Multiple sequence alignment - TraesCS6D01G127500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G127500 chr6D 100.000 4597 0 0 1 4597 91077882 91082478 0.000000e+00 8490.0
1 TraesCS6D01G127500 chr6B 96.135 2303 57 15 2304 4597 174971137 174973416 0.000000e+00 3731.0
2 TraesCS6D01G127500 chr6B 94.062 2307 83 21 27 2307 174968808 174971086 0.000000e+00 3452.0
3 TraesCS6D01G127500 chr6B 100.000 38 0 0 6 43 174968627 174968664 2.290000e-08 71.3
4 TraesCS6D01G127500 chr6A 94.118 2346 79 20 10 2307 109492485 109494819 0.000000e+00 3513.0
5 TraesCS6D01G127500 chr6A 96.671 1562 32 10 2309 3862 109494881 109496430 0.000000e+00 2579.0
6 TraesCS6D01G127500 chr6A 89.262 596 33 20 3914 4492 109497215 109497796 0.000000e+00 717.0
7 TraesCS6D01G127500 chr6A 98.214 56 1 0 3861 3916 109496855 109496910 1.050000e-16 99.0
8 TraesCS6D01G127500 chr6A 87.500 64 5 2 4434 4494 1984271 1984334 2.290000e-08 71.3
9 TraesCS6D01G127500 chr5D 86.207 87 12 0 4457 4543 80190142 80190228 1.360000e-15 95.3
10 TraesCS6D01G127500 chr5D 85.185 81 10 2 4467 4546 515274476 515274397 1.060000e-11 82.4
11 TraesCS6D01G127500 chr5B 86.047 86 12 0 4458 4543 491865684 491865599 4.900000e-15 93.5
12 TraesCS6D01G127500 chr4A 81.000 100 19 0 4444 4543 109444949 109444850 3.810000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G127500 chr6D 91077882 91082478 4596 False 8490.0 8490 100.000000 1 4597 1 chr6D.!!$F1 4596
1 TraesCS6D01G127500 chr6B 174968627 174973416 4789 False 2418.1 3731 96.732333 6 4597 3 chr6B.!!$F1 4591
2 TraesCS6D01G127500 chr6A 109492485 109497796 5311 False 1727.0 3513 94.566250 10 4492 4 chr6A.!!$F2 4482

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
969 1199 0.306533 TCTTTGTTCGCCGTTTCAGC 59.693 50.000 0.00 0.0 0.00 4.26 F
1074 1304 0.034896 ATGCCGTCGGGTATGATTCC 59.965 55.000 14.38 0.0 37.24 3.01 F
1580 1814 0.694771 AGCTTCAGTCCTCCAATGCA 59.305 50.000 0.00 0.0 0.00 3.96 F
1899 2135 3.134458 ACAGTGCTGACTTTGCTACTTC 58.866 45.455 6.17 0.0 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2461 2757 1.799544 CAGCAGCACACACTGACATA 58.200 50.000 0.0 0.00 40.25 2.29 R
2663 2962 4.444876 CCCCTGTATCAGTGGATGTAAAGG 60.445 50.000 0.0 0.00 30.54 3.11 R
3159 3460 6.147164 CACATTAATTACAGAACAGGTCACGT 59.853 38.462 0.0 0.00 0.00 4.49 R
3636 3940 4.799419 AACAATTGCAACAAATGAGTGC 57.201 36.364 0.0 6.82 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 210 4.098914 ACATTTCAGGCAAAGTAGGTCA 57.901 40.909 0.00 0.00 0.00 4.02
116 286 1.603455 CAAGCCCCAGGAGCGAAAA 60.603 57.895 0.00 0.00 34.64 2.29
123 293 1.000274 CCCAGGAGCGAAAACCAAAAG 60.000 52.381 0.00 0.00 0.00 2.27
124 294 1.681264 CCAGGAGCGAAAACCAAAAGT 59.319 47.619 0.00 0.00 0.00 2.66
125 295 2.287608 CCAGGAGCGAAAACCAAAAGTC 60.288 50.000 0.00 0.00 0.00 3.01
126 296 1.954382 AGGAGCGAAAACCAAAAGTCC 59.046 47.619 0.00 0.00 0.00 3.85
127 297 1.000607 GGAGCGAAAACCAAAAGTCCC 60.001 52.381 0.00 0.00 0.00 4.46
128 298 1.679153 GAGCGAAAACCAAAAGTCCCA 59.321 47.619 0.00 0.00 0.00 4.37
129 299 2.100087 GAGCGAAAACCAAAAGTCCCAA 59.900 45.455 0.00 0.00 0.00 4.12
130 300 2.498078 AGCGAAAACCAAAAGTCCCAAA 59.502 40.909 0.00 0.00 0.00 3.28
131 301 3.055747 AGCGAAAACCAAAAGTCCCAAAA 60.056 39.130 0.00 0.00 0.00 2.44
226 405 1.202722 TCCCGTCGCCTTCTTTCTTTT 60.203 47.619 0.00 0.00 0.00 2.27
245 424 2.727392 CCATTCCGTACCTCGCCCA 61.727 63.158 0.00 0.00 38.35 5.36
256 435 2.365582 ACCTCGCCCATTTTCATACAC 58.634 47.619 0.00 0.00 0.00 2.90
261 440 2.683742 CGCCCATTTTCATACACCTCCT 60.684 50.000 0.00 0.00 0.00 3.69
267 446 1.200519 TTCATACACCTCCTTCCCCG 58.799 55.000 0.00 0.00 0.00 5.73
349 548 2.277404 GCCGACTCCTCCTCCTCT 59.723 66.667 0.00 0.00 0.00 3.69
455 665 1.594293 CCTCGCGAGGTTTGTGTGT 60.594 57.895 40.77 0.00 43.61 3.72
463 673 0.525761 AGGTTTGTGTGTGTGTGTGC 59.474 50.000 0.00 0.00 0.00 4.57
584 796 2.167662 GTGGGATTGGTTCGAATTGGT 58.832 47.619 0.00 0.00 0.00 3.67
616 828 2.589157 TAGTTGGCGAGTGGGTGGG 61.589 63.158 0.00 0.00 0.00 4.61
739 955 2.809174 CAGATCACGCGTCCGCAA 60.809 61.111 9.86 0.00 42.06 4.85
741 957 2.167219 AGATCACGCGTCCGCAATG 61.167 57.895 9.86 9.27 42.06 2.82
785 1001 0.908910 ACGATGTCAACCTGGGCATA 59.091 50.000 0.00 0.00 0.00 3.14
821 1037 5.333339 CCAAGTGAAAATGTACACTGTCTCG 60.333 44.000 0.00 0.00 44.94 4.04
822 1038 5.196341 AGTGAAAATGTACACTGTCTCGA 57.804 39.130 0.00 0.00 44.18 4.04
823 1039 5.223382 AGTGAAAATGTACACTGTCTCGAG 58.777 41.667 5.93 5.93 44.18 4.04
824 1040 4.982916 GTGAAAATGTACACTGTCTCGAGT 59.017 41.667 13.13 0.00 34.65 4.18
825 1041 6.016527 AGTGAAAATGTACACTGTCTCGAGTA 60.017 38.462 13.13 2.08 44.18 2.59
826 1042 6.305877 GTGAAAATGTACACTGTCTCGAGTAG 59.694 42.308 13.13 14.18 34.65 2.57
827 1043 5.961396 AAATGTACACTGTCTCGAGTAGT 57.039 39.130 13.13 14.82 0.00 2.73
828 1044 7.173735 TGAAAATGTACACTGTCTCGAGTAGTA 59.826 37.037 19.47 11.08 0.00 1.82
829 1045 6.665474 AATGTACACTGTCTCGAGTAGTAG 57.335 41.667 19.47 16.36 0.00 2.57
830 1046 5.144692 TGTACACTGTCTCGAGTAGTAGT 57.855 43.478 19.47 19.51 0.00 2.73
831 1047 6.272822 TGTACACTGTCTCGAGTAGTAGTA 57.727 41.667 19.47 18.83 0.00 1.82
832 1048 6.871844 TGTACACTGTCTCGAGTAGTAGTAT 58.128 40.000 19.47 9.72 0.00 2.12
833 1049 6.755607 TGTACACTGTCTCGAGTAGTAGTATG 59.244 42.308 19.47 12.25 0.00 2.39
836 1052 5.237561 CACTGTCTCGAGTAGTAGTATGCAT 59.762 44.000 19.47 3.79 0.00 3.96
959 1189 3.473367 CGCAGTTCTGAATCTTTGTTCG 58.527 45.455 3.84 0.00 0.00 3.95
969 1199 0.306533 TCTTTGTTCGCCGTTTCAGC 59.693 50.000 0.00 0.00 0.00 4.26
1026 1256 1.140816 GCGTTGTTGTGAGGAGAGTC 58.859 55.000 0.00 0.00 0.00 3.36
1035 1265 2.225369 TGTGAGGAGAGTCATCCCTTCA 60.225 50.000 0.00 0.00 40.53 3.02
1074 1304 0.034896 ATGCCGTCGGGTATGATTCC 59.965 55.000 14.38 0.00 37.24 3.01
1552 1786 9.379791 CTTAACAAGTACCCTAGATCGATTTTT 57.620 33.333 0.00 0.00 0.00 1.94
1580 1814 0.694771 AGCTTCAGTCCTCCAATGCA 59.305 50.000 0.00 0.00 0.00 3.96
1856 2092 5.244785 TGGACTGTACGTGTTATCTCATC 57.755 43.478 0.00 0.00 0.00 2.92
1899 2135 3.134458 ACAGTGCTGACTTTGCTACTTC 58.866 45.455 6.17 0.00 0.00 3.01
1908 2144 6.374417 TGACTTTGCTACTTCTTATTCCCT 57.626 37.500 0.00 0.00 0.00 4.20
2200 2436 7.448469 CCCAAGAGAAAAACATAATATCGGGAT 59.552 37.037 0.00 0.00 0.00 3.85
2300 2536 9.697990 GCCTCCATTAGTAATATACTACTACCT 57.302 37.037 0.60 0.00 40.74 3.08
2461 2757 3.257873 TGTTTGATGGCGGTTTTCATCAT 59.742 39.130 6.80 0.00 45.96 2.45
2501 2800 6.147821 TGCTGCTTAGTTCACTAATTCACTTC 59.852 38.462 0.00 0.00 37.75 3.01
2663 2962 8.774586 TGTTCAGAATCTTTTGCTAGTTCTTAC 58.225 33.333 0.00 0.00 0.00 2.34
3636 3940 1.939934 TCTTCTTCCGCTGTTGTTGTG 59.060 47.619 0.00 0.00 0.00 3.33
3674 3978 2.925724 TGTTTTCTTCTTCGGCCTGAA 58.074 42.857 0.00 5.47 34.74 3.02
3940 4978 5.656480 TGTGCGATACTGAAATGCTACTTA 58.344 37.500 0.00 0.00 0.00 2.24
3941 4979 5.518847 TGTGCGATACTGAAATGCTACTTAC 59.481 40.000 0.00 0.00 0.00 2.34
3942 4980 5.749109 GTGCGATACTGAAATGCTACTTACT 59.251 40.000 0.00 0.00 0.00 2.24
3943 4981 6.255887 GTGCGATACTGAAATGCTACTTACTT 59.744 38.462 0.00 0.00 0.00 2.24
3944 4982 6.475727 TGCGATACTGAAATGCTACTTACTTC 59.524 38.462 0.00 0.00 0.00 3.01
3945 4983 6.697892 GCGATACTGAAATGCTACTTACTTCT 59.302 38.462 0.00 0.00 0.00 2.85
3946 4984 7.096394 GCGATACTGAAATGCTACTTACTTCTC 60.096 40.741 0.00 0.00 0.00 2.87
3947 4985 8.132362 CGATACTGAAATGCTACTTACTTCTCT 58.868 37.037 0.00 0.00 0.00 3.10
3955 4993 9.998106 AAATGCTACTTACTTCTCTAAGTTTGA 57.002 29.630 0.00 0.00 43.60 2.69
3988 5026 1.612146 TGTGAGATGCCTTCGGGGA 60.612 57.895 0.00 0.00 40.50 4.81
4179 5219 5.037385 GGTGAGAAAAACACTTCTTTCTGC 58.963 41.667 1.98 0.00 40.98 4.26
4180 5220 5.393027 GGTGAGAAAAACACTTCTTTCTGCA 60.393 40.000 1.98 0.00 40.98 4.41
4267 5313 4.020307 TGAGATGTATGACTGTGCTTTCCA 60.020 41.667 0.00 0.00 0.00 3.53
4273 5319 7.517614 TGTATGACTGTGCTTTCCAAAAATA 57.482 32.000 0.00 0.00 0.00 1.40
4395 5447 4.082245 CAGCTGGGTTTCATTTTATTCGGT 60.082 41.667 5.57 0.00 0.00 4.69
4396 5448 4.526650 AGCTGGGTTTCATTTTATTCGGTT 59.473 37.500 0.00 0.00 0.00 4.44
4397 5449 5.011635 AGCTGGGTTTCATTTTATTCGGTTT 59.988 36.000 0.00 0.00 0.00 3.27
4398 5450 5.120053 GCTGGGTTTCATTTTATTCGGTTTG 59.880 40.000 0.00 0.00 0.00 2.93
4399 5451 5.542779 TGGGTTTCATTTTATTCGGTTTGG 58.457 37.500 0.00 0.00 0.00 3.28
4433 5485 5.378332 TCGGTTCAGTTTCTTTATTCCCAA 58.622 37.500 0.00 0.00 0.00 4.12
4492 5546 7.467623 ACATGCGATCTAGTTTTGAAAATCTC 58.532 34.615 0.00 0.00 0.00 2.75
4535 5589 5.468592 TGAAAATGGTTCATGATTTGGACG 58.531 37.500 0.00 0.00 34.26 4.79
4539 5593 1.465689 GGTTCATGATTTGGACGCACG 60.466 52.381 0.00 0.00 34.26 5.34
4540 5594 0.801872 TTCATGATTTGGACGCACGG 59.198 50.000 0.00 0.00 0.00 4.94
4593 5647 7.228308 TGAAATAAAGGGGAAAATGCAAAGTTG 59.772 33.333 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 210 4.704103 TCCTGCCTGGCTCGAGGT 62.704 66.667 21.03 0.00 35.29 3.85
116 286 2.146920 TCGGTTTTGGGACTTTTGGT 57.853 45.000 0.00 0.00 0.00 3.67
123 293 1.266989 CTCTGCTTTCGGTTTTGGGAC 59.733 52.381 0.00 0.00 0.00 4.46
124 294 1.604604 CTCTGCTTTCGGTTTTGGGA 58.395 50.000 0.00 0.00 0.00 4.37
125 295 0.598065 CCTCTGCTTTCGGTTTTGGG 59.402 55.000 0.00 0.00 0.00 4.12
126 296 0.039165 GCCTCTGCTTTCGGTTTTGG 60.039 55.000 0.00 0.00 33.53 3.28
127 297 0.385974 CGCCTCTGCTTTCGGTTTTG 60.386 55.000 0.00 0.00 34.43 2.44
128 298 0.818040 ACGCCTCTGCTTTCGGTTTT 60.818 50.000 0.00 0.00 34.43 2.43
129 299 1.227853 ACGCCTCTGCTTTCGGTTT 60.228 52.632 0.00 0.00 34.43 3.27
130 300 1.961277 CACGCCTCTGCTTTCGGTT 60.961 57.895 0.00 0.00 34.43 4.44
131 301 2.357517 CACGCCTCTGCTTTCGGT 60.358 61.111 0.00 0.00 34.43 4.69
226 405 2.428925 GGGCGAGGTACGGAATGGA 61.429 63.158 0.00 0.00 42.83 3.41
245 424 3.371595 CGGGGAAGGAGGTGTATGAAAAT 60.372 47.826 0.00 0.00 0.00 1.82
477 689 2.315038 GAAGCAAGCAGGCGGAATCG 62.315 60.000 0.00 0.00 39.27 3.34
520 732 1.956629 GAGGCGTCAAGGGATTCGGA 61.957 60.000 0.52 0.00 0.00 4.55
584 796 2.841215 CCAACTACCACCAAGAAACGA 58.159 47.619 0.00 0.00 0.00 3.85
616 828 2.089201 GGTACACCATAACCAGGCAAC 58.911 52.381 0.00 0.00 35.73 4.17
681 897 4.189188 CGAGGTACCACGCCCGAG 62.189 72.222 18.79 0.00 0.00 4.63
739 955 2.586425 ACAACTAACAACAGCAGGCAT 58.414 42.857 0.00 0.00 0.00 4.40
741 957 3.606153 CGTAACAACTAACAACAGCAGGC 60.606 47.826 0.00 0.00 0.00 4.85
750 966 4.609947 ACATCGTGACGTAACAACTAACA 58.390 39.130 4.40 0.00 0.00 2.41
785 1001 4.453480 TTTCACTTGGAACAGGGAGAAT 57.547 40.909 0.00 0.00 40.91 2.40
828 1044 8.908786 ACAGCAAATACATAGTAATGCATACT 57.091 30.769 0.00 6.83 46.62 2.12
900 1130 0.324614 TGCACACATCCCAATCGACT 59.675 50.000 0.00 0.00 0.00 4.18
959 1189 0.095417 GTCTGAATCGCTGAAACGGC 59.905 55.000 0.00 0.00 0.00 5.68
969 1199 1.726791 CCAGGAAACACGTCTGAATCG 59.273 52.381 2.95 0.00 0.00 3.34
1026 1256 2.227388 GCAACTGTTGTCTGAAGGGATG 59.773 50.000 20.57 0.00 0.00 3.51
1074 1304 2.279741 AGTGCAACATATACAGGTGCG 58.720 47.619 11.21 0.00 41.43 5.34
1113 1343 0.030773 GTCAGCGACCGCATCATCTA 59.969 55.000 16.97 0.00 44.88 1.98
1123 1353 1.005630 AGAAGCACAGTCAGCGACC 60.006 57.895 5.29 0.00 37.01 4.79
1530 1764 6.942976 TCAAAAATCGATCTAGGGTACTTGT 58.057 36.000 0.00 0.00 0.00 3.16
1552 1786 4.471025 TGGAGGACTGAAGCTTATCATTCA 59.529 41.667 0.00 0.00 32.36 2.57
1580 1814 6.822667 TGTGAATGATGCACAATTACTTCT 57.177 33.333 3.16 0.00 42.75 2.85
1899 2135 4.524328 ACCTTCAAGCAAACAGGGAATAAG 59.476 41.667 0.00 0.00 0.00 1.73
1908 2144 3.485394 TGCTATGACCTTCAAGCAAACA 58.515 40.909 9.26 0.00 37.48 2.83
2200 2436 8.055181 AGTCATGGCAATTTTCTTAGGATAAGA 58.945 33.333 0.00 0.00 0.00 2.10
2300 2536 8.773645 CAACAGAACACATGAACTAATTACAGA 58.226 33.333 0.00 0.00 0.00 3.41
2302 2538 8.445275 ACAACAGAACACATGAACTAATTACA 57.555 30.769 0.00 0.00 0.00 2.41
2316 2612 3.758300 CACCACAAGAACAACAGAACAC 58.242 45.455 0.00 0.00 0.00 3.32
2461 2757 1.799544 CAGCAGCACACACTGACATA 58.200 50.000 0.00 0.00 40.25 2.29
2501 2800 7.156876 TCTATGGCACCTTTACAATGAAAAG 57.843 36.000 0.00 0.00 34.40 2.27
2507 2806 6.719370 TGAAAGTTCTATGGCACCTTTACAAT 59.281 34.615 0.00 0.00 0.00 2.71
2663 2962 4.444876 CCCCTGTATCAGTGGATGTAAAGG 60.445 50.000 0.00 0.00 30.54 3.11
3159 3460 6.147164 CACATTAATTACAGAACAGGTCACGT 59.853 38.462 0.00 0.00 0.00 4.49
3324 3625 9.796120 CAAAGTCAGTAACATTTCTACCAAAAA 57.204 29.630 0.00 0.00 0.00 1.94
3636 3940 4.799419 AACAATTGCAACAAATGAGTGC 57.201 36.364 0.00 6.82 0.00 4.40
3886 4617 4.842531 TGAGATAGTCCATGCCAAAAGA 57.157 40.909 0.00 0.00 0.00 2.52
3940 4978 6.873076 CAGAAGAGCATCAAACTTAGAGAAGT 59.127 38.462 0.00 0.00 42.90 3.01
3941 4979 6.873076 ACAGAAGAGCATCAAACTTAGAGAAG 59.127 38.462 0.00 0.00 37.82 2.85
3942 4980 6.763355 ACAGAAGAGCATCAAACTTAGAGAA 58.237 36.000 0.00 0.00 37.82 2.87
3943 4981 6.352016 ACAGAAGAGCATCAAACTTAGAGA 57.648 37.500 0.00 0.00 37.82 3.10
3944 4982 6.620303 GCAACAGAAGAGCATCAAACTTAGAG 60.620 42.308 0.00 0.00 37.82 2.43
3945 4983 5.180117 GCAACAGAAGAGCATCAAACTTAGA 59.820 40.000 0.00 0.00 37.82 2.10
3946 4984 5.180868 AGCAACAGAAGAGCATCAAACTTAG 59.819 40.000 0.00 0.00 37.82 2.18
3947 4985 5.049198 CAGCAACAGAAGAGCATCAAACTTA 60.049 40.000 0.00 0.00 37.82 2.24
3955 4993 2.038164 TCTCACAGCAACAGAAGAGCAT 59.962 45.455 0.00 0.00 0.00 3.79
3988 5026 1.744320 GAAAAGTGCCCGCTGGGTTT 61.744 55.000 13.97 7.36 46.51 3.27
4224 5264 3.075283 TCATGGGACCATAGGTTGTGTTT 59.925 43.478 3.05 0.00 35.25 2.83
4240 5286 3.136763 GCACAGTCATACATCTCATGGG 58.863 50.000 0.00 0.00 33.60 4.00
4395 5447 3.510360 TGAACCGAAAAGACCAAACCAAA 59.490 39.130 0.00 0.00 0.00 3.28
4396 5448 3.090037 TGAACCGAAAAGACCAAACCAA 58.910 40.909 0.00 0.00 0.00 3.67
4397 5449 2.685897 CTGAACCGAAAAGACCAAACCA 59.314 45.455 0.00 0.00 0.00 3.67
4398 5450 2.686405 ACTGAACCGAAAAGACCAAACC 59.314 45.455 0.00 0.00 0.00 3.27
4399 5451 4.365899 AACTGAACCGAAAAGACCAAAC 57.634 40.909 0.00 0.00 0.00 2.93
4452 5504 5.749596 TCGCATGTTAATAGGTTTCCATG 57.250 39.130 0.00 0.00 34.32 3.66
4453 5505 6.299141 AGATCGCATGTTAATAGGTTTCCAT 58.701 36.000 0.00 0.00 0.00 3.41
4492 5546 1.378531 TCATTGAATTTCTCGCCCCG 58.621 50.000 0.00 0.00 0.00 5.73
4524 5578 0.802494 GAACCGTGCGTCCAAATCAT 59.198 50.000 0.00 0.00 0.00 2.45
4561 5615 9.653516 TGCATTTTCCCCTTTATTTCATAGATA 57.346 29.630 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.