Multiple sequence alignment - TraesCS6D01G127300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G127300 chr6D 100.000 2989 0 0 1 2989 91045146 91048134 0.000000e+00 5520.0
1 TraesCS6D01G127300 chr6D 80.438 593 79 23 2047 2614 115269858 115270438 4.610000e-113 418.0
2 TraesCS6D01G127300 chr6A 91.553 1101 58 15 817 1888 109388935 109390029 0.000000e+00 1485.0
3 TraesCS6D01G127300 chr6A 95.000 580 17 4 1 574 109386472 109387045 0.000000e+00 900.0
4 TraesCS6D01G127300 chr6B 91.395 1011 52 13 825 1813 173580268 173581265 0.000000e+00 1352.0
5 TraesCS6D01G127300 chr6B 93.235 680 28 9 1 680 173577519 173578180 0.000000e+00 985.0
6 TraesCS6D01G127300 chr6B 88.608 79 5 3 2539 2614 615143342 615143265 3.170000e-15 93.5
7 TraesCS6D01G127300 chr5D 96.335 382 12 2 2608 2989 354585577 354585956 7.030000e-176 627.0
8 TraesCS6D01G127300 chr5D 82.979 423 47 16 2047 2447 345518303 345518722 2.830000e-95 359.0
9 TraesCS6D01G127300 chr4D 96.533 375 13 0 2615 2989 101316376 101316750 3.270000e-174 621.0
10 TraesCS6D01G127300 chr4D 96.011 376 13 2 2615 2989 91838647 91839021 7.080000e-171 610.0
11 TraesCS6D01G127300 chr4D 95.467 375 17 0 2615 2989 318549093 318549467 1.530000e-167 599.0
12 TraesCS6D01G127300 chr4D 95.479 376 15 2 2615 2989 414492275 414491901 1.530000e-167 599.0
13 TraesCS6D01G127300 chr4D 78.244 262 41 10 2360 2619 298875015 298874768 1.430000e-33 154.0
14 TraesCS6D01G127300 chr7D 96.011 376 14 1 2615 2989 211247772 211247397 7.080000e-171 610.0
15 TraesCS6D01G127300 chr7D 95.238 378 16 2 2612 2989 138429894 138430269 5.510000e-167 597.0
16 TraesCS6D01G127300 chr7D 79.291 536 79 21 2097 2614 477060580 477060059 2.210000e-91 346.0
17 TraesCS6D01G127300 chr1D 96.000 375 13 2 2615 2989 27358401 27358773 2.550000e-170 608.0
18 TraesCS6D01G127300 chr1D 95.989 374 13 2 2617 2989 345765541 345765169 9.160000e-170 606.0
19 TraesCS6D01G127300 chr5B 81.707 574 79 14 2047 2597 191491203 191491773 3.510000e-124 455.0
20 TraesCS6D01G127300 chr5B 87.654 81 4 4 2539 2614 412139407 412139328 4.100000e-14 89.8
21 TraesCS6D01G127300 chr5B 86.420 81 5 4 2539 2614 520259785 520259706 1.910000e-12 84.2
22 TraesCS6D01G127300 chr2A 80.729 576 72 26 2062 2614 534073745 534073186 2.140000e-111 412.0
23 TraesCS6D01G127300 chr2A 81.373 408 59 10 2048 2440 249996891 249996486 1.730000e-82 316.0
24 TraesCS6D01G127300 chr2A 92.063 63 5 0 2552 2614 136410847 136410909 4.100000e-14 89.8
25 TraesCS6D01G127300 chr1B 81.474 502 71 13 2047 2529 654355696 654355198 2.790000e-105 392.0
26 TraesCS6D01G127300 chr1B 88.750 80 4 4 2539 2614 415751231 415751309 3.170000e-15 93.5
27 TraesCS6D01G127300 chr2D 78.655 595 82 24 2047 2614 329417543 329418119 1.320000e-93 353.0
28 TraesCS6D01G127300 chr2D 84.677 248 36 2 2048 2294 250751664 250751418 2.300000e-61 246.0
29 TraesCS6D01G127300 chr2B 78.299 576 88 26 2062 2614 398233587 398234148 1.330000e-88 337.0
30 TraesCS6D01G127300 chr2B 82.275 378 43 14 2062 2416 207229193 207229569 3.740000e-79 305.0
31 TraesCS6D01G127300 chr2B 92.063 63 5 0 2552 2614 320383915 320383853 4.100000e-14 89.8
32 TraesCS6D01G127300 chr2B 87.654 81 5 4 2539 2614 582340610 582340690 4.100000e-14 89.8
33 TraesCS6D01G127300 chr7A 82.645 121 15 5 1 118 653543372 653543255 5.270000e-18 102.0
34 TraesCS6D01G127300 chr7A 91.803 61 5 0 2557 2617 593116273 593116333 5.310000e-13 86.1
35 TraesCS6D01G127300 chr1A 86.486 74 10 0 2363 2436 403515219 403515146 6.870000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G127300 chr6D 91045146 91048134 2988 False 5520.0 5520 100.0000 1 2989 1 chr6D.!!$F1 2988
1 TraesCS6D01G127300 chr6D 115269858 115270438 580 False 418.0 418 80.4380 2047 2614 1 chr6D.!!$F2 567
2 TraesCS6D01G127300 chr6A 109386472 109390029 3557 False 1192.5 1485 93.2765 1 1888 2 chr6A.!!$F1 1887
3 TraesCS6D01G127300 chr6B 173577519 173581265 3746 False 1168.5 1352 92.3150 1 1813 2 chr6B.!!$F1 1812
4 TraesCS6D01G127300 chr7D 477060059 477060580 521 True 346.0 346 79.2910 2097 2614 1 chr7D.!!$R2 517
5 TraesCS6D01G127300 chr5B 191491203 191491773 570 False 455.0 455 81.7070 2047 2597 1 chr5B.!!$F1 550
6 TraesCS6D01G127300 chr2A 534073186 534073745 559 True 412.0 412 80.7290 2062 2614 1 chr2A.!!$R2 552
7 TraesCS6D01G127300 chr2D 329417543 329418119 576 False 353.0 353 78.6550 2047 2614 1 chr2D.!!$F1 567
8 TraesCS6D01G127300 chr2B 398233587 398234148 561 False 337.0 337 78.2990 2062 2614 1 chr2B.!!$F2 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
662 2366 0.326264 AGCCAGAAACTGCACCCTAG 59.674 55.0 0.0 0.0 0.00 3.02 F
1711 5444 0.031585 GGGTGCGTTGGTTTTCCTTC 59.968 55.0 0.0 0.0 41.38 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 5682 0.036858 GCTCCACCAGTCACCTTCTC 60.037 60.0 0.0 0.0 0.00 2.87 R
2738 6510 0.106521 ACAACAATTTGCACTGGGCC 59.893 50.0 0.0 0.0 43.89 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 2.268298 GAATTCCACTTTCTAGCGCGA 58.732 47.619 12.10 0.00 0.00 5.87
137 138 1.641577 ATTCCACTTTCTAGCGCGAC 58.358 50.000 12.10 0.04 0.00 5.19
159 160 1.338579 GGAACCCTGACTGAAGCAGAG 60.339 57.143 0.82 0.00 35.39 3.35
261 262 3.951663 AGGTATAGCTGTGGTTTTGACC 58.048 45.455 3.03 0.00 0.00 4.02
359 366 2.228059 CGAAGAAGGGTATCCGAGCTA 58.772 52.381 0.00 0.00 38.33 3.32
360 367 2.226912 CGAAGAAGGGTATCCGAGCTAG 59.773 54.545 0.00 0.00 38.33 3.42
361 368 1.623163 AGAAGGGTATCCGAGCTAGC 58.377 55.000 6.62 6.62 38.33 3.42
362 369 0.604073 GAAGGGTATCCGAGCTAGCC 59.396 60.000 12.13 1.79 38.33 3.93
504 511 4.425577 GTGCATTCTGGACTAGTTTTGG 57.574 45.455 0.00 0.00 35.71 3.28
506 513 3.181434 TGCATTCTGGACTAGTTTTGGGT 60.181 43.478 0.00 0.00 0.00 4.51
567 574 2.947652 CTCATGATCTGCCGTTCCAAAT 59.052 45.455 0.00 0.00 0.00 2.32
570 577 4.516321 TCATGATCTGCCGTTCCAAATATG 59.484 41.667 0.00 0.00 0.00 1.78
574 581 3.680490 TCTGCCGTTCCAAATATGTTGA 58.320 40.909 0.00 0.00 0.00 3.18
576 583 4.155826 TCTGCCGTTCCAAATATGTTGAAG 59.844 41.667 0.00 0.00 0.00 3.02
577 584 3.823873 TGCCGTTCCAAATATGTTGAAGT 59.176 39.130 0.00 0.00 0.00 3.01
579 586 5.221342 TGCCGTTCCAAATATGTTGAAGTTT 60.221 36.000 0.00 0.00 0.00 2.66
580 587 5.118510 GCCGTTCCAAATATGTTGAAGTTTG 59.881 40.000 0.00 0.00 0.00 2.93
581 588 6.212955 CCGTTCCAAATATGTTGAAGTTTGT 58.787 36.000 0.00 0.00 31.42 2.83
582 589 7.364200 CCGTTCCAAATATGTTGAAGTTTGTA 58.636 34.615 0.00 0.00 31.42 2.41
583 590 7.863375 CCGTTCCAAATATGTTGAAGTTTGTAA 59.137 33.333 0.00 0.00 31.42 2.41
584 591 8.687301 CGTTCCAAATATGTTGAAGTTTGTAAC 58.313 33.333 0.00 0.00 31.32 2.50
585 592 9.744468 GTTCCAAATATGTTGAAGTTTGTAACT 57.256 29.630 0.00 0.00 45.46 2.24
612 2316 5.697633 GTGATGATGTGATTTGCCACTTTTT 59.302 36.000 0.00 0.00 37.89 1.94
618 2322 6.418057 TGTGATTTGCCACTTTTTAGGATT 57.582 33.333 0.00 0.00 37.89 3.01
622 2326 8.925700 GTGATTTGCCACTTTTTAGGATTTAAG 58.074 33.333 0.00 0.00 34.38 1.85
624 2328 5.054390 TGCCACTTTTTAGGATTTAAGCG 57.946 39.130 0.00 0.00 0.00 4.68
630 2334 6.854381 CACTTTTTAGGATTTAAGCGACGTTT 59.146 34.615 1.72 1.72 0.00 3.60
634 2338 4.923264 AGGATTTAAGCGACGTTTCTTC 57.077 40.909 0.00 0.00 0.00 2.87
636 2340 4.995487 AGGATTTAAGCGACGTTTCTTCTT 59.005 37.500 0.00 0.00 0.00 2.52
637 2341 5.080068 GGATTTAAGCGACGTTTCTTCTTG 58.920 41.667 0.00 0.00 0.00 3.02
639 2343 0.586802 AAGCGACGTTTCTTCTTGCC 59.413 50.000 0.00 0.00 0.00 4.52
647 2351 1.336755 GTTTCTTCTTGCCGAAAGCCA 59.663 47.619 0.00 0.00 42.71 4.75
654 2358 0.667993 TTGCCGAAAGCCAGAAACTG 59.332 50.000 0.00 0.00 42.71 3.16
662 2366 0.326264 AGCCAGAAACTGCACCCTAG 59.674 55.000 0.00 0.00 0.00 3.02
687 2391 9.423061 AGTTTCCAAAAATTCCGAATTATGAAG 57.577 29.630 15.93 5.79 0.00 3.02
688 2392 9.203421 GTTTCCAAAAATTCCGAATTATGAAGT 57.797 29.630 15.93 0.00 0.00 3.01
690 2394 9.849166 TTCCAAAAATTCCGAATTATGAAGTAC 57.151 29.630 15.93 0.00 0.00 2.73
691 2395 8.463607 TCCAAAAATTCCGAATTATGAAGTACC 58.536 33.333 15.93 0.00 0.00 3.34
692 2396 7.431084 CCAAAAATTCCGAATTATGAAGTACCG 59.569 37.037 15.93 0.00 0.00 4.02
694 2398 6.598753 AATTCCGAATTATGAAGTACCGTG 57.401 37.500 4.46 0.00 0.00 4.94
695 2399 4.049546 TCCGAATTATGAAGTACCGTGG 57.950 45.455 0.00 0.00 0.00 4.94
697 2401 3.191669 CGAATTATGAAGTACCGTGGCA 58.808 45.455 0.00 0.00 0.00 4.92
769 4457 4.470602 TCATCATAGAAAGGCGTAGGAGA 58.529 43.478 0.00 0.00 0.00 3.71
770 4458 5.080337 TCATCATAGAAAGGCGTAGGAGAT 58.920 41.667 0.00 0.00 0.00 2.75
780 4468 4.962155 AGGCGTAGGAGATTATGAAAAGG 58.038 43.478 0.00 0.00 0.00 3.11
781 4469 3.498777 GGCGTAGGAGATTATGAAAAGGC 59.501 47.826 0.00 0.00 0.00 4.35
813 4501 8.034058 AGAAAGATCTGATTCCTGTTTTTACG 57.966 34.615 0.00 0.00 33.59 3.18
814 4502 7.878127 AGAAAGATCTGATTCCTGTTTTTACGA 59.122 33.333 0.00 0.00 33.59 3.43
815 4503 7.602517 AAGATCTGATTCCTGTTTTTACGAG 57.397 36.000 0.00 0.00 0.00 4.18
816 4504 6.936279 AGATCTGATTCCTGTTTTTACGAGA 58.064 36.000 0.00 0.00 0.00 4.04
817 4505 7.386851 AGATCTGATTCCTGTTTTTACGAGAA 58.613 34.615 0.00 0.00 0.00 2.87
818 4506 7.878127 AGATCTGATTCCTGTTTTTACGAGAAA 59.122 33.333 0.00 0.00 0.00 2.52
819 4507 7.795482 TCTGATTCCTGTTTTTACGAGAAAA 57.205 32.000 0.00 0.00 0.00 2.29
820 4508 8.215926 TCTGATTCCTGTTTTTACGAGAAAAA 57.784 30.769 8.11 8.11 30.95 1.94
821 4509 8.342634 TCTGATTCCTGTTTTTACGAGAAAAAG 58.657 33.333 11.28 3.96 30.95 2.27
822 4510 8.215926 TGATTCCTGTTTTTACGAGAAAAAGA 57.784 30.769 11.28 9.90 30.95 2.52
823 4511 8.846211 TGATTCCTGTTTTTACGAGAAAAAGAT 58.154 29.630 11.28 0.00 30.95 2.40
859 4547 5.232463 CAGGAACAAAATCTGAATTGGTGG 58.768 41.667 10.18 0.00 0.00 4.61
862 4550 6.015434 AGGAACAAAATCTGAATTGGTGGTAC 60.015 38.462 10.18 0.00 0.00 3.34
906 4594 4.144681 GCTGCTCGTCTGCTTGCG 62.145 66.667 0.00 0.00 36.79 4.85
1015 4716 0.036010 ATCGTTTCCCTCCACTGCTG 60.036 55.000 0.00 0.00 0.00 4.41
1018 4719 0.890996 GTTTCCCTCCACTGCTGGTG 60.891 60.000 0.00 0.00 44.96 4.17
1046 4747 3.004106 CCGTCCGTCCGTATTAAATCTCT 59.996 47.826 0.00 0.00 0.00 3.10
1048 4749 4.544651 GTCCGTCCGTATTAAATCTCTCC 58.455 47.826 0.00 0.00 0.00 3.71
1568 5301 3.200593 GTGCAGATGGCTCGCTGG 61.201 66.667 0.00 0.00 45.15 4.85
1579 5312 1.355066 GCTCGCTGGACTTTCTTCCG 61.355 60.000 0.00 0.00 38.69 4.30
1648 5381 4.517952 TCCGGTCTAATTTTGTGTCGTA 57.482 40.909 0.00 0.00 0.00 3.43
1711 5444 0.031585 GGGTGCGTTGGTTTTCCTTC 59.968 55.000 0.00 0.00 41.38 3.46
1712 5445 1.029681 GGTGCGTTGGTTTTCCTTCT 58.970 50.000 0.00 0.00 41.38 2.85
1717 5450 3.886505 TGCGTTGGTTTTCCTTCTGTTAT 59.113 39.130 0.00 0.00 41.38 1.89
1819 5554 5.300752 ACGGATAGAGCAGGACAAATATTG 58.699 41.667 0.00 0.00 0.00 1.90
1822 5557 6.312426 CGGATAGAGCAGGACAAATATTGATC 59.688 42.308 0.00 0.00 0.00 2.92
1830 5565 7.070447 AGCAGGACAAATATTGATCTCTGTCTA 59.930 37.037 12.92 0.00 34.85 2.59
1841 5576 6.278172 TGATCTCTGTCTATGCATATGGAC 57.722 41.667 15.71 15.71 43.03 4.02
1866 5601 6.092670 CGGATATCGCCAAACAATGAATCTAT 59.907 38.462 0.00 0.00 0.00 1.98
1867 5602 7.467623 GGATATCGCCAAACAATGAATCTATC 58.532 38.462 0.00 0.00 0.00 2.08
1868 5603 5.695851 ATCGCCAAACAATGAATCTATCC 57.304 39.130 0.00 0.00 0.00 2.59
1869 5604 4.522114 TCGCCAAACAATGAATCTATCCA 58.478 39.130 0.00 0.00 0.00 3.41
1870 5605 4.335315 TCGCCAAACAATGAATCTATCCAC 59.665 41.667 0.00 0.00 0.00 4.02
1871 5606 4.498009 CGCCAAACAATGAATCTATCCACC 60.498 45.833 0.00 0.00 0.00 4.61
1872 5607 4.646492 GCCAAACAATGAATCTATCCACCT 59.354 41.667 0.00 0.00 0.00 4.00
1873 5608 5.221126 GCCAAACAATGAATCTATCCACCTC 60.221 44.000 0.00 0.00 0.00 3.85
1874 5609 5.008019 CCAAACAATGAATCTATCCACCTCG 59.992 44.000 0.00 0.00 0.00 4.63
1875 5610 5.614324 AACAATGAATCTATCCACCTCGA 57.386 39.130 0.00 0.00 0.00 4.04
1876 5611 5.614324 ACAATGAATCTATCCACCTCGAA 57.386 39.130 0.00 0.00 0.00 3.71
1877 5612 6.179906 ACAATGAATCTATCCACCTCGAAT 57.820 37.500 0.00 0.00 0.00 3.34
1878 5613 5.994054 ACAATGAATCTATCCACCTCGAATG 59.006 40.000 0.00 0.00 0.00 2.67
1879 5614 5.815233 ATGAATCTATCCACCTCGAATGT 57.185 39.130 0.00 0.00 0.00 2.71
1880 5615 6.918067 ATGAATCTATCCACCTCGAATGTA 57.082 37.500 0.00 0.00 0.00 2.29
1881 5616 6.724893 TGAATCTATCCACCTCGAATGTAA 57.275 37.500 0.00 0.00 0.00 2.41
1882 5617 6.749139 TGAATCTATCCACCTCGAATGTAAG 58.251 40.000 0.00 0.00 0.00 2.34
1883 5618 5.730296 ATCTATCCACCTCGAATGTAAGG 57.270 43.478 0.00 0.00 38.70 2.69
1884 5619 4.800023 TCTATCCACCTCGAATGTAAGGA 58.200 43.478 0.00 0.00 36.46 3.36
1885 5620 5.394738 TCTATCCACCTCGAATGTAAGGAT 58.605 41.667 9.94 9.94 38.00 3.24
1886 5621 5.839063 TCTATCCACCTCGAATGTAAGGATT 59.161 40.000 10.20 0.00 36.02 3.01
1887 5622 4.137116 TCCACCTCGAATGTAAGGATTG 57.863 45.455 0.00 0.00 36.46 2.67
1888 5623 3.772572 TCCACCTCGAATGTAAGGATTGA 59.227 43.478 0.00 0.00 36.46 2.57
1889 5624 4.224147 TCCACCTCGAATGTAAGGATTGAA 59.776 41.667 0.00 0.00 36.46 2.69
1890 5625 5.104527 TCCACCTCGAATGTAAGGATTGAAT 60.105 40.000 0.00 0.00 36.46 2.57
1891 5626 5.590259 CCACCTCGAATGTAAGGATTGAATT 59.410 40.000 0.00 0.00 36.46 2.17
1892 5627 6.095440 CCACCTCGAATGTAAGGATTGAATTT 59.905 38.462 0.00 0.00 36.46 1.82
1893 5628 6.968904 CACCTCGAATGTAAGGATTGAATTTG 59.031 38.462 0.00 0.00 36.46 2.32
1894 5629 6.884295 ACCTCGAATGTAAGGATTGAATTTGA 59.116 34.615 0.00 0.00 36.46 2.69
1895 5630 7.148239 ACCTCGAATGTAAGGATTGAATTTGAC 60.148 37.037 0.00 0.00 36.46 3.18
1896 5631 7.148255 CCTCGAATGTAAGGATTGAATTTGACA 60.148 37.037 0.00 0.00 34.35 3.58
1897 5632 7.751732 TCGAATGTAAGGATTGAATTTGACAG 58.248 34.615 0.00 0.00 0.00 3.51
1898 5633 7.390440 TCGAATGTAAGGATTGAATTTGACAGT 59.610 33.333 0.00 0.00 0.00 3.55
1899 5634 7.482743 CGAATGTAAGGATTGAATTTGACAGTG 59.517 37.037 0.00 0.00 0.00 3.66
1900 5635 8.408043 AATGTAAGGATTGAATTTGACAGTGA 57.592 30.769 0.00 0.00 0.00 3.41
1901 5636 7.202016 TGTAAGGATTGAATTTGACAGTGAC 57.798 36.000 0.00 0.00 0.00 3.67
1902 5637 6.998074 TGTAAGGATTGAATTTGACAGTGACT 59.002 34.615 0.00 0.00 0.00 3.41
1903 5638 6.966534 AAGGATTGAATTTGACAGTGACTT 57.033 33.333 0.00 0.00 0.00 3.01
1904 5639 6.323203 AGGATTGAATTTGACAGTGACTTG 57.677 37.500 0.00 0.00 0.00 3.16
1905 5640 6.064060 AGGATTGAATTTGACAGTGACTTGA 58.936 36.000 0.00 0.00 0.00 3.02
1906 5641 6.718454 AGGATTGAATTTGACAGTGACTTGAT 59.282 34.615 0.00 0.00 0.00 2.57
1907 5642 7.884877 AGGATTGAATTTGACAGTGACTTGATA 59.115 33.333 0.00 0.00 0.00 2.15
1908 5643 8.680903 GGATTGAATTTGACAGTGACTTGATAT 58.319 33.333 0.00 0.00 0.00 1.63
1909 5644 9.499585 GATTGAATTTGACAGTGACTTGATATG 57.500 33.333 0.00 0.00 0.00 1.78
1910 5645 7.381766 TGAATTTGACAGTGACTTGATATGG 57.618 36.000 0.00 0.00 0.00 2.74
1911 5646 6.942005 TGAATTTGACAGTGACTTGATATGGT 59.058 34.615 0.00 0.00 0.00 3.55
1912 5647 6.992063 ATTTGACAGTGACTTGATATGGTC 57.008 37.500 0.00 0.00 0.00 4.02
1913 5648 5.745312 TTGACAGTGACTTGATATGGTCT 57.255 39.130 0.00 0.00 34.01 3.85
1914 5649 5.745312 TGACAGTGACTTGATATGGTCTT 57.255 39.130 0.00 0.00 34.01 3.01
1915 5650 6.850752 TGACAGTGACTTGATATGGTCTTA 57.149 37.500 0.00 0.00 34.01 2.10
1916 5651 7.423844 TGACAGTGACTTGATATGGTCTTAT 57.576 36.000 0.00 0.00 34.01 1.73
1917 5652 8.533569 TGACAGTGACTTGATATGGTCTTATA 57.466 34.615 0.00 0.00 34.01 0.98
1918 5653 8.977412 TGACAGTGACTTGATATGGTCTTATAA 58.023 33.333 0.00 0.00 34.01 0.98
1919 5654 9.250624 GACAGTGACTTGATATGGTCTTATAAC 57.749 37.037 0.00 0.00 34.01 1.89
1920 5655 8.204836 ACAGTGACTTGATATGGTCTTATAACC 58.795 37.037 0.00 0.00 39.94 2.85
1921 5656 7.657761 CAGTGACTTGATATGGTCTTATAACCC 59.342 40.741 0.00 0.00 38.65 4.11
1922 5657 7.347222 AGTGACTTGATATGGTCTTATAACCCA 59.653 37.037 2.41 2.41 38.65 4.51
1923 5658 8.157476 GTGACTTGATATGGTCTTATAACCCAT 58.843 37.037 13.73 13.73 41.70 4.00
1924 5659 8.156820 TGACTTGATATGGTCTTATAACCCATG 58.843 37.037 16.92 6.97 39.29 3.66
1925 5660 7.461749 ACTTGATATGGTCTTATAACCCATGG 58.538 38.462 16.92 4.14 39.29 3.66
1926 5661 7.073725 ACTTGATATGGTCTTATAACCCATGGT 59.926 37.037 11.73 0.00 39.29 3.55
1927 5662 6.778821 TGATATGGTCTTATAACCCATGGTG 58.221 40.000 11.73 4.77 39.29 4.17
1928 5663 6.331572 TGATATGGTCTTATAACCCATGGTGT 59.668 38.462 11.73 5.47 39.29 4.16
1929 5664 4.938575 TGGTCTTATAACCCATGGTGTT 57.061 40.909 18.72 18.72 38.65 3.32
1930 5665 5.263872 TGGTCTTATAACCCATGGTGTTT 57.736 39.130 19.58 9.20 38.65 2.83
1931 5666 5.258051 TGGTCTTATAACCCATGGTGTTTC 58.742 41.667 19.58 7.63 38.65 2.78
1932 5667 5.014755 TGGTCTTATAACCCATGGTGTTTCT 59.985 40.000 19.58 12.23 38.65 2.52
1933 5668 5.357032 GGTCTTATAACCCATGGTGTTTCTG 59.643 44.000 19.58 10.63 35.34 3.02
1934 5669 6.177610 GTCTTATAACCCATGGTGTTTCTGA 58.822 40.000 19.58 12.15 35.34 3.27
1935 5670 6.316390 GTCTTATAACCCATGGTGTTTCTGAG 59.684 42.308 19.58 14.23 35.34 3.35
1936 5671 4.657814 ATAACCCATGGTGTTTCTGAGT 57.342 40.909 19.58 1.84 35.34 3.41
1937 5672 2.276732 ACCCATGGTGTTTCTGAGTG 57.723 50.000 11.73 0.00 32.98 3.51
1938 5673 1.774254 ACCCATGGTGTTTCTGAGTGA 59.226 47.619 11.73 0.00 32.98 3.41
1939 5674 2.174639 ACCCATGGTGTTTCTGAGTGAA 59.825 45.455 11.73 0.00 32.98 3.18
1940 5675 3.221771 CCCATGGTGTTTCTGAGTGAAA 58.778 45.455 11.73 0.00 41.85 2.69
1952 5687 6.624352 TTCTGAGTGAAACAAATGGAGAAG 57.376 37.500 0.00 0.00 41.43 2.85
1953 5688 5.065914 TCTGAGTGAAACAAATGGAGAAGG 58.934 41.667 0.00 0.00 41.43 3.46
1954 5689 4.792068 TGAGTGAAACAAATGGAGAAGGT 58.208 39.130 0.00 0.00 41.43 3.50
1955 5690 4.580167 TGAGTGAAACAAATGGAGAAGGTG 59.420 41.667 0.00 0.00 41.43 4.00
1956 5691 4.792068 AGTGAAACAAATGGAGAAGGTGA 58.208 39.130 0.00 0.00 41.43 4.02
1957 5692 4.580580 AGTGAAACAAATGGAGAAGGTGAC 59.419 41.667 0.00 0.00 41.43 3.67
1958 5693 4.580580 GTGAAACAAATGGAGAAGGTGACT 59.419 41.667 0.00 0.00 39.15 3.41
1959 5694 4.580167 TGAAACAAATGGAGAAGGTGACTG 59.420 41.667 0.00 0.00 42.68 3.51
1960 5695 3.146104 ACAAATGGAGAAGGTGACTGG 57.854 47.619 0.00 0.00 42.68 4.00
1961 5696 2.443255 ACAAATGGAGAAGGTGACTGGT 59.557 45.455 0.00 0.00 42.68 4.00
1962 5697 2.816087 CAAATGGAGAAGGTGACTGGTG 59.184 50.000 0.00 0.00 42.68 4.17
1963 5698 0.987294 ATGGAGAAGGTGACTGGTGG 59.013 55.000 0.00 0.00 42.68 4.61
1964 5699 0.105194 TGGAGAAGGTGACTGGTGGA 60.105 55.000 0.00 0.00 42.68 4.02
1965 5700 0.610687 GGAGAAGGTGACTGGTGGAG 59.389 60.000 0.00 0.00 42.68 3.86
1966 5701 0.036858 GAGAAGGTGACTGGTGGAGC 60.037 60.000 0.00 0.00 42.68 4.70
1967 5702 0.472734 AGAAGGTGACTGGTGGAGCT 60.473 55.000 0.00 0.00 42.68 4.09
1968 5703 1.203187 AGAAGGTGACTGGTGGAGCTA 60.203 52.381 0.00 0.00 42.68 3.32
1969 5704 1.834263 GAAGGTGACTGGTGGAGCTAT 59.166 52.381 0.00 0.00 42.68 2.97
1970 5705 1.490574 AGGTGACTGGTGGAGCTATC 58.509 55.000 0.00 0.00 41.13 2.08
1971 5706 0.103208 GGTGACTGGTGGAGCTATCG 59.897 60.000 0.00 0.00 0.00 2.92
1972 5707 0.818296 GTGACTGGTGGAGCTATCGT 59.182 55.000 0.00 0.00 0.00 3.73
1973 5708 1.103803 TGACTGGTGGAGCTATCGTC 58.896 55.000 0.00 0.00 0.00 4.20
1974 5709 1.103803 GACTGGTGGAGCTATCGTCA 58.896 55.000 0.00 0.00 0.00 4.35
1975 5710 0.818296 ACTGGTGGAGCTATCGTCAC 59.182 55.000 0.00 0.00 0.00 3.67
1976 5711 1.107114 CTGGTGGAGCTATCGTCACT 58.893 55.000 0.00 0.00 0.00 3.41
1977 5712 0.817654 TGGTGGAGCTATCGTCACTG 59.182 55.000 0.00 0.00 0.00 3.66
1978 5713 0.103208 GGTGGAGCTATCGTCACTGG 59.897 60.000 0.00 0.00 0.00 4.00
1979 5714 1.103803 GTGGAGCTATCGTCACTGGA 58.896 55.000 0.00 0.00 0.00 3.86
1980 5715 1.066303 GTGGAGCTATCGTCACTGGAG 59.934 57.143 0.00 0.00 0.00 3.86
1981 5716 1.064685 TGGAGCTATCGTCACTGGAGA 60.065 52.381 0.00 0.00 0.00 3.71
1982 5717 2.025155 GGAGCTATCGTCACTGGAGAA 58.975 52.381 0.00 0.00 0.00 2.87
1983 5718 2.625790 GGAGCTATCGTCACTGGAGAAT 59.374 50.000 0.00 0.00 0.00 2.40
1984 5719 3.821600 GGAGCTATCGTCACTGGAGAATA 59.178 47.826 0.00 0.00 0.00 1.75
1985 5720 4.278669 GGAGCTATCGTCACTGGAGAATAA 59.721 45.833 0.00 0.00 0.00 1.40
1986 5721 5.221263 GGAGCTATCGTCACTGGAGAATAAA 60.221 44.000 0.00 0.00 0.00 1.40
1987 5722 6.222038 AGCTATCGTCACTGGAGAATAAAA 57.778 37.500 0.00 0.00 0.00 1.52
1988 5723 6.276847 AGCTATCGTCACTGGAGAATAAAAG 58.723 40.000 0.00 0.00 0.00 2.27
1989 5724 5.463724 GCTATCGTCACTGGAGAATAAAAGG 59.536 44.000 0.00 0.00 0.00 3.11
1990 5725 5.677319 ATCGTCACTGGAGAATAAAAGGA 57.323 39.130 0.00 0.00 0.00 3.36
1991 5726 5.073311 TCGTCACTGGAGAATAAAAGGAG 57.927 43.478 0.00 0.00 0.00 3.69
1992 5727 4.770531 TCGTCACTGGAGAATAAAAGGAGA 59.229 41.667 0.00 0.00 0.00 3.71
1993 5728 5.422331 TCGTCACTGGAGAATAAAAGGAGAT 59.578 40.000 0.00 0.00 0.00 2.75
1994 5729 5.521735 CGTCACTGGAGAATAAAAGGAGATG 59.478 44.000 0.00 0.00 0.00 2.90
1995 5730 5.819901 GTCACTGGAGAATAAAAGGAGATGG 59.180 44.000 0.00 0.00 0.00 3.51
1996 5731 5.104360 TCACTGGAGAATAAAAGGAGATGGG 60.104 44.000 0.00 0.00 0.00 4.00
1997 5732 4.166919 ACTGGAGAATAAAAGGAGATGGGG 59.833 45.833 0.00 0.00 0.00 4.96
1998 5733 3.463329 TGGAGAATAAAAGGAGATGGGGG 59.537 47.826 0.00 0.00 0.00 5.40
2031 5766 4.199672 GGGGGTTACCGGGATGGC 62.200 72.222 6.32 0.00 43.94 4.40
2032 5767 4.199672 GGGGTTACCGGGATGGCC 62.200 72.222 6.32 0.00 43.94 5.36
2033 5768 3.094498 GGGTTACCGGGATGGCCT 61.094 66.667 6.32 0.00 43.94 5.19
2034 5769 2.192175 GGTTACCGGGATGGCCTG 59.808 66.667 6.32 0.00 43.94 4.85
2059 5794 3.419759 CGTGGCCAGCCGTTGTAC 61.420 66.667 5.11 0.00 39.42 2.90
2060 5795 2.281208 GTGGCCAGCCGTTGTACA 60.281 61.111 5.11 0.00 39.42 2.90
2080 5815 6.934645 TGTACAAAGAGGACGAAAGATTGAAT 59.065 34.615 0.00 0.00 0.00 2.57
2157 5893 1.280133 CTGCTGGATCCACCTGAGAAA 59.720 52.381 11.44 0.00 39.52 2.52
2159 5895 1.556911 GCTGGATCCACCTGAGAAAGA 59.443 52.381 11.44 0.00 39.52 2.52
2162 5898 2.834549 TGGATCCACCTGAGAAAGAGAC 59.165 50.000 11.44 0.00 39.86 3.36
2168 5904 4.707448 TCCACCTGAGAAAGAGACTATGTC 59.293 45.833 0.00 0.00 0.00 3.06
2203 5939 1.453015 AAAGCACACCAGCCGTTGA 60.453 52.632 0.00 0.00 34.23 3.18
2219 5955 7.257722 CAGCCGTTGAATTTTAATCTAATGGT 58.742 34.615 0.00 0.00 0.00 3.55
2247 5983 1.478510 AGGACTGACGCAAGAGGTATG 59.521 52.381 0.00 0.00 43.62 2.39
2264 6000 9.628500 AAGAGGTATGAAACTTAACTTGTTCTT 57.372 29.630 0.00 0.00 0.00 2.52
2271 6007 9.705290 ATGAAACTTAACTTGTTCTTGTTGTTT 57.295 25.926 0.00 0.00 30.42 2.83
2276 6012 7.593644 ACTTAACTTGTTCTTGTTGTTTGTGAC 59.406 33.333 0.00 0.00 0.00 3.67
2300 6051 6.386927 ACCAAAGATGACCACCTGATAATCTA 59.613 38.462 0.00 0.00 0.00 1.98
2308 6059 5.826643 ACCACCTGATAATCTAGGCAAAAA 58.173 37.500 0.00 0.00 37.61 1.94
2343 6094 1.336517 CCTACAGAAAACCGCACTCGA 60.337 52.381 0.00 0.00 38.10 4.04
2416 6177 2.823758 TTGTGGGCCACGGATGTCA 61.824 57.895 30.14 9.47 37.14 3.58
2419 6180 0.108585 GTGGGCCACGGATGTCATAT 59.891 55.000 22.83 0.00 0.00 1.78
2440 6201 0.560688 AAAAGAAACCTGGGCTGGGA 59.439 50.000 0.00 0.00 0.00 4.37
2475 6236 7.465379 CGCAGTTGATATCAAATCGACCTAAAA 60.465 37.037 19.55 0.00 37.63 1.52
2476 6237 7.852945 GCAGTTGATATCAAATCGACCTAAAAG 59.147 37.037 19.55 4.27 37.63 2.27
2493 6258 5.359860 CCTAAAAGAAAGGAAACACACCAGT 59.640 40.000 0.00 0.00 36.08 4.00
2508 6273 4.038763 CACACCAGTCCAGTGAACTAGTAA 59.961 45.833 0.00 0.00 38.63 2.24
2545 6310 4.529897 TGAGCAAACAGATTCATAGCCAT 58.470 39.130 0.00 0.00 0.00 4.40
2547 6312 6.121590 TGAGCAAACAGATTCATAGCCATTA 58.878 36.000 0.00 0.00 0.00 1.90
2628 6400 4.650754 ACATAGGTGATACGTCTCCAAC 57.349 45.455 0.00 0.00 39.86 3.77
2645 6417 9.027129 CGTCTCCAACGTATCTATAATTTTTGA 57.973 33.333 0.00 0.00 46.42 2.69
2690 6462 7.775053 TTCTGTTTTGGATGTTTAATAGGCT 57.225 32.000 0.00 0.00 0.00 4.58
2691 6463 7.775053 TCTGTTTTGGATGTTTAATAGGCTT 57.225 32.000 0.00 0.00 0.00 4.35
2692 6464 8.189119 TCTGTTTTGGATGTTTAATAGGCTTT 57.811 30.769 0.00 0.00 0.00 3.51
2693 6465 9.303116 TCTGTTTTGGATGTTTAATAGGCTTTA 57.697 29.630 0.00 0.00 0.00 1.85
2734 6506 9.690913 ATTATTTTTGGGACTAACCTACTAACC 57.309 33.333 0.00 0.00 38.98 2.85
2735 6507 5.503634 TTTTGGGACTAACCTACTAACCC 57.496 43.478 0.00 0.00 38.98 4.11
2736 6508 3.850917 TGGGACTAACCTACTAACCCA 57.149 47.619 0.00 0.00 42.70 4.51
2737 6509 4.144825 TGGGACTAACCTACTAACCCAA 57.855 45.455 0.00 0.00 42.11 4.12
2738 6510 4.098894 TGGGACTAACCTACTAACCCAAG 58.901 47.826 0.00 0.00 42.11 3.61
2739 6511 3.453717 GGGACTAACCTACTAACCCAAGG 59.546 52.174 0.00 0.00 38.98 3.61
2740 6512 3.118482 GGACTAACCTACTAACCCAAGGC 60.118 52.174 0.00 0.00 33.42 4.35
2741 6513 2.842496 ACTAACCTACTAACCCAAGGCC 59.158 50.000 0.00 0.00 33.42 5.19
2742 6514 0.997363 AACCTACTAACCCAAGGCCC 59.003 55.000 0.00 0.00 33.42 5.80
2743 6515 0.178855 ACCTACTAACCCAAGGCCCA 60.179 55.000 0.00 0.00 33.42 5.36
2744 6516 0.546598 CCTACTAACCCAAGGCCCAG 59.453 60.000 0.00 0.00 0.00 4.45
2745 6517 1.286248 CTACTAACCCAAGGCCCAGT 58.714 55.000 0.00 0.00 0.00 4.00
2746 6518 0.988832 TACTAACCCAAGGCCCAGTG 59.011 55.000 0.00 0.00 0.00 3.66
2747 6519 1.678970 CTAACCCAAGGCCCAGTGC 60.679 63.158 0.00 0.00 40.16 4.40
2748 6520 2.424842 CTAACCCAAGGCCCAGTGCA 62.425 60.000 0.00 0.00 43.89 4.57
2749 6521 2.012824 TAACCCAAGGCCCAGTGCAA 62.013 55.000 0.00 0.00 43.89 4.08
2750 6522 2.523902 CCCAAGGCCCAGTGCAAA 60.524 61.111 0.00 0.00 43.89 3.68
2751 6523 1.914764 CCCAAGGCCCAGTGCAAAT 60.915 57.895 0.00 0.00 43.89 2.32
2752 6524 1.482748 CCCAAGGCCCAGTGCAAATT 61.483 55.000 0.00 0.00 43.89 1.82
2753 6525 0.320946 CCAAGGCCCAGTGCAAATTG 60.321 55.000 0.00 0.00 43.89 2.32
2754 6526 0.393820 CAAGGCCCAGTGCAAATTGT 59.606 50.000 0.00 0.00 43.89 2.71
2755 6527 1.130777 AAGGCCCAGTGCAAATTGTT 58.869 45.000 0.00 0.00 43.89 2.83
2756 6528 0.393820 AGGCCCAGTGCAAATTGTTG 59.606 50.000 0.00 0.00 43.89 3.33
2757 6529 0.106521 GGCCCAGTGCAAATTGTTGT 59.893 50.000 0.00 0.00 43.89 3.32
2758 6530 1.474855 GGCCCAGTGCAAATTGTTGTT 60.475 47.619 0.00 0.00 43.89 2.83
2759 6531 2.287769 GCCCAGTGCAAATTGTTGTTT 58.712 42.857 0.00 0.00 40.77 2.83
2760 6532 2.682352 GCCCAGTGCAAATTGTTGTTTT 59.318 40.909 0.00 0.00 40.77 2.43
2761 6533 3.128415 GCCCAGTGCAAATTGTTGTTTTT 59.872 39.130 0.00 0.00 40.77 1.94
2782 6554 5.508200 TTTTGCCTATTTCAGTGTTTCGT 57.492 34.783 0.00 0.00 0.00 3.85
2783 6555 6.621316 TTTTGCCTATTTCAGTGTTTCGTA 57.379 33.333 0.00 0.00 0.00 3.43
2784 6556 5.856126 TTGCCTATTTCAGTGTTTCGTAG 57.144 39.130 0.00 0.00 0.00 3.51
2785 6557 5.142061 TGCCTATTTCAGTGTTTCGTAGA 57.858 39.130 0.00 0.00 0.00 2.59
2786 6558 5.543714 TGCCTATTTCAGTGTTTCGTAGAA 58.456 37.500 0.00 0.00 45.90 2.10
2787 6559 5.992829 TGCCTATTTCAGTGTTTCGTAGAAA 59.007 36.000 0.00 0.00 45.90 2.52
2788 6560 6.483974 TGCCTATTTCAGTGTTTCGTAGAAAA 59.516 34.615 0.00 0.00 45.90 2.29
2789 6561 7.015877 GCCTATTTCAGTGTTTCGTAGAAAAG 58.984 38.462 0.00 0.00 45.90 2.27
2790 6562 7.519002 CCTATTTCAGTGTTTCGTAGAAAAGG 58.481 38.462 0.00 0.00 45.90 3.11
2791 6563 7.386848 CCTATTTCAGTGTTTCGTAGAAAAGGA 59.613 37.037 0.00 0.00 45.90 3.36
2792 6564 6.988622 TTTCAGTGTTTCGTAGAAAAGGAA 57.011 33.333 0.00 0.00 45.90 3.36
2793 6565 7.562454 TTTCAGTGTTTCGTAGAAAAGGAAT 57.438 32.000 0.00 0.00 45.90 3.01
2794 6566 8.665643 TTTCAGTGTTTCGTAGAAAAGGAATA 57.334 30.769 0.00 0.00 45.90 1.75
2795 6567 8.842358 TTCAGTGTTTCGTAGAAAAGGAATAT 57.158 30.769 0.00 0.00 45.90 1.28
2796 6568 8.475331 TCAGTGTTTCGTAGAAAAGGAATATC 57.525 34.615 0.00 0.00 45.90 1.63
2797 6569 8.092068 TCAGTGTTTCGTAGAAAAGGAATATCA 58.908 33.333 0.00 0.00 45.90 2.15
2798 6570 8.717821 CAGTGTTTCGTAGAAAAGGAATATCAA 58.282 33.333 0.00 0.00 45.90 2.57
2799 6571 9.280174 AGTGTTTCGTAGAAAAGGAATATCAAA 57.720 29.630 0.00 0.00 45.90 2.69
2800 6572 9.326339 GTGTTTCGTAGAAAAGGAATATCAAAC 57.674 33.333 0.00 0.00 45.90 2.93
2801 6573 8.225107 TGTTTCGTAGAAAAGGAATATCAAACG 58.775 33.333 0.00 0.00 45.90 3.60
2802 6574 6.897259 TCGTAGAAAAGGAATATCAAACGG 57.103 37.500 0.00 0.00 0.00 4.44
2803 6575 6.632909 TCGTAGAAAAGGAATATCAAACGGA 58.367 36.000 0.00 0.00 0.00 4.69
2804 6576 6.755141 TCGTAGAAAAGGAATATCAAACGGAG 59.245 38.462 0.00 0.00 0.00 4.63
2806 6578 6.986904 AGAAAAGGAATATCAAACGGAGTC 57.013 37.500 0.00 0.00 45.00 3.36
2807 6579 5.880887 AGAAAAGGAATATCAAACGGAGTCC 59.119 40.000 0.00 0.00 45.00 3.85
2808 6580 4.837093 AAGGAATATCAAACGGAGTCCA 57.163 40.909 10.49 0.00 45.00 4.02
2809 6581 4.837093 AGGAATATCAAACGGAGTCCAA 57.163 40.909 10.49 0.00 45.00 3.53
2810 6582 5.174037 AGGAATATCAAACGGAGTCCAAA 57.826 39.130 10.49 0.00 45.00 3.28
2811 6583 4.941873 AGGAATATCAAACGGAGTCCAAAC 59.058 41.667 10.49 0.00 45.00 2.93
2812 6584 4.201783 GGAATATCAAACGGAGTCCAAACG 60.202 45.833 10.49 0.00 45.00 3.60
2813 6585 1.519408 ATCAAACGGAGTCCAAACGG 58.481 50.000 10.49 0.00 45.00 4.44
2814 6586 0.464870 TCAAACGGAGTCCAAACGGA 59.535 50.000 10.49 0.00 45.00 4.69
2815 6587 1.134461 TCAAACGGAGTCCAAACGGAA 60.134 47.619 10.49 0.00 45.00 4.30
2816 6588 1.877443 CAAACGGAGTCCAAACGGAAT 59.123 47.619 10.49 0.00 45.00 3.01
2817 6589 1.519408 AACGGAGTCCAAACGGAATG 58.481 50.000 10.49 0.00 45.00 2.67
2818 6590 0.682852 ACGGAGTCCAAACGGAATGA 59.317 50.000 10.49 0.00 29.74 2.57
2819 6591 1.071071 ACGGAGTCCAAACGGAATGAA 59.929 47.619 10.49 0.00 29.74 2.57
2820 6592 2.147958 CGGAGTCCAAACGGAATGAAA 58.852 47.619 10.49 0.00 33.16 2.69
2821 6593 2.095919 CGGAGTCCAAACGGAATGAAAC 60.096 50.000 10.49 0.00 33.16 2.78
2822 6594 2.228103 GGAGTCCAAACGGAATGAAACC 59.772 50.000 3.60 0.00 33.16 3.27
2823 6595 3.146847 GAGTCCAAACGGAATGAAACCT 58.853 45.455 0.00 0.00 33.16 3.50
2824 6596 3.562182 AGTCCAAACGGAATGAAACCTT 58.438 40.909 0.00 0.00 33.16 3.50
2825 6597 3.568430 AGTCCAAACGGAATGAAACCTTC 59.432 43.478 0.00 0.00 33.16 3.46
2826 6598 2.550606 TCCAAACGGAATGAAACCTTCG 59.449 45.455 0.00 0.00 0.00 3.79
2827 6599 2.351350 CCAAACGGAATGAAACCTTCGG 60.351 50.000 0.00 0.00 0.00 4.30
2828 6600 1.530323 AACGGAATGAAACCTTCGGG 58.470 50.000 0.00 0.00 41.87 5.14
2829 6601 0.688487 ACGGAATGAAACCTTCGGGA 59.312 50.000 0.00 0.00 38.77 5.14
2830 6602 1.338769 ACGGAATGAAACCTTCGGGAG 60.339 52.381 0.00 0.00 38.77 4.30
2831 6603 1.066430 CGGAATGAAACCTTCGGGAGA 60.066 52.381 0.00 0.00 38.77 3.71
2832 6604 2.633488 GGAATGAAACCTTCGGGAGAG 58.367 52.381 0.00 0.00 41.75 3.20
2833 6605 2.027100 GGAATGAAACCTTCGGGAGAGT 60.027 50.000 0.00 0.00 41.75 3.24
2834 6606 3.559384 GGAATGAAACCTTCGGGAGAGTT 60.559 47.826 0.00 0.00 41.75 3.01
2835 6607 4.323257 GGAATGAAACCTTCGGGAGAGTTA 60.323 45.833 0.00 0.00 41.75 2.24
2836 6608 5.429130 GAATGAAACCTTCGGGAGAGTTAT 58.571 41.667 0.00 0.00 41.75 1.89
2837 6609 4.903045 TGAAACCTTCGGGAGAGTTATT 57.097 40.909 0.00 0.00 41.75 1.40
2838 6610 5.237236 TGAAACCTTCGGGAGAGTTATTT 57.763 39.130 0.00 0.00 41.75 1.40
2839 6611 5.627135 TGAAACCTTCGGGAGAGTTATTTT 58.373 37.500 0.00 0.00 41.75 1.82
2840 6612 6.066032 TGAAACCTTCGGGAGAGTTATTTTT 58.934 36.000 0.00 0.00 41.75 1.94
2841 6613 5.959618 AACCTTCGGGAGAGTTATTTTTG 57.040 39.130 0.00 0.00 41.75 2.44
2842 6614 4.332828 ACCTTCGGGAGAGTTATTTTTGG 58.667 43.478 0.00 0.00 41.75 3.28
2843 6615 4.042435 ACCTTCGGGAGAGTTATTTTTGGA 59.958 41.667 0.00 0.00 41.75 3.53
2844 6616 5.007682 CCTTCGGGAGAGTTATTTTTGGAA 58.992 41.667 0.00 0.00 41.75 3.53
2845 6617 5.106277 CCTTCGGGAGAGTTATTTTTGGAAC 60.106 44.000 0.00 0.00 41.75 3.62
2846 6618 4.975631 TCGGGAGAGTTATTTTTGGAACA 58.024 39.130 0.00 0.00 0.00 3.18
2847 6619 5.828859 TTCGGGAGAGTTATTTTTGGAACAA 59.171 36.000 0.00 0.00 42.84 2.83
2848 6620 6.321690 TTCGGGAGAGTTATTTTTGGAACAAA 59.678 34.615 0.00 0.00 42.84 2.83
2849 6621 7.682501 TTCGGGAGAGTTATTTTTGGAACAAAC 60.683 37.037 0.00 0.00 42.84 2.93
2860 6632 2.969443 GGAACAAACGTGATCCAGTG 57.031 50.000 0.00 0.00 44.27 3.66
2861 6633 1.535462 GGAACAAACGTGATCCAGTGG 59.465 52.381 1.40 1.40 44.27 4.00
2862 6634 2.489971 GAACAAACGTGATCCAGTGGA 58.510 47.619 15.88 15.88 35.55 4.02
2863 6635 1.878953 ACAAACGTGATCCAGTGGAC 58.121 50.000 15.86 9.34 32.98 4.02
2864 6636 1.416401 ACAAACGTGATCCAGTGGACT 59.584 47.619 15.86 3.72 32.98 3.85
2865 6637 2.158813 ACAAACGTGATCCAGTGGACTT 60.159 45.455 15.86 0.00 32.98 3.01
2866 6638 2.169832 AACGTGATCCAGTGGACTTG 57.830 50.000 15.86 7.49 32.98 3.16
2867 6639 0.321671 ACGTGATCCAGTGGACTTGG 59.678 55.000 15.86 7.29 32.98 3.61
2868 6640 0.608130 CGTGATCCAGTGGACTTGGA 59.392 55.000 15.86 0.00 32.98 3.53
2869 6641 1.404717 CGTGATCCAGTGGACTTGGAG 60.405 57.143 15.86 0.24 32.98 3.86
2870 6642 1.625818 GTGATCCAGTGGACTTGGAGT 59.374 52.381 15.86 0.00 32.98 3.85
2871 6643 2.832129 GTGATCCAGTGGACTTGGAGTA 59.168 50.000 15.86 0.00 32.98 2.59
2872 6644 3.099905 TGATCCAGTGGACTTGGAGTAG 58.900 50.000 15.86 0.00 32.98 2.57
2873 6645 2.992847 TCCAGTGGACTTGGAGTAGA 57.007 50.000 8.12 0.00 0.00 2.59
2874 6646 2.526432 TCCAGTGGACTTGGAGTAGAC 58.474 52.381 8.12 0.00 0.00 2.59
2875 6647 1.202582 CCAGTGGACTTGGAGTAGACG 59.797 57.143 1.68 0.00 0.00 4.18
2876 6648 1.887198 CAGTGGACTTGGAGTAGACGT 59.113 52.381 0.00 0.00 0.00 4.34
2877 6649 2.095161 CAGTGGACTTGGAGTAGACGTC 60.095 54.545 7.70 7.70 0.00 4.34
2878 6650 1.884579 GTGGACTTGGAGTAGACGTCA 59.115 52.381 19.50 0.48 0.00 4.35
2879 6651 2.295349 GTGGACTTGGAGTAGACGTCAA 59.705 50.000 19.50 1.33 0.00 3.18
2880 6652 2.557056 TGGACTTGGAGTAGACGTCAAG 59.443 50.000 19.50 14.00 41.46 3.02
2881 6653 2.818432 GGACTTGGAGTAGACGTCAAGA 59.182 50.000 19.50 0.00 38.96 3.02
2882 6654 3.255149 GGACTTGGAGTAGACGTCAAGAA 59.745 47.826 19.50 0.00 38.96 2.52
2883 6655 4.261909 GGACTTGGAGTAGACGTCAAGAAA 60.262 45.833 19.50 3.50 38.96 2.52
2884 6656 4.618965 ACTTGGAGTAGACGTCAAGAAAC 58.381 43.478 19.50 7.54 38.96 2.78
2886 6658 2.880268 TGGAGTAGACGTCAAGAAACGA 59.120 45.455 19.50 0.00 45.37 3.85
2887 6659 3.316029 TGGAGTAGACGTCAAGAAACGAA 59.684 43.478 19.50 0.00 45.37 3.85
2888 6660 3.667726 GGAGTAGACGTCAAGAAACGAAC 59.332 47.826 19.50 1.67 45.37 3.95
2889 6661 3.294943 AGTAGACGTCAAGAAACGAACG 58.705 45.455 19.50 0.00 45.37 3.95
2890 6662 2.480224 AGACGTCAAGAAACGAACGA 57.520 45.000 19.50 0.00 45.37 3.85
2891 6663 2.801063 AGACGTCAAGAAACGAACGAA 58.199 42.857 19.50 0.00 45.37 3.85
2892 6664 2.787680 AGACGTCAAGAAACGAACGAAG 59.212 45.455 19.50 0.00 45.37 3.79
2893 6665 2.785477 GACGTCAAGAAACGAACGAAGA 59.215 45.455 11.55 0.00 45.37 2.87
2894 6666 2.787680 ACGTCAAGAAACGAACGAAGAG 59.212 45.455 3.16 0.00 45.37 2.85
2895 6667 2.153247 CGTCAAGAAACGAACGAAGAGG 59.847 50.000 0.14 0.00 45.37 3.69
2896 6668 2.096860 GTCAAGAAACGAACGAAGAGGC 60.097 50.000 0.14 0.00 0.00 4.70
2897 6669 1.194772 CAAGAAACGAACGAAGAGGCC 59.805 52.381 0.00 0.00 0.00 5.19
2898 6670 0.391597 AGAAACGAACGAAGAGGCCA 59.608 50.000 5.01 0.00 0.00 5.36
2899 6671 0.511653 GAAACGAACGAAGAGGCCAC 59.488 55.000 5.01 0.00 0.00 5.01
2900 6672 1.219522 AAACGAACGAAGAGGCCACG 61.220 55.000 5.01 7.85 0.00 4.94
2901 6673 2.079020 AACGAACGAAGAGGCCACGA 62.079 55.000 5.01 0.00 0.00 4.35
2902 6674 1.801913 CGAACGAAGAGGCCACGAG 60.802 63.158 5.01 0.00 0.00 4.18
2903 6675 1.446272 GAACGAAGAGGCCACGAGG 60.446 63.158 5.01 0.00 38.23 4.63
2959 6731 3.528370 CTCGTGGGCCCCTCGTAG 61.528 72.222 27.56 20.91 40.72 3.51
2962 6734 3.851128 GTGGGCCCCTCGTAGCTC 61.851 72.222 22.27 0.00 0.00 4.09
2965 6737 3.851128 GGCCCCTCGTAGCTCCAC 61.851 72.222 0.00 0.00 0.00 4.02
2966 6738 3.851128 GCCCCTCGTAGCTCCACC 61.851 72.222 0.00 0.00 0.00 4.61
2967 6739 3.528370 CCCCTCGTAGCTCCACCG 61.528 72.222 0.00 0.00 0.00 4.94
2968 6740 2.439701 CCCTCGTAGCTCCACCGA 60.440 66.667 0.00 0.00 0.00 4.69
2969 6741 2.772691 CCCTCGTAGCTCCACCGAC 61.773 68.421 0.00 0.00 0.00 4.79
2970 6742 2.772691 CCTCGTAGCTCCACCGACC 61.773 68.421 0.00 0.00 0.00 4.79
2971 6743 1.749638 CTCGTAGCTCCACCGACCT 60.750 63.158 0.00 0.00 0.00 3.85
2972 6744 0.463295 CTCGTAGCTCCACCGACCTA 60.463 60.000 0.00 0.00 0.00 3.08
2973 6745 0.745845 TCGTAGCTCCACCGACCTAC 60.746 60.000 0.00 0.00 0.00 3.18
2974 6746 0.747283 CGTAGCTCCACCGACCTACT 60.747 60.000 0.00 0.00 28.60 2.57
2975 6747 1.472188 GTAGCTCCACCGACCTACTT 58.528 55.000 0.00 0.00 28.37 2.24
2976 6748 1.404748 GTAGCTCCACCGACCTACTTC 59.595 57.143 0.00 0.00 28.37 3.01
2977 6749 0.039911 AGCTCCACCGACCTACTTCT 59.960 55.000 0.00 0.00 0.00 2.85
2978 6750 0.896226 GCTCCACCGACCTACTTCTT 59.104 55.000 0.00 0.00 0.00 2.52
2979 6751 1.135053 GCTCCACCGACCTACTTCTTC 60.135 57.143 0.00 0.00 0.00 2.87
2980 6752 1.477295 CTCCACCGACCTACTTCTTCC 59.523 57.143 0.00 0.00 0.00 3.46
2981 6753 1.076677 TCCACCGACCTACTTCTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
2982 6754 1.477295 CCACCGACCTACTTCTTCCTC 59.523 57.143 0.00 0.00 0.00 3.71
2983 6755 1.477295 CACCGACCTACTTCTTCCTCC 59.523 57.143 0.00 0.00 0.00 4.30
2984 6756 1.358445 ACCGACCTACTTCTTCCTCCT 59.642 52.381 0.00 0.00 0.00 3.69
2985 6757 2.579860 ACCGACCTACTTCTTCCTCCTA 59.420 50.000 0.00 0.00 0.00 2.94
2986 6758 3.204831 ACCGACCTACTTCTTCCTCCTAT 59.795 47.826 0.00 0.00 0.00 2.57
2987 6759 4.414846 ACCGACCTACTTCTTCCTCCTATA 59.585 45.833 0.00 0.00 0.00 1.31
2988 6760 5.074790 ACCGACCTACTTCTTCCTCCTATAT 59.925 44.000 0.00 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 2.058675 CTTCAGTCAGGGTTCCGGT 58.941 57.895 0.00 0.00 0.00 5.28
137 138 1.376037 GCTTCAGTCAGGGTTCCGG 60.376 63.158 0.00 0.00 0.00 5.14
176 177 8.374327 AGTATACAACAACTAACAAACAGGAC 57.626 34.615 5.50 0.00 0.00 3.85
261 262 2.357517 GTGTCAGCCAGTCCCACG 60.358 66.667 0.00 0.00 0.00 4.94
333 340 1.538419 GGATACCCTTCTTCGCCTTCG 60.538 57.143 0.00 0.00 0.00 3.79
504 511 2.706555 GCCTCAGCTGTTACAAAACC 57.293 50.000 14.67 0.00 34.49 3.27
570 577 9.546909 CATCATCACATAGTTACAAACTTCAAC 57.453 33.333 0.00 0.00 42.81 3.18
574 581 8.846943 TCACATCATCACATAGTTACAAACTT 57.153 30.769 0.00 0.00 42.81 2.66
579 586 7.201723 GGCAAATCACATCATCACATAGTTACA 60.202 37.037 0.00 0.00 0.00 2.41
580 587 7.134815 GGCAAATCACATCATCACATAGTTAC 58.865 38.462 0.00 0.00 0.00 2.50
581 588 6.827762 TGGCAAATCACATCATCACATAGTTA 59.172 34.615 0.00 0.00 0.00 2.24
582 589 5.653330 TGGCAAATCACATCATCACATAGTT 59.347 36.000 0.00 0.00 0.00 2.24
583 590 5.066893 GTGGCAAATCACATCATCACATAGT 59.933 40.000 0.00 0.00 37.57 2.12
584 591 5.298527 AGTGGCAAATCACATCATCACATAG 59.701 40.000 0.00 0.00 39.93 2.23
585 592 5.195185 AGTGGCAAATCACATCATCACATA 58.805 37.500 0.00 0.00 39.93 2.29
586 593 4.021229 AGTGGCAAATCACATCATCACAT 58.979 39.130 0.00 0.00 39.93 3.21
587 594 3.423749 AGTGGCAAATCACATCATCACA 58.576 40.909 0.00 0.00 39.93 3.58
588 595 4.445452 AAGTGGCAAATCACATCATCAC 57.555 40.909 0.00 0.00 39.93 3.06
589 596 5.471556 AAAAGTGGCAAATCACATCATCA 57.528 34.783 0.00 0.00 39.93 3.07
590 597 6.532657 CCTAAAAAGTGGCAAATCACATCATC 59.467 38.462 0.00 0.00 39.93 2.92
591 598 6.211184 TCCTAAAAAGTGGCAAATCACATCAT 59.789 34.615 0.00 0.00 39.93 2.45
612 2316 5.717119 AGAAGAAACGTCGCTTAAATCCTA 58.283 37.500 3.21 0.00 0.00 2.94
618 2322 2.222445 GGCAAGAAGAAACGTCGCTTAA 59.778 45.455 3.21 0.00 0.00 1.85
622 2326 1.154654 CGGCAAGAAGAAACGTCGC 60.155 57.895 0.00 0.00 0.00 5.19
624 2328 2.904915 CTTTCGGCAAGAAGAAACGTC 58.095 47.619 0.00 0.00 40.40 4.34
630 2334 2.932663 CTGGCTTTCGGCAAGAAGA 58.067 52.632 0.00 0.00 44.58 2.87
634 2338 0.954452 AGTTTCTGGCTTTCGGCAAG 59.046 50.000 0.00 0.00 45.84 4.01
636 2340 1.795170 GCAGTTTCTGGCTTTCGGCA 61.795 55.000 0.00 0.00 44.01 5.69
637 2341 1.081175 GCAGTTTCTGGCTTTCGGC 60.081 57.895 0.00 0.00 40.90 5.54
639 2343 0.040067 GGTGCAGTTTCTGGCTTTCG 60.040 55.000 0.00 0.00 31.21 3.46
654 2358 4.566004 GGAATTTTTGGAAACTAGGGTGC 58.434 43.478 0.00 0.00 0.00 5.01
662 2366 9.203421 ACTTCATAATTCGGAATTTTTGGAAAC 57.797 29.630 20.04 0.00 32.38 2.78
736 4423 4.824479 TTCTATGATGAAGTGACTGGCA 57.176 40.909 0.00 0.00 0.00 4.92
737 4424 4.574013 CCTTTCTATGATGAAGTGACTGGC 59.426 45.833 0.00 0.00 0.00 4.85
738 4425 4.574013 GCCTTTCTATGATGAAGTGACTGG 59.426 45.833 0.00 0.00 0.00 4.00
787 4475 8.507249 CGTAAAAACAGGAATCAGATCTTTCTT 58.493 33.333 7.02 0.00 0.00 2.52
789 4477 8.029642 TCGTAAAAACAGGAATCAGATCTTTC 57.970 34.615 0.00 0.00 0.00 2.62
790 4478 7.878127 TCTCGTAAAAACAGGAATCAGATCTTT 59.122 33.333 0.00 0.00 0.00 2.52
791 4479 7.386851 TCTCGTAAAAACAGGAATCAGATCTT 58.613 34.615 0.00 0.00 0.00 2.40
792 4480 6.936279 TCTCGTAAAAACAGGAATCAGATCT 58.064 36.000 0.00 0.00 0.00 2.75
794 4482 7.979444 TTTCTCGTAAAAACAGGAATCAGAT 57.021 32.000 0.00 0.00 0.00 2.90
797 4485 8.215926 TCTTTTTCTCGTAAAAACAGGAATCA 57.784 30.769 6.95 0.00 0.00 2.57
801 4489 9.550406 TCTTATCTTTTTCTCGTAAAAACAGGA 57.450 29.630 6.95 5.01 0.00 3.86
805 4493 9.770503 GGGATCTTATCTTTTTCTCGTAAAAAC 57.229 33.333 6.95 0.00 0.00 2.43
806 4494 9.509956 TGGGATCTTATCTTTTTCTCGTAAAAA 57.490 29.630 9.62 9.62 0.00 1.94
807 4495 9.681062 ATGGGATCTTATCTTTTTCTCGTAAAA 57.319 29.630 0.00 0.00 0.00 1.52
808 4496 9.681062 AATGGGATCTTATCTTTTTCTCGTAAA 57.319 29.630 0.00 0.00 0.00 2.01
809 4497 9.326413 GAATGGGATCTTATCTTTTTCTCGTAA 57.674 33.333 0.00 0.00 0.00 3.18
810 4498 7.931948 GGAATGGGATCTTATCTTTTTCTCGTA 59.068 37.037 0.00 0.00 0.00 3.43
811 4499 6.768381 GGAATGGGATCTTATCTTTTTCTCGT 59.232 38.462 0.00 0.00 0.00 4.18
812 4500 6.767902 TGGAATGGGATCTTATCTTTTTCTCG 59.232 38.462 0.00 0.00 0.00 4.04
813 4501 7.230309 CCTGGAATGGGATCTTATCTTTTTCTC 59.770 40.741 0.00 0.00 0.00 2.87
814 4502 7.065504 CCTGGAATGGGATCTTATCTTTTTCT 58.934 38.462 0.00 0.00 0.00 2.52
815 4503 7.062957 TCCTGGAATGGGATCTTATCTTTTTC 58.937 38.462 0.00 0.00 0.00 2.29
816 4504 6.985225 TCCTGGAATGGGATCTTATCTTTTT 58.015 36.000 0.00 0.00 0.00 1.94
817 4505 6.596869 TCCTGGAATGGGATCTTATCTTTT 57.403 37.500 0.00 0.00 0.00 2.27
818 4506 6.068853 TGTTCCTGGAATGGGATCTTATCTTT 60.069 38.462 13.07 0.00 32.41 2.52
819 4507 5.433051 TGTTCCTGGAATGGGATCTTATCTT 59.567 40.000 13.07 0.00 32.41 2.40
820 4508 4.977739 TGTTCCTGGAATGGGATCTTATCT 59.022 41.667 13.07 0.00 32.41 1.98
821 4509 5.310409 TGTTCCTGGAATGGGATCTTATC 57.690 43.478 13.07 0.00 32.41 1.75
822 4510 5.732331 TTGTTCCTGGAATGGGATCTTAT 57.268 39.130 13.07 0.00 32.41 1.73
823 4511 5.528600 TTTGTTCCTGGAATGGGATCTTA 57.471 39.130 13.07 0.00 32.41 2.10
826 4514 4.958581 AGATTTTGTTCCTGGAATGGGATC 59.041 41.667 13.07 13.29 32.41 3.36
830 4518 5.726980 TTCAGATTTTGTTCCTGGAATGG 57.273 39.130 13.07 0.00 0.00 3.16
859 4547 4.747529 GGTGTGCCCGGTCCGTAC 62.748 72.222 11.06 7.04 0.00 3.67
1117 4818 2.196925 CCATCGCGTAGGAGGCTCT 61.197 63.158 15.23 3.10 0.00 4.09
1333 5066 2.360350 CACCAGGAAGTGCGGCAT 60.360 61.111 5.72 0.00 0.00 4.40
1568 5301 4.877323 AACTGTTGAACGGAAGAAAGTC 57.123 40.909 11.72 0.00 0.00 3.01
1579 5312 6.317857 GCATCAGATCCTAAAACTGTTGAAC 58.682 40.000 0.00 0.00 34.99 3.18
1684 5417 2.034879 CCAACGCACCCAGCTACAG 61.035 63.158 0.00 0.00 42.61 2.74
1753 5488 3.215151 TGACAAAACCGGTCTATGCAAA 58.785 40.909 8.04 0.00 36.26 3.68
1760 5495 3.553828 TTCTCTTGACAAAACCGGTCT 57.446 42.857 8.04 0.00 36.26 3.85
1761 5496 4.334481 TCTTTTCTCTTGACAAAACCGGTC 59.666 41.667 8.04 0.00 35.83 4.79
1819 5554 5.339177 CGTCCATATGCATAGACAGAGATC 58.661 45.833 20.13 0.00 0.00 2.75
1822 5557 3.507622 TCCGTCCATATGCATAGACAGAG 59.492 47.826 20.13 11.53 0.00 3.35
1830 5565 2.483714 GGCGATATCCGTCCATATGCAT 60.484 50.000 3.79 3.79 41.15 3.96
1841 5576 3.961477 TTCATTGTTTGGCGATATCCG 57.039 42.857 0.00 0.00 42.21 4.18
1845 5580 6.204688 GTGGATAGATTCATTGTTTGGCGATA 59.795 38.462 0.00 0.00 0.00 2.92
1866 5601 3.772572 TCAATCCTTACATTCGAGGTGGA 59.227 43.478 2.41 2.35 34.57 4.02
1867 5602 4.137116 TCAATCCTTACATTCGAGGTGG 57.863 45.455 2.41 0.00 34.57 4.61
1868 5603 6.683974 AATTCAATCCTTACATTCGAGGTG 57.316 37.500 2.41 0.70 34.57 4.00
1869 5604 6.884295 TCAAATTCAATCCTTACATTCGAGGT 59.116 34.615 0.00 0.00 34.57 3.85
1870 5605 7.148255 TGTCAAATTCAATCCTTACATTCGAGG 60.148 37.037 0.00 0.00 0.00 4.63
1871 5606 7.751732 TGTCAAATTCAATCCTTACATTCGAG 58.248 34.615 0.00 0.00 0.00 4.04
1872 5607 7.390440 ACTGTCAAATTCAATCCTTACATTCGA 59.610 33.333 0.00 0.00 0.00 3.71
1873 5608 7.482743 CACTGTCAAATTCAATCCTTACATTCG 59.517 37.037 0.00 0.00 0.00 3.34
1874 5609 8.514594 TCACTGTCAAATTCAATCCTTACATTC 58.485 33.333 0.00 0.00 0.00 2.67
1875 5610 8.299570 GTCACTGTCAAATTCAATCCTTACATT 58.700 33.333 0.00 0.00 0.00 2.71
1876 5611 7.667219 AGTCACTGTCAAATTCAATCCTTACAT 59.333 33.333 0.00 0.00 0.00 2.29
1877 5612 6.998074 AGTCACTGTCAAATTCAATCCTTACA 59.002 34.615 0.00 0.00 0.00 2.41
1878 5613 7.440523 AGTCACTGTCAAATTCAATCCTTAC 57.559 36.000 0.00 0.00 0.00 2.34
1879 5614 7.719193 TCAAGTCACTGTCAAATTCAATCCTTA 59.281 33.333 0.00 0.00 0.00 2.69
1880 5615 6.547141 TCAAGTCACTGTCAAATTCAATCCTT 59.453 34.615 0.00 0.00 0.00 3.36
1881 5616 6.064060 TCAAGTCACTGTCAAATTCAATCCT 58.936 36.000 0.00 0.00 0.00 3.24
1882 5617 6.317789 TCAAGTCACTGTCAAATTCAATCC 57.682 37.500 0.00 0.00 0.00 3.01
1883 5618 9.499585 CATATCAAGTCACTGTCAAATTCAATC 57.500 33.333 0.00 0.00 0.00 2.67
1884 5619 8.464404 CCATATCAAGTCACTGTCAAATTCAAT 58.536 33.333 0.00 0.00 0.00 2.57
1885 5620 7.448161 ACCATATCAAGTCACTGTCAAATTCAA 59.552 33.333 0.00 0.00 0.00 2.69
1886 5621 6.942005 ACCATATCAAGTCACTGTCAAATTCA 59.058 34.615 0.00 0.00 0.00 2.57
1887 5622 7.335422 AGACCATATCAAGTCACTGTCAAATTC 59.665 37.037 0.00 0.00 35.38 2.17
1888 5623 7.170965 AGACCATATCAAGTCACTGTCAAATT 58.829 34.615 0.00 0.00 35.38 1.82
1889 5624 6.715280 AGACCATATCAAGTCACTGTCAAAT 58.285 36.000 0.00 0.00 35.38 2.32
1890 5625 6.114187 AGACCATATCAAGTCACTGTCAAA 57.886 37.500 0.00 0.00 35.38 2.69
1891 5626 5.745312 AGACCATATCAAGTCACTGTCAA 57.255 39.130 0.00 0.00 35.38 3.18
1892 5627 5.745312 AAGACCATATCAAGTCACTGTCA 57.255 39.130 0.00 0.00 35.38 3.58
1893 5628 9.250624 GTTATAAGACCATATCAAGTCACTGTC 57.749 37.037 0.00 0.00 35.38 3.51
1894 5629 8.204836 GGTTATAAGACCATATCAAGTCACTGT 58.795 37.037 0.00 0.00 39.57 3.55
1895 5630 7.657761 GGGTTATAAGACCATATCAAGTCACTG 59.342 40.741 2.06 0.00 41.65 3.66
1896 5631 7.347222 TGGGTTATAAGACCATATCAAGTCACT 59.653 37.037 5.01 0.00 41.65 3.41
1897 5632 7.506114 TGGGTTATAAGACCATATCAAGTCAC 58.494 38.462 5.01 0.00 41.65 3.67
1898 5633 7.684317 TGGGTTATAAGACCATATCAAGTCA 57.316 36.000 5.01 0.00 41.65 3.41
1899 5634 7.607991 CCATGGGTTATAAGACCATATCAAGTC 59.392 40.741 17.07 0.00 42.85 3.01
1900 5635 7.073725 ACCATGGGTTATAAGACCATATCAAGT 59.926 37.037 18.09 9.78 42.85 3.16
1901 5636 7.391554 CACCATGGGTTATAAGACCATATCAAG 59.608 40.741 18.09 8.13 42.85 3.02
1902 5637 7.147213 ACACCATGGGTTATAAGACCATATCAA 60.147 37.037 18.09 0.00 42.85 2.57
1903 5638 6.331572 ACACCATGGGTTATAAGACCATATCA 59.668 38.462 18.09 0.00 42.85 2.15
1904 5639 6.779860 ACACCATGGGTTATAAGACCATATC 58.220 40.000 18.09 0.00 42.85 1.63
1905 5640 6.780198 ACACCATGGGTTATAAGACCATAT 57.220 37.500 18.09 9.10 42.85 1.78
1906 5641 6.584471 AACACCATGGGTTATAAGACCATA 57.416 37.500 18.09 0.00 42.85 2.74
1907 5642 5.466127 AACACCATGGGTTATAAGACCAT 57.534 39.130 18.09 13.40 45.48 3.55
1908 5643 4.938575 AACACCATGGGTTATAAGACCA 57.061 40.909 18.09 10.38 41.65 4.02
1909 5644 5.357032 CAGAAACACCATGGGTTATAAGACC 59.643 44.000 18.09 0.17 39.04 3.85
1910 5645 6.177610 TCAGAAACACCATGGGTTATAAGAC 58.822 40.000 18.09 6.12 31.02 3.01
1911 5646 6.012858 ACTCAGAAACACCATGGGTTATAAGA 60.013 38.462 18.09 11.67 31.02 2.10
1912 5647 6.094048 CACTCAGAAACACCATGGGTTATAAG 59.906 42.308 18.09 13.69 31.02 1.73
1913 5648 5.943416 CACTCAGAAACACCATGGGTTATAA 59.057 40.000 18.09 4.08 31.02 0.98
1914 5649 5.249622 TCACTCAGAAACACCATGGGTTATA 59.750 40.000 18.09 3.76 31.02 0.98
1915 5650 4.042809 TCACTCAGAAACACCATGGGTTAT 59.957 41.667 18.09 7.21 31.02 1.89
1916 5651 3.392947 TCACTCAGAAACACCATGGGTTA 59.607 43.478 18.09 1.92 31.02 2.85
1917 5652 2.174639 TCACTCAGAAACACCATGGGTT 59.825 45.455 18.09 14.24 31.02 4.11
1918 5653 1.774254 TCACTCAGAAACACCATGGGT 59.226 47.619 18.09 8.43 35.62 4.51
1919 5654 2.566833 TCACTCAGAAACACCATGGG 57.433 50.000 18.09 7.72 0.00 4.00
1928 5663 6.039717 CCTTCTCCATTTGTTTCACTCAGAAA 59.960 38.462 0.00 0.00 43.71 2.52
1929 5664 5.532406 CCTTCTCCATTTGTTTCACTCAGAA 59.468 40.000 0.00 0.00 0.00 3.02
1930 5665 5.065914 CCTTCTCCATTTGTTTCACTCAGA 58.934 41.667 0.00 0.00 0.00 3.27
1931 5666 4.823989 ACCTTCTCCATTTGTTTCACTCAG 59.176 41.667 0.00 0.00 0.00 3.35
1932 5667 4.580167 CACCTTCTCCATTTGTTTCACTCA 59.420 41.667 0.00 0.00 0.00 3.41
1933 5668 4.821805 TCACCTTCTCCATTTGTTTCACTC 59.178 41.667 0.00 0.00 0.00 3.51
1934 5669 4.580580 GTCACCTTCTCCATTTGTTTCACT 59.419 41.667 0.00 0.00 0.00 3.41
1935 5670 4.580580 AGTCACCTTCTCCATTTGTTTCAC 59.419 41.667 0.00 0.00 0.00 3.18
1936 5671 4.580167 CAGTCACCTTCTCCATTTGTTTCA 59.420 41.667 0.00 0.00 0.00 2.69
1937 5672 4.022849 CCAGTCACCTTCTCCATTTGTTTC 60.023 45.833 0.00 0.00 0.00 2.78
1938 5673 3.891366 CCAGTCACCTTCTCCATTTGTTT 59.109 43.478 0.00 0.00 0.00 2.83
1939 5674 3.117512 ACCAGTCACCTTCTCCATTTGTT 60.118 43.478 0.00 0.00 0.00 2.83
1940 5675 2.443255 ACCAGTCACCTTCTCCATTTGT 59.557 45.455 0.00 0.00 0.00 2.83
1941 5676 2.816087 CACCAGTCACCTTCTCCATTTG 59.184 50.000 0.00 0.00 0.00 2.32
1942 5677 2.224867 CCACCAGTCACCTTCTCCATTT 60.225 50.000 0.00 0.00 0.00 2.32
1943 5678 1.352352 CCACCAGTCACCTTCTCCATT 59.648 52.381 0.00 0.00 0.00 3.16
1944 5679 0.987294 CCACCAGTCACCTTCTCCAT 59.013 55.000 0.00 0.00 0.00 3.41
1945 5680 0.105194 TCCACCAGTCACCTTCTCCA 60.105 55.000 0.00 0.00 0.00 3.86
1946 5681 0.610687 CTCCACCAGTCACCTTCTCC 59.389 60.000 0.00 0.00 0.00 3.71
1947 5682 0.036858 GCTCCACCAGTCACCTTCTC 60.037 60.000 0.00 0.00 0.00 2.87
1948 5683 0.472734 AGCTCCACCAGTCACCTTCT 60.473 55.000 0.00 0.00 0.00 2.85
1949 5684 1.267121 TAGCTCCACCAGTCACCTTC 58.733 55.000 0.00 0.00 0.00 3.46
1950 5685 1.834263 GATAGCTCCACCAGTCACCTT 59.166 52.381 0.00 0.00 0.00 3.50
1951 5686 1.490574 GATAGCTCCACCAGTCACCT 58.509 55.000 0.00 0.00 0.00 4.00
1952 5687 0.103208 CGATAGCTCCACCAGTCACC 59.897 60.000 0.00 0.00 0.00 4.02
1953 5688 0.818296 ACGATAGCTCCACCAGTCAC 59.182 55.000 0.00 0.00 42.67 3.67
1954 5689 1.103803 GACGATAGCTCCACCAGTCA 58.896 55.000 0.00 0.00 42.67 3.41
1955 5690 1.103803 TGACGATAGCTCCACCAGTC 58.896 55.000 0.00 0.00 42.67 3.51
1956 5691 0.818296 GTGACGATAGCTCCACCAGT 59.182 55.000 0.00 0.00 42.67 4.00
1957 5692 1.107114 AGTGACGATAGCTCCACCAG 58.893 55.000 0.00 0.00 42.67 4.00
1958 5693 0.817654 CAGTGACGATAGCTCCACCA 59.182 55.000 0.00 0.00 42.67 4.17
1959 5694 0.103208 CCAGTGACGATAGCTCCACC 59.897 60.000 0.00 0.00 42.67 4.61
1960 5695 1.066303 CTCCAGTGACGATAGCTCCAC 59.934 57.143 0.00 0.00 42.67 4.02
1961 5696 1.064685 TCTCCAGTGACGATAGCTCCA 60.065 52.381 0.00 0.00 42.67 3.86
1962 5697 1.681538 TCTCCAGTGACGATAGCTCC 58.318 55.000 0.00 0.00 42.67 4.70
1963 5698 5.440234 TTATTCTCCAGTGACGATAGCTC 57.560 43.478 0.00 0.00 42.67 4.09
1964 5699 5.854010 TTTATTCTCCAGTGACGATAGCT 57.146 39.130 0.00 0.00 42.67 3.32
1965 5700 5.463724 CCTTTTATTCTCCAGTGACGATAGC 59.536 44.000 0.00 0.00 42.67 2.97
1966 5701 6.806751 TCCTTTTATTCTCCAGTGACGATAG 58.193 40.000 0.00 0.00 46.19 2.08
1967 5702 6.605995 TCTCCTTTTATTCTCCAGTGACGATA 59.394 38.462 0.00 0.00 0.00 2.92
1968 5703 5.422331 TCTCCTTTTATTCTCCAGTGACGAT 59.578 40.000 0.00 0.00 0.00 3.73
1969 5704 4.770531 TCTCCTTTTATTCTCCAGTGACGA 59.229 41.667 0.00 0.00 0.00 4.20
1970 5705 5.073311 TCTCCTTTTATTCTCCAGTGACG 57.927 43.478 0.00 0.00 0.00 4.35
1971 5706 5.819901 CCATCTCCTTTTATTCTCCAGTGAC 59.180 44.000 0.00 0.00 0.00 3.67
1972 5707 5.104360 CCCATCTCCTTTTATTCTCCAGTGA 60.104 44.000 0.00 0.00 0.00 3.41
1973 5708 5.128919 CCCATCTCCTTTTATTCTCCAGTG 58.871 45.833 0.00 0.00 0.00 3.66
1974 5709 4.166919 CCCCATCTCCTTTTATTCTCCAGT 59.833 45.833 0.00 0.00 0.00 4.00
1975 5710 4.446889 CCCCCATCTCCTTTTATTCTCCAG 60.447 50.000 0.00 0.00 0.00 3.86
1976 5711 3.463329 CCCCCATCTCCTTTTATTCTCCA 59.537 47.826 0.00 0.00 0.00 3.86
1977 5712 4.105754 CCCCCATCTCCTTTTATTCTCC 57.894 50.000 0.00 0.00 0.00 3.71
2014 5749 4.199672 GCCATCCCGGTAACCCCC 62.200 72.222 0.00 0.00 36.97 5.40
2015 5750 4.199672 GGCCATCCCGGTAACCCC 62.200 72.222 0.00 0.00 36.97 4.95
2016 5751 3.094498 AGGCCATCCCGGTAACCC 61.094 66.667 5.01 0.00 39.21 4.11
2017 5752 2.192175 CAGGCCATCCCGGTAACC 59.808 66.667 5.01 0.00 39.21 2.85
2018 5753 2.192175 CCAGGCCATCCCGGTAAC 59.808 66.667 5.01 0.00 39.21 2.50
2019 5754 3.093835 CCCAGGCCATCCCGGTAA 61.094 66.667 5.01 0.00 39.21 2.85
2042 5777 3.419759 GTACAACGGCTGGCCACG 61.420 66.667 13.76 13.76 35.37 4.94
2043 5778 1.448922 TTTGTACAACGGCTGGCCAC 61.449 55.000 8.07 0.00 35.37 5.01
2044 5779 1.152943 TTTGTACAACGGCTGGCCA 60.153 52.632 8.07 4.71 35.37 5.36
2045 5780 0.887387 TCTTTGTACAACGGCTGGCC 60.887 55.000 8.07 0.00 0.00 5.36
2059 5794 8.507249 ACTTTATTCAATCTTTCGTCCTCTTTG 58.493 33.333 0.00 0.00 0.00 2.77
2060 5795 8.622948 ACTTTATTCAATCTTTCGTCCTCTTT 57.377 30.769 0.00 0.00 0.00 2.52
2101 5837 2.053747 TCTGGGACCAACCACCTATT 57.946 50.000 0.00 0.00 41.20 1.73
2157 5893 3.456644 TCCTTCCTCTCGACATAGTCTCT 59.543 47.826 0.00 0.00 0.00 3.10
2159 5895 3.456644 TCTCCTTCCTCTCGACATAGTCT 59.543 47.826 0.00 0.00 0.00 3.24
2162 5898 4.824537 TGAATCTCCTTCCTCTCGACATAG 59.175 45.833 0.00 0.00 32.49 2.23
2168 5904 3.194062 GCTTTGAATCTCCTTCCTCTCG 58.806 50.000 0.00 0.00 32.49 4.04
2203 5939 8.260114 CCTTCTGGCAACCATTAGATTAAAATT 58.740 33.333 0.00 0.00 30.82 1.82
2247 5983 8.974408 ACAAACAACAAGAACAAGTTAAGTTTC 58.026 29.630 0.00 0.00 27.90 2.78
2264 6000 4.142271 GGTCATCTTTGGTCACAAACAACA 60.142 41.667 0.00 0.00 41.42 3.33
2271 6007 1.774254 AGGTGGTCATCTTTGGTCACA 59.226 47.619 0.00 0.00 32.00 3.58
2276 6012 5.688807 AGATTATCAGGTGGTCATCTTTGG 58.311 41.667 0.00 0.00 0.00 3.28
2300 6051 5.473039 GTTGCATAGTCATTCTTTTTGCCT 58.527 37.500 0.00 0.00 0.00 4.75
2308 6059 5.939764 TCTGTAGGTTGCATAGTCATTCT 57.060 39.130 0.00 0.00 0.00 2.40
2416 6177 4.026052 CCAGCCCAGGTTTCTTTTCATAT 58.974 43.478 0.00 0.00 0.00 1.78
2419 6180 1.703411 CCAGCCCAGGTTTCTTTTCA 58.297 50.000 0.00 0.00 0.00 2.69
2440 6201 1.890876 TATCAACTGCGTTGTGGCTT 58.109 45.000 16.97 5.63 43.23 4.35
2450 6211 6.844696 TTAGGTCGATTTGATATCAACTGC 57.155 37.500 17.76 9.05 35.28 4.40
2460 6221 7.283580 TGTTTCCTTTCTTTTAGGTCGATTTGA 59.716 33.333 0.00 0.00 34.29 2.69
2462 6223 7.067737 TGTGTTTCCTTTCTTTTAGGTCGATTT 59.932 33.333 0.00 0.00 34.29 2.17
2464 6225 6.017357 GTGTGTTTCCTTTCTTTTAGGTCGAT 60.017 38.462 0.00 0.00 34.29 3.59
2475 6236 2.241176 TGGACTGGTGTGTTTCCTTTCT 59.759 45.455 0.00 0.00 0.00 2.52
2476 6237 2.618709 CTGGACTGGTGTGTTTCCTTTC 59.381 50.000 0.00 0.00 0.00 2.62
2521 6286 5.683681 TGGCTATGAATCTGTTTGCTCATA 58.316 37.500 0.00 0.00 31.20 2.15
2524 6289 5.511234 AATGGCTATGAATCTGTTTGCTC 57.489 39.130 0.00 0.00 0.00 4.26
2664 6436 9.474313 AGCCTATTAAACATCCAAAACAGAATA 57.526 29.630 0.00 0.00 0.00 1.75
2665 6437 8.366359 AGCCTATTAAACATCCAAAACAGAAT 57.634 30.769 0.00 0.00 0.00 2.40
2666 6438 7.775053 AGCCTATTAAACATCCAAAACAGAA 57.225 32.000 0.00 0.00 0.00 3.02
2667 6439 7.775053 AAGCCTATTAAACATCCAAAACAGA 57.225 32.000 0.00 0.00 0.00 3.41
2708 6480 9.690913 GGTTAGTAGGTTAGTCCCAAAAATAAT 57.309 33.333 0.00 0.00 36.75 1.28
2709 6481 8.108999 GGGTTAGTAGGTTAGTCCCAAAAATAA 58.891 37.037 0.00 0.00 36.75 1.40
2710 6482 7.239353 TGGGTTAGTAGGTTAGTCCCAAAAATA 59.761 37.037 0.00 0.00 40.14 1.40
2711 6483 6.045813 TGGGTTAGTAGGTTAGTCCCAAAAAT 59.954 38.462 0.00 0.00 40.14 1.82
2712 6484 5.372066 TGGGTTAGTAGGTTAGTCCCAAAAA 59.628 40.000 0.00 0.00 40.14 1.94
2713 6485 4.912744 TGGGTTAGTAGGTTAGTCCCAAAA 59.087 41.667 0.00 0.00 40.14 2.44
2714 6486 4.501433 TGGGTTAGTAGGTTAGTCCCAAA 58.499 43.478 0.00 0.00 40.14 3.28
2715 6487 4.144825 TGGGTTAGTAGGTTAGTCCCAA 57.855 45.455 0.00 0.00 40.14 4.12
2716 6488 3.850917 TGGGTTAGTAGGTTAGTCCCA 57.149 47.619 0.00 0.00 40.70 4.37
2717 6489 3.453717 CCTTGGGTTAGTAGGTTAGTCCC 59.546 52.174 0.00 0.00 36.75 4.46
2718 6490 3.118482 GCCTTGGGTTAGTAGGTTAGTCC 60.118 52.174 0.00 0.00 0.00 3.85
2719 6491 3.118482 GGCCTTGGGTTAGTAGGTTAGTC 60.118 52.174 0.00 0.00 0.00 2.59
2720 6492 2.842496 GGCCTTGGGTTAGTAGGTTAGT 59.158 50.000 0.00 0.00 0.00 2.24
2721 6493 2.172082 GGGCCTTGGGTTAGTAGGTTAG 59.828 54.545 0.84 0.00 0.00 2.34
2722 6494 2.199208 GGGCCTTGGGTTAGTAGGTTA 58.801 52.381 0.84 0.00 0.00 2.85
2723 6495 0.997363 GGGCCTTGGGTTAGTAGGTT 59.003 55.000 0.84 0.00 0.00 3.50
2724 6496 0.178855 TGGGCCTTGGGTTAGTAGGT 60.179 55.000 4.53 0.00 0.00 3.08
2725 6497 0.546598 CTGGGCCTTGGGTTAGTAGG 59.453 60.000 4.53 0.00 0.00 3.18
2726 6498 1.065418 CACTGGGCCTTGGGTTAGTAG 60.065 57.143 4.53 0.00 0.00 2.57
2727 6499 0.988832 CACTGGGCCTTGGGTTAGTA 59.011 55.000 4.53 0.00 0.00 1.82
2728 6500 1.767692 CACTGGGCCTTGGGTTAGT 59.232 57.895 4.53 0.00 0.00 2.24
2729 6501 1.678970 GCACTGGGCCTTGGGTTAG 60.679 63.158 4.53 0.00 36.11 2.34
2730 6502 2.012824 TTGCACTGGGCCTTGGGTTA 62.013 55.000 4.53 0.00 43.89 2.85
2731 6503 2.887738 TTTGCACTGGGCCTTGGGTT 62.888 55.000 4.53 0.00 43.89 4.11
2732 6504 2.677968 ATTTGCACTGGGCCTTGGGT 62.678 55.000 4.53 0.00 43.89 4.51
2733 6505 1.482748 AATTTGCACTGGGCCTTGGG 61.483 55.000 4.53 0.00 43.89 4.12
2734 6506 0.320946 CAATTTGCACTGGGCCTTGG 60.321 55.000 4.53 0.00 43.89 3.61
2735 6507 0.393820 ACAATTTGCACTGGGCCTTG 59.606 50.000 4.53 2.84 43.89 3.61
2736 6508 1.130777 AACAATTTGCACTGGGCCTT 58.869 45.000 4.53 0.00 43.89 4.35
2737 6509 0.393820 CAACAATTTGCACTGGGCCT 59.606 50.000 4.53 0.00 43.89 5.19
2738 6510 0.106521 ACAACAATTTGCACTGGGCC 59.893 50.000 0.00 0.00 43.89 5.80
2739 6511 1.952193 AACAACAATTTGCACTGGGC 58.048 45.000 0.00 0.00 45.13 5.36
2740 6512 4.961435 AAAAACAACAATTTGCACTGGG 57.039 36.364 0.00 0.00 36.00 4.45
2759 6531 5.897050 ACGAAACACTGAAATAGGCAAAAA 58.103 33.333 0.00 0.00 0.00 1.94
2760 6532 5.508200 ACGAAACACTGAAATAGGCAAAA 57.492 34.783 0.00 0.00 0.00 2.44
2761 6533 5.992829 TCTACGAAACACTGAAATAGGCAAA 59.007 36.000 0.00 0.00 0.00 3.68
2762 6534 5.543714 TCTACGAAACACTGAAATAGGCAA 58.456 37.500 0.00 0.00 0.00 4.52
2763 6535 5.142061 TCTACGAAACACTGAAATAGGCA 57.858 39.130 0.00 0.00 0.00 4.75
2764 6536 6.476243 TTTCTACGAAACACTGAAATAGGC 57.524 37.500 0.00 0.00 0.00 3.93
2765 6537 7.386848 TCCTTTTCTACGAAACACTGAAATAGG 59.613 37.037 0.00 0.00 32.66 2.57
2766 6538 8.306680 TCCTTTTCTACGAAACACTGAAATAG 57.693 34.615 0.00 0.00 0.00 1.73
2767 6539 8.665643 TTCCTTTTCTACGAAACACTGAAATA 57.334 30.769 0.00 0.00 0.00 1.40
2768 6540 7.562454 TTCCTTTTCTACGAAACACTGAAAT 57.438 32.000 0.00 0.00 0.00 2.17
2769 6541 6.988622 TTCCTTTTCTACGAAACACTGAAA 57.011 33.333 0.00 0.00 0.00 2.69
2770 6542 8.842358 ATATTCCTTTTCTACGAAACACTGAA 57.158 30.769 0.00 0.00 0.00 3.02
2771 6543 8.092068 TGATATTCCTTTTCTACGAAACACTGA 58.908 33.333 0.00 0.00 0.00 3.41
2772 6544 8.251750 TGATATTCCTTTTCTACGAAACACTG 57.748 34.615 0.00 0.00 0.00 3.66
2773 6545 8.842358 TTGATATTCCTTTTCTACGAAACACT 57.158 30.769 0.00 0.00 0.00 3.55
2774 6546 9.326339 GTTTGATATTCCTTTTCTACGAAACAC 57.674 33.333 0.00 0.00 0.00 3.32
2775 6547 8.225107 CGTTTGATATTCCTTTTCTACGAAACA 58.775 33.333 0.00 0.00 0.00 2.83
2776 6548 7.691050 CCGTTTGATATTCCTTTTCTACGAAAC 59.309 37.037 0.00 0.00 0.00 2.78
2777 6549 7.603404 TCCGTTTGATATTCCTTTTCTACGAAA 59.397 33.333 0.00 0.00 0.00 3.46
2778 6550 7.098477 TCCGTTTGATATTCCTTTTCTACGAA 58.902 34.615 0.00 0.00 0.00 3.85
2779 6551 6.632909 TCCGTTTGATATTCCTTTTCTACGA 58.367 36.000 0.00 0.00 0.00 3.43
2780 6552 6.534079 ACTCCGTTTGATATTCCTTTTCTACG 59.466 38.462 0.00 0.00 0.00 3.51
2781 6553 7.011202 GGACTCCGTTTGATATTCCTTTTCTAC 59.989 40.741 0.00 0.00 0.00 2.59
2782 6554 7.046033 GGACTCCGTTTGATATTCCTTTTCTA 58.954 38.462 0.00 0.00 0.00 2.10
2783 6555 5.880887 GGACTCCGTTTGATATTCCTTTTCT 59.119 40.000 0.00 0.00 0.00 2.52
2784 6556 5.646360 TGGACTCCGTTTGATATTCCTTTTC 59.354 40.000 0.00 0.00 0.00 2.29
2785 6557 5.566469 TGGACTCCGTTTGATATTCCTTTT 58.434 37.500 0.00 0.00 0.00 2.27
2786 6558 5.174037 TGGACTCCGTTTGATATTCCTTT 57.826 39.130 0.00 0.00 0.00 3.11
2787 6559 4.837093 TGGACTCCGTTTGATATTCCTT 57.163 40.909 0.00 0.00 0.00 3.36
2788 6560 4.837093 TTGGACTCCGTTTGATATTCCT 57.163 40.909 0.00 0.00 0.00 3.36
2789 6561 4.201783 CGTTTGGACTCCGTTTGATATTCC 60.202 45.833 0.00 0.00 0.00 3.01
2790 6562 4.201783 CCGTTTGGACTCCGTTTGATATTC 60.202 45.833 0.00 0.00 37.49 1.75
2791 6563 3.687698 CCGTTTGGACTCCGTTTGATATT 59.312 43.478 0.00 0.00 37.49 1.28
2792 6564 3.055675 TCCGTTTGGACTCCGTTTGATAT 60.056 43.478 0.00 0.00 40.17 1.63
2793 6565 2.299582 TCCGTTTGGACTCCGTTTGATA 59.700 45.455 0.00 0.00 40.17 2.15
2794 6566 1.071071 TCCGTTTGGACTCCGTTTGAT 59.929 47.619 0.00 0.00 40.17 2.57
2795 6567 0.464870 TCCGTTTGGACTCCGTTTGA 59.535 50.000 0.00 0.00 40.17 2.69
2796 6568 1.301423 TTCCGTTTGGACTCCGTTTG 58.699 50.000 0.00 0.00 46.45 2.93
2797 6569 1.877443 CATTCCGTTTGGACTCCGTTT 59.123 47.619 0.00 0.00 46.45 3.60
2798 6570 1.071071 TCATTCCGTTTGGACTCCGTT 59.929 47.619 0.00 0.00 46.45 4.44
2799 6571 0.682852 TCATTCCGTTTGGACTCCGT 59.317 50.000 0.00 0.00 46.45 4.69
2800 6572 1.803334 TTCATTCCGTTTGGACTCCG 58.197 50.000 0.00 0.00 46.45 4.63
2801 6573 2.228103 GGTTTCATTCCGTTTGGACTCC 59.772 50.000 0.00 0.00 46.45 3.85
2802 6574 3.146847 AGGTTTCATTCCGTTTGGACTC 58.853 45.455 0.00 0.00 46.45 3.36
2803 6575 3.223674 AGGTTTCATTCCGTTTGGACT 57.776 42.857 0.00 0.00 46.45 3.85
2804 6576 3.608474 CGAAGGTTTCATTCCGTTTGGAC 60.608 47.826 0.00 0.00 46.45 4.02
2805 6577 2.550606 CGAAGGTTTCATTCCGTTTGGA 59.449 45.455 0.00 0.00 44.61 3.53
2806 6578 2.928694 CGAAGGTTTCATTCCGTTTGG 58.071 47.619 0.00 0.00 0.00 3.28
2822 6594 5.472137 TGTTCCAAAAATAACTCTCCCGAAG 59.528 40.000 0.00 0.00 0.00 3.79
2823 6595 5.378332 TGTTCCAAAAATAACTCTCCCGAA 58.622 37.500 0.00 0.00 0.00 4.30
2824 6596 4.975631 TGTTCCAAAAATAACTCTCCCGA 58.024 39.130 0.00 0.00 0.00 5.14
2825 6597 5.699097 TTGTTCCAAAAATAACTCTCCCG 57.301 39.130 0.00 0.00 0.00 5.14
2826 6598 5.918576 CGTTTGTTCCAAAAATAACTCTCCC 59.081 40.000 0.00 0.00 0.00 4.30
2827 6599 6.416750 CACGTTTGTTCCAAAAATAACTCTCC 59.583 38.462 0.00 0.00 0.00 3.71
2828 6600 7.190871 TCACGTTTGTTCCAAAAATAACTCTC 58.809 34.615 0.00 0.00 0.00 3.20
2829 6601 7.090953 TCACGTTTGTTCCAAAAATAACTCT 57.909 32.000 0.00 0.00 0.00 3.24
2830 6602 7.114388 GGATCACGTTTGTTCCAAAAATAACTC 59.886 37.037 0.00 0.00 40.26 3.01
2831 6603 6.921307 GGATCACGTTTGTTCCAAAAATAACT 59.079 34.615 0.00 0.00 40.26 2.24
2832 6604 6.697892 TGGATCACGTTTGTTCCAAAAATAAC 59.302 34.615 3.91 0.00 45.09 1.89
2833 6605 6.806751 TGGATCACGTTTGTTCCAAAAATAA 58.193 32.000 3.91 0.00 45.09 1.40
2834 6606 6.039941 ACTGGATCACGTTTGTTCCAAAAATA 59.960 34.615 7.12 0.00 46.56 1.40
2835 6607 5.163457 ACTGGATCACGTTTGTTCCAAAAAT 60.163 36.000 7.12 0.00 46.56 1.82
2836 6608 4.158764 ACTGGATCACGTTTGTTCCAAAAA 59.841 37.500 7.12 0.00 46.56 1.94
2837 6609 3.697045 ACTGGATCACGTTTGTTCCAAAA 59.303 39.130 7.12 0.00 46.56 2.44
2838 6610 3.066064 CACTGGATCACGTTTGTTCCAAA 59.934 43.478 7.12 0.00 46.56 3.28
2839 6611 2.616376 CACTGGATCACGTTTGTTCCAA 59.384 45.455 7.12 0.00 46.56 3.53
2840 6612 2.217750 CACTGGATCACGTTTGTTCCA 58.782 47.619 5.88 5.88 45.62 3.53
2841 6613 1.535462 CCACTGGATCACGTTTGTTCC 59.465 52.381 0.00 0.00 40.74 3.62
2842 6614 2.223377 GTCCACTGGATCACGTTTGTTC 59.777 50.000 0.00 0.00 32.73 3.18
2843 6615 2.158813 AGTCCACTGGATCACGTTTGTT 60.159 45.455 0.00 0.00 32.73 2.83
2844 6616 1.416401 AGTCCACTGGATCACGTTTGT 59.584 47.619 0.00 0.00 32.73 2.83
2845 6617 2.169832 AGTCCACTGGATCACGTTTG 57.830 50.000 0.00 0.00 32.73 2.93
2846 6618 2.494059 CAAGTCCACTGGATCACGTTT 58.506 47.619 0.00 0.00 32.73 3.60
2847 6619 1.270839 CCAAGTCCACTGGATCACGTT 60.271 52.381 0.00 0.00 32.73 3.99
2848 6620 0.321671 CCAAGTCCACTGGATCACGT 59.678 55.000 0.00 0.00 32.73 4.49
2849 6621 0.608130 TCCAAGTCCACTGGATCACG 59.392 55.000 0.00 0.00 32.73 4.35
2850 6622 1.625818 ACTCCAAGTCCACTGGATCAC 59.374 52.381 0.00 0.00 32.73 3.06
2851 6623 2.030027 ACTCCAAGTCCACTGGATCA 57.970 50.000 0.00 0.00 32.73 2.92
2852 6624 3.131400 GTCTACTCCAAGTCCACTGGATC 59.869 52.174 0.00 0.00 32.73 3.36
2853 6625 3.100671 GTCTACTCCAAGTCCACTGGAT 58.899 50.000 0.00 0.00 32.73 3.41
2854 6626 2.526432 GTCTACTCCAAGTCCACTGGA 58.474 52.381 0.00 0.00 0.00 3.86
2855 6627 1.202582 CGTCTACTCCAAGTCCACTGG 59.797 57.143 0.00 0.00 0.00 4.00
2856 6628 1.887198 ACGTCTACTCCAAGTCCACTG 59.113 52.381 0.00 0.00 0.00 3.66
2857 6629 2.161030 GACGTCTACTCCAAGTCCACT 58.839 52.381 8.70 0.00 0.00 4.00
2858 6630 1.884579 TGACGTCTACTCCAAGTCCAC 59.115 52.381 17.92 0.00 0.00 4.02
2859 6631 2.281539 TGACGTCTACTCCAAGTCCA 57.718 50.000 17.92 0.00 0.00 4.02
2860 6632 2.818432 TCTTGACGTCTACTCCAAGTCC 59.182 50.000 17.92 0.00 37.74 3.85
2861 6633 4.500603 TTCTTGACGTCTACTCCAAGTC 57.499 45.455 17.92 0.00 37.74 3.01
2862 6634 4.618965 GTTTCTTGACGTCTACTCCAAGT 58.381 43.478 17.92 0.00 37.74 3.16
2863 6635 3.669122 CGTTTCTTGACGTCTACTCCAAG 59.331 47.826 17.92 11.29 38.19 3.61
2864 6636 3.316029 TCGTTTCTTGACGTCTACTCCAA 59.684 43.478 17.92 0.75 43.23 3.53
2865 6637 2.880268 TCGTTTCTTGACGTCTACTCCA 59.120 45.455 17.92 0.00 43.23 3.86
2866 6638 3.549299 TCGTTTCTTGACGTCTACTCC 57.451 47.619 17.92 0.00 43.23 3.85
2867 6639 3.357240 CGTTCGTTTCTTGACGTCTACTC 59.643 47.826 17.92 1.99 43.23 2.59
2868 6640 3.002656 TCGTTCGTTTCTTGACGTCTACT 59.997 43.478 17.92 0.00 43.23 2.57
2869 6641 3.291585 TCGTTCGTTTCTTGACGTCTAC 58.708 45.455 17.92 6.24 43.23 2.59
2870 6642 3.607422 TCGTTCGTTTCTTGACGTCTA 57.393 42.857 17.92 8.49 43.23 2.59
2871 6643 2.480224 TCGTTCGTTTCTTGACGTCT 57.520 45.000 17.92 0.00 43.23 4.18
2872 6644 2.785477 TCTTCGTTCGTTTCTTGACGTC 59.215 45.455 9.11 9.11 43.23 4.34
2873 6645 2.787680 CTCTTCGTTCGTTTCTTGACGT 59.212 45.455 0.00 0.00 43.23 4.34
2874 6646 2.153247 CCTCTTCGTTCGTTTCTTGACG 59.847 50.000 0.00 0.00 44.06 4.35
2875 6647 2.096860 GCCTCTTCGTTCGTTTCTTGAC 60.097 50.000 0.00 0.00 0.00 3.18
2876 6648 2.132762 GCCTCTTCGTTCGTTTCTTGA 58.867 47.619 0.00 0.00 0.00 3.02
2877 6649 1.194772 GGCCTCTTCGTTCGTTTCTTG 59.805 52.381 0.00 0.00 0.00 3.02
2878 6650 1.202604 TGGCCTCTTCGTTCGTTTCTT 60.203 47.619 3.32 0.00 0.00 2.52
2879 6651 0.391597 TGGCCTCTTCGTTCGTTTCT 59.608 50.000 3.32 0.00 0.00 2.52
2880 6652 0.511653 GTGGCCTCTTCGTTCGTTTC 59.488 55.000 3.32 0.00 0.00 2.78
2881 6653 1.219522 CGTGGCCTCTTCGTTCGTTT 61.220 55.000 3.32 0.00 0.00 3.60
2882 6654 1.663702 CGTGGCCTCTTCGTTCGTT 60.664 57.895 3.32 0.00 0.00 3.85
2883 6655 2.049433 CGTGGCCTCTTCGTTCGT 60.049 61.111 3.32 0.00 0.00 3.85
2884 6656 1.801913 CTCGTGGCCTCTTCGTTCG 60.802 63.158 3.32 0.00 0.00 3.95
2885 6657 1.446272 CCTCGTGGCCTCTTCGTTC 60.446 63.158 3.32 0.00 0.00 3.95
2886 6658 2.657237 CCTCGTGGCCTCTTCGTT 59.343 61.111 3.32 0.00 0.00 3.85
2942 6714 3.528370 CTACGAGGGGCCCACGAG 61.528 72.222 42.25 30.09 39.84 4.18
2945 6717 3.851128 GAGCTACGAGGGGCCCAC 61.851 72.222 27.72 19.04 0.00 4.61
2948 6720 3.851128 GTGGAGCTACGAGGGGCC 61.851 72.222 0.00 0.00 0.00 5.80
2949 6721 3.851128 GGTGGAGCTACGAGGGGC 61.851 72.222 0.00 0.00 0.00 5.80
2950 6722 3.528370 CGGTGGAGCTACGAGGGG 61.528 72.222 0.00 0.00 0.00 4.79
2951 6723 2.439701 TCGGTGGAGCTACGAGGG 60.440 66.667 0.00 0.00 32.29 4.30
2952 6724 2.772691 GGTCGGTGGAGCTACGAGG 61.773 68.421 0.00 0.00 37.30 4.63
2953 6725 2.799371 GGTCGGTGGAGCTACGAG 59.201 66.667 0.00 0.00 37.30 4.18
2959 6731 0.896226 AAGAAGTAGGTCGGTGGAGC 59.104 55.000 0.00 0.00 40.99 4.70
2960 6732 1.477295 GGAAGAAGTAGGTCGGTGGAG 59.523 57.143 0.00 0.00 0.00 3.86
2961 6733 1.076677 AGGAAGAAGTAGGTCGGTGGA 59.923 52.381 0.00 0.00 0.00 4.02
2962 6734 1.477295 GAGGAAGAAGTAGGTCGGTGG 59.523 57.143 0.00 0.00 0.00 4.61
2963 6735 1.477295 GGAGGAAGAAGTAGGTCGGTG 59.523 57.143 0.00 0.00 0.00 4.94
2964 6736 1.358445 AGGAGGAAGAAGTAGGTCGGT 59.642 52.381 0.00 0.00 0.00 4.69
2965 6737 2.146920 AGGAGGAAGAAGTAGGTCGG 57.853 55.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.