGGCTATCGG 58.858 52.381 0.00 0.00 45.99 4.18
7737 14793 1.709578 AGAGCATTCAGGCTATCGGA 58.290 50.000 0.00 0.00 45.99 4.55
7738 14794 2.255406 AGAGCATTCAGGCTATCGGAT 58.745 47.619 0.00 0.00 45.99 4.18
7739 14795 2.636893 AGAGCATTCAGGCTATCGGATT 59.363 45.455 0.00 0.00 45.99 3.01
7740 14796 2.999355 GAGCATTCAGGCTATCGGATTC 59.001 50.000 0.00 0.00 45.99 2.52
7741 14797 2.369860 AGCATTCAGGCTATCGGATTCA 59.630 45.455 0.00 0.00 43.70 2.57
7742 14798 3.141398 GCATTCAGGCTATCGGATTCAA 58.859 45.455 0.00 0.00 0.00 2.69
7743 14799 3.755378 GCATTCAGGCTATCGGATTCAAT 59.245 43.478 0.00 0.00 0.00 2.57
7744 14800 4.937620 GCATTCAGGCTATCGGATTCAATA 59.062 41.667 0.00 0.00 0.00 1.90
7745 14801 5.412594 GCATTCAGGCTATCGGATTCAATAA 59.587 40.000 0.00 0.00 0.00 1.40
7746 14802 6.621596 GCATTCAGGCTATCGGATTCAATAAC 60.622 42.308 0.00 0.00 0.00 1.89
7747 14803 5.545063 TCAGGCTATCGGATTCAATAACA 57.455 39.130 0.00 0.00 0.00 2.41
7748 14804 5.924356 TCAGGCTATCGGATTCAATAACAA 58.076 37.500 0.00 0.00 0.00 2.83
7749 14805 6.533730 TCAGGCTATCGGATTCAATAACAAT 58.466 36.000 0.00 0.00 0.00 2.71
7750 14806 6.998074 TCAGGCTATCGGATTCAATAACAATT 59.002 34.615 0.00 0.00 0.00 2.32
7751 14807 7.502226 TCAGGCTATCGGATTCAATAACAATTT 59.498 33.333 0.00 0.00 0.00 1.82
7752 14808 8.137437 CAGGCTATCGGATTCAATAACAATTTT 58.863 33.333 0.00 0.00 0.00 1.82
7753 14809 8.137437 AGGCTATCGGATTCAATAACAATTTTG 58.863 33.333 0.00 0.00 0.00 2.44
7754 14810 7.382218 GGCTATCGGATTCAATAACAATTTTGG 59.618 37.037 0.00 0.00 0.00 3.28
7755 14811 7.920682 GCTATCGGATTCAATAACAATTTTGGT 59.079 33.333 0.00 0.00 0.00 3.67
7756 14812 9.236691 CTATCGGATTCAATAACAATTTTGGTG 57.763 33.333 0.00 0.00 0.00 4.17
7757 14813 5.866633 TCGGATTCAATAACAATTTTGGTGC 59.133 36.000 0.00 0.00 0.00 5.01
7758 14814 5.636965 CGGATTCAATAACAATTTTGGTGCA 59.363 36.000 0.00 0.00 0.00 4.57
7759 14815 6.313411 CGGATTCAATAACAATTTTGGTGCAT 59.687 34.615 0.00 0.00 0.00 3.96
7760 14816 7.464444 CGGATTCAATAACAATTTTGGTGCATC 60.464 37.037 0.00 0.00 0.00 3.91
7761 14817 7.201635 GGATTCAATAACAATTTTGGTGCATCC 60.202 37.037 0.00 0.00 0.00 3.51
7762 14818 6.106648 TCAATAACAATTTTGGTGCATCCA 57.893 33.333 0.00 0.00 45.60 3.41
7770 14826 2.550487 TGGTGCATCCAACGTTAGC 58.450 52.632 0.00 3.82 44.12 3.09
7771 14827 0.250510 TGGTGCATCCAACGTTAGCA 60.251 50.000 0.00 6.64 44.12 3.49
7772 14828 0.447801 GGTGCATCCAACGTTAGCAG 59.552 55.000 14.50 2.27 35.66 4.24
7773 14829 0.179189 GTGCATCCAACGTTAGCAGC 60.179 55.000 14.50 11.15 35.66 5.25
7774 14830 0.605050 TGCATCCAACGTTAGCAGCA 60.605 50.000 0.00 7.02 0.00 4.41
7775 14831 0.521291 GCATCCAACGTTAGCAGCAA 59.479 50.000 0.00 0.00 0.00 3.91
7776 14832 1.466360 GCATCCAACGTTAGCAGCAAG 60.466 52.381 0.00 0.00 0.00 4.01
7777 14833 2.076100 CATCCAACGTTAGCAGCAAGA 58.924 47.619 0.00 0.00 0.00 3.02
7778 14834 2.248280 TCCAACGTTAGCAGCAAGAA 57.752 45.000 0.00 0.00 0.00 2.52
7779 14835 2.778299 TCCAACGTTAGCAGCAAGAAT 58.222 42.857 0.00 0.00 0.00 2.40
7780 14836 3.932822 TCCAACGTTAGCAGCAAGAATA 58.067 40.909 0.00 0.00 0.00 1.75
7781 14837 4.320023 TCCAACGTTAGCAGCAAGAATAA 58.680 39.130 0.00 0.00 0.00 1.40
7782 14838 4.391830 TCCAACGTTAGCAGCAAGAATAAG 59.608 41.667 0.00 0.00 0.00 1.73
7783 14839 4.154195 CCAACGTTAGCAGCAAGAATAAGT 59.846 41.667 0.00 0.00 0.00 2.24
7784 14840 5.316770 CAACGTTAGCAGCAAGAATAAGTC 58.683 41.667 0.00 0.00 0.00 3.01
7785 14841 3.933332 ACGTTAGCAGCAAGAATAAGTCC 59.067 43.478 0.00 0.00 0.00 3.85
7786 14842 3.932710 CGTTAGCAGCAAGAATAAGTCCA 59.067 43.478 0.00 0.00 0.00 4.02
7787 14843 4.391830 CGTTAGCAGCAAGAATAAGTCCAA 59.608 41.667 0.00 0.00 0.00 3.53
7788 14844 5.106712 CGTTAGCAGCAAGAATAAGTCCAAA 60.107 40.000 0.00 0.00 0.00 3.28
7789 14845 4.773323 AGCAGCAAGAATAAGTCCAAAC 57.227 40.909 0.00 0.00 0.00 2.93
7790 14846 3.507622 AGCAGCAAGAATAAGTCCAAACC 59.492 43.478 0.00 0.00 0.00 3.27
7791 14847 3.507622 GCAGCAAGAATAAGTCCAAACCT 59.492 43.478 0.00 0.00 0.00 3.50
7792 14848 4.616835 GCAGCAAGAATAAGTCCAAACCTG 60.617 45.833 0.00 0.00 0.00 4.00
7793 14849 4.761739 CAGCAAGAATAAGTCCAAACCTGA 59.238 41.667 0.00 0.00 0.00 3.86
7794 14850 5.416952 CAGCAAGAATAAGTCCAAACCTGAT 59.583 40.000 0.00 0.00 0.00 2.90
7795 14851 6.012745 AGCAAGAATAAGTCCAAACCTGATT 58.987 36.000 0.00 0.00 0.00 2.57
7796 14852 6.071728 AGCAAGAATAAGTCCAAACCTGATTG 60.072 38.462 0.00 0.00 0.00 2.67
7797 14853 5.904362 AGAATAAGTCCAAACCTGATTGC 57.096 39.130 0.00 0.00 0.00 3.56
7798 14854 5.324409 AGAATAAGTCCAAACCTGATTGCA 58.676 37.500 0.00 0.00 0.00 4.08
7799 14855 5.954150 AGAATAAGTCCAAACCTGATTGCAT 59.046 36.000 0.00 0.00 0.00 3.96
7800 14856 7.118723 AGAATAAGTCCAAACCTGATTGCATA 58.881 34.615 0.00 0.00 0.00 3.14
7801 14857 7.781693 AGAATAAGTCCAAACCTGATTGCATAT 59.218 33.333 0.00 0.00 0.00 1.78
7802 14858 8.995027 AATAAGTCCAAACCTGATTGCATATA 57.005 30.769 0.00 0.00 0.00 0.86
7803 14859 9.592196 AATAAGTCCAAACCTGATTGCATATAT 57.408 29.630 0.00 0.00 0.00 0.86
7804 14860 7.902920 AAGTCCAAACCTGATTGCATATATT 57.097 32.000 0.00 0.00 0.00 1.28
7805 14861 7.902920 AGTCCAAACCTGATTGCATATATTT 57.097 32.000 0.00 0.00 0.00 1.40
7806 14862 7.945134 AGTCCAAACCTGATTGCATATATTTC 58.055 34.615 0.00 0.00 0.00 2.17
7807 14863 7.781693 AGTCCAAACCTGATTGCATATATTTCT 59.218 33.333 0.00 0.00 0.00 2.52
7808 14864 7.864379 GTCCAAACCTGATTGCATATATTTCTG 59.136 37.037 0.00 0.00 0.00 3.02
7809 14865 6.643770 CCAAACCTGATTGCATATATTTCTGC 59.356 38.462 0.00 0.00 38.87 4.26
7810 14866 5.618056 ACCTGATTGCATATATTTCTGCG 57.382 39.130 0.00 0.00 41.32 5.18
7811 14867 4.456911 ACCTGATTGCATATATTTCTGCGG 59.543 41.667 0.00 0.00 41.32 5.69
7812 14868 4.696877 CCTGATTGCATATATTTCTGCGGA 59.303 41.667 0.00 0.00 41.32 5.54
7813 14869 5.181811 CCTGATTGCATATATTTCTGCGGAA 59.818 40.000 3.13 3.13 41.32 4.30
7814 14870 6.127814 CCTGATTGCATATATTTCTGCGGAAT 60.128 38.462 9.22 2.30 41.32 3.01
7815 14871 7.218228 TGATTGCATATATTTCTGCGGAATT 57.782 32.000 9.22 8.37 41.32 2.17
7816 14872 7.660112 TGATTGCATATATTTCTGCGGAATTT 58.340 30.769 9.22 2.65 41.32 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 170 1.185315 CCGGTCAAAATTGGATGCCT 58.815 50.000 0.00 0.00 0.00 4.75
188 191 4.032310 AGGATGTGAGAGCTTGAGAAGAT 58.968 43.478 0.00 0.00 0.00 2.40
265 323 6.756299 AATTTGTTGGCACAGTCAAAATTT 57.244 29.167 9.24 0.00 42.92 1.82
466 550 0.322366 TGCGATGATTTGGTGAGCCA 60.322 50.000 0.00 0.00 44.38 4.75
498 583 1.556451 TGGGAGATGATGGAGTGTGTG 59.444 52.381 0.00 0.00 0.00 3.82
518 608 7.888021 TGATGGAATATTTAGTTTGACAGGTGT 59.112 33.333 0.00 0.00 0.00 4.16
595 694 4.655963 TCTTGCTCTAAGCTTGGTCAAAT 58.344 39.130 9.86 0.00 42.97 2.32
786 951 4.211125 TGTTGGTGTTGCTAGATTTTCCA 58.789 39.130 0.00 0.00 0.00 3.53
789 954 4.606961 CGTTGTTGGTGTTGCTAGATTTT 58.393 39.130 0.00 0.00 0.00 1.82
797 1241 0.734253 TGTTGCGTTGTTGGTGTTGC 60.734 50.000 0.00 0.00 0.00 4.17
844 1288 7.987458 TCGCAAGATCTTTATTTCTGGAGTTAT 59.013 33.333 4.86 0.00 45.01 1.89
845 1289 7.327975 TCGCAAGATCTTTATTTCTGGAGTTA 58.672 34.615 4.86 0.00 45.01 2.24
847 1291 5.734720 TCGCAAGATCTTTATTTCTGGAGT 58.265 37.500 4.86 0.00 45.01 3.85
865 1309 0.958876 TCCTACTCTCTGCGTCGCAA 60.959 55.000 22.01 11.17 38.41 4.85
934 1387 0.867746 TCAGATTTGCGTCTGTGCAC 59.132 50.000 10.75 10.75 46.25 4.57
935 1388 1.264020 GTTCAGATTTGCGTCTGTGCA 59.736 47.619 11.73 0.00 44.66 4.57
940 1393 3.983344 GCAATTTGTTCAGATTTGCGTCT 59.017 39.130 0.00 0.00 0.00 4.18
944 1397 5.910637 TTCTGCAATTTGTTCAGATTTGC 57.089 34.783 7.32 0.00 36.81 3.68
951 1409 3.703556 TGGGAGTTTCTGCAATTTGTTCA 59.296 39.130 0.00 0.00 0.00 3.18
1086 1544 4.980805 TGAGGGGACGCGCACAAC 62.981 66.667 5.73 0.00 0.00 3.32
1261 1720 0.735287 GAAGCCGAACGTACCAGGTC 60.735 60.000 0.00 0.00 0.00 3.85
1265 1724 0.038892 GTGAGAAGCCGAACGTACCA 60.039 55.000 0.00 0.00 0.00 3.25
1310 1770 4.297299 TGAGTCAAAAGAAGCAGCAAAG 57.703 40.909 0.00 0.00 0.00 2.77
1341 1801 0.033601 TCACATTCCCAAATCCCGGG 60.034 55.000 16.85 16.85 46.03 5.73
1344 1804 0.455815 GCGTCACATTCCCAAATCCC 59.544 55.000 0.00 0.00 0.00 3.85
1414 2014 4.816385 TGTGCAGGTTGAAAAGACTCTAAG 59.184 41.667 0.00 0.00 0.00 2.18
1466 2070 4.036518 AGGACAGACATTCTAGGAGCAAT 58.963 43.478 0.00 0.00 0.00 3.56
1467 2071 3.445008 AGGACAGACATTCTAGGAGCAA 58.555 45.455 0.00 0.00 0.00 3.91
1468 2072 3.107402 AGGACAGACATTCTAGGAGCA 57.893 47.619 0.00 0.00 0.00 4.26
1469 2073 4.479786 AAAGGACAGACATTCTAGGAGC 57.520 45.455 0.00 0.00 0.00 4.70
1488 2092 1.606313 GCAGGGGCAGCCTACAAAA 60.606 57.895 12.43 0.00 40.72 2.44
1513 2120 4.797275 GCCAAACAATCCAAACTTCCTGAG 60.797 45.833 0.00 0.00 0.00 3.35
1539 2146 2.232452 CCATATCGAGGGCAAGTCCTAG 59.768 54.545 0.00 0.00 37.25 3.02
1584 2590 3.930504 GGCTCTGCCCCTGATTTG 58.069 61.111 0.00 0.00 44.06 2.32
1625 2631 3.430333 TCCTTGGTTGTTTTTCGCTTC 57.570 42.857 0.00 0.00 0.00 3.86
1710 2717 7.648142 TGTCCAATTAATTCAACTTCTGTGAC 58.352 34.615 0.00 0.00 0.00 3.67
1746 2753 1.371183 CACAGAGGGTCTTCGGCAA 59.629 57.895 0.00 0.00 0.00 4.52
1785 2792 7.217041 ATTGACTCCAACACGAATTTTCGCA 62.217 40.000 12.31 0.00 43.71 5.10
1917 2925 1.967319 ACGTCTTGTGGCATTTGAGT 58.033 45.000 0.00 0.00 0.00 3.41
2043 3291 2.265367 TCTCTGCAAGGGGTTGATACA 58.735 47.619 0.00 0.00 32.73 2.29
2262 3512 6.715280 AGTTCTAGATCCACACATCAACATT 58.285 36.000 0.00 0.00 0.00 2.71
2297 3547 9.130661 TCAAAACTCTAATCCACTTCATGAAAA 57.869 29.630 9.88 0.00 0.00 2.29
2442 3692 9.869757 AACAAAATAAATACCTAACTGGCATTC 57.130 29.630 0.00 0.00 40.22 2.67
2508 3759 4.354587 GTCAACCTGCTTTGTTCTGAAAG 58.645 43.478 0.00 0.00 36.23 2.62
2948 5060 0.608035 TGCCATTCCGTTCCACTTCC 60.608 55.000 0.00 0.00 0.00 3.46
4406 7258 3.982475 TGAGAATATCATCGTGCCTGAC 58.018 45.455 0.00 0.00 31.12 3.51
4462 7314 7.670979 TGGAGATCAAAATGAGGAAATCTTTCA 59.329 33.333 5.14 0.00 38.92 2.69
4857 7709 4.177783 GTTTGCAACGAAAGGGAAAAGAA 58.822 39.130 0.00 0.00 0.00 2.52
5321 8436 6.732896 ATACATACCACTTCTGAAGGGTAG 57.267 41.667 26.88 22.52 37.57 3.18
5344 8459 9.492973 GTGAAAGGGTAACAAATGTAGTACTAA 57.507 33.333 3.61 0.00 39.74 2.24
5504 8627 1.616374 TCACTTGACGTGCTGGACATA 59.384 47.619 0.00 0.00 43.46 2.29
6101 9224 3.491342 TGTTCCCTGGAGAGAGATATCG 58.509 50.000 0.00 0.00 0.00 2.92
6375 9498 9.708222 CGAAAATTGTATGATTTACTCAGGAAG 57.292 33.333 0.00 0.00 37.28 3.46
6378 9501 9.277565 CAACGAAAATTGTATGATTTACTCAGG 57.722 33.333 0.00 0.00 37.28 3.86
6401 9524 1.604604 TGTTCCTGCAGTTAGCCAAC 58.395 50.000 13.81 6.04 44.83 3.77
6803 9928 6.936900 CACCTTCCTATCTCACTGAAAGAAAA 59.063 38.462 0.00 0.00 37.43 2.29
6890 10015 5.862924 AAGTAACATTCATCCAACTGTCG 57.137 39.130 0.00 0.00 0.00 4.35
6891 10016 6.183360 CGGTAAGTAACATTCATCCAACTGTC 60.183 42.308 0.00 0.00 0.00 3.51
6892 10017 5.642063 CGGTAAGTAACATTCATCCAACTGT 59.358 40.000 0.00 0.00 0.00 3.55
6893 10018 5.872617 TCGGTAAGTAACATTCATCCAACTG 59.127 40.000 0.00 0.00 0.00 3.16
6894 10019 5.873164 GTCGGTAAGTAACATTCATCCAACT 59.127 40.000 0.00 0.00 0.00 3.16
6895 10020 5.640357 TGTCGGTAAGTAACATTCATCCAAC 59.360 40.000 0.00 0.00 0.00 3.77
6896 10021 5.795972 TGTCGGTAAGTAACATTCATCCAA 58.204 37.500 0.00 0.00 0.00 3.53
6897 10022 5.046878 ACTGTCGGTAAGTAACATTCATCCA 60.047 40.000 0.00 0.00 0.00 3.41
6898 10023 5.416947 ACTGTCGGTAAGTAACATTCATCC 58.583 41.667 0.00 0.00 0.00 3.51
6899 10024 6.183360 CCAACTGTCGGTAAGTAACATTCATC 60.183 42.308 0.00 0.00 0.00 2.92
6900 10025 5.642063 CCAACTGTCGGTAAGTAACATTCAT 59.358 40.000 0.00 0.00 0.00 2.57
6901 10026 4.992319 CCAACTGTCGGTAAGTAACATTCA 59.008 41.667 0.00 0.00 0.00 2.57
6902 10027 5.232463 TCCAACTGTCGGTAAGTAACATTC 58.768 41.667 0.00 0.00 0.00 2.67
6903 10028 5.217978 TCCAACTGTCGGTAAGTAACATT 57.782 39.130 0.00 0.00 0.00 2.71
6904 10029 4.877378 TCCAACTGTCGGTAAGTAACAT 57.123 40.909 0.00 0.00 0.00 2.71
6905 10030 4.281435 TCATCCAACTGTCGGTAAGTAACA 59.719 41.667 0.00 0.00 0.00 2.41
6906 10031 4.813027 TCATCCAACTGTCGGTAAGTAAC 58.187 43.478 0.00 0.00 0.00 2.50
6907 10032 5.471556 TTCATCCAACTGTCGGTAAGTAA 57.528 39.130 0.00 0.00 0.00 2.24
6908 10033 5.046878 ACATTCATCCAACTGTCGGTAAGTA 60.047 40.000 0.00 0.00 0.00 2.24
6909 10034 4.253685 CATTCATCCAACTGTCGGTAAGT 58.746 43.478 0.00 0.00 0.00 2.24
6910 10035 4.253685 ACATTCATCCAACTGTCGGTAAG 58.746 43.478 0.00 0.00 0.00 2.34
6911 10036 4.280436 ACATTCATCCAACTGTCGGTAA 57.720 40.909 0.00 0.00 0.00 2.85
6912 10037 3.973206 ACATTCATCCAACTGTCGGTA 57.027 42.857 0.00 0.00 0.00 4.02
6913 10038 2.813754 CAACATTCATCCAACTGTCGGT 59.186 45.455 0.00 0.00 0.00 4.69
6914 10039 2.162208 CCAACATTCATCCAACTGTCGG 59.838 50.000 0.00 0.00 0.00 4.79
6915 10040 3.073678 TCCAACATTCATCCAACTGTCG 58.926 45.455 0.00 0.00 0.00 4.35
7100 10352 9.234827 TCAGTGAACAATTATGATGATTTGTCT 57.765 29.630 0.00 0.00 0.00 3.41
7171 14227 1.546589 AACGGCATCCCCTACGTTCA 61.547 55.000 0.00 0.00 45.15 3.18
7221 14277 0.108520 GTCATCCGCGGACTAAACCA 60.109 55.000 33.75 5.46 32.54 3.67
7397 14453 2.236395 AGTCTGCCATGTGGTTACCTAC 59.764 50.000 2.07 0.00 37.57 3.18
7398 14454 2.236146 CAGTCTGCCATGTGGTTACCTA 59.764 50.000 2.07 0.00 37.57 3.08
7399 14455 1.003580 CAGTCTGCCATGTGGTTACCT 59.996 52.381 2.07 0.00 37.57 3.08
7400 14456 1.003118 TCAGTCTGCCATGTGGTTACC 59.997 52.381 0.00 0.00 37.57 2.85
7401 14457 2.350522 CTCAGTCTGCCATGTGGTTAC 58.649 52.381 0.35 0.00 37.57 2.50
7402 14458 1.339055 GCTCAGTCTGCCATGTGGTTA 60.339 52.381 0.35 0.00 37.57 2.85
7403 14459 0.607489 GCTCAGTCTGCCATGTGGTT 60.607 55.000 0.35 0.00 37.57 3.67
7404 14460 1.002868 GCTCAGTCTGCCATGTGGT 60.003 57.895 0.35 0.00 37.57 4.16
7405 14461 0.322277 AAGCTCAGTCTGCCATGTGG 60.322 55.000 0.00 0.00 38.53 4.17
7406 14462 0.803117 CAAGCTCAGTCTGCCATGTG 59.197 55.000 0.00 0.00 0.00 3.21
7407 14463 0.399454 ACAAGCTCAGTCTGCCATGT 59.601 50.000 0.00 0.00 0.00 3.21
7408 14464 0.803117 CACAAGCTCAGTCTGCCATG 59.197 55.000 0.00 0.00 0.00 3.66
7409 14465 0.399454 ACACAAGCTCAGTCTGCCAT 59.601 50.000 0.00 0.00 0.00 4.40
7410 14466 0.181114 AACACAAGCTCAGTCTGCCA 59.819 50.000 0.00 0.00 0.00 4.92
7411 14467 1.801178 GTAACACAAGCTCAGTCTGCC 59.199 52.381 0.00 0.00 0.00 4.85
7412 14468 2.483876 TGTAACACAAGCTCAGTCTGC 58.516 47.619 0.00 0.00 0.00 4.26
7413 14469 5.679734 ATTTGTAACACAAGCTCAGTCTG 57.320 39.130 0.00 0.00 39.53 3.51
7414 14470 5.934625 CCTATTTGTAACACAAGCTCAGTCT 59.065 40.000 0.00 0.00 39.53 3.24
7415 14471 5.122396 CCCTATTTGTAACACAAGCTCAGTC 59.878 44.000 0.00 0.00 39.53 3.51
7416 14472 5.003804 CCCTATTTGTAACACAAGCTCAGT 58.996 41.667 0.00 0.00 39.53 3.41
7417 14473 5.003804 ACCCTATTTGTAACACAAGCTCAG 58.996 41.667 0.00 0.00 39.53 3.35
7418 14474 4.980573 ACCCTATTTGTAACACAAGCTCA 58.019 39.130 0.00 0.00 39.53 4.26
7419 14475 5.585047 CCTACCCTATTTGTAACACAAGCTC 59.415 44.000 0.00 0.00 39.53 4.09
7420 14476 5.013808 ACCTACCCTATTTGTAACACAAGCT 59.986 40.000 0.00 0.00 39.53 3.74
7421 14477 5.250982 ACCTACCCTATTTGTAACACAAGC 58.749 41.667 0.00 0.00 39.53 4.01
7422 14478 8.889717 CATTACCTACCCTATTTGTAACACAAG 58.110 37.037 0.00 0.00 39.53 3.16
7423 14479 8.384718 ACATTACCTACCCTATTTGTAACACAA 58.615 33.333 0.00 0.00 36.11 3.33
7424 14480 7.920227 ACATTACCTACCCTATTTGTAACACA 58.080 34.615 0.00 0.00 0.00 3.72
7425 14481 8.797350 AACATTACCTACCCTATTTGTAACAC 57.203 34.615 0.00 0.00 0.00 3.32
7426 14482 9.810870 AAAACATTACCTACCCTATTTGTAACA 57.189 29.630 0.00 0.00 0.00 2.41
7467 14523 9.527157 TGGTCATCATTTGAGGAATAAAAGTTA 57.473 29.630 0.00 0.00 36.56 2.24
7468 14524 8.421249 TGGTCATCATTTGAGGAATAAAAGTT 57.579 30.769 0.00 0.00 36.56 2.66
7469 14525 8.421249 TTGGTCATCATTTGAGGAATAAAAGT 57.579 30.769 0.00 0.00 36.56 2.66
7470 14526 9.880157 ATTTGGTCATCATTTGAGGAATAAAAG 57.120 29.630 0.00 0.00 36.56 2.27
7471 14527 9.874205 GATTTGGTCATCATTTGAGGAATAAAA 57.126 29.630 0.00 0.00 36.56 1.52
7472 14528 8.190122 CGATTTGGTCATCATTTGAGGAATAAA 58.810 33.333 0.00 2.86 36.56 1.40
7473 14529 7.339212 ACGATTTGGTCATCATTTGAGGAATAA 59.661 33.333 0.00 0.00 36.56 1.40
7474 14530 6.828273 ACGATTTGGTCATCATTTGAGGAATA 59.172 34.615 0.00 0.00 36.56 1.75
7475 14531 5.653769 ACGATTTGGTCATCATTTGAGGAAT 59.346 36.000 0.00 0.00 36.56 3.01
7476 14532 5.009631 ACGATTTGGTCATCATTTGAGGAA 58.990 37.500 0.00 0.00 36.56 3.36
7477 14533 4.588899 ACGATTTGGTCATCATTTGAGGA 58.411 39.130 0.00 0.00 34.17 3.71
7478 14534 4.970662 ACGATTTGGTCATCATTTGAGG 57.029 40.909 0.00 0.00 34.17 3.86
7479 14535 7.304735 TGTAAACGATTTGGTCATCATTTGAG 58.695 34.615 0.00 0.00 34.17 3.02
7480 14536 7.208225 TGTAAACGATTTGGTCATCATTTGA 57.792 32.000 0.00 0.00 0.00 2.69
7481 14537 7.865875 TTGTAAACGATTTGGTCATCATTTG 57.134 32.000 0.00 0.00 0.00 2.32
7482 14538 9.487790 AAATTGTAAACGATTTGGTCATCATTT 57.512 25.926 7.39 0.00 38.25 2.32
7483 14539 9.487790 AAAATTGTAAACGATTTGGTCATCATT 57.512 25.926 8.70 0.00 39.29 2.57
7484 14540 9.487790 AAAAATTGTAAACGATTTGGTCATCAT 57.512 25.926 8.70 0.00 39.29 2.45
7485 14541 8.759641 CAAAAATTGTAAACGATTTGGTCATCA 58.240 29.630 8.70 0.00 39.29 3.07
7486 14542 8.220434 CCAAAAATTGTAAACGATTTGGTCATC 58.780 33.333 8.70 0.00 39.41 2.92
7487 14543 7.928706 TCCAAAAATTGTAAACGATTTGGTCAT 59.071 29.630 13.08 0.00 42.26 3.06
7488 14544 7.265673 TCCAAAAATTGTAAACGATTTGGTCA 58.734 30.769 13.08 0.00 42.26 4.02
7489 14545 7.701809 TCCAAAAATTGTAAACGATTTGGTC 57.298 32.000 13.08 0.00 42.26 4.02
7490 14546 7.982354 TCTTCCAAAAATTGTAAACGATTTGGT 59.018 29.630 13.08 0.00 42.26 3.67
7491 14547 8.359060 TCTTCCAAAAATTGTAAACGATTTGG 57.641 30.769 8.70 8.42 42.64 3.28
7502 14558 8.150296 CCCTGACTTTATTCTTCCAAAAATTGT 58.850 33.333 0.00 0.00 0.00 2.71
7503 14559 7.603784 CCCCTGACTTTATTCTTCCAAAAATTG 59.396 37.037 0.00 0.00 0.00 2.32
7504 14560 7.256655 CCCCCTGACTTTATTCTTCCAAAAATT 60.257 37.037 0.00 0.00 0.00 1.82
7505 14561 6.213397 CCCCCTGACTTTATTCTTCCAAAAAT 59.787 38.462 0.00 0.00 0.00 1.82
7506 14562 5.542251 CCCCCTGACTTTATTCTTCCAAAAA 59.458 40.000 0.00 0.00 0.00 1.94
7507 14563 5.083821 CCCCCTGACTTTATTCTTCCAAAA 58.916 41.667 0.00 0.00 0.00 2.44
7508 14564 4.355588 TCCCCCTGACTTTATTCTTCCAAA 59.644 41.667 0.00 0.00 0.00 3.28
7509 14565 3.920197 TCCCCCTGACTTTATTCTTCCAA 59.080 43.478 0.00 0.00 0.00 3.53
7510 14566 3.537337 TCCCCCTGACTTTATTCTTCCA 58.463 45.455 0.00 0.00 0.00 3.53
7511 14567 4.586306 TTCCCCCTGACTTTATTCTTCC 57.414 45.455 0.00 0.00 0.00 3.46
7512 14568 4.950475 CCTTTCCCCCTGACTTTATTCTTC 59.050 45.833 0.00 0.00 0.00 2.87
7513 14569 4.606255 TCCTTTCCCCCTGACTTTATTCTT 59.394 41.667 0.00 0.00 0.00 2.52
7514 14570 4.183916 TCCTTTCCCCCTGACTTTATTCT 58.816 43.478 0.00 0.00 0.00 2.40
7515 14571 4.586306 TCCTTTCCCCCTGACTTTATTC 57.414 45.455 0.00 0.00 0.00 1.75
7516 14572 5.519808 GATTCCTTTCCCCCTGACTTTATT 58.480 41.667 0.00 0.00 0.00 1.40
7517 14573 4.079154 GGATTCCTTTCCCCCTGACTTTAT 60.079 45.833 0.00 0.00 0.00 1.40
7518 14574 3.268595 GGATTCCTTTCCCCCTGACTTTA 59.731 47.826 0.00 0.00 0.00 1.85
7519 14575 2.043115 GGATTCCTTTCCCCCTGACTTT 59.957 50.000 0.00 0.00 0.00 2.66
7520 14576 1.641192 GGATTCCTTTCCCCCTGACTT 59.359 52.381 0.00 0.00 0.00 3.01
7521 14577 1.299939 GGATTCCTTTCCCCCTGACT 58.700 55.000 0.00 0.00 0.00 3.41
7522 14578 3.905331 GGATTCCTTTCCCCCTGAC 57.095 57.895 0.00 0.00 0.00 3.51
7529 14585 4.407365 TCAGAAGTTTGGGATTCCTTTCC 58.593 43.478 2.01 0.00 34.83 3.13
7530 14586 6.040955 AGTTTCAGAAGTTTGGGATTCCTTTC 59.959 38.462 2.01 0.59 0.00 2.62
7531 14587 5.899547 AGTTTCAGAAGTTTGGGATTCCTTT 59.100 36.000 2.01 0.00 0.00 3.11
7532 14588 5.458595 AGTTTCAGAAGTTTGGGATTCCTT 58.541 37.500 2.01 0.00 0.00 3.36
7533 14589 5.066913 AGTTTCAGAAGTTTGGGATTCCT 57.933 39.130 2.01 0.00 0.00 3.36
7534 14590 5.073428 AGAGTTTCAGAAGTTTGGGATTCC 58.927 41.667 0.00 0.00 0.00 3.01
7535 14591 6.937465 ACTAGAGTTTCAGAAGTTTGGGATTC 59.063 38.462 0.00 0.00 0.00 2.52
7536 14592 6.842676 ACTAGAGTTTCAGAAGTTTGGGATT 58.157 36.000 0.00 0.00 0.00 3.01
7537 14593 6.441088 ACTAGAGTTTCAGAAGTTTGGGAT 57.559 37.500 0.00 0.00 0.00 3.85
7538 14594 5.888982 ACTAGAGTTTCAGAAGTTTGGGA 57.111 39.130 0.00 0.00 0.00 4.37
7539 14595 6.760291 AGTACTAGAGTTTCAGAAGTTTGGG 58.240 40.000 0.00 0.00 0.00 4.12
7540 14596 9.760077 TTTAGTACTAGAGTTTCAGAAGTTTGG 57.240 33.333 2.23 0.00 0.00 3.28
7542 14598 9.478768 GCTTTAGTACTAGAGTTTCAGAAGTTT 57.521 33.333 18.76 0.00 0.00 2.66
7543 14599 8.639761 TGCTTTAGTACTAGAGTTTCAGAAGTT 58.360 33.333 18.76 0.00 0.00 2.66
7544 14600 8.179509 TGCTTTAGTACTAGAGTTTCAGAAGT 57.820 34.615 18.76 0.00 0.00 3.01
7545 14601 9.646427 ATTGCTTTAGTACTAGAGTTTCAGAAG 57.354 33.333 18.76 10.39 0.00 2.85
7546 14602 9.424319 CATTGCTTTAGTACTAGAGTTTCAGAA 57.576 33.333 18.76 1.04 0.00 3.02
7547 14603 8.585881 ACATTGCTTTAGTACTAGAGTTTCAGA 58.414 33.333 18.76 3.37 0.00 3.27
7548 14604 8.764524 ACATTGCTTTAGTACTAGAGTTTCAG 57.235 34.615 18.76 9.95 0.00 3.02
7549 14605 9.555727 AAACATTGCTTTAGTACTAGAGTTTCA 57.444 29.630 18.76 8.25 0.00 2.69
7552 14608 8.290325 GCAAAACATTGCTTTAGTACTAGAGTT 58.710 33.333 18.76 5.93 44.15 3.01
7553 14609 7.807680 GCAAAACATTGCTTTAGTACTAGAGT 58.192 34.615 18.76 0.30 44.15 3.24
7564 14620 8.526486 GCTGATAGCTTAGCAAAACATTGCTTT 61.526 37.037 19.77 7.73 46.11 3.51
7565 14621 7.118299 GCTGATAGCTTAGCAAAACATTGCTT 61.118 38.462 19.77 6.12 46.11 3.91
7567 14623 4.501921 GCTGATAGCTTAGCAAAACATTGC 59.498 41.667 7.07 5.44 42.22 3.56
7582 14638 2.630580 AGCCAACCTAGTAGCTGATAGC 59.369 50.000 0.00 0.00 42.84 2.97
7583 14639 4.262249 GGAAGCCAACCTAGTAGCTGATAG 60.262 50.000 0.00 0.00 35.30 2.08
7584 14640 3.641906 GGAAGCCAACCTAGTAGCTGATA 59.358 47.826 0.00 0.00 35.30 2.15
7585 14641 2.436173 GGAAGCCAACCTAGTAGCTGAT 59.564 50.000 0.00 0.00 35.30 2.90
7586 14642 1.831736 GGAAGCCAACCTAGTAGCTGA 59.168 52.381 0.00 0.00 35.30 4.26
7587 14643 1.134371 GGGAAGCCAACCTAGTAGCTG 60.134 57.143 0.00 0.00 35.30 4.24
7588 14644 1.205055 GGGAAGCCAACCTAGTAGCT 58.795 55.000 0.00 0.00 37.10 3.32
7589 14645 1.205055 AGGGAAGCCAACCTAGTAGC 58.795 55.000 0.00 0.00 34.71 3.58
7590 14646 3.371965 TGTAGGGAAGCCAACCTAGTAG 58.628 50.000 0.00 0.00 39.88 2.57
7591 14647 3.371965 CTGTAGGGAAGCCAACCTAGTA 58.628 50.000 0.00 0.00 39.88 1.82
7592 14648 2.188817 CTGTAGGGAAGCCAACCTAGT 58.811 52.381 0.00 0.00 39.88 2.57
7593 14649 1.134371 GCTGTAGGGAAGCCAACCTAG 60.134 57.143 0.00 0.00 39.88 3.02
7594 14650 0.909623 GCTGTAGGGAAGCCAACCTA 59.090 55.000 0.00 0.00 38.30 3.08
7595 14651 1.133809 TGCTGTAGGGAAGCCAACCT 61.134 55.000 0.00 0.00 40.06 3.50
7596 14652 0.251165 TTGCTGTAGGGAAGCCAACC 60.251 55.000 0.00 0.00 40.06 3.77
7597 14653 1.474077 CATTGCTGTAGGGAAGCCAAC 59.526 52.381 0.00 0.00 40.06 3.77
7598 14654 1.616725 CCATTGCTGTAGGGAAGCCAA 60.617 52.381 0.00 0.00 40.06 4.52
7599 14655 0.034186 CCATTGCTGTAGGGAAGCCA 60.034 55.000 0.00 0.00 40.06 4.75
7600 14656 0.255890 TCCATTGCTGTAGGGAAGCC 59.744 55.000 0.00 0.00 40.06 4.35
7601 14657 1.383523 GTCCATTGCTGTAGGGAAGC 58.616 55.000 0.00 0.00 41.22 3.86
7602 14658 1.207089 TCGTCCATTGCTGTAGGGAAG 59.793 52.381 0.00 0.00 0.00 3.46
7603 14659 1.271856 TCGTCCATTGCTGTAGGGAA 58.728 50.000 0.00 0.00 0.00 3.97
7604 14660 1.271856 TTCGTCCATTGCTGTAGGGA 58.728 50.000 0.00 0.00 0.00 4.20
7605 14661 1.737793 GTTTCGTCCATTGCTGTAGGG 59.262 52.381 0.00 0.00 0.00 3.53
7606 14662 2.699954 AGTTTCGTCCATTGCTGTAGG 58.300 47.619 0.00 0.00 0.00 3.18
7607 14663 4.688879 TGTTAGTTTCGTCCATTGCTGTAG 59.311 41.667 0.00 0.00 0.00 2.74
7608 14664 4.633175 TGTTAGTTTCGTCCATTGCTGTA 58.367 39.130 0.00 0.00 0.00 2.74
7609 14665 3.472652 TGTTAGTTTCGTCCATTGCTGT 58.527 40.909 0.00 0.00 0.00 4.40
7610 14666 3.745975 TCTGTTAGTTTCGTCCATTGCTG 59.254 43.478 0.00 0.00 0.00 4.41
7611 14667 4.002906 TCTGTTAGTTTCGTCCATTGCT 57.997 40.909 0.00 0.00 0.00 3.91
7612 14668 4.391830 TCATCTGTTAGTTTCGTCCATTGC 59.608 41.667 0.00 0.00 0.00 3.56
7613 14669 6.480524 TTCATCTGTTAGTTTCGTCCATTG 57.519 37.500 0.00 0.00 0.00 2.82
7614 14670 7.228706 AGTTTTCATCTGTTAGTTTCGTCCATT 59.771 33.333 0.00 0.00 0.00 3.16
7615 14671 6.710744 AGTTTTCATCTGTTAGTTTCGTCCAT 59.289 34.615 0.00 0.00 0.00 3.41
7616 14672 6.053005 AGTTTTCATCTGTTAGTTTCGTCCA 58.947 36.000 0.00 0.00 0.00 4.02
7617 14673 6.347483 GGAGTTTTCATCTGTTAGTTTCGTCC 60.347 42.308 0.00 0.00 0.00 4.79
7618 14674 6.202188 TGGAGTTTTCATCTGTTAGTTTCGTC 59.798 38.462 0.00 0.00 0.00 4.20
7619 14675 6.053005 TGGAGTTTTCATCTGTTAGTTTCGT 58.947 36.000 0.00 0.00 0.00 3.85
7620 14676 6.539649 TGGAGTTTTCATCTGTTAGTTTCG 57.460 37.500 0.00 0.00 0.00 3.46
7621 14677 8.178313 GCTATGGAGTTTTCATCTGTTAGTTTC 58.822 37.037 0.00 0.00 0.00 2.78
7622 14678 7.121315 GGCTATGGAGTTTTCATCTGTTAGTTT 59.879 37.037 0.00 0.00 0.00 2.66
7623 14679 6.599638 GGCTATGGAGTTTTCATCTGTTAGTT 59.400 38.462 0.00 0.00 0.00 2.24
7624 14680 6.116126 GGCTATGGAGTTTTCATCTGTTAGT 58.884 40.000 0.00 0.00 0.00 2.24
7625 14681 6.115446 TGGCTATGGAGTTTTCATCTGTTAG 58.885 40.000 0.00 0.00 0.00 2.34
7626 14682 6.061022 TGGCTATGGAGTTTTCATCTGTTA 57.939 37.500 0.00 0.00 0.00 2.41
7627 14683 4.922206 TGGCTATGGAGTTTTCATCTGTT 58.078 39.130 0.00 0.00 0.00 3.16
7628 14684 4.574674 TGGCTATGGAGTTTTCATCTGT 57.425 40.909 0.00 0.00 0.00 3.41
7629 14685 5.188434 TCTTGGCTATGGAGTTTTCATCTG 58.812 41.667 0.00 0.00 0.00 2.90
7630 14686 5.441718 TCTTGGCTATGGAGTTTTCATCT 57.558 39.130 0.00 0.00 0.00 2.90
7631 14687 6.096001 ACAATCTTGGCTATGGAGTTTTCATC 59.904 38.462 0.00 0.00 0.00 2.92
7632 14688 5.954150 ACAATCTTGGCTATGGAGTTTTCAT 59.046 36.000 0.00 0.00 0.00 2.57
7633 14689 5.324409 ACAATCTTGGCTATGGAGTTTTCA 58.676 37.500 0.00 0.00 0.00 2.69
7634 14690 5.904362 ACAATCTTGGCTATGGAGTTTTC 57.096 39.130 0.00 0.00 0.00 2.29
7635 14691 5.567423 GCAACAATCTTGGCTATGGAGTTTT 60.567 40.000 0.00 0.00 0.00 2.43
7636 14692 4.082026 GCAACAATCTTGGCTATGGAGTTT 60.082 41.667 0.00 0.00 0.00 2.66
7637 14693 3.445096 GCAACAATCTTGGCTATGGAGTT 59.555 43.478 0.00 0.00 0.00 3.01
7638 14694 3.019564 GCAACAATCTTGGCTATGGAGT 58.980 45.455 0.00 0.00 0.00 3.85
7639 14695 3.285484 AGCAACAATCTTGGCTATGGAG 58.715 45.455 0.00 0.00 34.25 3.86
7640 14696 3.370840 AGCAACAATCTTGGCTATGGA 57.629 42.857 0.00 0.00 34.25 3.41
7641 14697 3.488047 CGAAGCAACAATCTTGGCTATGG 60.488 47.826 0.00 0.00 35.11 2.74
7642 14698 3.488047 CCGAAGCAACAATCTTGGCTATG 60.488 47.826 0.00 0.00 35.11 2.23
7643 14699 2.684881 CCGAAGCAACAATCTTGGCTAT 59.315 45.455 0.00 0.00 35.11 2.97
7644 14700 2.083774 CCGAAGCAACAATCTTGGCTA 58.916 47.619 0.00 0.00 35.11 3.93
7645 14701 0.883833 CCGAAGCAACAATCTTGGCT 59.116 50.000 0.00 0.00 38.45 4.75
7646 14702 0.598065 ACCGAAGCAACAATCTTGGC 59.402 50.000 0.00 0.00 0.00 4.52
7647 14703 4.701956 ATAACCGAAGCAACAATCTTGG 57.298 40.909 0.00 0.00 0.00 3.61
7648 14704 6.742718 CAGTTATAACCGAAGCAACAATCTTG 59.257 38.462 12.05 0.00 0.00 3.02
7649 14705 6.622896 GCAGTTATAACCGAAGCAACAATCTT 60.623 38.462 12.05 0.00 0.00 2.40
7650 14706 5.163754 GCAGTTATAACCGAAGCAACAATCT 60.164 40.000 12.05 0.00 0.00 2.40
7651 14707 5.028375 GCAGTTATAACCGAAGCAACAATC 58.972 41.667 12.05 0.00 0.00 2.67
7652 14708 4.457603 TGCAGTTATAACCGAAGCAACAAT 59.542 37.500 12.05 0.00 0.00 2.71
7653 14709 3.815962 TGCAGTTATAACCGAAGCAACAA 59.184 39.130 12.05 0.00 0.00 2.83
7654 14710 3.403968 TGCAGTTATAACCGAAGCAACA 58.596 40.909 12.05 0.00 0.00 3.33
7655 14711 3.727970 GCTGCAGTTATAACCGAAGCAAC 60.728 47.826 22.14 14.11 31.81 4.17
7656 14712 2.418628 GCTGCAGTTATAACCGAAGCAA 59.581 45.455 22.14 8.48 31.81 3.91
7657 14713 2.006888 GCTGCAGTTATAACCGAAGCA 58.993 47.619 22.14 19.11 31.81 3.91
7658 14714 2.006888 TGCTGCAGTTATAACCGAAGC 58.993 47.619 20.81 20.81 0.00 3.86
7659 14715 3.871006 TGATGCTGCAGTTATAACCGAAG 59.129 43.478 16.64 7.21 0.00 3.79
7660 14716 3.621268 GTGATGCTGCAGTTATAACCGAA 59.379 43.478 16.64 0.00 0.00 4.30
7661 14717 3.194861 GTGATGCTGCAGTTATAACCGA 58.805 45.455 16.64 0.00 0.00 4.69
7662 14718 2.287915 GGTGATGCTGCAGTTATAACCG 59.712 50.000 16.64 3.11 0.00 4.44
7663 14719 2.287915 CGGTGATGCTGCAGTTATAACC 59.712 50.000 21.16 21.16 0.00 2.85
7664 14720 3.592381 CGGTGATGCTGCAGTTATAAC 57.408 47.619 16.64 12.90 0.00 1.89
7674 14730 0.535780 ATACATGGGCGGTGATGCTG 60.536 55.000 0.00 0.00 34.52 4.41
7675 14731 0.535780 CATACATGGGCGGTGATGCT 60.536 55.000 0.00 0.00 34.52 3.79
7676 14732 1.951510 CATACATGGGCGGTGATGC 59.048 57.895 0.00 0.00 0.00 3.91
7677 14733 1.518056 GGCATACATGGGCGGTGATG 61.518 60.000 0.00 0.00 0.00 3.07
7678 14734 1.228245 GGCATACATGGGCGGTGAT 60.228 57.895 0.00 0.00 0.00 3.06
7679 14735 2.191908 GGCATACATGGGCGGTGA 59.808 61.111 0.00 0.00 0.00 4.02
7680 14736 1.893808 GAGGCATACATGGGCGGTG 60.894 63.158 0.00 0.00 35.71 4.94
7681 14737 2.072487 AGAGGCATACATGGGCGGT 61.072 57.895 0.00 0.00 35.71 5.68
7682 14738 1.598962 CAGAGGCATACATGGGCGG 60.599 63.158 0.00 0.00 35.71 6.13
7683 14739 1.598962 CCAGAGGCATACATGGGCG 60.599 63.158 0.00 0.00 35.71 6.13
7684 14740 1.228367 CCCAGAGGCATACATGGGC 60.228 63.158 3.14 0.00 45.62 5.36
7686 14742 2.026641 CAAACCCAGAGGCATACATGG 58.973 52.381 0.00 0.00 36.11 3.66
7687 14743 3.003394 TCAAACCCAGAGGCATACATG 57.997 47.619 0.00 0.00 36.11 3.21
7688 14744 3.624777 CTTCAAACCCAGAGGCATACAT 58.375 45.455 0.00 0.00 36.11 2.29
7689 14745 2.879756 GCTTCAAACCCAGAGGCATACA 60.880 50.000 0.00 0.00 37.93 2.29
7690 14746 1.745653 GCTTCAAACCCAGAGGCATAC 59.254 52.381 0.00 0.00 37.93 2.39
7691 14747 1.340991 GGCTTCAAACCCAGAGGCATA 60.341 52.381 0.00 0.00 39.57 3.14
7692 14748 0.613012 GGCTTCAAACCCAGAGGCAT 60.613 55.000 0.00 0.00 39.57 4.40
7693 14749 1.228552 GGCTTCAAACCCAGAGGCA 60.229 57.895 0.00 0.00 39.57 4.75
7694 14750 2.335712 CGGCTTCAAACCCAGAGGC 61.336 63.158 0.00 0.00 37.37 4.70
7695 14751 2.335712 GCGGCTTCAAACCCAGAGG 61.336 63.158 0.00 0.00 40.04 3.69
7696 14752 2.335712 GGCGGCTTCAAACCCAGAG 61.336 63.158 0.00 0.00 0.00 3.35
7697 14753 2.282180 GGCGGCTTCAAACCCAGA 60.282 61.111 0.00 0.00 0.00 3.86
7698 14754 2.282462 AGGCGGCTTCAAACCCAG 60.282 61.111 5.25 0.00 0.00 4.45
7699 14755 2.282180 GAGGCGGCTTCAAACCCA 60.282 61.111 14.76 0.00 0.00 4.51
7700 14756 1.866853 CTTGAGGCGGCTTCAAACCC 61.867 60.000 24.74 0.00 34.41 4.11
7701 14757 0.889186 TCTTGAGGCGGCTTCAAACC 60.889 55.000 24.74 0.00 34.41 3.27
7702 14758 0.519077 CTCTTGAGGCGGCTTCAAAC 59.481 55.000 24.74 0.00 34.41 2.93
7703 14759 1.237285 GCTCTTGAGGCGGCTTCAAA 61.237 55.000 24.74 15.77 34.41 2.69
7704 14760 1.672356 GCTCTTGAGGCGGCTTCAA 60.672 57.895 23.55 23.55 33.76 2.69
7705 14761 2.046892 GCTCTTGAGGCGGCTTCA 60.047 61.111 14.76 11.05 0.00 3.02
7706 14762 1.028868 AATGCTCTTGAGGCGGCTTC 61.029 55.000 14.76 4.99 0.00 3.86
7707 14763 1.001641 AATGCTCTTGAGGCGGCTT 60.002 52.632 14.76 0.00 0.00 4.35
7708 14764 1.451028 GAATGCTCTTGAGGCGGCT 60.451 57.895 13.09 13.09 0.00 5.52
7709 14765 1.712977 CTGAATGCTCTTGAGGCGGC 61.713 60.000 0.00 0.00 0.00 6.53
7710 14766 1.094073 CCTGAATGCTCTTGAGGCGG 61.094 60.000 0.00 0.00 0.00 6.13
7711 14767 1.712977 GCCTGAATGCTCTTGAGGCG 61.713 60.000 12.59 0.00 39.91 5.52
7712 14768 2.105124 GCCTGAATGCTCTTGAGGC 58.895 57.895 12.59 12.59 42.37 4.70
7713 14769 2.996249 TAGCCTGAATGCTCTTGAGG 57.004 50.000 0.00 1.70 41.68 3.86
7714 14770 3.058450 CGATAGCCTGAATGCTCTTGAG 58.942 50.000 0.00 0.00 41.68 3.02
7715 14771 2.224137 CCGATAGCCTGAATGCTCTTGA 60.224 50.000 0.00 0.00 41.68 3.02
7716 14772 2.141517 CCGATAGCCTGAATGCTCTTG 58.858 52.381 0.00 0.00 41.68 3.02
7717 14773 2.042464 TCCGATAGCCTGAATGCTCTT 58.958 47.619 0.00 0.00 41.68 2.85
7718 14774 1.709578 TCCGATAGCCTGAATGCTCT 58.290 50.000 0.00 0.00 41.68 4.09
7719 14775 2.758736 ATCCGATAGCCTGAATGCTC 57.241 50.000 0.00 0.00 41.68 4.26
7720 14776 2.369860 TGAATCCGATAGCCTGAATGCT 59.630 45.455 0.00 0.00 45.38 3.79
7721 14777 2.771089 TGAATCCGATAGCCTGAATGC 58.229 47.619 0.00 0.00 0.00 3.56
7722 14778 6.427853 TGTTATTGAATCCGATAGCCTGAATG 59.572 38.462 0.00 0.00 0.00 2.67
7723 14779 6.533730 TGTTATTGAATCCGATAGCCTGAAT 58.466 36.000 0.00 0.00 0.00 2.57
7724 14780 5.924356 TGTTATTGAATCCGATAGCCTGAA 58.076 37.500 0.00 0.00 0.00 3.02
7725 14781 5.545063 TGTTATTGAATCCGATAGCCTGA 57.455 39.130 0.00 0.00 0.00 3.86
7726 14782 6.808008 ATTGTTATTGAATCCGATAGCCTG 57.192 37.500 0.00 0.00 0.00 4.85
7727 14783 7.823745 AAATTGTTATTGAATCCGATAGCCT 57.176 32.000 0.00 0.00 0.00 4.58
7728 14784 7.382218 CCAAAATTGTTATTGAATCCGATAGCC 59.618 37.037 0.00 0.00 0.00 3.93
7729 14785 7.920682 ACCAAAATTGTTATTGAATCCGATAGC 59.079 33.333 0.00 0.00 0.00 2.97
7730 14786 9.236691 CACCAAAATTGTTATTGAATCCGATAG 57.763 33.333 0.00 0.00 0.00 2.08
7731 14787 7.704472 GCACCAAAATTGTTATTGAATCCGATA 59.296 33.333 0.00 0.00 0.00 2.92
7732 14788 6.534793 GCACCAAAATTGTTATTGAATCCGAT 59.465 34.615 0.00 0.00 0.00 4.18
7733 14789 5.866633 GCACCAAAATTGTTATTGAATCCGA 59.133 36.000 0.00 0.00 0.00 4.55
7734 14790 5.636965 TGCACCAAAATTGTTATTGAATCCG 59.363 36.000 0.00 0.00 0.00 4.18
7735 14791 7.201635 GGATGCACCAAAATTGTTATTGAATCC 60.202 37.037 0.00 0.00 38.79 3.01
7736 14792 7.333921 TGGATGCACCAAAATTGTTATTGAATC 59.666 33.333 5.65 0.00 46.75 2.52
7737 14793 7.166851 TGGATGCACCAAAATTGTTATTGAAT 58.833 30.769 5.65 0.00 46.75 2.57
7738 14794 6.528321 TGGATGCACCAAAATTGTTATTGAA 58.472 32.000 5.65 0.00 46.75 2.69
7739 14795 6.106648 TGGATGCACCAAAATTGTTATTGA 57.893 33.333 5.65 0.00 46.75 2.57
7753 14809 0.447801 CTGCTAACGTTGGATGCACC 59.552 55.000 16.60 0.00 39.54 5.01
7754 14810 0.179189 GCTGCTAACGTTGGATGCAC 60.179 55.000 16.60 9.15 0.00 4.57
7755 14811 0.605050 TGCTGCTAACGTTGGATGCA 60.605 50.000 21.14 21.14 0.00 3.96
7756 14812 0.521291 TTGCTGCTAACGTTGGATGC 59.479 50.000 16.60 17.16 0.00 3.91
7757 14813 2.076100 TCTTGCTGCTAACGTTGGATG 58.924 47.619 16.60 7.81 0.00 3.51
7758 14814 2.472695 TCTTGCTGCTAACGTTGGAT 57.527 45.000 16.60 0.00 0.00 3.41
7759 14815 2.248280 TTCTTGCTGCTAACGTTGGA 57.752 45.000 16.60 3.91 0.00 3.53
7760 14816 4.154195 ACTTATTCTTGCTGCTAACGTTGG 59.846 41.667 11.99 9.60 0.00 3.77
7761 14817 5.283060 ACTTATTCTTGCTGCTAACGTTG 57.717 39.130 11.99 2.07 0.00 4.10
7762 14818 4.392138 GGACTTATTCTTGCTGCTAACGTT 59.608 41.667 5.88 5.88 0.00 3.99
7763 14819 3.933332 GGACTTATTCTTGCTGCTAACGT 59.067 43.478 0.00 0.00 0.00 3.99
7764 14820 3.932710 TGGACTTATTCTTGCTGCTAACG 59.067 43.478 0.00 0.00 0.00 3.18
7765 14821 5.880054 TTGGACTTATTCTTGCTGCTAAC 57.120 39.130 0.00 0.00 0.00 2.34
7766 14822 5.183140 GGTTTGGACTTATTCTTGCTGCTAA 59.817 40.000 0.00 0.00 0.00 3.09
7767 14823 4.700213 GGTTTGGACTTATTCTTGCTGCTA 59.300 41.667 0.00 0.00 0.00 3.49
7768 14824 3.507622 GGTTTGGACTTATTCTTGCTGCT 59.492 43.478 0.00 0.00 0.00 4.24
7769 14825 3.507622 AGGTTTGGACTTATTCTTGCTGC 59.492 43.478 0.00 0.00 0.00 5.25
7770 14826 4.761739 TCAGGTTTGGACTTATTCTTGCTG 59.238 41.667 0.00 0.00 0.00 4.41
7771 14827 4.985538 TCAGGTTTGGACTTATTCTTGCT 58.014 39.130 0.00 0.00 0.00 3.91
7772 14828 5.904362 ATCAGGTTTGGACTTATTCTTGC 57.096 39.130 0.00 0.00 0.00 4.01
7773 14829 6.095377 GCAATCAGGTTTGGACTTATTCTTG 58.905 40.000 0.00 0.00 0.00 3.02
7774 14830 5.774690 TGCAATCAGGTTTGGACTTATTCTT 59.225 36.000 0.00 0.00 0.00 2.52
7775 14831 5.324409 TGCAATCAGGTTTGGACTTATTCT 58.676 37.500 0.00 0.00 0.00 2.40
7776 14832 5.643379 TGCAATCAGGTTTGGACTTATTC 57.357 39.130 0.00 0.00 0.00 1.75
7777 14833 7.902920 ATATGCAATCAGGTTTGGACTTATT 57.097 32.000 0.00 0.00 29.29 1.40
7778 14834 9.592196 AATATATGCAATCAGGTTTGGACTTAT 57.408 29.630 0.00 0.00 29.29 1.73
7779 14835 8.995027 AATATATGCAATCAGGTTTGGACTTA 57.005 30.769 0.00 0.00 29.29 2.24
7780 14836 7.902920 AATATATGCAATCAGGTTTGGACTT 57.097 32.000 0.00 0.00 29.29 3.01
7781 14837 7.781693 AGAAATATATGCAATCAGGTTTGGACT 59.218 33.333 0.00 0.00 29.29 3.85
7782 14838 7.864379 CAGAAATATATGCAATCAGGTTTGGAC 59.136 37.037 0.00 0.00 29.29 4.02
7783 14839 7.470424 GCAGAAATATATGCAATCAGGTTTGGA 60.470 37.037 0.00 0.00 43.27 3.53
7784 14840 6.643770 GCAGAAATATATGCAATCAGGTTTGG 59.356 38.462 0.00 0.00 43.27 3.28
7785 14841 6.361481 CGCAGAAATATATGCAATCAGGTTTG 59.639 38.462 0.00 0.00 43.99 2.93
7786 14842 6.441274 CGCAGAAATATATGCAATCAGGTTT 58.559 36.000 0.00 0.00 43.99 3.27
7787 14843 5.048504 CCGCAGAAATATATGCAATCAGGTT 60.049 40.000 0.00 0.00 43.99 3.50
7788 14844 4.456911 CCGCAGAAATATATGCAATCAGGT 59.543 41.667 0.00 0.00 43.99 4.00
7789 14845 4.696877 TCCGCAGAAATATATGCAATCAGG 59.303 41.667 0.00 1.95 43.99 3.86
7790 14846 5.868043 TCCGCAGAAATATATGCAATCAG 57.132 39.130 0.00 0.00 43.99 2.90
7791 14847 6.822667 ATTCCGCAGAAATATATGCAATCA 57.177 33.333 0.00 0.00 43.99 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.