Multiple sequence alignment - TraesCS6D01G128100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G128100 chr6D 100.000 8205 0 0 1 8205 91857836 91849632 0.000000e+00 15152.0
1 TraesCS6D01G128100 chr6D 97.917 96 2 0 7378 7473 91850364 91850459 5.090000e-37 167.0
2 TraesCS6D01G128100 chr6D 100.000 36 0 0 6189 6224 292381971 292381936 5.310000e-07 67.6
3 TraesCS6D01G128100 chr6D 100.000 28 0 0 1 28 289032155 289032182 1.500000e-02 52.8
4 TraesCS6D01G128100 chr6B 94.819 4439 130 25 809 5198 176401331 176396944 0.000000e+00 6831.0
5 TraesCS6D01G128100 chr6B 89.503 1067 76 20 6251 7290 176395841 176394784 0.000000e+00 1317.0
6 TraesCS6D01G128100 chr6B 91.271 779 62 4 7427 8204 437481394 437482167 0.000000e+00 1057.0
7 TraesCS6D01G128100 chr6B 91.721 761 39 13 5194 5949 176396913 176396172 0.000000e+00 1035.0
8 TraesCS6D01G128100 chr6B 89.304 776 77 4 7427 8199 547004951 547005723 0.000000e+00 968.0
9 TraesCS6D01G128100 chr6B 94.393 214 9 3 6027 6240 176396175 176395965 7.940000e-85 326.0
10 TraesCS6D01G128100 chr6B 87.730 163 15 4 91 251 622017120 622016961 1.410000e-42 185.0
11 TraesCS6D01G128100 chr6B 87.117 163 16 4 91 251 621580054 621580213 6.540000e-41 180.0
12 TraesCS6D01G128100 chr6B 87.500 88 2 2 7275 7353 176394764 176394677 8.770000e-15 93.5
13 TraesCS6D01G128100 chr6B 98.000 50 1 0 7378 7427 547004997 547004948 4.080000e-13 87.9
14 TraesCS6D01G128100 chr6B 100.000 30 0 0 7345 7374 176394678 176394707 1.000000e-03 56.5
15 TraesCS6D01G128100 chr6A 96.007 1177 32 10 807 1976 111746139 111744971 0.000000e+00 1899.0
16 TraesCS6D01G128100 chr6A 97.996 998 18 2 4083 5079 111743716 111742720 0.000000e+00 1731.0
17 TraesCS6D01G128100 chr6A 92.066 1147 53 17 6239 7353 111741255 111740115 0.000000e+00 1580.0
18 TraesCS6D01G128100 chr6A 93.709 763 33 8 5194 5949 111742336 111741582 0.000000e+00 1129.0
19 TraesCS6D01G128100 chr6A 94.937 632 29 3 3361 3991 111744364 111743735 0.000000e+00 987.0
20 TraesCS6D01G128100 chr6A 95.238 420 10 2 2900 3310 111744776 111744358 0.000000e+00 656.0
21 TraesCS6D01G128100 chr6A 95.755 212 8 1 6029 6240 111741581 111741371 2.840000e-89 340.0
22 TraesCS6D01G128100 chr6A 87.805 82 9 1 5117 5198 111742489 111742409 2.440000e-15 95.3
23 TraesCS6D01G128100 chr6A 97.297 37 0 1 4036 4072 111743736 111743701 2.470000e-05 62.1
24 TraesCS6D01G128100 chr6A 100.000 30 0 0 7345 7374 111740116 111740145 1.000000e-03 56.5
25 TraesCS6D01G128100 chr3D 95.868 726 19 8 78 801 96673534 96674250 0.000000e+00 1164.0
26 TraesCS6D01G128100 chr3D 91.071 56 1 3 260 312 529775048 529775102 1.140000e-08 73.1
27 TraesCS6D01G128100 chr7B 90.116 779 72 3 7427 8204 690565541 690566315 0.000000e+00 1007.0
28 TraesCS6D01G128100 chr7B 90.103 778 72 3 7427 8203 690596236 690597009 0.000000e+00 1005.0
29 TraesCS6D01G128100 chr7B 97.222 36 1 0 6189 6224 162094959 162094994 2.470000e-05 62.1
30 TraesCS6D01G128100 chr7B 97.222 36 1 0 6189 6224 187783664 187783629 2.470000e-05 62.1
31 TraesCS6D01G128100 chr7B 96.774 31 1 0 1 31 581388258 581388228 1.500000e-02 52.8
32 TraesCS6D01G128100 chr4A 90.051 784 67 6 7427 8205 659019159 659018382 0.000000e+00 1005.0
33 TraesCS6D01G128100 chr4A 98.000 50 1 0 7378 7427 659019113 659019162 4.080000e-13 87.9
34 TraesCS6D01G128100 chr4B 89.898 782 73 4 7427 8205 660663876 660663098 0.000000e+00 1002.0
35 TraesCS6D01G128100 chr4B 98.000 50 1 0 7378 7427 660663830 660663879 4.080000e-13 87.9
36 TraesCS6D01G128100 chr4B 96.000 50 2 0 7378 7427 74674279 74674328 1.900000e-11 82.4
37 TraesCS6D01G128100 chr4B 96.774 31 1 0 1 31 667980203 667980173 1.500000e-02 52.8
38 TraesCS6D01G128100 chr3B 89.655 783 74 5 7427 8205 23785363 23784584 0.000000e+00 990.0
39 TraesCS6D01G128100 chr3B 85.227 176 20 6 78 251 703334490 703334319 8.460000e-40 176.0
40 TraesCS6D01G128100 chr3B 85.542 166 22 2 94 258 323357433 323357597 1.090000e-38 172.0
41 TraesCS6D01G128100 chr3B 88.073 109 10 1 340 448 742143332 742143437 8.650000e-25 126.0
42 TraesCS6D01G128100 chr3B 98.000 50 1 0 7378 7427 23785317 23785366 4.080000e-13 87.9
43 TraesCS6D01G128100 chr1B 89.677 775 74 4 7427 8199 146771815 146771045 0.000000e+00 983.0
44 TraesCS6D01G128100 chr1B 89.130 782 79 4 7427 8205 408618215 408617437 0.000000e+00 968.0
45 TraesCS6D01G128100 chr1B 98.000 50 1 0 7378 7427 408618169 408618218 4.080000e-13 87.9
46 TraesCS6D01G128100 chr1B 98.000 50 1 0 7378 7427 548533557 548533508 4.080000e-13 87.9
47 TraesCS6D01G128100 chr2D 86.420 729 63 14 93 794 100781244 100781963 0.000000e+00 765.0
48 TraesCS6D01G128100 chr2D 84.295 312 41 7 501 806 485088118 485087809 1.730000e-76 298.0
49 TraesCS6D01G128100 chr2D 82.677 127 15 2 326 448 488992001 488991878 1.130000e-18 106.0
50 TraesCS6D01G128100 chr2D 87.356 87 8 3 5948 6031 5729556 5729470 6.780000e-16 97.1
51 TraesCS6D01G128100 chr7D 97.052 407 12 0 88 494 180841960 180841554 0.000000e+00 686.0
52 TraesCS6D01G128100 chr7D 94.190 327 15 2 486 808 180831782 180831456 5.720000e-136 496.0
53 TraesCS6D01G128100 chr7D 96.000 50 2 0 7378 7427 7196896 7196847 1.900000e-11 82.4
54 TraesCS6D01G128100 chr7D 100.000 28 0 0 1 28 514073669 514073696 1.500000e-02 52.8
55 TraesCS6D01G128100 chr7D 96.774 31 1 0 1 31 613633040 613633010 1.500000e-02 52.8
56 TraesCS6D01G128100 chr5B 85.993 307 38 5 501 805 442752813 442752510 2.860000e-84 324.0
57 TraesCS6D01G128100 chr5B 89.441 161 16 1 93 253 267667031 267667190 1.400000e-47 202.0
58 TraesCS6D01G128100 chr5B 86.765 68 7 2 5948 6014 563934845 563934911 3.180000e-09 75.0
59 TraesCS6D01G128100 chr5B 88.889 54 5 1 5948 6000 563782648 563782701 1.910000e-06 65.8
60 TraesCS6D01G128100 chrUn 85.948 306 38 5 501 804 359826813 359826511 1.030000e-83 322.0
61 TraesCS6D01G128100 chrUn 86.139 303 37 5 501 801 376512630 376512929 1.030000e-83 322.0
62 TraesCS6D01G128100 chrUn 87.356 87 9 2 5947 6031 82713320 82713406 1.880000e-16 99.0
63 TraesCS6D01G128100 chrUn 100.000 28 0 0 1 28 29719250 29719277 1.500000e-02 52.8
64 TraesCS6D01G128100 chr5D 84.227 317 46 4 488 801 224874370 224874055 1.030000e-78 305.0
65 TraesCS6D01G128100 chr5D 87.879 165 17 3 88 251 423353685 423353523 3.020000e-44 191.0
66 TraesCS6D01G128100 chr5D 92.593 54 2 2 260 312 423353374 423353322 8.830000e-10 76.8
67 TraesCS6D01G128100 chr4D 82.286 350 53 7 464 808 205899686 205899341 2.240000e-75 294.0
68 TraesCS6D01G128100 chr4D 87.195 164 18 3 89 251 268082156 268081995 5.060000e-42 183.0
69 TraesCS6D01G128100 chr5A 84.252 127 13 2 326 448 3389361 3389238 5.200000e-22 117.0
70 TraesCS6D01G128100 chr5A 100.000 28 0 0 1 28 706151656 706151683 1.500000e-02 52.8
71 TraesCS6D01G128100 chr1D 90.698 86 6 2 5947 6030 303314693 303314778 6.730000e-21 113.0
72 TraesCS6D01G128100 chr1D 88.235 85 6 2 5948 6028 238320717 238320633 1.880000e-16 99.0
73 TraesCS6D01G128100 chr2A 82.677 127 15 3 326 448 622864218 622864341 1.130000e-18 106.0
74 TraesCS6D01G128100 chr7A 87.356 87 9 2 5947 6031 171555377 171555463 1.880000e-16 99.0
75 TraesCS6D01G128100 chr7A 97.297 37 0 1 6189 6225 225616912 225616947 2.470000e-05 62.1
76 TraesCS6D01G128100 chr1A 87.209 86 9 2 5947 6030 380947074 380947159 6.780000e-16 97.1
77 TraesCS6D01G128100 chr1A 100.000 28 0 0 1 28 550900854 550900881 1.500000e-02 52.8
78 TraesCS6D01G128100 chr3A 87.342 79 9 1 5948 6025 112940985 112940907 1.130000e-13 89.8
79 TraesCS6D01G128100 chr3A 100.000 36 0 0 6189 6224 648729071 648729106 5.310000e-07 67.6
80 TraesCS6D01G128100 chr2B 100.000 28 0 0 1 28 682223632 682223659 1.500000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G128100 chr6D 91849632 91857836 8204 True 15152.000000 15152 100.000000 1 8205 1 chr6D.!!$R1 8204
1 TraesCS6D01G128100 chr6B 176394677 176401331 6654 True 1920.500000 6831 91.587200 809 7353 5 chr6B.!!$R3 6544
2 TraesCS6D01G128100 chr6B 437481394 437482167 773 False 1057.000000 1057 91.271000 7427 8204 1 chr6B.!!$F2 777
3 TraesCS6D01G128100 chr6B 547004951 547005723 772 False 968.000000 968 89.304000 7427 8199 1 chr6B.!!$F3 772
4 TraesCS6D01G128100 chr6A 111740115 111746139 6024 True 942.155556 1899 94.534444 807 7353 9 chr6A.!!$R1 6546
5 TraesCS6D01G128100 chr3D 96673534 96674250 716 False 1164.000000 1164 95.868000 78 801 1 chr3D.!!$F1 723
6 TraesCS6D01G128100 chr7B 690565541 690566315 774 False 1007.000000 1007 90.116000 7427 8204 1 chr7B.!!$F2 777
7 TraesCS6D01G128100 chr7B 690596236 690597009 773 False 1005.000000 1005 90.103000 7427 8203 1 chr7B.!!$F3 776
8 TraesCS6D01G128100 chr4A 659018382 659019159 777 True 1005.000000 1005 90.051000 7427 8205 1 chr4A.!!$R1 778
9 TraesCS6D01G128100 chr4B 660663098 660663876 778 True 1002.000000 1002 89.898000 7427 8205 1 chr4B.!!$R1 778
10 TraesCS6D01G128100 chr3B 23784584 23785363 779 True 990.000000 990 89.655000 7427 8205 1 chr3B.!!$R1 778
11 TraesCS6D01G128100 chr1B 146771045 146771815 770 True 983.000000 983 89.677000 7427 8199 1 chr1B.!!$R1 772
12 TraesCS6D01G128100 chr1B 408617437 408618215 778 True 968.000000 968 89.130000 7427 8205 1 chr1B.!!$R2 778
13 TraesCS6D01G128100 chr2D 100781244 100781963 719 False 765.000000 765 86.420000 93 794 1 chr2D.!!$F1 701

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.107410 AATAATCAGGCCAACCGCGA 60.107 50.000 8.23 0.0 42.76 5.87 F
81 82 0.107410 ATAATCAGGCCAACCGCGAA 60.107 50.000 8.23 0.0 42.76 4.70 F
420 441 0.608130 AATCAGTGCACTACTCGCCA 59.392 50.000 21.20 0.0 37.60 5.69 F
2162 2278 0.321298 GTCAGGCGCAGGGAAGTAAA 60.321 55.000 10.83 0.0 0.00 2.01 F
3399 3526 1.349357 AGGTTCAAAGCTGTCTCCCTC 59.651 52.381 0.00 0.0 35.05 4.30 F
5115 5436 1.815003 CAGGAGACACATTTCCAAGCC 59.185 52.381 0.00 0.0 35.88 4.35 F
5319 5728 0.474184 GGTAGCATGCCCCACTATGT 59.526 55.000 15.66 0.0 33.16 2.29 F
6875 7412 0.243907 CAAGACGGCGAAAGAGGAGA 59.756 55.000 16.62 0.0 0.00 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1526 1574 0.252761 CCCATTGGCCCAAATCAACC 59.747 55.000 0.00 0.00 0.00 3.77 R
1632 1680 0.855598 AGGCAGGCATGGTCCAATAT 59.144 50.000 0.00 0.00 0.00 1.28 R
2346 2462 0.747255 TGCATCGAGTAGAGGGAAGC 59.253 55.000 0.00 0.00 0.00 3.86 R
3967 4103 1.702401 TGTTCTACCAATGTCCAGCCA 59.298 47.619 0.00 0.00 0.00 4.75 R
5289 5698 0.460284 CATGCTACCTGACGGGACAC 60.460 60.000 7.51 0.00 38.76 3.67 R
6013 6428 0.423956 TCCTACCCCTCCATCCCAAA 59.576 55.000 0.00 0.00 0.00 3.28 R
7131 7692 0.324943 CTCCTTTTTCCTCGCAGGGA 59.675 55.000 2.86 0.00 35.59 4.20 R
7961 8578 0.388134 CCTTGTACTCCACGGTCGTG 60.388 60.000 15.62 15.62 45.02 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.823989 GGGGTCTTGAGTCATGATTATTGG 59.176 45.833 11.51 0.00 0.00 3.16
24 25 4.823989 GGGTCTTGAGTCATGATTATTGGG 59.176 45.833 11.51 0.00 0.00 4.12
25 26 5.440610 GGTCTTGAGTCATGATTATTGGGT 58.559 41.667 11.51 0.00 0.00 4.51
26 27 5.888161 GGTCTTGAGTCATGATTATTGGGTT 59.112 40.000 11.51 0.00 0.00 4.11
27 28 7.054124 GGTCTTGAGTCATGATTATTGGGTTA 58.946 38.462 11.51 0.00 0.00 2.85
28 29 7.012421 GGTCTTGAGTCATGATTATTGGGTTAC 59.988 40.741 11.51 0.00 0.00 2.50
29 30 6.761242 TCTTGAGTCATGATTATTGGGTTACG 59.239 38.462 0.00 0.00 0.00 3.18
30 31 5.364778 TGAGTCATGATTATTGGGTTACGG 58.635 41.667 0.00 0.00 0.00 4.02
31 32 4.134563 AGTCATGATTATTGGGTTACGGC 58.865 43.478 0.00 0.00 0.00 5.68
32 33 3.059188 GTCATGATTATTGGGTTACGGCG 60.059 47.826 4.80 4.80 0.00 6.46
33 34 2.983907 TGATTATTGGGTTACGGCGA 57.016 45.000 16.62 0.00 0.00 5.54
34 35 3.263489 TGATTATTGGGTTACGGCGAA 57.737 42.857 16.62 0.00 0.00 4.70
35 36 3.811083 TGATTATTGGGTTACGGCGAAT 58.189 40.909 16.62 3.93 0.00 3.34
36 37 3.562141 TGATTATTGGGTTACGGCGAATG 59.438 43.478 16.62 0.00 0.00 2.67
37 38 2.983907 TATTGGGTTACGGCGAATGA 57.016 45.000 16.62 0.00 0.00 2.57
38 39 1.375551 ATTGGGTTACGGCGAATGAC 58.624 50.000 16.62 6.02 0.00 3.06
39 40 0.322322 TTGGGTTACGGCGAATGACT 59.678 50.000 16.62 0.00 0.00 3.41
40 41 0.322322 TGGGTTACGGCGAATGACTT 59.678 50.000 16.62 0.00 0.00 3.01
41 42 1.270947 TGGGTTACGGCGAATGACTTT 60.271 47.619 16.62 0.00 0.00 2.66
42 43 1.808343 GGGTTACGGCGAATGACTTTT 59.192 47.619 16.62 0.00 0.00 2.27
43 44 2.227149 GGGTTACGGCGAATGACTTTTT 59.773 45.455 16.62 0.00 0.00 1.94
44 45 3.485633 GGTTACGGCGAATGACTTTTTC 58.514 45.455 16.62 0.00 0.00 2.29
45 46 3.187842 GGTTACGGCGAATGACTTTTTCT 59.812 43.478 16.62 0.00 0.00 2.52
46 47 4.389687 GGTTACGGCGAATGACTTTTTCTA 59.610 41.667 16.62 0.00 0.00 2.10
47 48 5.064325 GGTTACGGCGAATGACTTTTTCTAT 59.936 40.000 16.62 0.00 0.00 1.98
48 49 6.256321 GGTTACGGCGAATGACTTTTTCTATA 59.744 38.462 16.62 0.00 0.00 1.31
49 50 5.713822 ACGGCGAATGACTTTTTCTATAC 57.286 39.130 16.62 0.00 0.00 1.47
50 51 5.172934 ACGGCGAATGACTTTTTCTATACA 58.827 37.500 16.62 0.00 0.00 2.29
51 52 5.291128 ACGGCGAATGACTTTTTCTATACAG 59.709 40.000 16.62 0.00 0.00 2.74
52 53 5.291128 CGGCGAATGACTTTTTCTATACAGT 59.709 40.000 0.00 0.00 0.00 3.55
53 54 6.474427 CGGCGAATGACTTTTTCTATACAGTA 59.526 38.462 0.00 0.00 0.00 2.74
54 55 7.514747 CGGCGAATGACTTTTTCTATACAGTAC 60.515 40.741 0.00 0.00 0.00 2.73
55 56 7.491696 GGCGAATGACTTTTTCTATACAGTACT 59.508 37.037 0.00 0.00 0.00 2.73
56 57 8.321716 GCGAATGACTTTTTCTATACAGTACTG 58.678 37.037 21.44 21.44 0.00 2.74
57 58 9.569167 CGAATGACTTTTTCTATACAGTACTGA 57.431 33.333 29.30 13.09 0.00 3.41
72 73 6.583562 ACAGTACTGAAGTAATAATCAGGCC 58.416 40.000 29.30 0.00 45.80 5.19
73 74 6.156256 ACAGTACTGAAGTAATAATCAGGCCA 59.844 38.462 29.30 0.00 45.80 5.36
74 75 7.047891 CAGTACTGAAGTAATAATCAGGCCAA 58.952 38.462 18.45 0.00 45.80 4.52
75 76 7.011482 CAGTACTGAAGTAATAATCAGGCCAAC 59.989 40.741 18.45 1.33 45.80 3.77
76 77 5.193679 ACTGAAGTAATAATCAGGCCAACC 58.806 41.667 5.01 0.00 45.80 3.77
77 78 4.196193 TGAAGTAATAATCAGGCCAACCG 58.804 43.478 5.01 0.00 42.76 4.44
78 79 2.572290 AGTAATAATCAGGCCAACCGC 58.428 47.619 5.01 0.00 42.76 5.68
79 80 1.263217 GTAATAATCAGGCCAACCGCG 59.737 52.381 5.01 0.00 42.76 6.46
80 81 0.107410 AATAATCAGGCCAACCGCGA 60.107 50.000 8.23 0.00 42.76 5.87
81 82 0.107410 ATAATCAGGCCAACCGCGAA 60.107 50.000 8.23 0.00 42.76 4.70
82 83 1.022451 TAATCAGGCCAACCGCGAAC 61.022 55.000 8.23 0.00 42.76 3.95
83 84 3.545124 ATCAGGCCAACCGCGAACA 62.545 57.895 8.23 0.00 42.76 3.18
84 85 3.726517 CAGGCCAACCGCGAACAG 61.727 66.667 8.23 0.00 42.76 3.16
85 86 4.250305 AGGCCAACCGCGAACAGT 62.250 61.111 8.23 0.00 42.76 3.55
86 87 3.723348 GGCCAACCGCGAACAGTC 61.723 66.667 8.23 0.00 38.94 3.51
306 308 6.534793 TGCCATTATATGTCTATACGTGCATG 59.465 38.462 3.82 3.82 0.00 4.06
410 431 5.011431 AGGATCAATCGATCTAATCAGTGCA 59.989 40.000 0.00 0.00 46.30 4.57
420 441 0.608130 AATCAGTGCACTACTCGCCA 59.392 50.000 21.20 0.00 37.60 5.69
432 453 5.064707 GCACTACTCGCCAGAAATAAATTGA 59.935 40.000 0.00 0.00 0.00 2.57
606 627 4.920640 TCGTCCTGATGATTACTCTTCC 57.079 45.455 0.00 0.00 0.00 3.46
702 723 7.900864 CCGTGGTTTACAAAACTTCAATTTTTC 59.099 33.333 2.84 0.00 29.17 2.29
737 759 7.375053 ACGCATTAAAGTATTCAAAACCATGT 58.625 30.769 0.00 0.00 0.00 3.21
770 795 2.706890 ACCGCGGTATTGTGAGAAAAT 58.293 42.857 33.34 0.00 0.00 1.82
804 829 3.373565 GGCCAAACGGAGCCCAAG 61.374 66.667 0.00 0.00 43.76 3.61
805 830 2.597510 GCCAAACGGAGCCCAAGT 60.598 61.111 0.00 0.00 0.00 3.16
875 910 6.094464 GGCCGTACCAAATAAACTAGTCATTT 59.906 38.462 0.00 2.75 38.86 2.32
1189 1237 4.392940 GTCACATATGCCATTAGGAAGCT 58.607 43.478 1.58 0.00 36.89 3.74
1526 1574 2.043411 CCACGTTTTGACAAGAATGCG 58.957 47.619 0.00 0.00 0.00 4.73
1631 1679 2.645838 CCCTTAGCATGGCATGTAGT 57.354 50.000 26.94 15.17 0.00 2.73
1632 1680 3.769739 CCCTTAGCATGGCATGTAGTA 57.230 47.619 26.94 14.24 0.00 1.82
1667 1715 3.416156 CTGCCTTGGAGCTTAGTTTCTT 58.584 45.455 0.00 0.00 0.00 2.52
1715 1763 4.592485 TCGGTTGGTTTTGCATTACATT 57.408 36.364 0.00 0.00 0.00 2.71
1830 1878 4.530553 TCTTGTTGCAGTAGAAGGGTATGA 59.469 41.667 0.00 0.00 0.00 2.15
1874 1922 9.964354 ACTATTTGCATCTGCTATTTATGGATA 57.036 29.630 3.53 0.00 42.66 2.59
2007 2056 6.947733 TGTACCTTGAATCCTTGATGTGAAAT 59.052 34.615 0.00 0.00 0.00 2.17
2009 2058 6.694447 ACCTTGAATCCTTGATGTGAAATTG 58.306 36.000 0.00 0.00 0.00 2.32
2012 2061 5.957798 TGAATCCTTGATGTGAAATTGAGC 58.042 37.500 0.00 0.00 0.00 4.26
2107 2223 4.865365 CCTCCACTCTCTTTTAGTTTAGCG 59.135 45.833 0.00 0.00 0.00 4.26
2146 2262 2.523168 TGGACGAGCCACCAGTCA 60.523 61.111 0.00 0.00 43.33 3.41
2162 2278 0.321298 GTCAGGCGCAGGGAAGTAAA 60.321 55.000 10.83 0.00 0.00 2.01
2206 2322 4.717991 TCGCAATTGGTTATTCTTGTTCG 58.282 39.130 7.72 0.00 0.00 3.95
2260 2376 7.944729 TCCTCTTTGAATTAGAAATCCCAAG 57.055 36.000 0.00 0.00 0.00 3.61
2269 2385 9.699410 TGAATTAGAAATCCCAAGTTCACATAT 57.301 29.630 0.00 0.00 31.94 1.78
2321 2437 1.427072 CCCAGGTGGTCCAGGTCTTT 61.427 60.000 0.00 0.00 38.53 2.52
2346 2462 9.725019 TTATGGCATATAAGTGGAGATAACAAG 57.275 33.333 8.24 0.00 0.00 3.16
2353 2469 3.185455 AGTGGAGATAACAAGCTTCCCT 58.815 45.455 0.00 0.00 0.00 4.20
2358 2474 4.651962 GGAGATAACAAGCTTCCCTCTACT 59.348 45.833 0.00 0.00 0.00 2.57
2361 2477 2.217510 ACAAGCTTCCCTCTACTCGA 57.782 50.000 0.00 0.00 0.00 4.04
2542 2658 8.824783 TGGAAAATGGAAACCAGAATATCAATT 58.175 29.630 0.00 0.00 36.75 2.32
2665 2781 4.991687 GCTCAGTACATGTTTATAGGCCTC 59.008 45.833 9.68 0.00 0.00 4.70
2726 2842 1.991264 CACTCTGAAGACACATGAGCG 59.009 52.381 0.00 0.00 0.00 5.03
2757 2873 6.631238 CGGCCAACATCATAAGTTATTTTACG 59.369 38.462 2.24 0.00 0.00 3.18
2766 2882 8.500753 TCATAAGTTATTTTACGTGGATTGCT 57.499 30.769 0.00 0.00 0.00 3.91
2808 2924 2.373502 AGGCTTAACTTTGACCTGCTCT 59.626 45.455 0.00 0.00 0.00 4.09
2876 2992 2.565046 TCTGATTGCCACATGTCACA 57.435 45.000 0.00 0.00 0.00 3.58
2981 3097 8.132362 TCATTTATATGTGGGCGTGTTTTAATC 58.868 33.333 0.00 0.00 33.34 1.75
2991 3107 4.026407 GCGTGTTTTAATCGATGTAAGCC 58.974 43.478 0.00 0.00 0.00 4.35
3131 3256 6.545666 AGCAACCATATTACATTCATTTCCGA 59.454 34.615 0.00 0.00 0.00 4.55
3190 3315 5.163519 ACACTTGGACAAATTCAGAAGGTTG 60.164 40.000 7.52 7.52 0.00 3.77
3399 3526 1.349357 AGGTTCAAAGCTGTCTCCCTC 59.651 52.381 0.00 0.00 35.05 4.30
3470 3597 8.474831 ACTTTTTCTGCTAACACCTTTTGTAAT 58.525 29.630 0.00 0.00 37.51 1.89
3512 3639 5.776173 AGTGACTACTGTAGCATCCATAC 57.224 43.478 14.55 4.25 35.34 2.39
3652 3779 9.866655 AGTAGATCAAAATTATCCAGCCAATTA 57.133 29.630 0.00 0.00 0.00 1.40
3714 3841 2.691409 TCCATACCAGCAGTTGTAGC 57.309 50.000 0.00 0.00 0.00 3.58
3736 3863 9.743057 GTAGCCACAGATATGTAGATCATAATC 57.257 37.037 0.00 0.00 41.57 1.75
3816 3943 3.196901 TGCCTCACGGTGTAGACATTATT 59.803 43.478 8.17 0.00 0.00 1.40
3826 3953 7.776969 ACGGTGTAGACATTATTAGTAGGAAGA 59.223 37.037 0.00 0.00 0.00 2.87
3967 4103 4.536489 GGGTGGATAAGCTATTACCTGGAT 59.464 45.833 0.00 0.00 0.00 3.41
4071 4207 8.076178 GCTAAGTTGTCACACTATTGATGTTTT 58.924 33.333 0.00 0.00 0.00 2.43
4072 4208 9.950680 CTAAGTTGTCACACTATTGATGTTTTT 57.049 29.630 0.00 0.00 0.00 1.94
4214 4350 6.972328 ACGATGTATAATTGTGCCAATTTGTC 59.028 34.615 15.37 8.79 0.00 3.18
4753 4893 2.288763 GGTGTGCAATTTAACAGGGGTG 60.289 50.000 0.00 0.00 0.00 4.61
5047 5187 9.743057 TTTGATTAAACAACATTGAGTTCGATT 57.257 25.926 0.00 0.00 38.74 3.34
5115 5436 1.815003 CAGGAGACACATTTCCAAGCC 59.185 52.381 0.00 0.00 35.88 4.35
5128 5461 3.524095 TCCAAGCCCTCTCATTTTCAA 57.476 42.857 0.00 0.00 0.00 2.69
5129 5462 3.843422 TCCAAGCCCTCTCATTTTCAAA 58.157 40.909 0.00 0.00 0.00 2.69
5158 5491 8.499162 GCTAGTAGCACATTTATGGTTATTCAG 58.501 37.037 17.47 0.00 41.89 3.02
5180 5513 5.577164 CAGTATTACTCTGTCCGTTCCAAAG 59.423 44.000 0.00 0.00 0.00 2.77
5188 5521 3.986277 TGTCCGTTCCAAAGTAAGTCTC 58.014 45.455 0.00 0.00 0.00 3.36
5220 5629 2.288273 GGAACGGAGGGAGTATGAATCG 60.288 54.545 0.00 0.00 0.00 3.34
5289 5698 6.206634 TGTCAGGTTTGCATCTTAGGTAAAAG 59.793 38.462 0.00 0.00 0.00 2.27
5296 5705 3.621715 GCATCTTAGGTAAAAGTGTCCCG 59.378 47.826 0.00 0.00 0.00 5.14
5319 5728 0.474184 GGTAGCATGCCCCACTATGT 59.526 55.000 15.66 0.00 33.16 2.29
5351 5763 0.674581 TCAGCAACATTCGCTCCCAG 60.675 55.000 0.00 0.00 37.72 4.45
5355 5767 0.674581 CAACATTCGCTCCCAGCTCA 60.675 55.000 0.00 0.00 39.60 4.26
5371 5783 5.636543 CCCAGCTCAAAGAATTGACATTTTC 59.363 40.000 0.00 0.00 40.59 2.29
5378 5790 6.959366 TCAAAGAATTGACATTTTCCCCCTAT 59.041 34.615 0.00 0.00 40.59 2.57
5405 5817 5.933617 TCCATCCTCTCAAATTAGACATGG 58.066 41.667 0.00 5.66 34.65 3.66
5418 5830 2.787994 AGACATGGCTCTGTTCTTTGG 58.212 47.619 0.00 0.00 0.00 3.28
5442 5854 7.881232 TGGCTTAGTTTTTAGTGCTATACTGTT 59.119 33.333 0.00 0.00 40.65 3.16
5466 5878 9.612620 GTTGTTCTTGATCTCGTATTTTCATTT 57.387 29.630 0.00 0.00 0.00 2.32
5532 5945 5.277393 GCTGTTGAGCATAGATGATGTCTTG 60.277 44.000 0.00 0.00 45.46 3.02
5541 5955 6.071672 GCATAGATGATGTCTTGCCTAGAGTA 60.072 42.308 0.00 0.00 38.42 2.59
5598 6012 1.168714 GTGAGGTGGTGGCAGATTTC 58.831 55.000 0.00 0.00 0.00 2.17
5667 6081 3.191371 GTCCTCTTTGGCCATGTTTACAG 59.809 47.826 6.09 0.00 35.26 2.74
5700 6114 8.029522 TGCATCTTGTATCTTATATCTTCGTCC 58.970 37.037 0.00 0.00 0.00 4.79
5766 6181 6.981559 ACTTATTTGCGCCTTTTGAAACTTAA 59.018 30.769 4.18 0.00 0.00 1.85
5767 6182 7.492994 ACTTATTTGCGCCTTTTGAAACTTAAA 59.507 29.630 4.18 0.00 0.00 1.52
5841 6256 8.971073 TCACTCTGAATTTCTGATAGTATGACA 58.029 33.333 6.46 0.00 0.00 3.58
5842 6257 9.029243 CACTCTGAATTTCTGATAGTATGACAC 57.971 37.037 6.46 0.00 0.00 3.67
5843 6258 8.976353 ACTCTGAATTTCTGATAGTATGACACT 58.024 33.333 6.46 0.00 41.62 3.55
5949 6364 3.055819 TCCTGACTGCATCAAAGAGGTAC 60.056 47.826 0.00 0.00 36.69 3.34
5950 6365 3.055530 CCTGACTGCATCAAAGAGGTACT 60.056 47.826 0.00 0.00 38.26 2.73
5951 6366 4.193826 TGACTGCATCAAAGAGGTACTC 57.806 45.455 0.00 0.00 45.87 2.59
5952 6367 3.055819 TGACTGCATCAAAGAGGTACTCC 60.056 47.826 0.00 0.00 46.41 3.85
5953 6368 6.137583 TGACTGCATCAAAGAGGTACTCCC 62.138 50.000 0.00 0.00 46.41 4.30
5962 6377 2.432756 AGGTACTCCCTCCATCCCA 58.567 57.895 0.00 0.00 40.71 4.37
5963 6378 0.722676 AGGTACTCCCTCCATCCCAA 59.277 55.000 0.00 0.00 40.71 4.12
5964 6379 1.082194 AGGTACTCCCTCCATCCCAAA 59.918 52.381 0.00 0.00 40.71 3.28
5965 6380 1.920351 GGTACTCCCTCCATCCCAAAA 59.080 52.381 0.00 0.00 0.00 2.44
5966 6381 2.514160 GGTACTCCCTCCATCCCAAAAT 59.486 50.000 0.00 0.00 0.00 1.82
5967 6382 2.834638 ACTCCCTCCATCCCAAAATG 57.165 50.000 0.00 0.00 0.00 2.32
5968 6383 2.003072 ACTCCCTCCATCCCAAAATGT 58.997 47.619 0.00 0.00 0.00 2.71
5969 6384 3.197983 ACTCCCTCCATCCCAAAATGTA 58.802 45.455 0.00 0.00 0.00 2.29
5970 6385 3.596046 ACTCCCTCCATCCCAAAATGTAA 59.404 43.478 0.00 0.00 0.00 2.41
5971 6386 4.210331 CTCCCTCCATCCCAAAATGTAAG 58.790 47.826 0.00 0.00 0.00 2.34
5972 6387 3.855599 TCCCTCCATCCCAAAATGTAAGA 59.144 43.478 0.00 0.00 0.00 2.10
5973 6388 4.482025 TCCCTCCATCCCAAAATGTAAGAT 59.518 41.667 0.00 0.00 0.00 2.40
5974 6389 4.829492 CCCTCCATCCCAAAATGTAAGATC 59.171 45.833 0.00 0.00 0.00 2.75
5975 6390 5.448654 CCTCCATCCCAAAATGTAAGATCA 58.551 41.667 0.00 0.00 0.00 2.92
5976 6391 6.073314 CCTCCATCCCAAAATGTAAGATCAT 58.927 40.000 0.00 0.00 0.00 2.45
5977 6392 6.552350 CCTCCATCCCAAAATGTAAGATCATT 59.448 38.462 0.00 0.00 39.35 2.57
5978 6393 7.070322 CCTCCATCCCAAAATGTAAGATCATTT 59.930 37.037 0.00 0.00 45.94 2.32
6007 6422 5.869579 ACTGAATAGTGTCAAACATGGTCT 58.130 37.500 0.00 0.00 35.34 3.85
6008 6423 6.299141 ACTGAATAGTGTCAAACATGGTCTT 58.701 36.000 0.00 0.00 35.34 3.01
6009 6424 7.450074 ACTGAATAGTGTCAAACATGGTCTTA 58.550 34.615 0.00 0.00 35.34 2.10
6010 6425 7.387948 ACTGAATAGTGTCAAACATGGTCTTAC 59.612 37.037 0.00 0.00 35.34 2.34
6011 6426 7.220740 TGAATAGTGTCAAACATGGTCTTACA 58.779 34.615 0.00 0.00 0.00 2.41
6012 6427 7.882791 TGAATAGTGTCAAACATGGTCTTACAT 59.117 33.333 0.00 0.00 0.00 2.29
6013 6428 8.635765 AATAGTGTCAAACATGGTCTTACATT 57.364 30.769 0.00 0.00 0.00 2.71
6014 6429 6.959639 AGTGTCAAACATGGTCTTACATTT 57.040 33.333 0.00 0.00 0.00 2.32
6015 6430 7.346751 AGTGTCAAACATGGTCTTACATTTT 57.653 32.000 0.00 0.00 0.00 1.82
6016 6431 7.202526 AGTGTCAAACATGGTCTTACATTTTG 58.797 34.615 0.00 0.00 34.24 2.44
6017 6432 6.420604 GTGTCAAACATGGTCTTACATTTTGG 59.579 38.462 0.00 0.00 34.02 3.28
6018 6433 5.925969 GTCAAACATGGTCTTACATTTTGGG 59.074 40.000 0.00 0.00 34.02 4.12
6019 6434 5.835819 TCAAACATGGTCTTACATTTTGGGA 59.164 36.000 0.00 0.00 34.02 4.37
6020 6435 6.496565 TCAAACATGGTCTTACATTTTGGGAT 59.503 34.615 0.00 0.00 34.02 3.85
6021 6436 5.920193 ACATGGTCTTACATTTTGGGATG 57.080 39.130 0.00 0.00 0.00 3.51
6022 6437 4.711355 ACATGGTCTTACATTTTGGGATGG 59.289 41.667 0.00 0.00 0.00 3.51
6023 6438 4.666412 TGGTCTTACATTTTGGGATGGA 57.334 40.909 0.00 0.00 0.00 3.41
6024 6439 4.599041 TGGTCTTACATTTTGGGATGGAG 58.401 43.478 0.00 0.00 0.00 3.86
6025 6440 3.954258 GGTCTTACATTTTGGGATGGAGG 59.046 47.826 0.00 0.00 0.00 4.30
6026 6441 3.954258 GTCTTACATTTTGGGATGGAGGG 59.046 47.826 0.00 0.00 0.00 4.30
6027 6442 3.052944 TCTTACATTTTGGGATGGAGGGG 60.053 47.826 0.00 0.00 0.00 4.79
6053 6468 9.379791 GTAGGAAACTATGCTTAGTATGTTGTT 57.620 33.333 12.28 2.81 46.56 2.83
6216 6631 2.183555 CCCGGTGAACGTAGCTCC 59.816 66.667 0.00 0.00 42.24 4.70
6240 6655 4.260620 CGCTTGCAGTAACACACTACTTTT 60.261 41.667 0.00 0.00 34.98 2.27
6241 6656 5.205565 GCTTGCAGTAACACACTACTTTTC 58.794 41.667 0.00 0.00 34.98 2.29
6251 6782 9.538508 GTAACACACTACTTTTCTTTAAGAGGA 57.461 33.333 0.00 0.00 0.00 3.71
6270 6801 2.559440 GAGAATTACCCTGAGCAGCAG 58.441 52.381 0.00 0.00 44.49 4.24
6336 6867 4.464597 CCCCTCTAGCTAACAGATGGATAC 59.535 50.000 7.64 0.00 31.45 2.24
6381 6912 1.549203 AATGCGGATTTCCACTGCTT 58.451 45.000 0.00 0.00 39.95 3.91
6382 6913 1.549203 ATGCGGATTTCCACTGCTTT 58.451 45.000 0.00 0.00 39.95 3.51
6392 6923 3.769739 TCCACTGCTTTGTACACTGAT 57.230 42.857 0.00 0.00 0.00 2.90
6425 6956 3.245087 ACATGCAATTACCCTGGTGTACA 60.245 43.478 0.00 0.00 0.00 2.90
6434 6965 4.503714 ACCCTGGTGTACATAATGAAGG 57.496 45.455 0.00 0.50 0.00 3.46
6456 6987 1.080569 CATGGGTTTCTTGCGTGCC 60.081 57.895 0.00 0.00 0.00 5.01
6483 7014 9.798994 GAAATGAGATGCTTGATAAATGTTCTT 57.201 29.630 0.00 0.00 0.00 2.52
6484 7015 9.798994 AAATGAGATGCTTGATAAATGTTCTTC 57.201 29.630 0.00 0.00 0.00 2.87
6487 7018 9.017509 TGAGATGCTTGATAAATGTTCTTCTTT 57.982 29.630 0.00 0.00 0.00 2.52
6577 7108 9.738832 TTAACTGGTTTTTGAACTACTTAATGC 57.261 29.630 0.00 0.00 0.00 3.56
6652 7186 6.657541 CACAGTTGTACCACCCAATTTATACT 59.342 38.462 0.00 0.00 0.00 2.12
6706 7241 6.034256 GTGTTTTCTGCATATCAACAAGATGC 59.966 38.462 0.00 0.00 45.02 3.91
6804 7341 1.172180 TTCACCAAGAAAGCAGCCGG 61.172 55.000 0.00 0.00 32.05 6.13
6805 7342 2.282462 ACCAAGAAAGCAGCCGGG 60.282 61.111 2.18 0.00 0.00 5.73
6875 7412 0.243907 CAAGACGGCGAAAGAGGAGA 59.756 55.000 16.62 0.00 0.00 3.71
6892 7429 2.298446 GGAGAGCGATGATGATTCAGGA 59.702 50.000 0.00 0.00 34.73 3.86
6898 7435 5.374921 AGCGATGATGATTCAGGAGAAAAT 58.625 37.500 0.00 0.00 37.29 1.82
6917 7454 8.010733 AGAAAATCCATCAAACAAAACAGAGA 57.989 30.769 0.00 0.00 0.00 3.10
6920 7457 9.447157 AAAATCCATCAAACAAAACAGAGAAAA 57.553 25.926 0.00 0.00 0.00 2.29
6921 7458 9.617523 AAATCCATCAAACAAAACAGAGAAAAT 57.382 25.926 0.00 0.00 0.00 1.82
6925 7462 7.658575 CCATCAAACAAAACAGAGAAAATCCAT 59.341 33.333 0.00 0.00 0.00 3.41
6928 7465 8.256605 TCAAACAAAACAGAGAAAATCCATCAA 58.743 29.630 0.00 0.00 0.00 2.57
6929 7466 8.881743 CAAACAAAACAGAGAAAATCCATCAAA 58.118 29.630 0.00 0.00 0.00 2.69
6947 7508 7.876068 TCCATCAAACAAGTACAGTAGTTAAGG 59.124 37.037 0.00 0.00 0.00 2.69
6988 7549 7.175104 TGGATCCACAAGTTTTCTATAAAGCT 58.825 34.615 11.44 0.00 37.71 3.74
7024 7585 1.841302 AAGAAGACGGGATGCTGCCA 61.841 55.000 0.00 0.00 0.00 4.92
7078 7639 5.246656 CAGCATCAAGAGGAAGATAGAGGAT 59.753 44.000 0.00 0.00 0.00 3.24
7131 7692 3.606662 CGGGAGATCGCCGGTCAT 61.607 66.667 13.89 0.00 0.00 3.06
7360 7972 3.654178 GCTTGGCCAATACTGCATG 57.346 52.632 20.85 5.61 0.00 4.06
7361 7973 0.529119 GCTTGGCCAATACTGCATGC 60.529 55.000 20.85 11.82 0.00 4.06
7362 7974 0.818938 CTTGGCCAATACTGCATGCA 59.181 50.000 20.85 21.29 0.00 3.96
7363 7975 1.411246 CTTGGCCAATACTGCATGCAT 59.589 47.619 22.97 13.83 0.00 3.96
7364 7976 2.361643 TGGCCAATACTGCATGCATA 57.638 45.000 22.97 15.56 0.00 3.14
7365 7977 2.232399 TGGCCAATACTGCATGCATAG 58.768 47.619 22.97 13.40 0.00 2.23
7366 7978 1.068055 GGCCAATACTGCATGCATAGC 60.068 52.381 22.97 16.43 0.00 2.97
7367 7979 1.400629 GCCAATACTGCATGCATAGCG 60.401 52.381 22.97 12.19 33.85 4.26
7368 7980 1.400629 CCAATACTGCATGCATAGCGC 60.401 52.381 22.97 0.00 42.89 5.92
7369 7981 0.877071 AATACTGCATGCATAGCGCC 59.123 50.000 22.97 0.00 41.33 6.53
7370 7982 0.250424 ATACTGCATGCATAGCGCCA 60.250 50.000 22.97 1.42 41.33 5.69
7371 7983 0.881600 TACTGCATGCATAGCGCCAG 60.882 55.000 22.97 9.38 41.33 4.85
7372 7984 2.124612 TGCATGCATAGCGCCAGT 60.125 55.556 18.46 0.00 41.33 4.00
7373 7985 1.721664 CTGCATGCATAGCGCCAGTT 61.722 55.000 22.97 0.00 41.33 3.16
7374 7986 0.463474 TGCATGCATAGCGCCAGTTA 60.463 50.000 18.46 0.00 41.33 2.24
7375 7987 0.236711 GCATGCATAGCGCCAGTTAG 59.763 55.000 14.21 0.00 41.33 2.34
7376 7988 0.870393 CATGCATAGCGCCAGTTAGG 59.130 55.000 2.29 0.00 41.33 2.69
7377 7989 0.758734 ATGCATAGCGCCAGTTAGGA 59.241 50.000 2.29 0.00 41.22 2.94
7378 7990 0.539518 TGCATAGCGCCAGTTAGGAA 59.460 50.000 2.29 0.00 41.22 3.36
7379 7991 1.140852 TGCATAGCGCCAGTTAGGAAT 59.859 47.619 2.29 0.00 41.22 3.01
7380 7992 1.532868 GCATAGCGCCAGTTAGGAATG 59.467 52.381 2.29 0.00 41.22 2.67
7381 7993 2.838736 CATAGCGCCAGTTAGGAATGT 58.161 47.619 2.29 0.00 41.22 2.71
7382 7994 3.206150 CATAGCGCCAGTTAGGAATGTT 58.794 45.455 2.29 0.00 41.22 2.71
7383 7995 1.453155 AGCGCCAGTTAGGAATGTTG 58.547 50.000 2.29 0.00 41.22 3.33
7384 7996 0.451783 GCGCCAGTTAGGAATGTTGG 59.548 55.000 0.00 0.00 41.22 3.77
7385 7997 1.094785 CGCCAGTTAGGAATGTTGGG 58.905 55.000 0.00 0.00 41.22 4.12
7386 7998 1.339631 CGCCAGTTAGGAATGTTGGGA 60.340 52.381 0.00 0.00 41.22 4.37
7387 7999 2.802719 GCCAGTTAGGAATGTTGGGAA 58.197 47.619 0.00 0.00 41.22 3.97
7388 8000 3.365472 GCCAGTTAGGAATGTTGGGAAT 58.635 45.455 0.00 0.00 41.22 3.01
7389 8001 3.769300 GCCAGTTAGGAATGTTGGGAATT 59.231 43.478 0.00 0.00 41.22 2.17
7390 8002 4.953579 GCCAGTTAGGAATGTTGGGAATTA 59.046 41.667 0.00 0.00 41.22 1.40
7391 8003 5.067805 GCCAGTTAGGAATGTTGGGAATTAG 59.932 44.000 0.00 0.00 41.22 1.73
7392 8004 6.187682 CCAGTTAGGAATGTTGGGAATTAGT 58.812 40.000 0.00 0.00 41.22 2.24
7393 8005 6.663523 CCAGTTAGGAATGTTGGGAATTAGTT 59.336 38.462 0.00 0.00 41.22 2.24
7394 8006 7.148069 CCAGTTAGGAATGTTGGGAATTAGTTC 60.148 40.741 0.00 0.00 41.22 3.01
7395 8007 7.393234 CAGTTAGGAATGTTGGGAATTAGTTCA 59.607 37.037 0.03 0.00 36.01 3.18
7396 8008 7.611855 AGTTAGGAATGTTGGGAATTAGTTCAG 59.388 37.037 0.03 0.00 36.01 3.02
7397 8009 6.139679 AGGAATGTTGGGAATTAGTTCAGA 57.860 37.500 0.03 0.00 36.01 3.27
7398 8010 6.552008 AGGAATGTTGGGAATTAGTTCAGAA 58.448 36.000 0.03 0.00 36.01 3.02
7399 8011 6.660949 AGGAATGTTGGGAATTAGTTCAGAAG 59.339 38.462 0.03 0.00 36.01 2.85
7400 8012 6.434340 GGAATGTTGGGAATTAGTTCAGAAGT 59.566 38.462 0.03 0.00 36.01 3.01
7401 8013 7.039714 GGAATGTTGGGAATTAGTTCAGAAGTT 60.040 37.037 0.00 0.00 36.01 2.66
7402 8014 6.633500 TGTTGGGAATTAGTTCAGAAGTTG 57.367 37.500 0.00 0.00 36.01 3.16
7403 8015 6.126409 TGTTGGGAATTAGTTCAGAAGTTGT 58.874 36.000 0.00 0.00 36.01 3.32
7404 8016 6.039270 TGTTGGGAATTAGTTCAGAAGTTGTG 59.961 38.462 0.00 0.00 36.01 3.33
7405 8017 5.070001 TGGGAATTAGTTCAGAAGTTGTGG 58.930 41.667 0.00 0.00 36.01 4.17
7406 8018 5.070685 GGGAATTAGTTCAGAAGTTGTGGT 58.929 41.667 0.00 0.00 36.01 4.16
7407 8019 5.535030 GGGAATTAGTTCAGAAGTTGTGGTT 59.465 40.000 0.00 0.00 36.01 3.67
7408 8020 6.040504 GGGAATTAGTTCAGAAGTTGTGGTTT 59.959 38.462 0.00 0.00 36.01 3.27
7409 8021 7.417456 GGGAATTAGTTCAGAAGTTGTGGTTTT 60.417 37.037 0.00 0.00 36.01 2.43
7410 8022 7.435192 GGAATTAGTTCAGAAGTTGTGGTTTTG 59.565 37.037 0.00 0.00 36.01 2.44
7411 8023 6.827586 TTAGTTCAGAAGTTGTGGTTTTGT 57.172 33.333 0.00 0.00 0.00 2.83
7412 8024 5.059404 AGTTCAGAAGTTGTGGTTTTGTG 57.941 39.130 0.00 0.00 0.00 3.33
7413 8025 4.522789 AGTTCAGAAGTTGTGGTTTTGTGT 59.477 37.500 0.00 0.00 0.00 3.72
7414 8026 5.010617 AGTTCAGAAGTTGTGGTTTTGTGTT 59.989 36.000 0.00 0.00 0.00 3.32
7415 8027 6.207810 AGTTCAGAAGTTGTGGTTTTGTGTTA 59.792 34.615 0.00 0.00 0.00 2.41
7416 8028 5.945155 TCAGAAGTTGTGGTTTTGTGTTAC 58.055 37.500 0.00 0.00 0.00 2.50
7417 8029 5.473846 TCAGAAGTTGTGGTTTTGTGTTACA 59.526 36.000 0.00 0.00 0.00 2.41
7418 8030 6.016192 TCAGAAGTTGTGGTTTTGTGTTACAA 60.016 34.615 0.00 0.00 36.11 2.41
7419 8031 6.642950 CAGAAGTTGTGGTTTTGTGTTACAAA 59.357 34.615 3.20 3.20 45.37 2.83
7465 8077 6.635030 AACCACAACTTCTGAACTAATTCC 57.365 37.500 0.00 0.00 33.49 3.01
7480 8092 1.560505 ATTCCCAACATTGAGCCCAC 58.439 50.000 0.00 0.00 0.00 4.61
7482 8094 0.187117 TCCCAACATTGAGCCCACAA 59.813 50.000 0.00 0.00 0.00 3.33
7500 8112 5.180117 CCCACAACTATCAGTCAACTTCTTG 59.820 44.000 0.00 0.00 0.00 3.02
7626 8238 0.526954 CGTACCGGCGCTATGAACTT 60.527 55.000 7.64 0.00 0.00 2.66
7664 8277 1.598130 GAGCTGAGCGTTGTTGGGT 60.598 57.895 0.00 0.00 0.00 4.51
7665 8278 1.152963 AGCTGAGCGTTGTTGGGTT 60.153 52.632 0.00 0.00 0.00 4.11
7668 8281 0.738389 CTGAGCGTTGTTGGGTTTGT 59.262 50.000 0.00 0.00 0.00 2.83
7669 8282 0.736053 TGAGCGTTGTTGGGTTTGTC 59.264 50.000 0.00 0.00 0.00 3.18
7713 8328 2.419198 GAGCATCCTCGATGGCGT 59.581 61.111 3.94 0.00 40.10 5.68
7758 8373 0.943835 CCGCATGTCACTGTCGTTGA 60.944 55.000 0.00 0.00 0.00 3.18
7822 8438 2.889578 GCACATTGCAGTGGTTGTG 58.110 52.632 14.25 11.63 44.26 3.33
7823 8439 0.385029 GCACATTGCAGTGGTTGTGA 59.615 50.000 14.25 0.00 44.26 3.58
7824 8440 1.202394 GCACATTGCAGTGGTTGTGAA 60.202 47.619 14.25 0.00 44.26 3.18
7832 8448 2.351157 GCAGTGGTTGTGAAGAAGCATC 60.351 50.000 0.00 0.00 35.86 3.91
7883 8500 2.359107 CACGGATGTGCTGGCAGT 60.359 61.111 17.16 0.00 39.67 4.40
7937 8554 2.350007 CGCGATAACTAGACAGAGAGGC 60.350 54.545 0.00 0.00 0.00 4.70
8146 8763 1.590525 GCAGGTGAACGTGTCGTCA 60.591 57.895 5.17 0.00 39.99 4.35
8199 8816 6.348458 GCTATGTTACACAAATTCAGTCAGCA 60.348 38.462 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.823989 CCCAATAATCATGACTCAAGACCC 59.176 45.833 0.00 0.00 0.00 4.46
2 3 5.440610 ACCCAATAATCATGACTCAAGACC 58.559 41.667 0.00 0.00 0.00 3.85
3 4 7.254455 CGTAACCCAATAATCATGACTCAAGAC 60.254 40.741 0.00 0.00 0.00 3.01
4 5 6.761242 CGTAACCCAATAATCATGACTCAAGA 59.239 38.462 0.00 0.00 0.00 3.02
6 7 5.820423 CCGTAACCCAATAATCATGACTCAA 59.180 40.000 0.00 0.00 0.00 3.02
9 10 4.134563 GCCGTAACCCAATAATCATGACT 58.865 43.478 0.00 0.00 0.00 3.41
10 11 3.059188 CGCCGTAACCCAATAATCATGAC 60.059 47.826 0.00 0.00 0.00 3.06
11 12 3.135225 CGCCGTAACCCAATAATCATGA 58.865 45.455 0.00 0.00 0.00 3.07
12 13 3.135225 TCGCCGTAACCCAATAATCATG 58.865 45.455 0.00 0.00 0.00 3.07
13 14 3.478857 TCGCCGTAACCCAATAATCAT 57.521 42.857 0.00 0.00 0.00 2.45
14 15 2.983907 TCGCCGTAACCCAATAATCA 57.016 45.000 0.00 0.00 0.00 2.57
15 16 3.810941 TCATTCGCCGTAACCCAATAATC 59.189 43.478 0.00 0.00 0.00 1.75
16 17 3.562557 GTCATTCGCCGTAACCCAATAAT 59.437 43.478 0.00 0.00 0.00 1.28
17 18 2.937799 GTCATTCGCCGTAACCCAATAA 59.062 45.455 0.00 0.00 0.00 1.40
18 19 2.168936 AGTCATTCGCCGTAACCCAATA 59.831 45.455 0.00 0.00 0.00 1.90
19 20 1.065709 AGTCATTCGCCGTAACCCAAT 60.066 47.619 0.00 0.00 0.00 3.16
20 21 0.322322 AGTCATTCGCCGTAACCCAA 59.678 50.000 0.00 0.00 0.00 4.12
21 22 0.322322 AAGTCATTCGCCGTAACCCA 59.678 50.000 0.00 0.00 0.00 4.51
22 23 1.445871 AAAGTCATTCGCCGTAACCC 58.554 50.000 0.00 0.00 0.00 4.11
23 24 3.187842 AGAAAAAGTCATTCGCCGTAACC 59.812 43.478 0.00 0.00 32.04 2.85
24 25 4.400036 AGAAAAAGTCATTCGCCGTAAC 57.600 40.909 0.00 0.00 32.04 2.50
25 26 6.812656 TGTATAGAAAAAGTCATTCGCCGTAA 59.187 34.615 0.00 0.00 32.04 3.18
26 27 6.331845 TGTATAGAAAAAGTCATTCGCCGTA 58.668 36.000 0.00 0.00 32.04 4.02
27 28 5.172934 TGTATAGAAAAAGTCATTCGCCGT 58.827 37.500 0.00 0.00 32.04 5.68
28 29 5.291128 ACTGTATAGAAAAAGTCATTCGCCG 59.709 40.000 0.00 0.00 32.04 6.46
29 30 6.663944 ACTGTATAGAAAAAGTCATTCGCC 57.336 37.500 0.00 0.00 32.04 5.54
30 31 8.321716 CAGTACTGTATAGAAAAAGTCATTCGC 58.678 37.037 15.06 0.00 32.04 4.70
31 32 9.569167 TCAGTACTGTATAGAAAAAGTCATTCG 57.431 33.333 21.99 0.00 32.04 3.34
46 47 8.368668 GGCCTGATTATTACTTCAGTACTGTAT 58.631 37.037 21.99 11.33 38.12 2.29
47 48 7.343574 TGGCCTGATTATTACTTCAGTACTGTA 59.656 37.037 21.99 12.28 38.12 2.74
48 49 6.156256 TGGCCTGATTATTACTTCAGTACTGT 59.844 38.462 21.99 6.25 38.12 3.55
49 50 6.582636 TGGCCTGATTATTACTTCAGTACTG 58.417 40.000 17.17 17.17 38.12 2.74
50 51 6.808321 TGGCCTGATTATTACTTCAGTACT 57.192 37.500 3.32 0.00 38.12 2.73
51 52 6.260271 GGTTGGCCTGATTATTACTTCAGTAC 59.740 42.308 3.32 0.00 38.12 2.73
52 53 6.354130 GGTTGGCCTGATTATTACTTCAGTA 58.646 40.000 3.32 0.00 38.12 2.74
53 54 5.193679 GGTTGGCCTGATTATTACTTCAGT 58.806 41.667 3.32 0.00 38.12 3.41
54 55 4.273480 CGGTTGGCCTGATTATTACTTCAG 59.727 45.833 3.32 0.00 39.25 3.02
55 56 4.196193 CGGTTGGCCTGATTATTACTTCA 58.804 43.478 3.32 0.00 0.00 3.02
56 57 3.003378 GCGGTTGGCCTGATTATTACTTC 59.997 47.826 3.32 0.00 34.80 3.01
57 58 2.949644 GCGGTTGGCCTGATTATTACTT 59.050 45.455 3.32 0.00 34.80 2.24
58 59 2.572290 GCGGTTGGCCTGATTATTACT 58.428 47.619 3.32 0.00 34.80 2.24
59 60 1.263217 CGCGGTTGGCCTGATTATTAC 59.737 52.381 3.32 0.00 38.94 1.89
60 61 1.139256 TCGCGGTTGGCCTGATTATTA 59.861 47.619 6.13 0.00 38.94 0.98
61 62 0.107410 TCGCGGTTGGCCTGATTATT 60.107 50.000 6.13 0.00 38.94 1.40
62 63 0.107410 TTCGCGGTTGGCCTGATTAT 60.107 50.000 6.13 0.00 38.94 1.28
63 64 1.022451 GTTCGCGGTTGGCCTGATTA 61.022 55.000 6.13 0.00 38.94 1.75
64 65 2.033448 TTCGCGGTTGGCCTGATT 59.967 55.556 6.13 0.00 38.94 2.57
65 66 2.746277 GTTCGCGGTTGGCCTGAT 60.746 61.111 6.13 0.00 38.94 2.90
66 67 4.243008 TGTTCGCGGTTGGCCTGA 62.243 61.111 6.13 0.00 38.94 3.86
67 68 3.726517 CTGTTCGCGGTTGGCCTG 61.727 66.667 6.13 0.00 38.94 4.85
68 69 4.250305 ACTGTTCGCGGTTGGCCT 62.250 61.111 6.13 0.00 38.94 5.19
69 70 3.723348 GACTGTTCGCGGTTGGCC 61.723 66.667 6.13 0.00 36.72 5.36
70 71 2.443957 CTTGACTGTTCGCGGTTGGC 62.444 60.000 6.13 0.00 36.72 4.52
71 72 1.569493 CTTGACTGTTCGCGGTTGG 59.431 57.895 6.13 0.00 36.72 3.77
72 73 1.569493 CCTTGACTGTTCGCGGTTG 59.431 57.895 6.13 0.00 36.72 3.77
73 74 1.597027 CCCTTGACTGTTCGCGGTT 60.597 57.895 6.13 0.00 36.72 4.44
74 75 2.030562 CCCTTGACTGTTCGCGGT 59.969 61.111 6.13 0.00 39.90 5.68
75 76 2.501223 TAGCCCTTGACTGTTCGCGG 62.501 60.000 6.13 0.00 0.00 6.46
76 77 1.078759 CTAGCCCTTGACTGTTCGCG 61.079 60.000 0.00 0.00 0.00 5.87
77 78 0.037232 ACTAGCCCTTGACTGTTCGC 60.037 55.000 0.00 0.00 0.00 4.70
78 79 2.457366 AACTAGCCCTTGACTGTTCG 57.543 50.000 0.00 0.00 0.00 3.95
79 80 2.814336 CCAAACTAGCCCTTGACTGTTC 59.186 50.000 0.00 0.00 0.00 3.18
80 81 2.441750 TCCAAACTAGCCCTTGACTGTT 59.558 45.455 0.00 0.00 0.00 3.16
81 82 2.054799 TCCAAACTAGCCCTTGACTGT 58.945 47.619 0.00 0.00 0.00 3.55
82 83 2.859165 TCCAAACTAGCCCTTGACTG 57.141 50.000 0.00 0.00 0.00 3.51
83 84 2.553247 GCTTCCAAACTAGCCCTTGACT 60.553 50.000 0.00 0.00 0.00 3.41
84 85 1.813178 GCTTCCAAACTAGCCCTTGAC 59.187 52.381 0.00 0.00 0.00 3.18
85 86 1.423541 TGCTTCCAAACTAGCCCTTGA 59.576 47.619 0.00 0.00 36.56 3.02
86 87 1.909700 TGCTTCCAAACTAGCCCTTG 58.090 50.000 0.00 0.00 36.56 3.61
306 308 5.972382 TGTAAACAACGGCACAAAAGAATAC 59.028 36.000 0.00 0.00 0.00 1.89
358 378 1.512926 AAACCACTCGTTAGCAGCAG 58.487 50.000 0.00 0.00 33.05 4.24
410 431 6.170506 TGTCAATTTATTTCTGGCGAGTAGT 58.829 36.000 0.00 0.00 0.00 2.73
420 441 6.012745 AGTCCTTGGCTGTCAATTTATTTCT 58.987 36.000 0.00 0.00 34.45 2.52
432 453 0.904865 TCCATCGAGTCCTTGGCTGT 60.905 55.000 0.00 0.00 0.00 4.40
702 723 3.900941 ACTTTAATGCGTTTGGCTTCAG 58.099 40.909 0.00 0.00 44.05 3.02
801 826 3.694072 TGGAAAACAGAGTTGGACACTTG 59.306 43.478 0.00 0.00 35.01 3.16
802 827 3.963129 TGGAAAACAGAGTTGGACACTT 58.037 40.909 0.00 0.00 35.01 3.16
803 828 3.644966 TGGAAAACAGAGTTGGACACT 57.355 42.857 0.00 0.00 39.07 3.55
804 829 4.421058 GTTTGGAAAACAGAGTTGGACAC 58.579 43.478 0.00 0.00 0.00 3.67
805 830 3.445805 GGTTTGGAAAACAGAGTTGGACA 59.554 43.478 5.33 0.00 0.00 4.02
1189 1237 5.055642 TCGAATAGCTGAAGAAACGAGAA 57.944 39.130 0.00 0.00 0.00 2.87
1412 1460 3.056179 TGTGGAAAGTCAGTGCATATCGA 60.056 43.478 0.00 0.00 0.00 3.59
1526 1574 0.252761 CCCATTGGCCCAAATCAACC 59.747 55.000 0.00 0.00 0.00 3.77
1630 1678 2.162681 GGCAGGCATGGTCCAATATAC 58.837 52.381 0.00 0.00 0.00 1.47
1631 1679 2.065007 AGGCAGGCATGGTCCAATATA 58.935 47.619 0.00 0.00 0.00 0.86
1632 1680 0.855598 AGGCAGGCATGGTCCAATAT 59.144 50.000 0.00 0.00 0.00 1.28
1667 1715 9.399797 ACATTGAATGAGCATAGAGACATAAAA 57.600 29.630 12.80 0.00 0.00 1.52
1874 1922 8.874156 TGCTTAGGATCAACAGAGATATAACAT 58.126 33.333 0.00 0.00 0.00 2.71
2007 2056 4.777896 AGAGTAATAACTGACAGGGCTCAA 59.222 41.667 7.51 0.00 35.56 3.02
2009 2058 4.402793 TCAGAGTAATAACTGACAGGGCTC 59.597 45.833 7.51 5.05 38.08 4.70
2012 2061 6.287589 ACTTCAGAGTAATAACTGACAGGG 57.712 41.667 7.51 0.00 41.82 4.45
2146 2262 1.272807 TACTTTACTTCCCTGCGCCT 58.727 50.000 4.18 0.00 0.00 5.52
2177 2293 9.507329 ACAAGAATAACCAATTGCGATATCTAT 57.493 29.630 0.00 0.00 0.00 1.98
2201 2317 8.722480 AAATTACTCATGATCTTGATCGAACA 57.278 30.769 11.38 0.00 0.00 3.18
2250 2366 8.616076 CAGAAGTATATGTGAACTTGGGATTTC 58.384 37.037 0.00 0.00 36.10 2.17
2269 2385 9.453572 AATGAAAGCTGTATCAATTCAGAAGTA 57.546 29.630 0.00 0.00 33.91 2.24
2321 2437 7.824289 GCTTGTTATCTCCACTTATATGCCATA 59.176 37.037 0.00 0.00 0.00 2.74
2346 2462 0.747255 TGCATCGAGTAGAGGGAAGC 59.253 55.000 0.00 0.00 0.00 3.86
2353 2469 1.114627 AGGCACATGCATCGAGTAGA 58.885 50.000 6.15 0.00 44.36 2.59
2358 2474 2.031870 AGTAGTAGGCACATGCATCGA 58.968 47.619 6.15 0.00 44.36 3.59
2361 2477 4.130118 GCTTTAGTAGTAGGCACATGCAT 58.870 43.478 6.15 0.39 44.36 3.96
2467 2583 8.706035 GCTTCTACGTTTCAGTTGTTAATCTAA 58.294 33.333 0.00 0.00 0.00 2.10
2528 2644 8.806429 TCAATGTGTGTAATTGATATTCTGGT 57.194 30.769 0.00 0.00 38.73 4.00
2616 2732 8.082242 CACTTTGCTTTTACCAGCTAATAGTTT 58.918 33.333 0.00 0.00 40.79 2.66
2619 2735 6.030228 GCACTTTGCTTTTACCAGCTAATAG 58.970 40.000 0.00 0.00 40.96 1.73
2637 2753 6.316390 GCCTATAAACATGTACTGAGCACTTT 59.684 38.462 0.00 0.00 0.00 2.66
2645 2761 7.624360 TTTTGAGGCCTATAAACATGTACTG 57.376 36.000 4.42 0.00 0.00 2.74
2665 2781 9.793252 ACATTTAGCTCAGCTGTATTTATTTTG 57.207 29.630 10.31 5.57 40.10 2.44
2726 2842 1.308047 TATGATGTTGGCCGTCATGC 58.692 50.000 15.59 8.92 46.84 4.06
2733 2849 7.431084 CACGTAAAATAACTTATGATGTTGGCC 59.569 37.037 0.00 0.00 0.00 5.36
2735 2851 8.670135 TCCACGTAAAATAACTTATGATGTTGG 58.330 33.333 0.00 0.00 0.00 3.77
2757 2873 4.458989 TCTGGTAAATCAACAGCAATCCAC 59.541 41.667 0.00 0.00 32.42 4.02
2766 2882 5.556915 CCTGGTACTTCTGGTAAATCAACA 58.443 41.667 0.00 0.00 31.56 3.33
2808 2924 1.289066 CTCGCCTCAACTCCGAACA 59.711 57.895 0.00 0.00 0.00 3.18
2981 3097 5.527214 TGTTATCATTCAAGGGCTTACATCG 59.473 40.000 0.00 0.00 0.00 3.84
3103 3228 9.034544 GGAAATGAATGTAATATGGTTGCTTTC 57.965 33.333 0.00 0.00 0.00 2.62
3131 3256 1.949799 ACACAAGAGGCCTCTCATCT 58.050 50.000 35.18 17.54 42.34 2.90
3190 3315 7.335171 ACGGAATGTGTAAAAACTAAGTATCCC 59.665 37.037 0.00 0.00 0.00 3.85
3399 3526 3.980646 TGAATCACAGGAACAAAACGG 57.019 42.857 0.00 0.00 0.00 4.44
3470 3597 9.515226 AGTCACTAAACATTTGGCTAGAATAAA 57.485 29.630 0.00 0.00 0.00 1.40
3488 3615 6.017357 CGTATGGATGCTACAGTAGTCACTAA 60.017 42.308 9.42 0.00 32.21 2.24
3526 3653 2.025793 TCTTCCAACTGACACCACCAAA 60.026 45.455 0.00 0.00 0.00 3.28
3644 3771 5.627503 GCCCAAATGTCTGAATTAATTGGCT 60.628 40.000 5.17 0.00 35.61 4.75
3652 3779 7.427989 AATTATGAGCCCAAATGTCTGAATT 57.572 32.000 0.00 0.00 0.00 2.17
3689 3816 7.106239 GCTACAACTGCTGGTATGGATATATT 58.894 38.462 0.00 0.00 0.00 1.28
3703 3830 3.198635 ACATATCTGTGGCTACAACTGCT 59.801 43.478 3.88 0.00 36.14 4.24
3714 3841 7.776107 ACCGATTATGATCTACATATCTGTGG 58.224 38.462 0.00 0.00 40.56 4.17
3736 3863 5.701290 ACAAATTCTTCCTGTCTCTAAACCG 59.299 40.000 0.00 0.00 0.00 4.44
3875 4002 8.319057 ACAGTGATTATTCATGAGGGTAGTAA 57.681 34.615 0.00 0.00 33.56 2.24
3967 4103 1.702401 TGTTCTACCAATGTCCAGCCA 59.298 47.619 0.00 0.00 0.00 4.75
4073 4209 9.429359 ACAAAACATCAATAGTGTTTGTCAAAA 57.571 25.926 0.00 0.00 46.01 2.44
4074 4210 8.994429 ACAAAACATCAATAGTGTTTGTCAAA 57.006 26.923 5.16 0.00 46.01 2.69
4075 4211 9.729023 CTACAAAACATCAATAGTGTTTGTCAA 57.271 29.630 11.40 0.00 46.01 3.18
4076 4212 8.898761 ACTACAAAACATCAATAGTGTTTGTCA 58.101 29.630 11.40 1.85 46.01 3.58
4137 4273 1.986882 AGGAAAAGGCAGACCACAAG 58.013 50.000 0.00 0.00 39.06 3.16
4714 4854 5.245531 CACACCAGCAGAAATCCTTACTAA 58.754 41.667 0.00 0.00 0.00 2.24
4716 4856 3.679389 CACACCAGCAGAAATCCTTACT 58.321 45.455 0.00 0.00 0.00 2.24
4753 4893 6.165700 ACCAAAATGAGGCATTATCCATTC 57.834 37.500 0.00 0.00 32.43 2.67
4800 4940 4.341806 TGCATCTCACAGAAACACCATTTT 59.658 37.500 0.00 0.00 0.00 1.82
5081 5402 2.557490 GTCTCCTGCCGGGTTATAGTAG 59.443 54.545 2.18 0.00 36.25 2.57
5090 5411 1.002134 AAATGTGTCTCCTGCCGGG 60.002 57.895 2.18 0.00 0.00 5.73
5115 5436 7.094634 TGCTACTAGCTTTTTGAAAATGAGAGG 60.095 37.037 9.49 0.00 42.97 3.69
5128 5461 7.703058 AACCATAAATGTGCTACTAGCTTTT 57.297 32.000 9.49 8.80 42.97 2.27
5129 5462 8.980481 ATAACCATAAATGTGCTACTAGCTTT 57.020 30.769 9.49 4.67 42.97 3.51
5158 5491 5.476614 ACTTTGGAACGGACAGAGTAATAC 58.523 41.667 0.00 0.00 32.28 1.89
5161 5494 5.069516 ACTTACTTTGGAACGGACAGAGTAA 59.930 40.000 14.19 14.19 40.81 2.24
5167 5500 3.551454 CGAGACTTACTTTGGAACGGACA 60.551 47.826 0.00 0.00 0.00 4.02
5168 5501 2.985139 CGAGACTTACTTTGGAACGGAC 59.015 50.000 0.00 0.00 0.00 4.79
5169 5502 2.624838 ACGAGACTTACTTTGGAACGGA 59.375 45.455 0.00 0.00 0.00 4.69
5180 5513 5.164022 CGTTCCAAAATACCACGAGACTTAC 60.164 44.000 0.00 0.00 32.51 2.34
5188 5521 1.735571 CCTCCGTTCCAAAATACCACG 59.264 52.381 0.00 0.00 0.00 4.94
5220 5629 4.040095 AGGCCGAGACCATTAACCTTATAC 59.960 45.833 0.00 0.00 0.00 1.47
5253 5662 3.788797 GCAAACCTGACAGACTTGTTTCG 60.789 47.826 3.32 3.03 37.76 3.46
5267 5676 6.016276 ACACTTTTACCTAAGATGCAAACCTG 60.016 38.462 0.00 0.00 0.00 4.00
5289 5698 0.460284 CATGCTACCTGACGGGACAC 60.460 60.000 7.51 0.00 38.76 3.67
5296 5705 1.452108 GTGGGGCATGCTACCTGAC 60.452 63.158 25.15 15.98 0.00 3.51
5351 5763 4.931601 GGGGAAAATGTCAATTCTTTGAGC 59.068 41.667 2.80 0.00 42.41 4.26
5355 5767 7.457535 TGAATAGGGGGAAAATGTCAATTCTTT 59.542 33.333 0.00 0.00 0.00 2.52
5371 5783 2.843113 GAGAGGATGGATGAATAGGGGG 59.157 54.545 0.00 0.00 0.00 5.40
5378 5790 7.199167 TGTCTAATTTGAGAGGATGGATGAA 57.801 36.000 0.00 0.00 0.00 2.57
5405 5817 4.837896 AAACTAAGCCAAAGAACAGAGC 57.162 40.909 0.00 0.00 0.00 4.09
5418 5830 8.718734 ACAACAGTATAGCACTAAAAACTAAGC 58.281 33.333 0.00 0.00 34.98 3.09
5532 5945 7.668525 AACTAACAACAACAATACTCTAGGC 57.331 36.000 0.00 0.00 0.00 3.93
5560 5974 1.223487 CCGTTCCCCATCCATCGTT 59.777 57.895 0.00 0.00 0.00 3.85
5598 6012 1.205655 TGGTCCAGCAGAATTCTCTCG 59.794 52.381 4.57 0.00 0.00 4.04
5667 6081 2.295885 AGATACAAGATGCAAGCTGCC 58.704 47.619 0.00 0.00 44.23 4.85
5700 6114 5.106277 TGAGTGACGGACAGTAAGATTACAG 60.106 44.000 5.59 0.06 36.12 2.74
5710 6124 1.068741 GTCCTTTGAGTGACGGACAGT 59.931 52.381 0.00 0.00 44.11 3.55
5711 6125 1.784525 GTCCTTTGAGTGACGGACAG 58.215 55.000 0.00 0.00 44.11 3.51
5730 6144 3.251004 GCGCAAATAAGTCCCTAAGGATG 59.749 47.826 0.30 0.00 46.41 3.51
5844 6259 9.408069 GGATCGATTAAATAACGTTAGAGTCAT 57.592 33.333 14.25 2.26 0.00 3.06
5845 6260 7.864379 GGGATCGATTAAATAACGTTAGAGTCA 59.136 37.037 14.25 0.00 0.00 3.41
5846 6261 8.081025 AGGGATCGATTAAATAACGTTAGAGTC 58.919 37.037 14.25 7.03 0.00 3.36
5847 6262 7.949434 AGGGATCGATTAAATAACGTTAGAGT 58.051 34.615 14.25 4.02 0.00 3.24
5850 6265 8.700644 CAGAAGGGATCGATTAAATAACGTTAG 58.299 37.037 14.25 0.00 0.00 2.34
5933 6348 2.911484 GGGAGTACCTCTTTGATGCAG 58.089 52.381 0.00 0.00 35.85 4.41
5949 6364 2.834638 ACATTTTGGGATGGAGGGAG 57.165 50.000 0.00 0.00 0.00 4.30
5950 6365 3.855599 TCTTACATTTTGGGATGGAGGGA 59.144 43.478 0.00 0.00 0.00 4.20
5951 6366 4.249638 TCTTACATTTTGGGATGGAGGG 57.750 45.455 0.00 0.00 0.00 4.30
5952 6367 5.448654 TGATCTTACATTTTGGGATGGAGG 58.551 41.667 0.00 0.00 0.00 4.30
5953 6368 7.592885 AATGATCTTACATTTTGGGATGGAG 57.407 36.000 0.00 0.00 37.20 3.86
5954 6369 7.976414 AAATGATCTTACATTTTGGGATGGA 57.024 32.000 0.00 0.00 44.63 3.41
5984 6399 5.869579 AGACCATGTTTGACACTATTCAGT 58.130 37.500 0.00 0.00 34.42 3.41
5985 6400 6.808008 AAGACCATGTTTGACACTATTCAG 57.192 37.500 0.00 0.00 0.00 3.02
5986 6401 7.220740 TGTAAGACCATGTTTGACACTATTCA 58.779 34.615 0.00 0.00 0.00 2.57
5987 6402 7.667043 TGTAAGACCATGTTTGACACTATTC 57.333 36.000 0.00 0.00 0.00 1.75
5988 6403 8.635765 AATGTAAGACCATGTTTGACACTATT 57.364 30.769 0.00 0.00 0.00 1.73
5989 6404 8.635765 AAATGTAAGACCATGTTTGACACTAT 57.364 30.769 0.00 0.00 0.00 2.12
5990 6405 8.349245 CAAAATGTAAGACCATGTTTGACACTA 58.651 33.333 0.00 0.00 31.67 2.74
5991 6406 6.959639 AAATGTAAGACCATGTTTGACACT 57.040 33.333 0.00 0.00 0.00 3.55
5992 6407 6.420604 CCAAAATGTAAGACCATGTTTGACAC 59.579 38.462 0.00 0.00 31.67 3.67
5993 6408 6.462207 CCCAAAATGTAAGACCATGTTTGACA 60.462 38.462 0.00 0.00 31.67 3.58
5994 6409 5.925969 CCCAAAATGTAAGACCATGTTTGAC 59.074 40.000 0.00 0.00 31.67 3.18
5995 6410 5.835819 TCCCAAAATGTAAGACCATGTTTGA 59.164 36.000 0.00 0.00 31.67 2.69
5996 6411 6.095432 TCCCAAAATGTAAGACCATGTTTG 57.905 37.500 0.00 0.00 0.00 2.93
5997 6412 6.295802 CCATCCCAAAATGTAAGACCATGTTT 60.296 38.462 0.00 0.00 0.00 2.83
5998 6413 5.187576 CCATCCCAAAATGTAAGACCATGTT 59.812 40.000 0.00 0.00 0.00 2.71
5999 6414 4.711355 CCATCCCAAAATGTAAGACCATGT 59.289 41.667 0.00 0.00 0.00 3.21
6000 6415 4.955450 TCCATCCCAAAATGTAAGACCATG 59.045 41.667 0.00 0.00 0.00 3.66
6001 6416 5.203528 CTCCATCCCAAAATGTAAGACCAT 58.796 41.667 0.00 0.00 0.00 3.55
6002 6417 4.569653 CCTCCATCCCAAAATGTAAGACCA 60.570 45.833 0.00 0.00 0.00 4.02
6003 6418 3.954258 CCTCCATCCCAAAATGTAAGACC 59.046 47.826 0.00 0.00 0.00 3.85
6004 6419 3.954258 CCCTCCATCCCAAAATGTAAGAC 59.046 47.826 0.00 0.00 0.00 3.01
6005 6420 3.052944 CCCCTCCATCCCAAAATGTAAGA 60.053 47.826 0.00 0.00 0.00 2.10
6006 6421 3.299503 CCCCTCCATCCCAAAATGTAAG 58.700 50.000 0.00 0.00 0.00 2.34
6007 6422 2.657459 ACCCCTCCATCCCAAAATGTAA 59.343 45.455 0.00 0.00 0.00 2.41
6008 6423 2.293246 ACCCCTCCATCCCAAAATGTA 58.707 47.619 0.00 0.00 0.00 2.29
6009 6424 1.092549 ACCCCTCCATCCCAAAATGT 58.907 50.000 0.00 0.00 0.00 2.71
6010 6425 2.424812 CCTACCCCTCCATCCCAAAATG 60.425 54.545 0.00 0.00 0.00 2.32
6011 6426 1.859574 CCTACCCCTCCATCCCAAAAT 59.140 52.381 0.00 0.00 0.00 1.82
6012 6427 1.203635 TCCTACCCCTCCATCCCAAAA 60.204 52.381 0.00 0.00 0.00 2.44
6013 6428 0.423956 TCCTACCCCTCCATCCCAAA 59.576 55.000 0.00 0.00 0.00 3.28
6014 6429 0.423956 TTCCTACCCCTCCATCCCAA 59.576 55.000 0.00 0.00 0.00 4.12
6015 6430 0.423956 TTTCCTACCCCTCCATCCCA 59.576 55.000 0.00 0.00 0.00 4.37
6016 6431 0.844660 GTTTCCTACCCCTCCATCCC 59.155 60.000 0.00 0.00 0.00 3.85
6017 6432 1.894699 AGTTTCCTACCCCTCCATCC 58.105 55.000 0.00 0.00 0.00 3.51
6018 6433 3.244596 GCATAGTTTCCTACCCCTCCATC 60.245 52.174 0.00 0.00 0.00 3.51
6019 6434 2.711547 GCATAGTTTCCTACCCCTCCAT 59.288 50.000 0.00 0.00 0.00 3.41
6020 6435 2.124411 GCATAGTTTCCTACCCCTCCA 58.876 52.381 0.00 0.00 0.00 3.86
6021 6436 2.409570 AGCATAGTTTCCTACCCCTCC 58.590 52.381 0.00 0.00 0.00 4.30
6022 6437 4.654724 ACTAAGCATAGTTTCCTACCCCTC 59.345 45.833 0.00 0.00 39.36 4.30
6023 6438 4.632292 ACTAAGCATAGTTTCCTACCCCT 58.368 43.478 0.00 0.00 39.36 4.79
6024 6439 6.042897 ACATACTAAGCATAGTTTCCTACCCC 59.957 42.308 6.97 0.00 42.39 4.95
6025 6440 7.063934 ACATACTAAGCATAGTTTCCTACCC 57.936 40.000 6.97 0.00 42.39 3.69
6026 6441 7.985752 ACAACATACTAAGCATAGTTTCCTACC 59.014 37.037 6.97 0.00 42.39 3.18
6027 6442 8.943909 ACAACATACTAAGCATAGTTTCCTAC 57.056 34.615 6.97 0.00 42.39 3.18
6053 6468 9.072375 TGTATCAGACATCAACAAAAACCAATA 57.928 29.630 0.00 0.00 31.20 1.90
6127 6542 6.238049 GCAGCAATACAATGAACAAAACACAA 60.238 34.615 0.00 0.00 0.00 3.33
6132 6547 4.040217 AGGGCAGCAATACAATGAACAAAA 59.960 37.500 0.00 0.00 0.00 2.44
6134 6549 3.164268 AGGGCAGCAATACAATGAACAA 58.836 40.909 0.00 0.00 0.00 2.83
6216 6631 1.459592 GTAGTGTGTTACTGCAAGCGG 59.540 52.381 0.00 0.00 41.16 5.52
6240 6655 6.127026 GCTCAGGGTAATTCTCCTCTTAAAGA 60.127 42.308 0.00 0.00 0.00 2.52
6241 6656 6.052360 GCTCAGGGTAATTCTCCTCTTAAAG 58.948 44.000 0.00 0.00 0.00 1.85
6251 6782 2.170187 CTCTGCTGCTCAGGGTAATTCT 59.830 50.000 0.00 0.00 43.06 2.40
6382 6913 8.620416 GCATGTTTAATGGATAATCAGTGTACA 58.380 33.333 0.00 0.00 29.21 2.90
6392 6923 8.420222 CAGGGTAATTGCATGTTTAATGGATAA 58.580 33.333 0.00 0.00 0.00 1.75
6413 6944 4.080526 GTCCTTCATTATGTACACCAGGGT 60.081 45.833 0.00 0.00 0.00 4.34
6414 6945 4.451900 GTCCTTCATTATGTACACCAGGG 58.548 47.826 0.00 0.00 0.00 4.45
6434 6965 0.893727 ACGCAAGAAACCCATGGGTC 60.894 55.000 36.60 24.54 45.41 4.46
6456 6987 8.127327 AGAACATTTATCAAGCATCTCATTTCG 58.873 33.333 0.00 0.00 0.00 3.46
6483 7014 6.096141 TCACATACAACCAAAGAGCAAAAAGA 59.904 34.615 0.00 0.00 0.00 2.52
6484 7015 6.272318 TCACATACAACCAAAGAGCAAAAAG 58.728 36.000 0.00 0.00 0.00 2.27
6487 7018 5.769662 AGATCACATACAACCAAAGAGCAAA 59.230 36.000 0.00 0.00 0.00 3.68
6521 7052 6.426937 GCTGAAGATAAACACCTAAACAGTGA 59.573 38.462 0.00 0.00 38.63 3.41
6523 7054 6.204882 GTGCTGAAGATAAACACCTAAACAGT 59.795 38.462 0.00 0.00 0.00 3.55
6524 7055 6.428159 AGTGCTGAAGATAAACACCTAAACAG 59.572 38.462 0.00 0.00 31.58 3.16
6525 7056 6.296026 AGTGCTGAAGATAAACACCTAAACA 58.704 36.000 0.00 0.00 31.58 2.83
6526 7057 6.803154 AGTGCTGAAGATAAACACCTAAAC 57.197 37.500 0.00 0.00 31.58 2.01
6529 7060 9.595823 GTTAATAGTGCTGAAGATAAACACCTA 57.404 33.333 0.00 0.00 31.58 3.08
6530 7061 8.322091 AGTTAATAGTGCTGAAGATAAACACCT 58.678 33.333 0.00 0.00 31.58 4.00
6531 7062 8.391106 CAGTTAATAGTGCTGAAGATAAACACC 58.609 37.037 0.00 0.00 32.39 4.16
6532 7063 8.391106 CCAGTTAATAGTGCTGAAGATAAACAC 58.609 37.037 0.00 0.00 32.39 3.32
6533 7064 8.100791 ACCAGTTAATAGTGCTGAAGATAAACA 58.899 33.333 0.00 0.00 32.39 2.83
6652 7186 6.252599 AGGGTAGTTGCAGAATTATCATCA 57.747 37.500 0.00 0.00 0.00 3.07
6804 7341 1.338579 CCTTCTCTGACTTCACTGGCC 60.339 57.143 0.00 0.00 0.00 5.36
6805 7342 1.943507 GCCTTCTCTGACTTCACTGGC 60.944 57.143 0.00 0.00 0.00 4.85
6875 7412 4.412796 TTTCTCCTGAATCATCATCGCT 57.587 40.909 0.00 0.00 34.37 4.93
6892 7429 8.010733 TCTCTGTTTTGTTTGATGGATTTTCT 57.989 30.769 0.00 0.00 0.00 2.52
6898 7435 7.147759 TGGATTTTCTCTGTTTTGTTTGATGGA 60.148 33.333 0.00 0.00 0.00 3.41
6917 7454 8.691661 ACTACTGTACTTGTTTGATGGATTTT 57.308 30.769 0.00 0.00 0.00 1.82
6920 7457 9.436957 CTTAACTACTGTACTTGTTTGATGGAT 57.563 33.333 0.00 0.00 0.00 3.41
6921 7458 7.876068 CCTTAACTACTGTACTTGTTTGATGGA 59.124 37.037 0.00 0.00 0.00 3.41
6925 7462 8.644216 TCATCCTTAACTACTGTACTTGTTTGA 58.356 33.333 0.00 0.00 0.00 2.69
6928 7465 7.876582 GGTTCATCCTTAACTACTGTACTTGTT 59.123 37.037 0.00 0.00 0.00 2.83
6929 7466 7.234988 AGGTTCATCCTTAACTACTGTACTTGT 59.765 37.037 0.00 0.00 45.67 3.16
6947 7508 5.123979 GTGGATCCAAAGTAACAGGTTCATC 59.876 44.000 18.20 0.00 0.00 2.92
6988 7549 7.764443 CCGTCTTCTTTCTTAATACCTTCATCA 59.236 37.037 0.00 0.00 0.00 3.07
7055 7616 4.813809 TCCTCTATCTTCCTCTTGATGCT 58.186 43.478 0.00 0.00 0.00 3.79
7131 7692 0.324943 CTCCTTTTTCCTCGCAGGGA 59.675 55.000 2.86 0.00 35.59 4.20
7342 7954 0.529119 GCATGCAGTATTGGCCAAGC 60.529 55.000 24.94 21.10 0.00 4.01
7343 7955 0.818938 TGCATGCAGTATTGGCCAAG 59.181 50.000 24.94 11.28 0.00 3.61
7360 7972 1.532868 CATTCCTAACTGGCGCTATGC 59.467 52.381 7.64 0.00 45.38 3.14
7361 7973 2.838736 ACATTCCTAACTGGCGCTATG 58.161 47.619 7.64 0.00 35.26 2.23
7362 7974 3.206150 CAACATTCCTAACTGGCGCTAT 58.794 45.455 7.64 0.00 35.26 2.97
7363 7975 2.627945 CAACATTCCTAACTGGCGCTA 58.372 47.619 7.64 0.00 35.26 4.26
7364 7976 1.453155 CAACATTCCTAACTGGCGCT 58.547 50.000 7.64 0.00 35.26 5.92
7365 7977 0.451783 CCAACATTCCTAACTGGCGC 59.548 55.000 0.00 0.00 35.26 6.53
7366 7978 1.094785 CCCAACATTCCTAACTGGCG 58.905 55.000 0.00 0.00 35.26 5.69
7367 7979 2.507407 TCCCAACATTCCTAACTGGC 57.493 50.000 0.00 0.00 35.26 4.85
7368 7980 6.187682 ACTAATTCCCAACATTCCTAACTGG 58.812 40.000 0.00 0.00 37.10 4.00
7369 7981 7.393234 TGAACTAATTCCCAACATTCCTAACTG 59.607 37.037 0.00 0.00 33.49 3.16
7370 7982 7.466804 TGAACTAATTCCCAACATTCCTAACT 58.533 34.615 0.00 0.00 33.49 2.24
7371 7983 7.610305 TCTGAACTAATTCCCAACATTCCTAAC 59.390 37.037 0.00 0.00 33.49 2.34
7372 7984 7.695055 TCTGAACTAATTCCCAACATTCCTAA 58.305 34.615 0.00 0.00 33.49 2.69
7373 7985 7.265599 TCTGAACTAATTCCCAACATTCCTA 57.734 36.000 0.00 0.00 33.49 2.94
7374 7986 6.139679 TCTGAACTAATTCCCAACATTCCT 57.860 37.500 0.00 0.00 33.49 3.36
7375 7987 6.434340 ACTTCTGAACTAATTCCCAACATTCC 59.566 38.462 0.00 0.00 33.49 3.01
7376 7988 7.454260 ACTTCTGAACTAATTCCCAACATTC 57.546 36.000 0.00 0.00 33.49 2.67
7377 7989 7.287696 ACAACTTCTGAACTAATTCCCAACATT 59.712 33.333 0.00 0.00 33.49 2.71
7378 7990 6.777580 ACAACTTCTGAACTAATTCCCAACAT 59.222 34.615 0.00 0.00 33.49 2.71
7379 7991 6.039270 CACAACTTCTGAACTAATTCCCAACA 59.961 38.462 0.00 0.00 33.49 3.33
7380 7992 6.438763 CACAACTTCTGAACTAATTCCCAAC 58.561 40.000 0.00 0.00 33.49 3.77
7381 7993 5.534654 CCACAACTTCTGAACTAATTCCCAA 59.465 40.000 0.00 0.00 33.49 4.12
7382 7994 5.070001 CCACAACTTCTGAACTAATTCCCA 58.930 41.667 0.00 0.00 33.49 4.37
7383 7995 5.070685 ACCACAACTTCTGAACTAATTCCC 58.929 41.667 0.00 0.00 33.49 3.97
7384 7996 6.635030 AACCACAACTTCTGAACTAATTCC 57.365 37.500 0.00 0.00 33.49 3.01
7385 7997 7.973944 ACAAAACCACAACTTCTGAACTAATTC 59.026 33.333 0.00 0.00 35.18 2.17
7386 7998 7.759433 CACAAAACCACAACTTCTGAACTAATT 59.241 33.333 0.00 0.00 0.00 1.40
7387 7999 7.093945 ACACAAAACCACAACTTCTGAACTAAT 60.094 33.333 0.00 0.00 0.00 1.73
7388 8000 6.207810 ACACAAAACCACAACTTCTGAACTAA 59.792 34.615 0.00 0.00 0.00 2.24
7389 8001 5.708230 ACACAAAACCACAACTTCTGAACTA 59.292 36.000 0.00 0.00 0.00 2.24
7390 8002 4.522789 ACACAAAACCACAACTTCTGAACT 59.477 37.500 0.00 0.00 0.00 3.01
7391 8003 4.805219 ACACAAAACCACAACTTCTGAAC 58.195 39.130 0.00 0.00 0.00 3.18
7392 8004 5.461032 AACACAAAACCACAACTTCTGAA 57.539 34.783 0.00 0.00 0.00 3.02
7393 8005 5.473846 TGTAACACAAAACCACAACTTCTGA 59.526 36.000 0.00 0.00 0.00 3.27
7394 8006 5.704888 TGTAACACAAAACCACAACTTCTG 58.295 37.500 0.00 0.00 0.00 3.02
7395 8007 5.968528 TGTAACACAAAACCACAACTTCT 57.031 34.783 0.00 0.00 0.00 2.85
7465 8077 1.331214 AGTTGTGGGCTCAATGTTGG 58.669 50.000 0.00 0.00 0.00 3.77
7480 8092 9.347934 CTACTACAAGAAGTTGACTGATAGTTG 57.652 37.037 0.00 0.00 37.10 3.16
7482 8094 8.732531 GTCTACTACAAGAAGTTGACTGATAGT 58.267 37.037 10.11 0.00 44.04 2.12
7500 8112 7.196331 GCCCAATCAATCAAATTGTCTACTAC 58.804 38.462 0.00 0.00 41.02 2.73
7652 8264 1.178276 TTGACAAACCCAACAACGCT 58.822 45.000 0.00 0.00 0.00 5.07
7654 8266 4.267452 CAGAATTTGACAAACCCAACAACG 59.733 41.667 1.94 0.00 0.00 4.10
7668 8281 2.777094 TCGTCATGTGGCAGAATTTGA 58.223 42.857 0.00 0.00 0.00 2.69
7669 8282 3.127376 TGATCGTCATGTGGCAGAATTTG 59.873 43.478 0.00 0.00 0.00 2.32
7713 8328 0.605319 CTTTGCGGCACTAGGAACCA 60.605 55.000 0.05 0.00 0.00 3.67
7758 8373 4.446371 GAGATCATTTGGAACTCCATCGT 58.554 43.478 0.00 0.00 46.97 3.73
7819 8435 1.883638 GCCACCTGATGCTTCTTCACA 60.884 52.381 0.88 0.00 0.00 3.58
7822 8438 1.093159 CTGCCACCTGATGCTTCTTC 58.907 55.000 0.88 0.00 0.00 2.87
7823 8439 0.964358 GCTGCCACCTGATGCTTCTT 60.964 55.000 0.88 0.00 0.00 2.52
7824 8440 1.378250 GCTGCCACCTGATGCTTCT 60.378 57.895 0.88 0.00 0.00 2.85
7883 8500 2.897207 CCATAGTCCGAACGGGCA 59.103 61.111 19.62 6.54 43.56 5.36
7920 8537 3.571590 CAGGGCCTCTCTGTCTAGTTAT 58.428 50.000 0.95 0.00 0.00 1.89
7921 8538 2.358300 CCAGGGCCTCTCTGTCTAGTTA 60.358 54.545 0.95 0.00 0.00 2.24
7961 8578 0.388134 CCTTGTACTCCACGGTCGTG 60.388 60.000 15.62 15.62 45.02 4.35
8106 8723 2.116238 GCTTCTACACCATCTACCCCA 58.884 52.381 0.00 0.00 0.00 4.96
8118 8735 1.605457 CGTTCACCTGCAGCTTCTACA 60.605 52.381 8.66 0.00 0.00 2.74
8146 8763 3.770666 CATACAACATCGTCGTCTCCTT 58.229 45.455 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.