Multiple sequence alignment - TraesCS6D01G127200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G127200 chr6D 100.000 5581 0 0 1 5581 91040697 91046277 0.000000e+00 10307.0
1 TraesCS6D01G127200 chr6A 92.908 2087 85 24 2967 5023 109384992 109387045 0.000000e+00 2976.0
2 TraesCS6D01G127200 chr6A 94.005 1935 80 18 869 2778 109382793 109384716 0.000000e+00 2898.0
3 TraesCS6D01G127200 chr6A 96.422 559 11 5 189 746 109381996 109382546 0.000000e+00 913.0
4 TraesCS6D01G127200 chr6A 90.881 318 19 5 5266 5576 109388935 109389249 8.650000e-113 418.0
5 TraesCS6D01G127200 chr6B 94.118 1632 55 18 1158 2778 173573712 173575313 0.000000e+00 2444.0
6 TraesCS6D01G127200 chr6B 93.601 1172 55 11 3959 5129 173577028 173578180 0.000000e+00 1731.0
7 TraesCS6D01G127200 chr6B 95.267 972 24 4 2971 3925 173575592 173576558 0.000000e+00 1520.0
8 TraesCS6D01G127200 chr6B 93.630 989 29 14 216 1190 173572728 173573696 0.000000e+00 1447.0
9 TraesCS6D01G127200 chr6B 90.972 288 15 6 5274 5553 173580268 173580552 1.470000e-100 377.0
10 TraesCS6D01G127200 chr6B 81.081 74 12 1 11 82 27890707 27890634 2.170000e-04 58.4
11 TraesCS6D01G127200 chr7A 82.270 141 19 5 4430 4567 653543392 653543255 3.530000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G127200 chr6D 91040697 91046277 5580 False 10307.00 10307 100.0000 1 5581 1 chr6D.!!$F1 5580
1 TraesCS6D01G127200 chr6A 109381996 109389249 7253 False 1801.25 2976 93.5540 189 5576 4 chr6A.!!$F1 5387
2 TraesCS6D01G127200 chr6B 173572728 173580552 7824 False 1503.80 2444 93.5176 216 5553 5 chr6B.!!$F1 5337

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
132 133 0.036306 ACGGATTGTTCCCTGTCCAC 59.964 55.000 0.00 0.00 39.01 4.02 F
1284 1477 0.033109 GATAGGGGTTGCCAAGGCTT 60.033 55.000 12.96 0.00 42.51 4.35 F
1316 1509 0.175760 TCTACATTCTGTCGGCAGCC 59.824 55.000 13.43 0.00 42.29 4.85 F
2238 2443 1.135083 ACAATAGCGACCTTGGAGACG 60.135 52.381 0.00 0.00 0.00 4.18 F
2901 3366 1.135527 TCTGGCCGGTACAGATAAACG 59.864 52.381 21.97 2.05 39.87 3.60 F
3960 4883 0.595095 CTCTTGCAGGTCAAAGGTGC 59.405 55.000 0.00 0.00 37.73 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1470 1663 0.040499 GGCCCCAATTGTGGTAAGGA 59.960 55.000 8.84 0.00 44.30 3.36 R
2238 2443 0.818296 TTCTAGCAGCCGAGAGTTCC 59.182 55.000 0.00 0.00 0.00 3.62 R
2881 3346 1.135527 CGTTTATCTGTACCGGCCAGA 59.864 52.381 22.47 22.47 42.74 3.86 R
3643 4120 0.518636 AATGACAGATGCACGCACAC 59.481 50.000 0.00 0.00 0.00 3.82 R
4283 5208 0.612744 TCCGGTCATCAATGTGCTCA 59.387 50.000 0.00 0.00 0.00 4.26 R
5088 7718 0.040067 GGTGCAGTTTCTGGCTTTCG 60.040 55.000 0.00 0.00 31.21 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.082700 TGTTGTACTTGCATGTTATGTATGG 57.917 36.000 10.85 0.00 0.00 2.74
27 28 6.881602 TGTTGTACTTGCATGTTATGTATGGA 59.118 34.615 10.85 0.00 0.00 3.41
28 29 7.555914 TGTTGTACTTGCATGTTATGTATGGAT 59.444 33.333 10.85 0.00 0.00 3.41
29 30 7.495135 TGTACTTGCATGTTATGTATGGATG 57.505 36.000 10.85 0.00 0.00 3.51
30 31 7.278875 TGTACTTGCATGTTATGTATGGATGA 58.721 34.615 10.85 0.00 0.00 2.92
31 32 7.938490 TGTACTTGCATGTTATGTATGGATGAT 59.062 33.333 10.85 0.00 0.00 2.45
32 33 7.828508 ACTTGCATGTTATGTATGGATGATT 57.171 32.000 0.00 0.00 0.00 2.57
33 34 8.241497 ACTTGCATGTTATGTATGGATGATTT 57.759 30.769 0.00 0.00 0.00 2.17
34 35 9.353431 ACTTGCATGTTATGTATGGATGATTTA 57.647 29.630 0.00 0.00 0.00 1.40
37 38 8.245491 TGCATGTTATGTATGGATGATTTATGC 58.755 33.333 0.00 0.00 36.25 3.14
38 39 7.703621 GCATGTTATGTATGGATGATTTATGCC 59.296 37.037 0.00 0.00 31.24 4.40
39 40 8.741841 CATGTTATGTATGGATGATTTATGCCA 58.258 33.333 0.00 0.00 34.45 4.92
40 41 8.882557 TGTTATGTATGGATGATTTATGCCAT 57.117 30.769 0.00 0.00 43.22 4.40
41 42 8.959548 TGTTATGTATGGATGATTTATGCCATC 58.040 33.333 0.00 0.00 41.19 3.51
42 43 9.182214 GTTATGTATGGATGATTTATGCCATCT 57.818 33.333 0.00 0.00 41.19 2.90
43 44 9.758021 TTATGTATGGATGATTTATGCCATCTT 57.242 29.630 0.00 0.00 41.19 2.40
44 45 8.660295 ATGTATGGATGATTTATGCCATCTTT 57.340 30.769 0.00 0.00 41.19 2.52
45 46 8.481492 TGTATGGATGATTTATGCCATCTTTT 57.519 30.769 0.00 0.00 41.19 2.27
46 47 9.585369 TGTATGGATGATTTATGCCATCTTTTA 57.415 29.630 0.00 0.00 41.19 1.52
70 71 9.796120 TTAAAAAGTTTAATGAATATCAGCCGG 57.204 29.630 0.00 0.00 0.00 6.13
71 72 7.404671 AAAAGTTTAATGAATATCAGCCGGT 57.595 32.000 1.90 0.00 0.00 5.28
72 73 7.404671 AAAGTTTAATGAATATCAGCCGGTT 57.595 32.000 1.90 0.00 0.00 4.44
73 74 7.404671 AAGTTTAATGAATATCAGCCGGTTT 57.595 32.000 1.90 0.00 0.00 3.27
74 75 6.795399 AGTTTAATGAATATCAGCCGGTTTG 58.205 36.000 1.90 2.01 0.00 2.93
75 76 3.715628 AATGAATATCAGCCGGTTTGC 57.284 42.857 1.90 0.00 0.00 3.68
76 77 2.121291 TGAATATCAGCCGGTTTGCA 57.879 45.000 1.90 0.00 0.00 4.08
77 78 2.441410 TGAATATCAGCCGGTTTGCAA 58.559 42.857 1.90 0.00 0.00 4.08
78 79 2.423185 TGAATATCAGCCGGTTTGCAAG 59.577 45.455 1.90 0.00 0.00 4.01
79 80 2.418368 ATATCAGCCGGTTTGCAAGA 57.582 45.000 1.90 0.00 0.00 3.02
80 81 2.192664 TATCAGCCGGTTTGCAAGAA 57.807 45.000 1.90 0.00 0.00 2.52
81 82 1.549203 ATCAGCCGGTTTGCAAGAAT 58.451 45.000 1.90 0.00 0.00 2.40
82 83 0.597568 TCAGCCGGTTTGCAAGAATG 59.402 50.000 1.90 0.00 0.00 2.67
83 84 0.314935 CAGCCGGTTTGCAAGAATGT 59.685 50.000 1.90 0.00 0.00 2.71
84 85 0.598065 AGCCGGTTTGCAAGAATGTC 59.402 50.000 1.90 0.00 0.00 3.06
85 86 0.729140 GCCGGTTTGCAAGAATGTCG 60.729 55.000 1.90 0.00 0.00 4.35
86 87 0.591170 CCGGTTTGCAAGAATGTCGT 59.409 50.000 0.00 0.00 0.00 4.34
87 88 1.001815 CCGGTTTGCAAGAATGTCGTT 60.002 47.619 0.00 0.00 0.00 3.85
88 89 2.542824 CCGGTTTGCAAGAATGTCGTTT 60.543 45.455 0.00 0.00 0.00 3.60
89 90 2.467305 CGGTTTGCAAGAATGTCGTTTG 59.533 45.455 0.00 0.00 0.00 2.93
90 91 2.218530 GGTTTGCAAGAATGTCGTTTGC 59.781 45.455 0.00 1.75 45.53 3.68
91 92 3.115554 GTTTGCAAGAATGTCGTTTGCT 58.884 40.909 0.00 0.00 45.53 3.91
92 93 4.286910 GTTTGCAAGAATGTCGTTTGCTA 58.713 39.130 0.00 0.00 45.53 3.49
93 94 4.560136 TTGCAAGAATGTCGTTTGCTAA 57.440 36.364 0.00 1.13 45.53 3.09
94 95 4.145876 TGCAAGAATGTCGTTTGCTAAG 57.854 40.909 9.47 0.00 45.53 2.18
95 96 3.563808 TGCAAGAATGTCGTTTGCTAAGT 59.436 39.130 9.47 0.00 45.53 2.24
96 97 4.151798 GCAAGAATGTCGTTTGCTAAGTC 58.848 43.478 1.51 0.00 42.84 3.01
97 98 4.319477 GCAAGAATGTCGTTTGCTAAGTCA 60.319 41.667 1.51 0.00 42.84 3.41
98 99 5.377358 CAAGAATGTCGTTTGCTAAGTCAG 58.623 41.667 0.00 0.00 0.00 3.51
99 100 4.883083 AGAATGTCGTTTGCTAAGTCAGA 58.117 39.130 0.00 0.00 0.00 3.27
100 101 5.297547 AGAATGTCGTTTGCTAAGTCAGAA 58.702 37.500 0.00 0.00 0.00 3.02
101 102 5.758296 AGAATGTCGTTTGCTAAGTCAGAAA 59.242 36.000 0.00 0.00 0.00 2.52
102 103 4.789095 TGTCGTTTGCTAAGTCAGAAAC 57.211 40.909 0.00 0.00 0.00 2.78
103 104 4.185394 TGTCGTTTGCTAAGTCAGAAACA 58.815 39.130 0.00 0.00 30.76 2.83
104 105 4.814234 TGTCGTTTGCTAAGTCAGAAACAT 59.186 37.500 0.00 0.00 30.76 2.71
105 106 5.050363 TGTCGTTTGCTAAGTCAGAAACATC 60.050 40.000 0.00 0.00 30.76 3.06
106 107 4.451096 TCGTTTGCTAAGTCAGAAACATCC 59.549 41.667 0.00 0.00 30.76 3.51
107 108 4.213270 CGTTTGCTAAGTCAGAAACATCCA 59.787 41.667 0.00 0.00 30.76 3.41
108 109 5.106555 CGTTTGCTAAGTCAGAAACATCCAT 60.107 40.000 0.00 0.00 30.76 3.41
109 110 6.092122 CGTTTGCTAAGTCAGAAACATCCATA 59.908 38.462 0.00 0.00 30.76 2.74
110 111 7.201644 CGTTTGCTAAGTCAGAAACATCCATAT 60.202 37.037 0.00 0.00 30.76 1.78
111 112 7.792374 TTGCTAAGTCAGAAACATCCATATC 57.208 36.000 0.00 0.00 0.00 1.63
112 113 5.985530 TGCTAAGTCAGAAACATCCATATCG 59.014 40.000 0.00 0.00 0.00 2.92
113 114 6.183360 TGCTAAGTCAGAAACATCCATATCGA 60.183 38.462 0.00 0.00 0.00 3.59
114 115 6.144724 GCTAAGTCAGAAACATCCATATCGAC 59.855 42.308 0.00 0.00 0.00 4.20
115 116 4.611943 AGTCAGAAACATCCATATCGACG 58.388 43.478 0.00 0.00 0.00 5.12
116 117 3.736252 GTCAGAAACATCCATATCGACGG 59.264 47.826 0.00 0.00 0.00 4.79
117 118 3.634910 TCAGAAACATCCATATCGACGGA 59.365 43.478 2.77 2.77 35.27 4.69
118 119 4.280929 TCAGAAACATCCATATCGACGGAT 59.719 41.667 6.97 6.97 42.96 4.18
119 120 4.991056 CAGAAACATCCATATCGACGGATT 59.009 41.667 9.56 0.00 40.12 3.01
120 121 4.991056 AGAAACATCCATATCGACGGATTG 59.009 41.667 9.56 8.40 40.12 2.67
121 122 4.336889 AACATCCATATCGACGGATTGT 57.663 40.909 9.56 8.88 40.12 2.71
122 123 4.336889 ACATCCATATCGACGGATTGTT 57.663 40.909 9.56 0.00 40.12 2.83
123 124 4.307432 ACATCCATATCGACGGATTGTTC 58.693 43.478 9.56 0.00 40.12 3.18
124 125 3.380479 TCCATATCGACGGATTGTTCC 57.620 47.619 0.00 0.00 38.81 3.62
125 126 2.036733 TCCATATCGACGGATTGTTCCC 59.963 50.000 0.00 0.00 39.01 3.97
126 127 2.037251 CCATATCGACGGATTGTTCCCT 59.963 50.000 0.00 0.00 39.01 4.20
127 128 2.882927 TATCGACGGATTGTTCCCTG 57.117 50.000 0.00 0.00 39.01 4.45
128 129 0.902531 ATCGACGGATTGTTCCCTGT 59.097 50.000 0.00 0.00 39.01 4.00
129 130 0.245539 TCGACGGATTGTTCCCTGTC 59.754 55.000 0.00 0.00 39.01 3.51
130 131 0.739813 CGACGGATTGTTCCCTGTCC 60.740 60.000 0.00 0.00 39.01 4.02
131 132 0.323629 GACGGATTGTTCCCTGTCCA 59.676 55.000 0.00 0.00 39.01 4.02
132 133 0.036306 ACGGATTGTTCCCTGTCCAC 59.964 55.000 0.00 0.00 39.01 4.02
133 134 1.019278 CGGATTGTTCCCTGTCCACG 61.019 60.000 0.00 0.00 39.01 4.94
134 135 0.676782 GGATTGTTCCCTGTCCACGG 60.677 60.000 0.00 0.00 35.84 4.94
135 136 0.323629 GATTGTTCCCTGTCCACGGA 59.676 55.000 0.00 0.00 0.00 4.69
136 137 0.036306 ATTGTTCCCTGTCCACGGAC 59.964 55.000 9.38 9.38 44.77 4.79
160 161 3.481661 CGCGTACCGGAGCAAATT 58.518 55.556 9.46 0.00 0.00 1.82
161 162 1.791662 CGCGTACCGGAGCAAATTT 59.208 52.632 9.46 0.00 0.00 1.82
162 163 0.520412 CGCGTACCGGAGCAAATTTG 60.520 55.000 9.46 14.03 0.00 2.32
173 174 2.350738 CAAATTTGCCGGTGAGGGT 58.649 52.632 5.01 0.00 41.48 4.34
174 175 0.678950 CAAATTTGCCGGTGAGGGTT 59.321 50.000 5.01 0.00 41.48 4.11
175 176 0.678950 AAATTTGCCGGTGAGGGTTG 59.321 50.000 1.90 0.00 41.48 3.77
176 177 0.178975 AATTTGCCGGTGAGGGTTGA 60.179 50.000 1.90 0.00 41.48 3.18
177 178 0.178975 ATTTGCCGGTGAGGGTTGAA 60.179 50.000 1.90 0.00 41.48 2.69
178 179 0.821711 TTTGCCGGTGAGGGTTGAAG 60.822 55.000 1.90 0.00 41.48 3.02
179 180 1.701031 TTGCCGGTGAGGGTTGAAGA 61.701 55.000 1.90 0.00 41.48 2.87
180 181 1.299976 GCCGGTGAGGGTTGAAGAT 59.700 57.895 1.90 0.00 41.48 2.40
181 182 1.026718 GCCGGTGAGGGTTGAAGATG 61.027 60.000 1.90 0.00 41.48 2.90
182 183 1.026718 CCGGTGAGGGTTGAAGATGC 61.027 60.000 0.00 0.00 35.97 3.91
183 184 1.026718 CGGTGAGGGTTGAAGATGCC 61.027 60.000 0.00 0.00 0.00 4.40
184 185 0.681243 GGTGAGGGTTGAAGATGCCC 60.681 60.000 0.00 0.00 42.64 5.36
195 196 4.706842 TGAAGATGCCCTTATTAGACCC 57.293 45.455 0.00 0.00 34.68 4.46
210 211 1.072666 GACCCGTACGAAAACGCGAT 61.073 55.000 18.76 0.00 41.51 4.58
247 248 1.377725 CAACCGCAGCATCCCTTCT 60.378 57.895 0.00 0.00 0.00 2.85
325 326 1.274703 TGAGCCTTCCACATCCCCTC 61.275 60.000 0.00 0.00 0.00 4.30
326 327 1.229951 AGCCTTCCACATCCCCTCA 60.230 57.895 0.00 0.00 0.00 3.86
327 328 1.077429 GCCTTCCACATCCCCTCAC 60.077 63.158 0.00 0.00 0.00 3.51
328 329 1.609783 CCTTCCACATCCCCTCACC 59.390 63.158 0.00 0.00 0.00 4.02
329 330 1.609783 CTTCCACATCCCCTCACCC 59.390 63.158 0.00 0.00 0.00 4.61
353 357 3.009115 ACCCCACCATCACCCTCG 61.009 66.667 0.00 0.00 0.00 4.63
478 482 2.678934 CGGGAAGGGACGAGGTCA 60.679 66.667 0.00 0.00 33.68 4.02
486 490 1.514087 GGACGAGGTCACGCCATTA 59.486 57.895 0.00 0.00 40.61 1.90
799 813 2.281414 CGCACCACACCCACATGA 60.281 61.111 0.00 0.00 0.00 3.07
837 851 2.217038 TGACCAGGTGAGGTGAGCC 61.217 63.158 0.00 0.00 43.38 4.70
899 1037 0.610687 CAAGAACGAGGGCTCCTTCT 59.389 55.000 0.00 0.00 36.82 2.85
901 1039 1.353091 AGAACGAGGGCTCCTTCTTT 58.647 50.000 0.00 0.00 33.31 2.52
904 1042 1.353091 ACGAGGGCTCCTTCTTTCTT 58.647 50.000 0.00 0.00 31.76 2.52
905 1043 1.002544 ACGAGGGCTCCTTCTTTCTTG 59.997 52.381 0.00 0.00 31.76 3.02
958 1096 1.826487 GAGGAGAGGAGGAGACGGC 60.826 68.421 0.00 0.00 0.00 5.68
965 1103 4.838486 GAGGAGACGGCGCTGTCG 62.838 72.222 36.48 21.69 43.70 4.35
1284 1477 0.033109 GATAGGGGTTGCCAAGGCTT 60.033 55.000 12.96 0.00 42.51 4.35
1300 1493 4.608170 AGGCTTGATTTGGGGATTTCTA 57.392 40.909 0.00 0.00 0.00 2.10
1301 1494 4.281657 AGGCTTGATTTGGGGATTTCTAC 58.718 43.478 0.00 0.00 0.00 2.59
1316 1509 0.175760 TCTACATTCTGTCGGCAGCC 59.824 55.000 13.43 0.00 42.29 4.85
1356 1549 5.636837 CCATCGAATAATCCACGTGTTTTT 58.363 37.500 15.65 7.39 0.00 1.94
1390 1583 2.271800 ACGCAAAGTCCGATTCTGATC 58.728 47.619 0.00 0.00 0.00 2.92
1460 1653 1.152589 TGGGTTTGCTGCCACATCA 60.153 52.632 0.00 0.00 0.00 3.07
1661 1865 6.152831 TGTTCGATCTCTTGAATTGGACTAGA 59.847 38.462 0.00 0.00 0.00 2.43
1711 1915 6.868339 CCGCAAAGTTTAGGAAATGATTCTTT 59.132 34.615 3.83 0.00 35.79 2.52
1774 1978 1.610886 GCAACTGAGGTTCCACTACCC 60.611 57.143 0.00 0.00 39.08 3.69
2000 2204 1.191535 ACCACCTGCAGTAATCGCTA 58.808 50.000 13.81 0.00 0.00 4.26
2232 2437 6.638873 CACTAGATAAGACAATAGCGACCTTG 59.361 42.308 0.00 0.00 0.00 3.61
2238 2443 1.135083 ACAATAGCGACCTTGGAGACG 60.135 52.381 0.00 0.00 0.00 4.18
2441 2649 6.349280 GGTTGCTGACATTCAACTTTATAGCA 60.349 38.462 15.76 0.00 41.53 3.49
2470 2678 5.123936 GCTTCGGAATATTTCTTACCCTGT 58.876 41.667 0.00 0.00 0.00 4.00
2692 2900 8.997621 ACGTATCATAAATTGTACACAGTTCT 57.002 30.769 0.00 0.00 0.00 3.01
2693 2901 9.431887 ACGTATCATAAATTGTACACAGTTCTT 57.568 29.630 0.00 0.00 0.00 2.52
2698 2906 9.431887 TCATAAATTGTACACAGTTCTTACTCC 57.568 33.333 0.00 0.00 30.26 3.85
2702 2910 9.841295 AAATTGTACACAGTTCTTACTCCTTTA 57.159 29.630 0.00 0.00 30.26 1.85
2709 2917 8.157476 ACACAGTTCTTACTCCTTTATCACAAT 58.843 33.333 0.00 0.00 30.26 2.71
2743 2951 5.232838 GCCAATGCAGTTGTATATCTTTTGC 59.767 40.000 0.00 0.00 36.01 3.68
2746 2954 5.565592 TGCAGTTGTATATCTTTTGCCAG 57.434 39.130 0.00 0.00 0.00 4.85
2789 3254 6.609533 CAACTGCATGATATGATTTAGGAGC 58.390 40.000 0.00 0.00 0.00 4.70
2799 3264 5.757850 ATGATTTAGGAGCGGTTTCATTC 57.242 39.130 0.00 0.00 0.00 2.67
2800 3265 4.584874 TGATTTAGGAGCGGTTTCATTCA 58.415 39.130 0.00 0.00 0.00 2.57
2801 3266 5.007034 TGATTTAGGAGCGGTTTCATTCAA 58.993 37.500 0.00 0.00 0.00 2.69
2802 3267 5.475220 TGATTTAGGAGCGGTTTCATTCAAA 59.525 36.000 0.00 0.00 0.00 2.69
2803 3268 5.975693 TTTAGGAGCGGTTTCATTCAAAT 57.024 34.783 0.00 0.00 0.00 2.32
2804 3269 5.975693 TTAGGAGCGGTTTCATTCAAATT 57.024 34.783 0.00 0.00 0.00 1.82
2805 3270 4.871933 AGGAGCGGTTTCATTCAAATTT 57.128 36.364 0.00 0.00 0.00 1.82
2806 3271 5.213891 AGGAGCGGTTTCATTCAAATTTT 57.786 34.783 0.00 0.00 0.00 1.82
2807 3272 4.990426 AGGAGCGGTTTCATTCAAATTTTG 59.010 37.500 2.59 2.59 0.00 2.44
2808 3273 4.377328 GGAGCGGTTTCATTCAAATTTTGC 60.377 41.667 4.19 0.00 0.00 3.68
2809 3274 4.379652 AGCGGTTTCATTCAAATTTTGCT 58.620 34.783 4.19 0.00 0.00 3.91
2810 3275 4.815846 AGCGGTTTCATTCAAATTTTGCTT 59.184 33.333 4.19 0.00 0.00 3.91
2811 3276 5.296531 AGCGGTTTCATTCAAATTTTGCTTT 59.703 32.000 4.19 0.00 0.00 3.51
2812 3277 5.970612 GCGGTTTCATTCAAATTTTGCTTTT 59.029 32.000 4.19 0.00 0.00 2.27
2813 3278 6.075467 GCGGTTTCATTCAAATTTTGCTTTTG 60.075 34.615 4.19 0.50 35.79 2.44
2814 3279 7.185453 CGGTTTCATTCAAATTTTGCTTTTGA 58.815 30.769 4.19 2.60 40.37 2.69
2844 3309 9.649024 AAAATAAAAATTTGTCGAATGCAACTG 57.351 25.926 0.00 0.00 0.00 3.16
2845 3310 4.713854 AAAATTTGTCGAATGCAACTGC 57.286 36.364 0.00 0.00 42.50 4.40
2863 3328 7.020010 GCAACTGCATGATATGATTTAGTAGC 58.980 38.462 0.00 0.00 41.59 3.58
2864 3329 7.308169 GCAACTGCATGATATGATTTAGTAGCA 60.308 37.037 0.00 0.00 41.59 3.49
2866 3331 6.370994 ACTGCATGATATGATTTAGTAGCAGC 59.629 38.462 0.00 0.00 46.92 5.25
2867 3332 6.470278 TGCATGATATGATTTAGTAGCAGCT 58.530 36.000 0.00 0.00 0.00 4.24
2868 3333 6.938596 TGCATGATATGATTTAGTAGCAGCTT 59.061 34.615 0.00 0.00 0.00 3.74
2869 3334 7.118825 TGCATGATATGATTTAGTAGCAGCTTC 59.881 37.037 0.00 0.00 0.00 3.86
2870 3335 7.413877 GCATGATATGATTTAGTAGCAGCTTCC 60.414 40.741 0.00 0.00 0.00 3.46
2871 3336 7.066307 TGATATGATTTAGTAGCAGCTTCCA 57.934 36.000 0.00 0.00 0.00 3.53
2872 3337 7.508687 TGATATGATTTAGTAGCAGCTTCCAA 58.491 34.615 0.00 0.00 0.00 3.53
2873 3338 7.992608 TGATATGATTTAGTAGCAGCTTCCAAA 59.007 33.333 0.00 0.00 0.00 3.28
2874 3339 8.930846 ATATGATTTAGTAGCAGCTTCCAAAT 57.069 30.769 0.00 2.25 0.00 2.32
2875 3340 6.441093 TGATTTAGTAGCAGCTTCCAAATG 57.559 37.500 9.58 0.00 0.00 2.32
2876 3341 5.945784 TGATTTAGTAGCAGCTTCCAAATGT 59.054 36.000 9.58 0.00 0.00 2.71
2877 3342 7.109501 TGATTTAGTAGCAGCTTCCAAATGTA 58.890 34.615 9.58 0.00 0.00 2.29
2878 3343 7.609918 TGATTTAGTAGCAGCTTCCAAATGTAA 59.390 33.333 9.58 0.00 0.00 2.41
2879 3344 7.938140 TTTAGTAGCAGCTTCCAAATGTAAT 57.062 32.000 0.00 0.00 0.00 1.89
2880 3345 7.938140 TTAGTAGCAGCTTCCAAATGTAATT 57.062 32.000 0.00 0.00 38.98 1.40
2882 3347 6.856895 AGTAGCAGCTTCCAAATGTAATTTC 58.143 36.000 0.00 0.00 44.81 2.17
2883 3348 5.990120 AGCAGCTTCCAAATGTAATTTCT 57.010 34.783 0.00 0.00 44.81 2.52
2884 3349 5.717119 AGCAGCTTCCAAATGTAATTTCTG 58.283 37.500 0.00 0.00 44.81 3.02
2885 3350 4.866486 GCAGCTTCCAAATGTAATTTCTGG 59.134 41.667 0.00 0.00 44.81 3.86
2886 3351 4.866486 CAGCTTCCAAATGTAATTTCTGGC 59.134 41.667 0.00 0.00 44.81 4.85
2887 3352 4.081476 AGCTTCCAAATGTAATTTCTGGCC 60.081 41.667 0.00 0.00 44.81 5.36
2888 3353 4.423732 CTTCCAAATGTAATTTCTGGCCG 58.576 43.478 0.00 0.00 44.81 6.13
2889 3354 2.757868 TCCAAATGTAATTTCTGGCCGG 59.242 45.455 4.71 4.71 44.81 6.13
2890 3355 2.495669 CCAAATGTAATTTCTGGCCGGT 59.504 45.455 12.43 0.00 44.81 5.28
2891 3356 3.697045 CCAAATGTAATTTCTGGCCGGTA 59.303 43.478 12.43 0.00 44.81 4.02
2892 3357 4.439563 CCAAATGTAATTTCTGGCCGGTAC 60.440 45.833 12.43 7.29 44.81 3.34
2893 3358 3.637911 ATGTAATTTCTGGCCGGTACA 57.362 42.857 12.43 13.07 0.00 2.90
2894 3359 2.980568 TGTAATTTCTGGCCGGTACAG 58.019 47.619 18.62 18.62 37.30 2.74
2895 3360 2.568062 TGTAATTTCTGGCCGGTACAGA 59.432 45.455 21.97 21.97 42.81 3.41
2896 3361 3.199071 TGTAATTTCTGGCCGGTACAGAT 59.801 43.478 24.94 16.02 43.82 2.90
2897 3362 4.406326 TGTAATTTCTGGCCGGTACAGATA 59.594 41.667 24.94 21.42 43.82 1.98
2898 3363 4.497291 AATTTCTGGCCGGTACAGATAA 57.503 40.909 24.94 21.03 43.82 1.75
2899 3364 3.985019 TTTCTGGCCGGTACAGATAAA 57.015 42.857 24.94 17.08 43.82 1.40
2900 3365 2.973694 TCTGGCCGGTACAGATAAAC 57.026 50.000 21.97 0.00 39.87 2.01
2901 3366 1.135527 TCTGGCCGGTACAGATAAACG 59.864 52.381 21.97 2.05 39.87 3.60
2902 3367 1.135527 CTGGCCGGTACAGATAAACGA 59.864 52.381 19.61 0.00 38.20 3.85
2903 3368 1.758280 TGGCCGGTACAGATAAACGAT 59.242 47.619 1.90 0.00 0.00 3.73
2904 3369 2.168936 TGGCCGGTACAGATAAACGATT 59.831 45.455 1.90 0.00 0.00 3.34
2905 3370 3.200483 GGCCGGTACAGATAAACGATTT 58.800 45.455 1.90 0.00 0.00 2.17
2906 3371 3.001939 GGCCGGTACAGATAAACGATTTG 59.998 47.826 1.90 0.00 0.00 2.32
2907 3372 3.545426 GCCGGTACAGATAAACGATTTGC 60.545 47.826 1.90 0.00 0.00 3.68
2908 3373 3.869246 CCGGTACAGATAAACGATTTGCT 59.131 43.478 0.00 0.00 0.00 3.91
2909 3374 4.260212 CCGGTACAGATAAACGATTTGCTG 60.260 45.833 0.00 0.00 34.57 4.41
2910 3375 4.565166 CGGTACAGATAAACGATTTGCTGA 59.435 41.667 12.06 0.00 33.44 4.26
2911 3376 5.276395 CGGTACAGATAAACGATTTGCTGAG 60.276 44.000 12.06 0.00 33.44 3.35
2912 3377 5.581085 GGTACAGATAAACGATTTGCTGAGT 59.419 40.000 12.06 0.00 33.44 3.41
2913 3378 6.092259 GGTACAGATAAACGATTTGCTGAGTT 59.908 38.462 12.06 0.00 33.44 3.01
2914 3379 7.277098 GGTACAGATAAACGATTTGCTGAGTTA 59.723 37.037 12.06 0.00 33.44 2.24
2915 3380 7.295952 ACAGATAAACGATTTGCTGAGTTAG 57.704 36.000 12.06 0.00 33.44 2.34
2916 3381 6.874134 ACAGATAAACGATTTGCTGAGTTAGT 59.126 34.615 12.06 0.00 33.44 2.24
2917 3382 7.148573 ACAGATAAACGATTTGCTGAGTTAGTG 60.149 37.037 12.06 0.00 33.44 2.74
2918 3383 7.063426 CAGATAAACGATTTGCTGAGTTAGTGA 59.937 37.037 0.00 0.00 31.92 3.41
2919 3384 7.602644 AGATAAACGATTTGCTGAGTTAGTGAA 59.397 33.333 0.00 0.00 0.00 3.18
2920 3385 6.560253 AAACGATTTGCTGAGTTAGTGAAT 57.440 33.333 0.00 0.00 0.00 2.57
2921 3386 5.536554 ACGATTTGCTGAGTTAGTGAATG 57.463 39.130 0.00 0.00 0.00 2.67
2922 3387 4.142816 ACGATTTGCTGAGTTAGTGAATGC 60.143 41.667 0.00 0.00 0.00 3.56
2923 3388 4.142838 CGATTTGCTGAGTTAGTGAATGCA 60.143 41.667 0.00 0.00 0.00 3.96
2924 3389 5.617529 CGATTTGCTGAGTTAGTGAATGCAA 60.618 40.000 0.00 0.00 37.20 4.08
2925 3390 5.710513 TTTGCTGAGTTAGTGAATGCAAT 57.289 34.783 0.00 0.00 38.46 3.56
2926 3391 6.816134 TTTGCTGAGTTAGTGAATGCAATA 57.184 33.333 0.00 0.00 38.46 1.90
2927 3392 7.395190 TTTGCTGAGTTAGTGAATGCAATAT 57.605 32.000 0.00 0.00 38.46 1.28
2928 3393 8.504812 TTTGCTGAGTTAGTGAATGCAATATA 57.495 30.769 0.00 0.00 38.46 0.86
2929 3394 7.719778 TGCTGAGTTAGTGAATGCAATATAG 57.280 36.000 0.00 0.00 0.00 1.31
2930 3395 6.203530 TGCTGAGTTAGTGAATGCAATATAGC 59.796 38.462 0.00 0.00 0.00 2.97
2945 3410 8.651391 TGCAATATAGCATCTTTGGAAAAATG 57.349 30.769 0.00 0.00 40.11 2.32
2946 3411 8.259411 TGCAATATAGCATCTTTGGAAAAATGT 58.741 29.630 0.00 0.00 40.11 2.71
2947 3412 9.748708 GCAATATAGCATCTTTGGAAAAATGTA 57.251 29.630 0.00 0.00 0.00 2.29
2952 3417 7.230849 AGCATCTTTGGAAAAATGTACATGA 57.769 32.000 9.63 0.00 0.00 3.07
2953 3418 7.669427 AGCATCTTTGGAAAAATGTACATGAA 58.331 30.769 9.63 0.00 0.00 2.57
2954 3419 8.149647 AGCATCTTTGGAAAAATGTACATGAAA 58.850 29.630 9.63 2.01 0.00 2.69
2955 3420 8.223100 GCATCTTTGGAAAAATGTACATGAAAC 58.777 33.333 9.63 2.28 0.00 2.78
2956 3421 9.480053 CATCTTTGGAAAAATGTACATGAAACT 57.520 29.630 9.63 0.00 0.00 2.66
2957 3422 8.870160 TCTTTGGAAAAATGTACATGAAACTG 57.130 30.769 9.63 0.00 0.00 3.16
2958 3423 7.925483 TCTTTGGAAAAATGTACATGAAACTGG 59.075 33.333 9.63 0.00 0.00 4.00
2959 3424 6.095432 TGGAAAAATGTACATGAAACTGGG 57.905 37.500 9.63 0.00 0.00 4.45
2960 3425 5.835819 TGGAAAAATGTACATGAAACTGGGA 59.164 36.000 9.63 0.00 0.00 4.37
2961 3426 6.156519 GGAAAAATGTACATGAAACTGGGAC 58.843 40.000 9.63 0.00 0.00 4.46
2962 3427 5.722021 AAAATGTACATGAAACTGGGACC 57.278 39.130 9.63 0.00 0.00 4.46
2963 3428 4.380843 AATGTACATGAAACTGGGACCA 57.619 40.909 9.63 0.00 0.00 4.02
2964 3429 3.866703 TGTACATGAAACTGGGACCAA 57.133 42.857 0.00 0.00 0.00 3.67
2965 3430 4.171878 TGTACATGAAACTGGGACCAAA 57.828 40.909 0.00 0.00 0.00 3.28
2966 3431 4.537751 TGTACATGAAACTGGGACCAAAA 58.462 39.130 0.00 0.00 0.00 2.44
2967 3432 5.144100 TGTACATGAAACTGGGACCAAAAT 58.856 37.500 0.00 0.00 0.00 1.82
2968 3433 4.871933 ACATGAAACTGGGACCAAAATC 57.128 40.909 0.00 0.00 0.00 2.17
2969 3434 4.222336 ACATGAAACTGGGACCAAAATCA 58.778 39.130 0.00 0.00 0.00 2.57
3062 3534 5.559148 AGAGAAGGCTGTAGAATAATGGG 57.441 43.478 0.00 0.00 0.00 4.00
3095 3567 5.602628 AGTGTAGTCTCAGTTTTCCACTTC 58.397 41.667 0.00 0.00 30.92 3.01
3131 3603 7.685481 TCAGAGTTTGGACAAGGTATTTATCA 58.315 34.615 0.00 0.00 0.00 2.15
3209 3684 9.518906 CATGCATAGCTTATAGTAGATGAGAAG 57.481 37.037 0.00 0.00 0.00 2.85
3230 3705 6.322201 AGAAGGAATGTATGTTTATGGCAAGG 59.678 38.462 0.00 0.00 0.00 3.61
3456 3931 3.249080 CCCTGTTTACTGTGGTTACAACG 59.751 47.826 0.00 0.00 36.14 4.10
3631 4106 1.446016 ACAGCTCCAAAGTTAGGGGT 58.554 50.000 0.00 0.00 0.00 4.95
3643 4120 6.294508 CCAAAGTTAGGGGTTAAATGAGTGTG 60.295 42.308 0.00 0.00 0.00 3.82
3644 4121 5.578157 AGTTAGGGGTTAAATGAGTGTGT 57.422 39.130 0.00 0.00 0.00 3.72
3730 4207 7.101054 TGATGTACCCTTTGTATGTGTAGTTC 58.899 38.462 0.00 0.00 0.00 3.01
3785 4272 0.663269 CGCGAAAAAGGCCTTGGTTC 60.663 55.000 21.33 22.72 0.00 3.62
3793 4280 1.067295 AGGCCTTGGTTCTGACATCA 58.933 50.000 0.00 0.00 0.00 3.07
3946 4853 6.477053 TTGTATGGATCTCTCCTTCTCTTG 57.523 41.667 0.00 0.00 42.59 3.02
3960 4883 0.595095 CTCTTGCAGGTCAAAGGTGC 59.405 55.000 0.00 0.00 37.73 5.01
4141 5066 7.555195 TGAGACATCATAAGTTCTCATGCAATT 59.445 33.333 0.00 0.00 30.44 2.32
4163 5088 3.876914 TGCGCCCTTCAATCTTATTACTG 59.123 43.478 4.18 0.00 0.00 2.74
4189 5114 4.953579 TGGTTCTGGTGAAAGCTAACTTTT 59.046 37.500 0.00 0.00 46.20 2.27
4214 5139 6.804770 TGCTGCAAAATTCATTTTAATGCT 57.195 29.167 0.00 0.00 37.86 3.79
4283 5208 2.262637 TGGTTCCTCGGGTTAGATGTT 58.737 47.619 0.00 0.00 0.00 2.71
4325 5250 1.375523 CTGTTGCGGTACTCCACCC 60.376 63.158 0.00 0.00 45.52 4.61
4339 5264 1.622607 CCACCCGGTGAGCTTCCATA 61.623 60.000 19.81 0.00 35.23 2.74
4359 5285 6.558775 TCCATAACTCCATGCCTTATAACTCT 59.441 38.462 0.00 0.00 0.00 3.24
4372 5298 8.436778 TGCCTTATAACTCTTGCTTAATATCCA 58.563 33.333 0.00 0.00 0.00 3.41
4400 5326 0.647410 GCACGTCGATGAGGACATTG 59.353 55.000 12.58 0.00 38.79 2.82
4410 5336 5.055144 CGATGAGGACATTGAATCACATCT 58.945 41.667 0.00 0.00 39.55 2.90
4413 5339 5.563592 TGAGGACATTGAATCACATCTTGT 58.436 37.500 0.00 0.00 0.00 3.16
4414 5340 5.645067 TGAGGACATTGAATCACATCTTGTC 59.355 40.000 0.00 0.00 34.99 3.18
4418 5344 5.563592 ACATTGAATCACATCTTGTCCTCA 58.436 37.500 0.00 0.00 0.00 3.86
4585 5512 2.268298 GAATTCCACTTTCTAGCGCGA 58.732 47.619 12.10 0.00 0.00 5.87
4586 5513 1.641577 ATTCCACTTTCTAGCGCGAC 58.358 50.000 12.10 0.04 0.00 5.19
4608 5535 1.338579 GGAACCCTGACTGAAGCAGAG 60.339 57.143 0.82 0.00 35.39 3.35
4710 5637 3.951663 AGGTATAGCTGTGGTTTTGACC 58.048 45.455 3.03 0.00 0.00 4.02
4808 5741 2.228059 CGAAGAAGGGTATCCGAGCTA 58.772 52.381 0.00 0.00 38.33 3.32
4809 5742 2.226912 CGAAGAAGGGTATCCGAGCTAG 59.773 54.545 0.00 0.00 38.33 3.42
4810 5743 1.623163 AGAAGGGTATCCGAGCTAGC 58.377 55.000 6.62 6.62 38.33 3.42
4811 5744 0.604073 GAAGGGTATCCGAGCTAGCC 59.396 60.000 12.13 1.79 38.33 3.93
4953 5886 4.425577 GTGCATTCTGGACTAGTTTTGG 57.574 45.455 0.00 0.00 35.71 3.28
4955 5888 3.181434 TGCATTCTGGACTAGTTTTGGGT 60.181 43.478 0.00 0.00 0.00 4.51
5016 5949 2.947652 CTCATGATCTGCCGTTCCAAAT 59.052 45.455 0.00 0.00 0.00 2.32
5019 5952 4.516321 TCATGATCTGCCGTTCCAAATATG 59.484 41.667 0.00 0.00 0.00 1.78
5023 5956 3.680490 TCTGCCGTTCCAAATATGTTGA 58.320 40.909 0.00 0.00 0.00 3.18
5025 5958 4.155826 TCTGCCGTTCCAAATATGTTGAAG 59.844 41.667 0.00 0.00 0.00 3.02
5026 5959 3.823873 TGCCGTTCCAAATATGTTGAAGT 59.176 39.130 0.00 0.00 0.00 3.01
5028 5961 5.221342 TGCCGTTCCAAATATGTTGAAGTTT 60.221 36.000 0.00 0.00 0.00 2.66
5029 5962 5.118510 GCCGTTCCAAATATGTTGAAGTTTG 59.881 40.000 0.00 0.00 0.00 2.93
5030 5963 6.212955 CCGTTCCAAATATGTTGAAGTTTGT 58.787 36.000 0.00 0.00 31.42 2.83
5031 5964 7.364200 CCGTTCCAAATATGTTGAAGTTTGTA 58.636 34.615 0.00 0.00 31.42 2.41
5032 5965 7.863375 CCGTTCCAAATATGTTGAAGTTTGTAA 59.137 33.333 0.00 0.00 31.42 2.41
5033 5966 8.687301 CGTTCCAAATATGTTGAAGTTTGTAAC 58.313 33.333 0.00 0.00 31.32 2.50
5034 5967 9.744468 GTTCCAAATATGTTGAAGTTTGTAACT 57.256 29.630 0.00 0.00 45.46 2.24
5061 7691 5.697633 GTGATGATGTGATTTGCCACTTTTT 59.302 36.000 0.00 0.00 37.89 1.94
5067 7697 6.418057 TGTGATTTGCCACTTTTTAGGATT 57.582 33.333 0.00 0.00 37.89 3.01
5071 7701 8.925700 GTGATTTGCCACTTTTTAGGATTTAAG 58.074 33.333 0.00 0.00 34.38 1.85
5073 7703 5.054390 TGCCACTTTTTAGGATTTAAGCG 57.946 39.130 0.00 0.00 0.00 4.68
5079 7709 6.854381 CACTTTTTAGGATTTAAGCGACGTTT 59.146 34.615 1.72 1.72 0.00 3.60
5083 7713 4.923264 AGGATTTAAGCGACGTTTCTTC 57.077 40.909 0.00 0.00 0.00 2.87
5085 7715 4.995487 AGGATTTAAGCGACGTTTCTTCTT 59.005 37.500 0.00 0.00 0.00 2.52
5086 7716 5.080068 GGATTTAAGCGACGTTTCTTCTTG 58.920 41.667 0.00 0.00 0.00 3.02
5088 7718 0.586802 AAGCGACGTTTCTTCTTGCC 59.413 50.000 0.00 0.00 0.00 4.52
5096 7726 1.336755 GTTTCTTCTTGCCGAAAGCCA 59.663 47.619 0.00 0.00 42.71 4.75
5103 7733 0.667993 TTGCCGAAAGCCAGAAACTG 59.332 50.000 0.00 0.00 42.71 3.16
5111 7741 0.326264 AGCCAGAAACTGCACCCTAG 59.674 55.000 0.00 0.00 0.00 3.02
5136 7766 9.423061 AGTTTCCAAAAATTCCGAATTATGAAG 57.577 29.630 15.93 5.79 0.00 3.02
5137 7767 9.203421 GTTTCCAAAAATTCCGAATTATGAAGT 57.797 29.630 15.93 0.00 0.00 3.01
5139 7769 9.849166 TTCCAAAAATTCCGAATTATGAAGTAC 57.151 29.630 15.93 0.00 0.00 2.73
5140 7770 8.463607 TCCAAAAATTCCGAATTATGAAGTACC 58.536 33.333 15.93 0.00 0.00 3.34
5141 7771 7.431084 CCAAAAATTCCGAATTATGAAGTACCG 59.569 37.037 15.93 0.00 0.00 4.02
5143 7773 6.598753 AATTCCGAATTATGAAGTACCGTG 57.401 37.500 4.46 0.00 0.00 4.94
5144 7774 4.049546 TCCGAATTATGAAGTACCGTGG 57.950 45.455 0.00 0.00 0.00 4.94
5146 7776 3.191669 CGAATTATGAAGTACCGTGGCA 58.808 45.455 0.00 0.00 0.00 4.92
5218 9832 4.470602 TCATCATAGAAAGGCGTAGGAGA 58.529 43.478 0.00 0.00 0.00 3.71
5219 9833 5.080337 TCATCATAGAAAGGCGTAGGAGAT 58.920 41.667 0.00 0.00 0.00 2.75
5229 9843 4.962155 AGGCGTAGGAGATTATGAAAAGG 58.038 43.478 0.00 0.00 0.00 3.11
5230 9844 3.498777 GGCGTAGGAGATTATGAAAAGGC 59.501 47.826 0.00 0.00 0.00 4.35
5262 9876 8.034058 AGAAAGATCTGATTCCTGTTTTTACG 57.966 34.615 0.00 0.00 33.59 3.18
5263 9877 7.878127 AGAAAGATCTGATTCCTGTTTTTACGA 59.122 33.333 0.00 0.00 33.59 3.43
5264 9878 7.602517 AAGATCTGATTCCTGTTTTTACGAG 57.397 36.000 0.00 0.00 0.00 4.18
5265 9879 6.936279 AGATCTGATTCCTGTTTTTACGAGA 58.064 36.000 0.00 0.00 0.00 4.04
5266 9880 7.386851 AGATCTGATTCCTGTTTTTACGAGAA 58.613 34.615 0.00 0.00 0.00 2.87
5267 9881 7.878127 AGATCTGATTCCTGTTTTTACGAGAAA 59.122 33.333 0.00 0.00 0.00 2.52
5268 9882 7.795482 TCTGATTCCTGTTTTTACGAGAAAA 57.205 32.000 0.00 0.00 0.00 2.29
5269 9883 8.215926 TCTGATTCCTGTTTTTACGAGAAAAA 57.784 30.769 8.11 8.11 30.95 1.94
5270 9884 8.342634 TCTGATTCCTGTTTTTACGAGAAAAAG 58.657 33.333 11.28 3.96 30.95 2.27
5271 9885 8.215926 TGATTCCTGTTTTTACGAGAAAAAGA 57.784 30.769 11.28 9.90 30.95 2.52
5272 9886 8.846211 TGATTCCTGTTTTTACGAGAAAAAGAT 58.154 29.630 11.28 0.00 30.95 2.40
5308 9922 5.232463 CAGGAACAAAATCTGAATTGGTGG 58.768 41.667 10.18 0.00 0.00 4.61
5311 9925 6.015434 AGGAACAAAATCTGAATTGGTGGTAC 60.015 38.462 10.18 0.00 0.00 3.34
5355 9969 4.144681 GCTGCTCGTCTGCTTGCG 62.145 66.667 0.00 0.00 36.79 4.85
5464 10091 0.036010 ATCGTTTCCCTCCACTGCTG 60.036 55.000 0.00 0.00 0.00 4.41
5467 10094 0.890996 GTTTCCCTCCACTGCTGGTG 60.891 60.000 0.00 0.00 44.96 4.17
5495 10122 3.004106 CCGTCCGTCCGTATTAAATCTCT 59.996 47.826 0.00 0.00 0.00 3.10
5497 10124 4.544651 GTCCGTCCGTATTAAATCTCTCC 58.455 47.826 0.00 0.00 0.00 3.71
5576 10203 1.451567 CCGACGACAGAGCCTCCTA 60.452 63.158 0.00 0.00 0.00 2.94
5577 10204 1.716826 CCGACGACAGAGCCTCCTAC 61.717 65.000 0.00 0.00 0.00 3.18
5578 10205 1.722677 GACGACAGAGCCTCCTACG 59.277 63.158 0.00 0.00 0.00 3.51
5579 10206 2.325666 GACGACAGAGCCTCCTACGC 62.326 65.000 0.00 0.00 0.00 4.42
5580 10207 2.409651 GACAGAGCCTCCTACGCG 59.590 66.667 3.53 3.53 0.00 6.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.190122 CCATACATAACATGCAAGTACAACAAT 58.810 33.333 0.00 0.00 0.00 2.71
1 2 7.391833 TCCATACATAACATGCAAGTACAACAA 59.608 33.333 0.00 0.00 0.00 2.83
2 3 6.881602 TCCATACATAACATGCAAGTACAACA 59.118 34.615 0.00 0.00 0.00 3.33
3 4 7.315247 TCCATACATAACATGCAAGTACAAC 57.685 36.000 0.00 0.00 0.00 3.32
4 5 7.772757 TCATCCATACATAACATGCAAGTACAA 59.227 33.333 0.00 0.00 0.00 2.41
5 6 7.278875 TCATCCATACATAACATGCAAGTACA 58.721 34.615 0.00 0.00 0.00 2.90
6 7 7.728847 TCATCCATACATAACATGCAAGTAC 57.271 36.000 0.00 0.00 0.00 2.73
7 8 8.922931 AATCATCCATACATAACATGCAAGTA 57.077 30.769 0.00 0.00 0.00 2.24
8 9 7.828508 AATCATCCATACATAACATGCAAGT 57.171 32.000 0.00 0.00 0.00 3.16
11 12 8.245491 GCATAAATCATCCATACATAACATGCA 58.755 33.333 0.00 0.00 34.26 3.96
12 13 7.703621 GGCATAAATCATCCATACATAACATGC 59.296 37.037 0.00 0.00 33.54 4.06
13 14 8.741841 TGGCATAAATCATCCATACATAACATG 58.258 33.333 0.00 0.00 0.00 3.21
14 15 8.882557 TGGCATAAATCATCCATACATAACAT 57.117 30.769 0.00 0.00 0.00 2.71
15 16 8.882557 ATGGCATAAATCATCCATACATAACA 57.117 30.769 0.00 0.00 37.53 2.41
16 17 9.182214 AGATGGCATAAATCATCCATACATAAC 57.818 33.333 0.00 0.00 39.25 1.89
17 18 9.758021 AAGATGGCATAAATCATCCATACATAA 57.242 29.630 0.00 0.00 39.25 1.90
18 19 9.758021 AAAGATGGCATAAATCATCCATACATA 57.242 29.630 0.00 0.00 39.25 2.29
19 20 8.660295 AAAGATGGCATAAATCATCCATACAT 57.340 30.769 0.00 0.00 39.25 2.29
20 21 8.481492 AAAAGATGGCATAAATCATCCATACA 57.519 30.769 0.00 0.00 39.25 2.29
44 45 9.796120 CCGGCTGATATTCATTAAACTTTTTAA 57.204 29.630 0.00 0.00 0.00 1.52
45 46 8.962679 ACCGGCTGATATTCATTAAACTTTTTA 58.037 29.630 0.00 0.00 0.00 1.52
46 47 7.836842 ACCGGCTGATATTCATTAAACTTTTT 58.163 30.769 0.00 0.00 0.00 1.94
47 48 7.404671 ACCGGCTGATATTCATTAAACTTTT 57.595 32.000 0.00 0.00 0.00 2.27
48 49 7.404671 AACCGGCTGATATTCATTAAACTTT 57.595 32.000 0.00 0.00 0.00 2.66
49 50 7.257722 CAAACCGGCTGATATTCATTAAACTT 58.742 34.615 0.00 0.00 0.00 2.66
50 51 6.680378 GCAAACCGGCTGATATTCATTAAACT 60.680 38.462 0.00 0.00 0.00 2.66
51 52 5.458779 GCAAACCGGCTGATATTCATTAAAC 59.541 40.000 0.00 0.00 0.00 2.01
52 53 5.126222 TGCAAACCGGCTGATATTCATTAAA 59.874 36.000 0.00 0.00 34.04 1.52
53 54 4.642437 TGCAAACCGGCTGATATTCATTAA 59.358 37.500 0.00 0.00 34.04 1.40
54 55 4.203226 TGCAAACCGGCTGATATTCATTA 58.797 39.130 0.00 0.00 34.04 1.90
55 56 3.023119 TGCAAACCGGCTGATATTCATT 58.977 40.909 0.00 0.00 34.04 2.57
56 57 2.653726 TGCAAACCGGCTGATATTCAT 58.346 42.857 0.00 0.00 34.04 2.57
57 58 2.121291 TGCAAACCGGCTGATATTCA 57.879 45.000 0.00 0.00 34.04 2.57
58 59 2.682856 TCTTGCAAACCGGCTGATATTC 59.317 45.455 0.00 0.00 34.04 1.75
59 60 2.722094 TCTTGCAAACCGGCTGATATT 58.278 42.857 0.00 0.00 34.04 1.28
60 61 2.418368 TCTTGCAAACCGGCTGATAT 57.582 45.000 0.00 0.00 34.04 1.63
61 62 2.192664 TTCTTGCAAACCGGCTGATA 57.807 45.000 0.00 0.00 34.04 2.15
62 63 1.203052 CATTCTTGCAAACCGGCTGAT 59.797 47.619 0.00 0.00 34.04 2.90
63 64 0.597568 CATTCTTGCAAACCGGCTGA 59.402 50.000 0.00 0.00 34.04 4.26
64 65 0.314935 ACATTCTTGCAAACCGGCTG 59.685 50.000 0.00 0.00 34.04 4.85
65 66 0.598065 GACATTCTTGCAAACCGGCT 59.402 50.000 0.00 0.00 34.04 5.52
66 67 0.729140 CGACATTCTTGCAAACCGGC 60.729 55.000 0.00 0.00 0.00 6.13
67 68 0.591170 ACGACATTCTTGCAAACCGG 59.409 50.000 0.00 0.00 0.00 5.28
68 69 2.399396 AACGACATTCTTGCAAACCG 57.601 45.000 0.00 0.75 0.00 4.44
69 70 2.218530 GCAAACGACATTCTTGCAAACC 59.781 45.455 0.00 0.00 43.89 3.27
70 71 3.115554 AGCAAACGACATTCTTGCAAAC 58.884 40.909 0.00 0.00 46.26 2.93
71 72 3.435105 AGCAAACGACATTCTTGCAAA 57.565 38.095 0.00 0.00 46.26 3.68
72 73 4.036262 ACTTAGCAAACGACATTCTTGCAA 59.964 37.500 0.00 0.00 46.26 4.08
73 74 3.563808 ACTTAGCAAACGACATTCTTGCA 59.436 39.130 8.55 0.00 46.26 4.08
74 75 4.147219 ACTTAGCAAACGACATTCTTGC 57.853 40.909 0.00 0.00 44.61 4.01
75 76 5.177511 TCTGACTTAGCAAACGACATTCTTG 59.822 40.000 0.00 0.00 0.00 3.02
76 77 5.297547 TCTGACTTAGCAAACGACATTCTT 58.702 37.500 0.00 0.00 0.00 2.52
77 78 4.883083 TCTGACTTAGCAAACGACATTCT 58.117 39.130 0.00 0.00 0.00 2.40
78 79 5.591643 TTCTGACTTAGCAAACGACATTC 57.408 39.130 0.00 0.00 0.00 2.67
79 80 5.295787 TGTTTCTGACTTAGCAAACGACATT 59.704 36.000 0.00 0.00 33.20 2.71
80 81 4.814234 TGTTTCTGACTTAGCAAACGACAT 59.186 37.500 0.00 0.00 33.20 3.06
81 82 4.185394 TGTTTCTGACTTAGCAAACGACA 58.815 39.130 0.00 0.00 33.20 4.35
82 83 4.789095 TGTTTCTGACTTAGCAAACGAC 57.211 40.909 0.00 0.00 33.20 4.34
83 84 4.451096 GGATGTTTCTGACTTAGCAAACGA 59.549 41.667 0.00 0.00 33.20 3.85
84 85 4.213270 TGGATGTTTCTGACTTAGCAAACG 59.787 41.667 0.00 0.00 33.20 3.60
85 86 5.689383 TGGATGTTTCTGACTTAGCAAAC 57.311 39.130 0.00 0.00 32.16 2.93
86 87 7.011389 CGATATGGATGTTTCTGACTTAGCAAA 59.989 37.037 0.00 0.00 0.00 3.68
87 88 6.479990 CGATATGGATGTTTCTGACTTAGCAA 59.520 38.462 0.00 0.00 0.00 3.91
88 89 5.985530 CGATATGGATGTTTCTGACTTAGCA 59.014 40.000 0.00 0.00 0.00 3.49
89 90 6.144724 GTCGATATGGATGTTTCTGACTTAGC 59.855 42.308 0.00 0.00 0.00 3.09
90 91 6.360947 CGTCGATATGGATGTTTCTGACTTAG 59.639 42.308 0.00 0.00 0.00 2.18
91 92 6.206498 CGTCGATATGGATGTTTCTGACTTA 58.794 40.000 0.00 0.00 0.00 2.24
92 93 5.043903 CGTCGATATGGATGTTTCTGACTT 58.956 41.667 0.00 0.00 0.00 3.01
93 94 4.499865 CCGTCGATATGGATGTTTCTGACT 60.500 45.833 6.24 0.00 33.01 3.41
94 95 3.736252 CCGTCGATATGGATGTTTCTGAC 59.264 47.826 6.24 0.00 33.01 3.51
95 96 3.634910 TCCGTCGATATGGATGTTTCTGA 59.365 43.478 6.24 0.00 35.77 3.27
96 97 3.977427 TCCGTCGATATGGATGTTTCTG 58.023 45.455 6.24 0.00 35.77 3.02
104 105 3.380479 GGAACAATCCGTCGATATGGA 57.620 47.619 6.48 6.48 45.04 3.41
115 116 0.676782 CCGTGGACAGGGAACAATCC 60.677 60.000 5.12 0.00 45.77 3.01
116 117 0.323629 TCCGTGGACAGGGAACAATC 59.676 55.000 11.02 0.00 41.85 2.67
117 118 0.036306 GTCCGTGGACAGGGAACAAT 59.964 55.000 14.62 0.00 45.69 2.71
118 119 1.448497 GTCCGTGGACAGGGAACAA 59.552 57.895 14.62 0.00 45.69 2.83
119 120 2.863346 CGTCCGTGGACAGGGAACA 61.863 63.158 18.54 0.00 45.69 3.18
120 121 2.048503 CGTCCGTGGACAGGGAAC 60.049 66.667 18.54 8.78 45.69 3.62
121 122 3.998672 GCGTCCGTGGACAGGGAA 61.999 66.667 18.54 0.00 45.69 3.97
123 124 2.717044 TATGCGTCCGTGGACAGGG 61.717 63.158 18.54 4.72 44.77 4.45
124 125 1.518572 GTATGCGTCCGTGGACAGG 60.519 63.158 18.54 4.87 44.77 4.00
125 126 1.518572 GGTATGCGTCCGTGGACAG 60.519 63.158 18.54 11.99 44.77 3.51
126 127 2.574929 GGTATGCGTCCGTGGACA 59.425 61.111 18.54 0.80 44.77 4.02
127 128 2.581409 CGGTATGCGTCCGTGGAC 60.581 66.667 9.04 9.04 42.62 4.02
155 156 0.678950 AACCCTCACCGGCAAATTTG 59.321 50.000 14.03 14.03 0.00 2.32
156 157 0.678950 CAACCCTCACCGGCAAATTT 59.321 50.000 0.00 0.00 0.00 1.82
157 158 0.178975 TCAACCCTCACCGGCAAATT 60.179 50.000 0.00 0.00 0.00 1.82
158 159 0.178975 TTCAACCCTCACCGGCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
159 160 0.821711 CTTCAACCCTCACCGGCAAA 60.822 55.000 0.00 0.00 0.00 3.68
160 161 1.228124 CTTCAACCCTCACCGGCAA 60.228 57.895 0.00 0.00 0.00 4.52
161 162 1.488705 ATCTTCAACCCTCACCGGCA 61.489 55.000 0.00 0.00 0.00 5.69
162 163 1.026718 CATCTTCAACCCTCACCGGC 61.027 60.000 0.00 0.00 0.00 6.13
163 164 1.026718 GCATCTTCAACCCTCACCGG 61.027 60.000 0.00 0.00 0.00 5.28
164 165 1.026718 GGCATCTTCAACCCTCACCG 61.027 60.000 0.00 0.00 0.00 4.94
165 166 0.681243 GGGCATCTTCAACCCTCACC 60.681 60.000 0.00 0.00 40.75 4.02
166 167 2.873797 GGGCATCTTCAACCCTCAC 58.126 57.895 0.00 0.00 40.75 3.51
170 171 4.822350 GTCTAATAAGGGCATCTTCAACCC 59.178 45.833 0.00 0.00 44.62 4.11
171 172 4.822350 GGTCTAATAAGGGCATCTTCAACC 59.178 45.833 0.00 0.00 36.93 3.77
172 173 4.822350 GGGTCTAATAAGGGCATCTTCAAC 59.178 45.833 0.00 0.00 36.93 3.18
173 174 4.444306 CGGGTCTAATAAGGGCATCTTCAA 60.444 45.833 0.00 0.00 36.93 2.69
174 175 3.071023 CGGGTCTAATAAGGGCATCTTCA 59.929 47.826 0.00 0.00 36.93 3.02
175 176 3.071167 ACGGGTCTAATAAGGGCATCTTC 59.929 47.826 0.00 0.00 36.93 2.87
176 177 3.046374 ACGGGTCTAATAAGGGCATCTT 58.954 45.455 0.00 0.00 39.40 2.40
177 178 2.690840 ACGGGTCTAATAAGGGCATCT 58.309 47.619 0.00 0.00 0.00 2.90
178 179 3.613432 CGTACGGGTCTAATAAGGGCATC 60.613 52.174 7.57 0.00 0.00 3.91
179 180 2.298163 CGTACGGGTCTAATAAGGGCAT 59.702 50.000 7.57 0.00 0.00 4.40
180 181 1.682854 CGTACGGGTCTAATAAGGGCA 59.317 52.381 7.57 0.00 0.00 5.36
181 182 1.956477 TCGTACGGGTCTAATAAGGGC 59.044 52.381 16.52 0.00 0.00 5.19
182 183 4.654091 TTTCGTACGGGTCTAATAAGGG 57.346 45.455 16.52 0.00 0.00 3.95
183 184 4.500477 CGTTTTCGTACGGGTCTAATAAGG 59.500 45.833 16.52 0.00 37.86 2.69
184 185 4.027377 GCGTTTTCGTACGGGTCTAATAAG 60.027 45.833 16.52 1.06 46.03 1.73
185 186 3.857093 GCGTTTTCGTACGGGTCTAATAA 59.143 43.478 16.52 0.00 46.03 1.40
186 187 3.434637 GCGTTTTCGTACGGGTCTAATA 58.565 45.455 16.52 0.00 46.03 0.98
187 188 2.262211 GCGTTTTCGTACGGGTCTAAT 58.738 47.619 16.52 0.00 46.03 1.73
195 196 2.576593 GTCAAAATCGCGTTTTCGTACG 59.423 45.455 14.98 9.53 46.03 3.67
210 211 2.913765 CGCGGTGGCATGGTCAAAA 61.914 57.895 0.00 0.00 39.92 2.44
329 330 4.060667 GATGGTGGGGTGGGGTGG 62.061 72.222 0.00 0.00 0.00 4.61
353 357 2.633509 CCTCCACTTGCTTGCAGCC 61.634 63.158 5.82 0.00 41.51 4.85
811 825 1.842381 CTCACCTGGTCACCTTCCCC 61.842 65.000 0.00 0.00 0.00 4.81
905 1043 2.697761 CCACAGTGCATGCAGGAGC 61.698 63.158 23.41 9.52 42.57 4.70
1191 1379 2.663188 GGATCTTGCGCTAGGCCG 60.663 66.667 18.64 0.00 42.61 6.13
1247 1436 3.951775 ATCTGCCATCCGATCTCTAAC 57.048 47.619 0.00 0.00 0.00 2.34
1316 1509 1.821332 GGCGGGGCAGAATGAAGAG 60.821 63.158 0.00 0.00 39.69 2.85
1356 1549 2.177394 TTGCGTAACCAGATGAGCAA 57.823 45.000 0.00 0.00 41.48 3.91
1357 1550 2.076100 CTTTGCGTAACCAGATGAGCA 58.924 47.619 0.00 0.00 0.00 4.26
1358 1551 2.076863 ACTTTGCGTAACCAGATGAGC 58.923 47.619 0.00 0.00 0.00 4.26
1359 1552 2.673368 GGACTTTGCGTAACCAGATGAG 59.327 50.000 0.00 0.00 0.00 2.90
1360 1553 2.695359 GGACTTTGCGTAACCAGATGA 58.305 47.619 0.00 0.00 0.00 2.92
1362 1555 1.274167 TCGGACTTTGCGTAACCAGAT 59.726 47.619 0.00 0.00 31.47 2.90
1369 1562 3.444916 GATCAGAATCGGACTTTGCGTA 58.555 45.455 0.00 0.00 31.47 4.42
1460 1653 3.252554 TGTGGTAAGGAAAAATGGCCT 57.747 42.857 3.32 0.00 35.61 5.19
1464 1657 5.244755 CCCCAATTGTGGTAAGGAAAAATG 58.755 41.667 4.43 0.00 44.30 2.32
1470 1663 0.040499 GGCCCCAATTGTGGTAAGGA 59.960 55.000 8.84 0.00 44.30 3.36
1490 1683 2.111878 CAGGATCATCCGCACCCC 59.888 66.667 0.00 0.00 42.75 4.95
1661 1865 4.496341 CGAATAGCATCGCAATGGAAAAGT 60.496 41.667 0.00 0.00 35.85 2.66
1711 1915 2.352617 GGATCAAGCAAACCGAATGCAA 60.353 45.455 9.20 0.00 46.22 4.08
1774 1978 1.394917 CCTTCCTCGACGCTTTGATTG 59.605 52.381 0.00 0.00 0.00 2.67
2155 2359 6.875726 CCAGTCAGTCAGAACAATTATCTTCA 59.124 38.462 0.00 0.00 0.00 3.02
2159 2364 4.937620 TGCCAGTCAGTCAGAACAATTATC 59.062 41.667 0.00 0.00 0.00 1.75
2161 2366 4.350368 TGCCAGTCAGTCAGAACAATTA 57.650 40.909 0.00 0.00 0.00 1.40
2165 2370 2.936919 AATGCCAGTCAGTCAGAACA 57.063 45.000 0.00 0.00 0.00 3.18
2232 2437 2.047443 AGCCGAGAGTTCCGTCTCC 61.047 63.158 0.00 0.00 40.04 3.71
2238 2443 0.818296 TTCTAGCAGCCGAGAGTTCC 59.182 55.000 0.00 0.00 0.00 3.62
2346 2551 3.441496 AAAGCGGTATTGATGCCAATG 57.559 42.857 0.00 0.00 42.55 2.82
2441 2649 7.362660 GGGTAAGAAATATTCCGAAGCAAGTTT 60.363 37.037 0.00 0.00 0.00 2.66
2456 2664 8.754991 TTTCAAAGTTCACAGGGTAAGAAATA 57.245 30.769 0.00 0.00 0.00 1.40
2718 2926 5.520376 AAAGATATACAACTGCATTGGCC 57.480 39.130 0.00 0.00 43.20 5.36
2789 3254 7.185453 TCAAAAGCAAAATTTGAATGAAACCG 58.815 30.769 10.26 0.00 42.19 4.44
2818 3283 9.649024 CAGTTGCATTCGACAAATTTTTATTTT 57.351 25.926 0.00 0.00 0.00 1.82
2819 3284 7.798052 GCAGTTGCATTCGACAAATTTTTATTT 59.202 29.630 0.00 0.00 41.59 1.40
2820 3285 7.290118 GCAGTTGCATTCGACAAATTTTTATT 58.710 30.769 0.00 0.00 41.59 1.40
2821 3286 6.820459 GCAGTTGCATTCGACAAATTTTTAT 58.180 32.000 0.00 0.00 41.59 1.40
2822 3287 6.209129 GCAGTTGCATTCGACAAATTTTTA 57.791 33.333 0.00 0.00 41.59 1.52
2823 3288 5.081888 GCAGTTGCATTCGACAAATTTTT 57.918 34.783 0.00 0.00 41.59 1.94
2824 3289 4.713854 GCAGTTGCATTCGACAAATTTT 57.286 36.364 0.00 0.00 41.59 1.82
2838 3303 7.020010 GCTACTAAATCATATCATGCAGTTGC 58.980 38.462 0.00 0.00 42.50 4.17
2839 3304 8.091385 TGCTACTAAATCATATCATGCAGTTG 57.909 34.615 0.00 0.00 0.00 3.16
2840 3305 7.094890 GCTGCTACTAAATCATATCATGCAGTT 60.095 37.037 0.00 0.00 43.88 3.16
2841 3306 6.370994 GCTGCTACTAAATCATATCATGCAGT 59.629 38.462 0.00 0.00 43.88 4.40
2842 3307 6.594547 AGCTGCTACTAAATCATATCATGCAG 59.405 38.462 0.00 0.00 44.54 4.41
2843 3308 6.470278 AGCTGCTACTAAATCATATCATGCA 58.530 36.000 0.00 0.00 0.00 3.96
2844 3309 6.981762 AGCTGCTACTAAATCATATCATGC 57.018 37.500 0.00 0.00 0.00 4.06
2845 3310 7.605309 TGGAAGCTGCTACTAAATCATATCATG 59.395 37.037 0.90 0.00 0.00 3.07
2846 3311 7.683578 TGGAAGCTGCTACTAAATCATATCAT 58.316 34.615 0.90 0.00 0.00 2.45
2847 3312 7.066307 TGGAAGCTGCTACTAAATCATATCA 57.934 36.000 0.90 0.00 0.00 2.15
2848 3313 7.969536 TTGGAAGCTGCTACTAAATCATATC 57.030 36.000 0.90 0.00 0.00 1.63
2849 3314 8.790718 CATTTGGAAGCTGCTACTAAATCATAT 58.209 33.333 0.90 0.00 0.00 1.78
2850 3315 7.775093 ACATTTGGAAGCTGCTACTAAATCATA 59.225 33.333 0.90 0.00 0.00 2.15
2851 3316 6.604795 ACATTTGGAAGCTGCTACTAAATCAT 59.395 34.615 0.90 0.00 0.00 2.45
2852 3317 5.945784 ACATTTGGAAGCTGCTACTAAATCA 59.054 36.000 0.90 0.00 0.00 2.57
2853 3318 6.442513 ACATTTGGAAGCTGCTACTAAATC 57.557 37.500 0.90 0.00 0.00 2.17
2854 3319 7.938140 TTACATTTGGAAGCTGCTACTAAAT 57.062 32.000 0.90 7.28 0.00 1.40
2855 3320 7.938140 ATTACATTTGGAAGCTGCTACTAAA 57.062 32.000 0.90 5.14 0.00 1.85
2856 3321 7.938140 AATTACATTTGGAAGCTGCTACTAA 57.062 32.000 0.90 3.13 0.00 2.24
2857 3322 7.829211 AGAAATTACATTTGGAAGCTGCTACTA 59.171 33.333 0.90 0.00 31.47 1.82
2858 3323 6.660949 AGAAATTACATTTGGAAGCTGCTACT 59.339 34.615 0.90 0.00 31.47 2.57
2859 3324 6.749118 CAGAAATTACATTTGGAAGCTGCTAC 59.251 38.462 0.90 0.00 31.47 3.58
2860 3325 6.127647 CCAGAAATTACATTTGGAAGCTGCTA 60.128 38.462 0.90 0.00 31.47 3.49
2861 3326 5.337009 CCAGAAATTACATTTGGAAGCTGCT 60.337 40.000 0.00 0.00 31.47 4.24
2862 3327 4.866486 CCAGAAATTACATTTGGAAGCTGC 59.134 41.667 0.00 0.00 31.47 5.25
2863 3328 4.866486 GCCAGAAATTACATTTGGAAGCTG 59.134 41.667 0.00 0.00 31.47 4.24
2864 3329 4.081476 GGCCAGAAATTACATTTGGAAGCT 60.081 41.667 0.00 0.00 31.47 3.74
2865 3330 4.183865 GGCCAGAAATTACATTTGGAAGC 58.816 43.478 0.00 0.00 31.47 3.86
2866 3331 4.423732 CGGCCAGAAATTACATTTGGAAG 58.576 43.478 2.24 0.00 31.47 3.46
2867 3332 3.194542 CCGGCCAGAAATTACATTTGGAA 59.805 43.478 2.24 0.00 31.47 3.53
2868 3333 2.757868 CCGGCCAGAAATTACATTTGGA 59.242 45.455 2.24 0.00 31.47 3.53
2869 3334 2.495669 ACCGGCCAGAAATTACATTTGG 59.504 45.455 0.00 0.00 31.47 3.28
2870 3335 3.866883 ACCGGCCAGAAATTACATTTG 57.133 42.857 0.00 0.00 31.47 2.32
2871 3336 4.337145 TGTACCGGCCAGAAATTACATTT 58.663 39.130 0.00 0.00 34.64 2.32
2872 3337 3.945285 CTGTACCGGCCAGAAATTACATT 59.055 43.478 14.95 0.00 31.38 2.71
2873 3338 3.199071 TCTGTACCGGCCAGAAATTACAT 59.801 43.478 19.16 0.00 36.07 2.29
2874 3339 2.568062 TCTGTACCGGCCAGAAATTACA 59.432 45.455 19.16 9.07 36.07 2.41
2875 3340 3.255969 TCTGTACCGGCCAGAAATTAC 57.744 47.619 19.16 5.00 36.07 1.89
2876 3341 5.617528 TTATCTGTACCGGCCAGAAATTA 57.382 39.130 23.62 12.15 41.93 1.40
2877 3342 4.497291 TTATCTGTACCGGCCAGAAATT 57.503 40.909 23.62 12.98 41.93 1.82
2878 3343 4.196971 GTTTATCTGTACCGGCCAGAAAT 58.803 43.478 23.62 13.57 41.93 2.17
2879 3344 3.602483 GTTTATCTGTACCGGCCAGAAA 58.398 45.455 23.62 16.79 41.93 2.52
2880 3345 2.417651 CGTTTATCTGTACCGGCCAGAA 60.418 50.000 23.62 12.96 41.93 3.02
2881 3346 1.135527 CGTTTATCTGTACCGGCCAGA 59.864 52.381 22.47 22.47 42.74 3.86
2882 3347 1.135527 TCGTTTATCTGTACCGGCCAG 59.864 52.381 14.11 14.11 0.00 4.85
2883 3348 1.184431 TCGTTTATCTGTACCGGCCA 58.816 50.000 0.00 0.00 0.00 5.36
2884 3349 2.521105 ATCGTTTATCTGTACCGGCC 57.479 50.000 0.00 0.00 0.00 6.13
2885 3350 3.545426 GCAAATCGTTTATCTGTACCGGC 60.545 47.826 0.00 0.00 0.00 6.13
2886 3351 3.869246 AGCAAATCGTTTATCTGTACCGG 59.131 43.478 0.00 0.00 0.00 5.28
2887 3352 4.565166 TCAGCAAATCGTTTATCTGTACCG 59.435 41.667 0.00 0.00 0.00 4.02
2888 3353 5.581085 ACTCAGCAAATCGTTTATCTGTACC 59.419 40.000 0.00 0.00 0.00 3.34
2889 3354 6.648725 ACTCAGCAAATCGTTTATCTGTAC 57.351 37.500 0.00 0.00 0.00 2.90
2890 3355 8.033038 ACTAACTCAGCAAATCGTTTATCTGTA 58.967 33.333 0.00 0.00 0.00 2.74
2891 3356 6.874134 ACTAACTCAGCAAATCGTTTATCTGT 59.126 34.615 0.00 0.00 0.00 3.41
2892 3357 7.063426 TCACTAACTCAGCAAATCGTTTATCTG 59.937 37.037 0.00 2.83 0.00 2.90
2893 3358 7.097192 TCACTAACTCAGCAAATCGTTTATCT 58.903 34.615 0.00 0.00 0.00 1.98
2894 3359 7.290857 TCACTAACTCAGCAAATCGTTTATC 57.709 36.000 0.00 0.00 0.00 1.75
2895 3360 7.667043 TTCACTAACTCAGCAAATCGTTTAT 57.333 32.000 0.00 0.00 0.00 1.40
2896 3361 7.518161 CATTCACTAACTCAGCAAATCGTTTA 58.482 34.615 0.00 0.00 0.00 2.01
2897 3362 6.373779 CATTCACTAACTCAGCAAATCGTTT 58.626 36.000 0.00 0.00 0.00 3.60
2898 3363 5.617751 GCATTCACTAACTCAGCAAATCGTT 60.618 40.000 0.00 0.00 0.00 3.85
2899 3364 4.142816 GCATTCACTAACTCAGCAAATCGT 60.143 41.667 0.00 0.00 0.00 3.73
2900 3365 4.142838 TGCATTCACTAACTCAGCAAATCG 60.143 41.667 0.00 0.00 0.00 3.34
2901 3366 5.300969 TGCATTCACTAACTCAGCAAATC 57.699 39.130 0.00 0.00 0.00 2.17
2902 3367 5.710513 TTGCATTCACTAACTCAGCAAAT 57.289 34.783 0.00 0.00 37.54 2.32
2903 3368 5.710513 ATTGCATTCACTAACTCAGCAAA 57.289 34.783 0.00 0.00 42.75 3.68
2904 3369 7.254898 GCTATATTGCATTCACTAACTCAGCAA 60.255 37.037 4.16 0.00 43.50 3.91
2905 3370 6.203530 GCTATATTGCATTCACTAACTCAGCA 59.796 38.462 4.16 0.00 0.00 4.41
2906 3371 6.203530 TGCTATATTGCATTCACTAACTCAGC 59.796 38.462 7.80 0.00 38.12 4.26
2907 3372 7.719778 TGCTATATTGCATTCACTAACTCAG 57.280 36.000 7.80 0.00 38.12 3.35
2921 3386 8.652810 ACATTTTTCCAAAGATGCTATATTGC 57.347 30.769 1.87 1.87 34.79 3.56
2926 3391 8.970020 TCATGTACATTTTTCCAAAGATGCTAT 58.030 29.630 5.37 0.00 34.79 2.97
2927 3392 8.347004 TCATGTACATTTTTCCAAAGATGCTA 57.653 30.769 5.37 0.00 34.79 3.49
2928 3393 7.230849 TCATGTACATTTTTCCAAAGATGCT 57.769 32.000 5.37 0.00 34.79 3.79
2929 3394 7.887996 TTCATGTACATTTTTCCAAAGATGC 57.112 32.000 5.37 0.00 34.79 3.91
2930 3395 9.480053 AGTTTCATGTACATTTTTCCAAAGATG 57.520 29.630 5.37 1.92 36.77 2.90
2931 3396 9.480053 CAGTTTCATGTACATTTTTCCAAAGAT 57.520 29.630 5.37 0.00 0.00 2.40
2932 3397 7.925483 CCAGTTTCATGTACATTTTTCCAAAGA 59.075 33.333 5.37 0.00 0.00 2.52
2933 3398 7.171337 CCCAGTTTCATGTACATTTTTCCAAAG 59.829 37.037 5.37 0.00 0.00 2.77
2934 3399 6.989169 CCCAGTTTCATGTACATTTTTCCAAA 59.011 34.615 5.37 0.00 0.00 3.28
2935 3400 6.325028 TCCCAGTTTCATGTACATTTTTCCAA 59.675 34.615 5.37 0.00 0.00 3.53
2936 3401 5.835819 TCCCAGTTTCATGTACATTTTTCCA 59.164 36.000 5.37 0.00 0.00 3.53
2937 3402 6.156519 GTCCCAGTTTCATGTACATTTTTCC 58.843 40.000 5.37 0.00 0.00 3.13
2938 3403 6.156519 GGTCCCAGTTTCATGTACATTTTTC 58.843 40.000 5.37 0.00 0.00 2.29
2939 3404 5.600484 TGGTCCCAGTTTCATGTACATTTTT 59.400 36.000 5.37 0.00 0.00 1.94
2940 3405 5.144100 TGGTCCCAGTTTCATGTACATTTT 58.856 37.500 5.37 0.00 0.00 1.82
2941 3406 4.735369 TGGTCCCAGTTTCATGTACATTT 58.265 39.130 5.37 0.00 0.00 2.32
2942 3407 4.380843 TGGTCCCAGTTTCATGTACATT 57.619 40.909 5.37 0.00 0.00 2.71
2943 3408 4.380843 TTGGTCCCAGTTTCATGTACAT 57.619 40.909 1.41 1.41 0.00 2.29
2944 3409 3.866703 TTGGTCCCAGTTTCATGTACA 57.133 42.857 0.00 0.00 0.00 2.90
2945 3410 5.242838 TGATTTTGGTCCCAGTTTCATGTAC 59.757 40.000 0.00 0.00 0.00 2.90
2946 3411 5.242838 GTGATTTTGGTCCCAGTTTCATGTA 59.757 40.000 0.00 0.00 0.00 2.29
2947 3412 4.039124 GTGATTTTGGTCCCAGTTTCATGT 59.961 41.667 0.00 0.00 0.00 3.21
2948 3413 4.039004 TGTGATTTTGGTCCCAGTTTCATG 59.961 41.667 0.00 0.00 0.00 3.07
2949 3414 4.222336 TGTGATTTTGGTCCCAGTTTCAT 58.778 39.130 0.00 0.00 0.00 2.57
2950 3415 3.636679 TGTGATTTTGGTCCCAGTTTCA 58.363 40.909 0.00 0.00 0.00 2.69
2951 3416 4.099419 AGTTGTGATTTTGGTCCCAGTTTC 59.901 41.667 0.00 0.00 0.00 2.78
2952 3417 4.030216 AGTTGTGATTTTGGTCCCAGTTT 58.970 39.130 0.00 0.00 0.00 2.66
2953 3418 3.642141 AGTTGTGATTTTGGTCCCAGTT 58.358 40.909 0.00 0.00 0.00 3.16
2954 3419 3.312736 AGTTGTGATTTTGGTCCCAGT 57.687 42.857 0.00 0.00 0.00 4.00
2955 3420 4.670896 AAAGTTGTGATTTTGGTCCCAG 57.329 40.909 0.00 0.00 0.00 4.45
2956 3421 4.467795 TCAAAAGTTGTGATTTTGGTCCCA 59.532 37.500 10.31 0.00 44.20 4.37
2957 3422 5.017294 TCAAAAGTTGTGATTTTGGTCCC 57.983 39.130 10.31 0.00 44.20 4.46
2958 3423 5.660460 ACTCAAAAGTTGTGATTTTGGTCC 58.340 37.500 10.31 0.00 44.20 4.46
2959 3424 7.595311 AAACTCAAAAGTTGTGATTTTGGTC 57.405 32.000 9.85 0.00 45.07 4.02
2960 3425 8.311109 ACTAAACTCAAAAGTTGTGATTTTGGT 58.689 29.630 17.06 17.06 45.07 3.67
2961 3426 8.702163 ACTAAACTCAAAAGTTGTGATTTTGG 57.298 30.769 17.39 16.72 45.07 3.28
2968 3433 9.755064 CGGATATTACTAAACTCAAAAGTTGTG 57.245 33.333 0.00 0.00 45.07 3.33
2969 3434 8.448615 GCGGATATTACTAAACTCAAAAGTTGT 58.551 33.333 0.00 0.00 45.07 3.32
3062 3534 8.868635 AAACTGAGACTACACTACTTAACAAC 57.131 34.615 0.00 0.00 0.00 3.32
3095 3567 5.811613 TGTCCAAACTCTGAAGCAATTTTTG 59.188 36.000 0.00 0.00 0.00 2.44
3172 3644 7.736447 ATAAGCTATGCATGACTTAACCTTC 57.264 36.000 20.50 0.00 0.00 3.46
3202 3674 7.062322 TGCCATAAACATACATTCCTTCTCAT 58.938 34.615 0.00 0.00 0.00 2.90
3203 3675 6.422333 TGCCATAAACATACATTCCTTCTCA 58.578 36.000 0.00 0.00 0.00 3.27
3209 3684 4.099266 TGCCTTGCCATAAACATACATTCC 59.901 41.667 0.00 0.00 0.00 3.01
3230 3705 3.004106 GTGGAGAATGAGGTTATGCATGC 59.996 47.826 11.82 11.82 31.97 4.06
3358 3833 6.500049 TCCCATGTGAAACCAATATCCTTTTT 59.500 34.615 0.00 0.00 34.36 1.94
3359 3834 6.022315 TCCCATGTGAAACCAATATCCTTTT 58.978 36.000 0.00 0.00 34.36 2.27
3360 3835 5.588845 TCCCATGTGAAACCAATATCCTTT 58.411 37.500 0.00 0.00 34.36 3.11
3361 3836 5.203528 CTCCCATGTGAAACCAATATCCTT 58.796 41.667 0.00 0.00 34.36 3.36
3456 3931 1.725641 TCGACATGATCCTGCACAAC 58.274 50.000 0.00 0.00 0.00 3.32
3631 4106 2.286713 GCACGCACACACACTCATTTAA 60.287 45.455 0.00 0.00 0.00 1.52
3643 4120 0.518636 AATGACAGATGCACGCACAC 59.481 50.000 0.00 0.00 0.00 3.82
3644 4121 1.197492 GAAATGACAGATGCACGCACA 59.803 47.619 0.00 0.00 0.00 4.57
3730 4207 7.386851 CACATATTATCCTAGTTAGGGTGGTG 58.613 42.308 5.40 1.51 43.79 4.17
3925 4832 4.343526 TGCAAGAGAAGGAGAGATCCATAC 59.656 45.833 0.00 0.00 0.00 2.39
3946 4853 2.185004 TCTTAGCACCTTTGACCTGC 57.815 50.000 0.00 0.00 0.00 4.85
4141 5066 3.876914 CAGTAATAAGATTGAAGGGCGCA 59.123 43.478 10.83 0.00 0.00 6.09
4163 5088 1.680338 AGCTTTCACCAGAACCACAC 58.320 50.000 0.00 0.00 32.39 3.82
4189 5114 7.649973 AGCATTAAAATGAATTTTGCAGCAAA 58.350 26.923 16.93 16.93 40.00 3.68
4283 5208 0.612744 TCCGGTCATCAATGTGCTCA 59.387 50.000 0.00 0.00 0.00 4.26
4325 5250 1.207089 TGGAGTTATGGAAGCTCACCG 59.793 52.381 5.61 0.00 0.00 4.94
4339 5264 4.884164 GCAAGAGTTATAAGGCATGGAGTT 59.116 41.667 0.00 0.00 0.00 3.01
4359 5285 8.882736 CGTGCTATTATCATGGATATTAAGCAA 58.117 33.333 14.12 3.43 36.56 3.91
4372 5298 4.459337 TCCTCATCGACGTGCTATTATCAT 59.541 41.667 0.00 0.00 0.00 2.45
4376 5302 2.946990 TGTCCTCATCGACGTGCTATTA 59.053 45.455 0.00 0.00 35.40 0.98
4400 5326 5.350914 CAGAGTTGAGGACAAGATGTGATTC 59.649 44.000 0.00 0.00 36.64 2.52
4410 5336 1.762370 TGTGAGCAGAGTTGAGGACAA 59.238 47.619 0.00 0.00 0.00 3.18
4413 5339 2.001076 TCTGTGAGCAGAGTTGAGGA 57.999 50.000 0.00 0.00 45.94 3.71
4585 5512 2.058675 CTTCAGTCAGGGTTCCGGT 58.941 57.895 0.00 0.00 0.00 5.28
4586 5513 1.376037 GCTTCAGTCAGGGTTCCGG 60.376 63.158 0.00 0.00 0.00 5.14
4625 5552 8.374327 AGTATACAACAACTAACAAACAGGAC 57.626 34.615 5.50 0.00 0.00 3.85
4710 5637 2.357517 GTGTCAGCCAGTCCCACG 60.358 66.667 0.00 0.00 0.00 4.94
4782 5715 1.538419 GGATACCCTTCTTCGCCTTCG 60.538 57.143 0.00 0.00 0.00 3.79
4953 5886 2.706555 GCCTCAGCTGTTACAAAACC 57.293 50.000 14.67 0.00 34.49 3.27
5019 5952 9.546909 CATCATCACATAGTTACAAACTTCAAC 57.453 33.333 0.00 0.00 42.81 3.18
5023 5956 8.846943 TCACATCATCACATAGTTACAAACTT 57.153 30.769 0.00 0.00 42.81 2.66
5028 5961 7.201723 GGCAAATCACATCATCACATAGTTACA 60.202 37.037 0.00 0.00 0.00 2.41
5029 5962 7.134815 GGCAAATCACATCATCACATAGTTAC 58.865 38.462 0.00 0.00 0.00 2.50
5030 5963 6.827762 TGGCAAATCACATCATCACATAGTTA 59.172 34.615 0.00 0.00 0.00 2.24
5031 5964 5.653330 TGGCAAATCACATCATCACATAGTT 59.347 36.000 0.00 0.00 0.00 2.24
5032 5965 5.066893 GTGGCAAATCACATCATCACATAGT 59.933 40.000 0.00 0.00 37.57 2.12
5033 5966 5.298527 AGTGGCAAATCACATCATCACATAG 59.701 40.000 0.00 0.00 39.93 2.23
5034 5967 5.195185 AGTGGCAAATCACATCATCACATA 58.805 37.500 0.00 0.00 39.93 2.29
5035 5968 4.021229 AGTGGCAAATCACATCATCACAT 58.979 39.130 0.00 0.00 39.93 3.21
5036 5969 3.423749 AGTGGCAAATCACATCATCACA 58.576 40.909 0.00 0.00 39.93 3.58
5037 5970 4.445452 AAGTGGCAAATCACATCATCAC 57.555 40.909 0.00 0.00 39.93 3.06
5038 5971 5.471556 AAAAGTGGCAAATCACATCATCA 57.528 34.783 0.00 0.00 39.93 3.07
5039 5972 6.532657 CCTAAAAAGTGGCAAATCACATCATC 59.467 38.462 0.00 0.00 39.93 2.92
5040 5973 6.211184 TCCTAAAAAGTGGCAAATCACATCAT 59.789 34.615 0.00 0.00 39.93 2.45
5061 7691 5.717119 AGAAGAAACGTCGCTTAAATCCTA 58.283 37.500 3.21 0.00 0.00 2.94
5067 7697 2.222445 GGCAAGAAGAAACGTCGCTTAA 59.778 45.455 3.21 0.00 0.00 1.85
5071 7701 1.154654 CGGCAAGAAGAAACGTCGC 60.155 57.895 0.00 0.00 0.00 5.19
5073 7703 2.904915 CTTTCGGCAAGAAGAAACGTC 58.095 47.619 0.00 0.00 40.40 4.34
5079 7709 2.932663 CTGGCTTTCGGCAAGAAGA 58.067 52.632 0.00 0.00 44.58 2.87
5083 7713 0.954452 AGTTTCTGGCTTTCGGCAAG 59.046 50.000 0.00 0.00 45.84 4.01
5085 7715 1.795170 GCAGTTTCTGGCTTTCGGCA 61.795 55.000 0.00 0.00 44.01 5.69
5086 7716 1.081175 GCAGTTTCTGGCTTTCGGC 60.081 57.895 0.00 0.00 40.90 5.54
5088 7718 0.040067 GGTGCAGTTTCTGGCTTTCG 60.040 55.000 0.00 0.00 31.21 3.46
5103 7733 4.566004 GGAATTTTTGGAAACTAGGGTGC 58.434 43.478 0.00 0.00 0.00 5.01
5111 7741 9.203421 ACTTCATAATTCGGAATTTTTGGAAAC 57.797 29.630 20.04 0.00 32.38 2.78
5185 9798 4.824479 TTCTATGATGAAGTGACTGGCA 57.176 40.909 0.00 0.00 0.00 4.92
5186 9799 4.574013 CCTTTCTATGATGAAGTGACTGGC 59.426 45.833 0.00 0.00 0.00 4.85
5187 9800 4.574013 GCCTTTCTATGATGAAGTGACTGG 59.426 45.833 0.00 0.00 0.00 4.00
5236 9850 8.507249 CGTAAAAACAGGAATCAGATCTTTCTT 58.493 33.333 7.02 0.00 0.00 2.52
5238 9852 8.029642 TCGTAAAAACAGGAATCAGATCTTTC 57.970 34.615 0.00 0.00 0.00 2.62
5239 9853 7.878127 TCTCGTAAAAACAGGAATCAGATCTTT 59.122 33.333 0.00 0.00 0.00 2.52
5240 9854 7.386851 TCTCGTAAAAACAGGAATCAGATCTT 58.613 34.615 0.00 0.00 0.00 2.40
5241 9855 6.936279 TCTCGTAAAAACAGGAATCAGATCT 58.064 36.000 0.00 0.00 0.00 2.75
5243 9857 7.979444 TTTCTCGTAAAAACAGGAATCAGAT 57.021 32.000 0.00 0.00 0.00 2.90
5246 9860 8.215926 TCTTTTTCTCGTAAAAACAGGAATCA 57.784 30.769 6.95 0.00 0.00 2.57
5250 9864 9.550406 TCTTATCTTTTTCTCGTAAAAACAGGA 57.450 29.630 6.95 5.01 0.00 3.86
5254 9868 9.770503 GGGATCTTATCTTTTTCTCGTAAAAAC 57.229 33.333 6.95 0.00 0.00 2.43
5255 9869 9.509956 TGGGATCTTATCTTTTTCTCGTAAAAA 57.490 29.630 9.62 9.62 0.00 1.94
5256 9870 9.681062 ATGGGATCTTATCTTTTTCTCGTAAAA 57.319 29.630 0.00 0.00 0.00 1.52
5257 9871 9.681062 AATGGGATCTTATCTTTTTCTCGTAAA 57.319 29.630 0.00 0.00 0.00 2.01
5258 9872 9.326413 GAATGGGATCTTATCTTTTTCTCGTAA 57.674 33.333 0.00 0.00 0.00 3.18
5259 9873 7.931948 GGAATGGGATCTTATCTTTTTCTCGTA 59.068 37.037 0.00 0.00 0.00 3.43
5260 9874 6.768381 GGAATGGGATCTTATCTTTTTCTCGT 59.232 38.462 0.00 0.00 0.00 4.18
5261 9875 6.767902 TGGAATGGGATCTTATCTTTTTCTCG 59.232 38.462 0.00 0.00 0.00 4.04
5262 9876 7.230309 CCTGGAATGGGATCTTATCTTTTTCTC 59.770 40.741 0.00 0.00 0.00 2.87
5263 9877 7.065504 CCTGGAATGGGATCTTATCTTTTTCT 58.934 38.462 0.00 0.00 0.00 2.52
5264 9878 7.062957 TCCTGGAATGGGATCTTATCTTTTTC 58.937 38.462 0.00 0.00 0.00 2.29
5265 9879 6.985225 TCCTGGAATGGGATCTTATCTTTTT 58.015 36.000 0.00 0.00 0.00 1.94
5266 9880 6.596869 TCCTGGAATGGGATCTTATCTTTT 57.403 37.500 0.00 0.00 0.00 2.27
5267 9881 6.068853 TGTTCCTGGAATGGGATCTTATCTTT 60.069 38.462 13.07 0.00 32.41 2.52
5268 9882 5.433051 TGTTCCTGGAATGGGATCTTATCTT 59.567 40.000 13.07 0.00 32.41 2.40
5269 9883 4.977739 TGTTCCTGGAATGGGATCTTATCT 59.022 41.667 13.07 0.00 32.41 1.98
5270 9884 5.310409 TGTTCCTGGAATGGGATCTTATC 57.690 43.478 13.07 0.00 32.41 1.75
5271 9885 5.732331 TTGTTCCTGGAATGGGATCTTAT 57.268 39.130 13.07 0.00 32.41 1.73
5272 9886 5.528600 TTTGTTCCTGGAATGGGATCTTA 57.471 39.130 13.07 0.00 32.41 2.10
5275 9889 4.958581 AGATTTTGTTCCTGGAATGGGATC 59.041 41.667 13.07 13.29 32.41 3.36
5279 9893 5.726980 TTCAGATTTTGTTCCTGGAATGG 57.273 39.130 13.07 0.00 0.00 3.16
5308 9922 4.747529 GGTGTGCCCGGTCCGTAC 62.748 72.222 11.06 7.04 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.