Multiple sequence alignment - TraesCS6D01G122200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G122200 chr6D 100.000 4064 0 0 1 4064 86723880 86727943 0.000000e+00 7505.0
1 TraesCS6D01G122200 chr6D 73.519 1620 383 38 1105 2704 264441064 264442657 1.270000e-159 573.0
2 TraesCS6D01G122200 chr6D 100.000 48 0 0 3185 3232 86727017 86727064 5.590000e-14 89.8
3 TraesCS6D01G122200 chr6D 100.000 48 0 0 3138 3185 86727064 86727111 5.590000e-14 89.8
4 TraesCS6D01G122200 chr6D 74.057 212 33 14 3679 3881 423681022 423680824 2.620000e-07 67.6
5 TraesCS6D01G122200 chr6B 92.798 3013 149 27 194 3189 164371291 164374252 0.000000e+00 4300.0
6 TraesCS6D01G122200 chr6B 94.783 345 17 1 3185 3528 164374202 164374546 1.660000e-148 536.0
7 TraesCS6D01G122200 chr6B 74.074 351 87 3 2000 2347 408211663 408212012 1.520000e-29 141.0
8 TraesCS6D01G122200 chr6B 85.714 56 7 1 3683 3737 201295419 201295474 1.580000e-04 58.4
9 TraesCS6D01G122200 chr6A 90.776 2927 200 33 194 3095 104411145 104408264 0.000000e+00 3845.0
10 TraesCS6D01G122200 chr6A 93.420 1307 85 1 1789 3095 104406629 104405324 0.000000e+00 1936.0
11 TraesCS6D01G122200 chr6A 91.420 1387 109 3 1800 3185 104402166 104400789 0.000000e+00 1893.0
12 TraesCS6D01G122200 chr6A 91.026 468 23 4 3185 3651 104400836 104400387 7.470000e-172 614.0
13 TraesCS6D01G122200 chr6A 71.730 1613 412 39 1112 2704 373066955 373068543 2.920000e-111 412.0
14 TraesCS6D01G122200 chr6A 97.959 196 4 0 1 196 565007916 565008111 1.400000e-89 340.0
15 TraesCS6D01G122200 chr6A 87.500 96 9 2 3970 4064 104400389 104400296 1.540000e-19 108.0
16 TraesCS6D01G122200 chr2D 72.488 1443 343 43 1273 2697 472468782 472467376 2.260000e-112 416.0
17 TraesCS6D01G122200 chr2D 97.959 196 4 0 1 196 486471757 486471952 1.400000e-89 340.0
18 TraesCS6D01G122200 chr2D 97.475 198 5 0 1 198 630032384 630032187 5.030000e-89 339.0
19 TraesCS6D01G122200 chr2D 79.612 103 20 1 3627 3729 598049997 598049896 5.630000e-09 73.1
20 TraesCS6D01G122200 chr2A 72.488 1443 343 42 1273 2697 613989578 613988172 2.260000e-112 416.0
21 TraesCS6D01G122200 chr1D 98.462 195 3 0 2 196 106979162 106979356 1.080000e-90 344.0
22 TraesCS6D01G122200 chr1D 89.362 47 5 0 3679 3725 289493118 289493164 4.390000e-05 60.2
23 TraesCS6D01G122200 chr7D 97.970 197 4 0 1 197 550353089 550353285 3.890000e-90 342.0
24 TraesCS6D01G122200 chr7D 97.462 197 5 0 1 197 112162561 112162757 1.810000e-88 337.0
25 TraesCS6D01G122200 chr7D 88.235 51 6 0 3679 3729 77269928 77269878 1.220000e-05 62.1
26 TraesCS6D01G122200 chr4D 97.959 196 4 0 1 196 314486631 314486436 1.400000e-89 340.0
27 TraesCS6D01G122200 chr4D 97.462 197 4 1 1 197 67180654 67180459 6.510000e-88 335.0
28 TraesCS6D01G122200 chr5B 97.462 197 5 0 1 197 407636828 407637024 1.810000e-88 337.0
29 TraesCS6D01G122200 chr3B 91.667 48 4 0 3679 3726 479892648 479892695 2.620000e-07 67.6
30 TraesCS6D01G122200 chr2B 91.304 46 4 0 3679 3724 168056737 168056692 3.390000e-06 63.9
31 TraesCS6D01G122200 chr2B 86.667 60 3 5 3679 3736 227669984 227670040 1.220000e-05 62.1
32 TraesCS6D01G122200 chr3D 91.111 45 4 0 3685 3729 116159162 116159118 1.220000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G122200 chr6D 86723880 86727943 4063 False 2561.533333 7505 100.0000 1 4064 3 chr6D.!!$F2 4063
1 TraesCS6D01G122200 chr6D 264441064 264442657 1593 False 573.000000 573 73.5190 1105 2704 1 chr6D.!!$F1 1599
2 TraesCS6D01G122200 chr6B 164371291 164374546 3255 False 2418.000000 4300 93.7905 194 3528 2 chr6B.!!$F3 3334
3 TraesCS6D01G122200 chr6A 104400296 104411145 10849 True 1679.200000 3845 90.8284 194 4064 5 chr6A.!!$R1 3870
4 TraesCS6D01G122200 chr6A 373066955 373068543 1588 False 412.000000 412 71.7300 1112 2704 1 chr6A.!!$F1 1592
5 TraesCS6D01G122200 chr2D 472467376 472468782 1406 True 416.000000 416 72.4880 1273 2697 1 chr2D.!!$R1 1424
6 TraesCS6D01G122200 chr2A 613988172 613989578 1406 True 416.000000 416 72.4880 1273 2697 1 chr2A.!!$R1 1424

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.0 0.00 0.00 0.00 2.66 F
130 131 0.555769 TCAGGGGTGCTTGGAACTTT 59.444 50.0 0.00 0.00 0.00 2.66 F
133 134 0.888619 GGGGTGCTTGGAACTTTAGC 59.111 55.0 0.00 0.00 35.50 3.09 F
134 135 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.0 0.00 0.00 34.03 3.93 F
1019 1062 0.966875 ATGGCGATGGTGCACATGTT 60.967 50.0 20.43 0.00 40.72 2.71 F
2292 9751 0.248094 GCTATTGCCGGCGAAAAGAC 60.248 55.0 26.05 16.27 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1019 1062 0.266152 GGGGATCAGGAGGAGGAAGA 59.734 60.000 0.00 0.00 0.00 2.87 R
1284 1345 1.139947 GAAGGCGACCGAGAAGGAG 59.860 63.158 0.00 0.00 45.00 3.69 R
1734 1798 2.022129 CAGCACGGTCGACAGGTTC 61.022 63.158 19.84 10.16 0.00 3.62 R
1886 1950 3.650950 GAGGCTTGGACCCCAGCA 61.651 66.667 13.22 0.00 33.81 4.41 R
2604 10063 1.313812 CCGTTCTCACTAGCTCCGGT 61.314 60.000 0.00 0.00 0.00 5.28 R
3914 11374 0.105039 GCCCCAGTCGACTAATCAGG 59.895 60.000 19.57 14.64 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.257830 GTGTTAAAGGAGAGGAGTTAAATGAG 57.742 38.462 0.00 0.00 0.00 2.90
26 27 7.334671 GTGTTAAAGGAGAGGAGTTAAATGAGG 59.665 40.741 0.00 0.00 0.00 3.86
27 28 7.236847 TGTTAAAGGAGAGGAGTTAAATGAGGA 59.763 37.037 0.00 0.00 0.00 3.71
28 29 5.948742 AAGGAGAGGAGTTAAATGAGGAG 57.051 43.478 0.00 0.00 0.00 3.69
29 30 5.213868 AGGAGAGGAGTTAAATGAGGAGA 57.786 43.478 0.00 0.00 0.00 3.71
30 31 5.208121 AGGAGAGGAGTTAAATGAGGAGAG 58.792 45.833 0.00 0.00 0.00 3.20
31 32 5.043732 AGGAGAGGAGTTAAATGAGGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
32 33 5.301805 GGAGAGGAGTTAAATGAGGAGAGAG 59.698 48.000 0.00 0.00 0.00 3.20
33 34 6.086011 AGAGGAGTTAAATGAGGAGAGAGA 57.914 41.667 0.00 0.00 0.00 3.10
34 35 6.498538 AGAGGAGTTAAATGAGGAGAGAGAA 58.501 40.000 0.00 0.00 0.00 2.87
35 36 6.607198 AGAGGAGTTAAATGAGGAGAGAGAAG 59.393 42.308 0.00 0.00 0.00 2.85
36 37 6.498538 AGGAGTTAAATGAGGAGAGAGAAGA 58.501 40.000 0.00 0.00 0.00 2.87
37 38 6.379988 AGGAGTTAAATGAGGAGAGAGAAGAC 59.620 42.308 0.00 0.00 0.00 3.01
38 39 6.379988 GGAGTTAAATGAGGAGAGAGAAGACT 59.620 42.308 0.00 0.00 0.00 3.24
39 40 7.558444 GGAGTTAAATGAGGAGAGAGAAGACTA 59.442 40.741 0.00 0.00 0.00 2.59
40 41 8.887264 AGTTAAATGAGGAGAGAGAAGACTAA 57.113 34.615 0.00 0.00 0.00 2.24
41 42 9.487442 AGTTAAATGAGGAGAGAGAAGACTAAT 57.513 33.333 0.00 0.00 0.00 1.73
42 43 9.744468 GTTAAATGAGGAGAGAGAAGACTAATC 57.256 37.037 0.00 0.00 0.00 1.75
43 44 6.976934 AATGAGGAGAGAGAAGACTAATCC 57.023 41.667 0.00 0.00 0.00 3.01
44 45 5.458451 TGAGGAGAGAGAAGACTAATCCA 57.542 43.478 0.00 0.00 31.94 3.41
45 46 5.197451 TGAGGAGAGAGAAGACTAATCCAC 58.803 45.833 0.00 0.00 31.94 4.02
46 47 5.197451 GAGGAGAGAGAAGACTAATCCACA 58.803 45.833 0.00 0.00 31.94 4.17
47 48 5.776358 AGGAGAGAGAAGACTAATCCACAT 58.224 41.667 0.00 0.00 31.94 3.21
48 49 6.201591 AGGAGAGAGAAGACTAATCCACATT 58.798 40.000 0.00 0.00 31.94 2.71
49 50 6.671779 AGGAGAGAGAAGACTAATCCACATTT 59.328 38.462 0.00 0.00 31.94 2.32
50 51 7.181845 AGGAGAGAGAAGACTAATCCACATTTT 59.818 37.037 0.00 0.00 31.94 1.82
51 52 8.478877 GGAGAGAGAAGACTAATCCACATTTTA 58.521 37.037 0.00 0.00 0.00 1.52
52 53 9.528018 GAGAGAGAAGACTAATCCACATTTTAG 57.472 37.037 0.00 0.00 0.00 1.85
53 54 9.041354 AGAGAGAAGACTAATCCACATTTTAGT 57.959 33.333 0.00 0.00 40.44 2.24
56 57 9.535878 GAGAAGACTAATCCACATTTTAGTAGG 57.464 37.037 0.00 0.00 38.45 3.18
57 58 8.487028 AGAAGACTAATCCACATTTTAGTAGGG 58.513 37.037 0.00 0.00 38.45 3.53
58 59 7.138054 AGACTAATCCACATTTTAGTAGGGG 57.862 40.000 0.00 0.00 38.45 4.79
59 60 6.677076 AGACTAATCCACATTTTAGTAGGGGT 59.323 38.462 0.00 0.00 38.45 4.95
60 61 7.847848 AGACTAATCCACATTTTAGTAGGGGTA 59.152 37.037 0.00 0.00 38.45 3.69
61 62 7.799081 ACTAATCCACATTTTAGTAGGGGTAC 58.201 38.462 0.00 0.00 36.99 3.34
62 63 7.147426 ACTAATCCACATTTTAGTAGGGGTACC 60.147 40.741 2.17 2.17 41.38 3.34
102 103 7.974482 TTAGTCTCAAAACTAGTTTTAGCCC 57.026 36.000 28.43 18.06 40.45 5.19
103 104 5.314529 AGTCTCAAAACTAGTTTTAGCCCC 58.685 41.667 28.43 16.92 40.45 5.80
104 105 5.073280 AGTCTCAAAACTAGTTTTAGCCCCT 59.927 40.000 28.43 18.47 40.45 4.79
105 106 5.411977 GTCTCAAAACTAGTTTTAGCCCCTC 59.588 44.000 28.43 14.00 40.45 4.30
106 107 5.309806 TCTCAAAACTAGTTTTAGCCCCTCT 59.690 40.000 28.43 5.53 40.45 3.69
107 108 5.948842 TCAAAACTAGTTTTAGCCCCTCTT 58.051 37.500 28.43 4.84 40.45 2.85
108 109 6.370453 TCAAAACTAGTTTTAGCCCCTCTTT 58.630 36.000 28.43 4.35 40.45 2.52
109 110 7.519927 TCAAAACTAGTTTTAGCCCCTCTTTA 58.480 34.615 28.43 6.15 40.45 1.85
110 111 7.664318 TCAAAACTAGTTTTAGCCCCTCTTTAG 59.336 37.037 28.43 14.23 40.45 1.85
111 112 6.699242 AACTAGTTTTAGCCCCTCTTTAGT 57.301 37.500 1.12 0.00 0.00 2.24
112 113 6.297080 ACTAGTTTTAGCCCCTCTTTAGTC 57.703 41.667 0.00 0.00 0.00 2.59
113 114 5.783875 ACTAGTTTTAGCCCCTCTTTAGTCA 59.216 40.000 0.00 0.00 0.00 3.41
114 115 5.167303 AGTTTTAGCCCCTCTTTAGTCAG 57.833 43.478 0.00 0.00 0.00 3.51
115 116 4.019231 AGTTTTAGCCCCTCTTTAGTCAGG 60.019 45.833 0.00 0.00 0.00 3.86
120 121 0.253327 CCCTCTTTAGTCAGGGGTGC 59.747 60.000 0.00 0.00 45.39 5.01
121 122 1.280457 CCTCTTTAGTCAGGGGTGCT 58.720 55.000 0.00 0.00 28.24 4.40
122 123 1.630878 CCTCTTTAGTCAGGGGTGCTT 59.369 52.381 0.00 0.00 28.24 3.91
123 124 2.616510 CCTCTTTAGTCAGGGGTGCTTG 60.617 54.545 0.00 0.00 28.24 4.01
124 125 1.351017 TCTTTAGTCAGGGGTGCTTGG 59.649 52.381 0.00 0.00 0.00 3.61
125 126 1.351017 CTTTAGTCAGGGGTGCTTGGA 59.649 52.381 0.00 0.00 0.00 3.53
126 127 1.440618 TTAGTCAGGGGTGCTTGGAA 58.559 50.000 0.00 0.00 0.00 3.53
127 128 0.690762 TAGTCAGGGGTGCTTGGAAC 59.309 55.000 0.00 0.00 0.00 3.62
128 129 1.062488 AGTCAGGGGTGCTTGGAACT 61.062 55.000 0.00 0.00 0.00 3.01
129 130 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.000 0.00 0.00 0.00 2.66
130 131 0.555769 TCAGGGGTGCTTGGAACTTT 59.444 50.000 0.00 0.00 0.00 2.66
131 132 1.777878 TCAGGGGTGCTTGGAACTTTA 59.222 47.619 0.00 0.00 0.00 1.85
132 133 2.162681 CAGGGGTGCTTGGAACTTTAG 58.837 52.381 0.00 0.00 0.00 1.85
133 134 0.888619 GGGGTGCTTGGAACTTTAGC 59.111 55.000 0.00 0.00 35.50 3.09
134 135 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.000 0.00 0.00 34.03 3.93
135 136 1.547901 GGGTGCTTGGAACTTTAGCCT 60.548 52.381 0.00 0.00 34.03 4.58
136 137 1.813178 GGTGCTTGGAACTTTAGCCTC 59.187 52.381 0.00 0.00 34.03 4.70
137 138 2.553247 GGTGCTTGGAACTTTAGCCTCT 60.553 50.000 0.00 0.00 34.03 3.69
138 139 3.149981 GTGCTTGGAACTTTAGCCTCTT 58.850 45.455 0.00 0.00 34.03 2.85
139 140 4.324267 GTGCTTGGAACTTTAGCCTCTTA 58.676 43.478 0.00 0.00 34.03 2.10
140 141 4.760204 GTGCTTGGAACTTTAGCCTCTTAA 59.240 41.667 0.00 0.00 34.03 1.85
141 142 5.240844 GTGCTTGGAACTTTAGCCTCTTAAA 59.759 40.000 0.00 0.00 34.03 1.52
142 143 5.830991 TGCTTGGAACTTTAGCCTCTTAAAA 59.169 36.000 0.00 0.00 34.03 1.52
143 144 6.322712 TGCTTGGAACTTTAGCCTCTTAAAAA 59.677 34.615 0.00 0.00 34.03 1.94
144 145 6.863645 GCTTGGAACTTTAGCCTCTTAAAAAG 59.136 38.462 0.00 0.00 35.54 2.27
145 146 7.255486 GCTTGGAACTTTAGCCTCTTAAAAAGA 60.255 37.037 2.82 0.00 33.98 2.52
146 147 7.506328 TGGAACTTTAGCCTCTTAAAAAGAC 57.494 36.000 2.82 0.00 33.98 3.01
147 148 7.287810 TGGAACTTTAGCCTCTTAAAAAGACT 58.712 34.615 2.82 0.00 33.98 3.24
148 149 8.434392 TGGAACTTTAGCCTCTTAAAAAGACTA 58.566 33.333 2.82 0.00 33.98 2.59
149 150 9.451002 GGAACTTTAGCCTCTTAAAAAGACTAT 57.549 33.333 2.82 0.00 33.98 2.12
185 186 9.103861 GACTAAAATAAGTCTCTTGGATCCAAG 57.896 37.037 38.51 38.51 43.42 3.61
192 193 3.181526 CTTGGATCCAAGCACCCTC 57.818 57.895 35.47 0.00 45.38 4.30
202 203 2.019984 CAAGCACCCTCTAAATCAGGC 58.980 52.381 0.00 0.00 0.00 4.85
206 207 2.684927 GCACCCTCTAAATCAGGCACAT 60.685 50.000 0.00 0.00 0.00 3.21
212 213 4.271049 CCTCTAAATCAGGCACATTGTACG 59.729 45.833 0.00 0.00 0.00 3.67
244 245 7.538575 CATCCGAAATAAATCAACCTTTGACT 58.461 34.615 0.00 0.00 43.48 3.41
284 287 3.179599 GCACATTGTTTTGCGTAGAACAC 59.820 43.478 9.09 0.00 35.66 3.32
328 336 2.420022 CACCCTTGTTTGGATCATCGAC 59.580 50.000 0.00 0.00 0.00 4.20
342 350 6.538742 TGGATCATCGACACTAAATTTTCCTC 59.461 38.462 0.00 0.00 0.00 3.71
343 351 6.763610 GGATCATCGACACTAAATTTTCCTCT 59.236 38.462 0.00 0.00 0.00 3.69
345 353 6.697395 TCATCGACACTAAATTTTCCTCTGA 58.303 36.000 0.00 0.00 0.00 3.27
362 370 4.380233 CCTCTGATCCAAAACATCAGTTGC 60.380 45.833 9.04 0.00 45.24 4.17
501 511 5.906073 ACCAGCAAGTTTATATTGGAATGC 58.094 37.500 0.00 0.00 0.00 3.56
516 527 4.922206 TGGAATGCAGTACCTGAGAAAAT 58.078 39.130 0.00 0.00 32.44 1.82
519 530 6.543465 TGGAATGCAGTACCTGAGAAAATATG 59.457 38.462 0.00 0.00 32.44 1.78
590 612 1.123928 AGACCGATCCAAGGTGATCC 58.876 55.000 0.00 0.00 43.01 3.36
642 669 1.079819 CGGGGCTCAGTACACTGTG 60.080 63.158 6.19 6.19 44.12 3.66
705 732 2.559440 GACTGATTGGCTGACTCCATC 58.441 52.381 0.00 0.00 35.77 3.51
762 793 1.004044 CCTGTGGCTCACCTTCATTCT 59.996 52.381 3.33 0.00 36.63 2.40
865 896 2.607892 GGTTCACACTGCTGCGTCC 61.608 63.158 0.00 0.00 0.00 4.79
886 917 7.481169 GCGTCCGAGTCAGATAATTAATACTAC 59.519 40.741 0.00 0.00 0.00 2.73
930 965 6.436261 GCCATTGATGATGTGACTTTCATAG 58.564 40.000 2.41 0.00 32.84 2.23
969 1008 5.391416 GCATTCTACAACTCTTCAGAAAGGC 60.391 44.000 0.00 0.00 33.03 4.35
1019 1062 0.966875 ATGGCGATGGTGCACATGTT 60.967 50.000 20.43 0.00 40.72 2.71
1053 1096 4.168291 CCCTTCCTCTCCGCTGGC 62.168 72.222 0.00 0.00 0.00 4.85
1435 1496 2.280524 CCAACGCCCAGAACGACA 60.281 61.111 0.00 0.00 0.00 4.35
1438 1499 4.681978 ACGCCCAGAACGACAGCC 62.682 66.667 0.00 0.00 0.00 4.85
1476 1537 4.057428 GCCGTCGAGCTGGACACT 62.057 66.667 25.81 0.00 36.73 3.55
1614 1678 3.463944 CGGATTCCATAACGTAAGCCTT 58.536 45.455 3.09 0.00 45.62 4.35
2292 9751 0.248094 GCTATTGCCGGCGAAAAGAC 60.248 55.000 26.05 16.27 0.00 3.01
2369 9828 1.135094 GGCCAAGGAGATGGAGATGA 58.865 55.000 0.00 0.00 43.54 2.92
2395 9854 2.533974 CTTGGACTGGGCTCAGAGGC 62.534 65.000 23.49 15.82 43.49 4.70
2403 9862 1.378250 GGCTCAGAGGCTGCATGTT 60.378 57.895 16.80 0.00 37.85 2.71
2664 10123 2.027625 CGCTTTCGCCTTCGGAACT 61.028 57.895 0.00 0.00 36.13 3.01
2784 10243 4.103103 TCACTCGTCGAGGCAGCG 62.103 66.667 25.25 8.95 33.35 5.18
2814 10273 1.792949 CTGCAACACGAGTACAACTCC 59.207 52.381 0.00 0.00 42.12 3.85
2862 10321 2.433838 CTGCTCTGCTCACACCCG 60.434 66.667 0.00 0.00 0.00 5.28
2917 10376 6.888632 AGTTTTGCACTATCTTGATGGAGAAT 59.111 34.615 1.04 0.00 31.97 2.40
2941 10400 3.758088 CTCCCGGAGATGACACGCG 62.758 68.421 9.01 3.53 0.00 6.01
2951 10410 1.163420 ATGACACGCGCAACCTTGAA 61.163 50.000 5.73 0.00 0.00 2.69
2958 10417 1.334960 CGCGCAACCTTGAACTTCAAT 60.335 47.619 8.75 0.00 35.59 2.57
2972 10431 9.950680 CTTGAACTTCAATTTGTTAGCTCTTAA 57.049 29.630 4.65 0.00 35.59 1.85
2976 10435 8.329203 ACTTCAATTTGTTAGCTCTTAAGGAG 57.671 34.615 1.85 0.38 44.49 3.69
3015 10474 2.028420 TGTCAAGCCCATTCTCATCG 57.972 50.000 0.00 0.00 0.00 3.84
3018 10477 1.134401 TCAAGCCCATTCTCATCGACC 60.134 52.381 0.00 0.00 0.00 4.79
3019 10478 0.911769 AAGCCCATTCTCATCGACCA 59.088 50.000 0.00 0.00 0.00 4.02
3067 10526 0.247460 CTCTGGCGGAAGATGACACA 59.753 55.000 0.00 0.00 0.00 3.72
3072 10531 1.675714 GGCGGAAGATGACACACATGA 60.676 52.381 0.00 0.00 39.56 3.07
3107 10566 8.797266 TTAATACTGTATCATGTACTTGCTCG 57.203 34.615 0.00 0.00 0.00 5.03
3109 10568 5.324784 ACTGTATCATGTACTTGCTCGAA 57.675 39.130 3.90 0.00 0.00 3.71
3174 10633 9.716531 ATTAGGTGACATATGACATGATAAGTG 57.283 33.333 10.38 0.00 0.00 3.16
3175 10634 6.528321 AGGTGACATATGACATGATAAGTGG 58.472 40.000 10.38 0.00 0.00 4.00
3176 10635 6.327365 AGGTGACATATGACATGATAAGTGGA 59.673 38.462 10.38 0.00 0.00 4.02
3177 10636 7.016957 AGGTGACATATGACATGATAAGTGGAT 59.983 37.037 10.38 0.00 0.00 3.41
3178 10637 7.332926 GGTGACATATGACATGATAAGTGGATC 59.667 40.741 10.38 0.00 0.00 3.36
3179 10638 8.093307 GTGACATATGACATGATAAGTGGATCT 58.907 37.037 10.38 0.00 0.00 2.75
3180 10639 8.654094 TGACATATGACATGATAAGTGGATCTT 58.346 33.333 10.38 0.00 39.89 2.40
3181 10640 8.843885 ACATATGACATGATAAGTGGATCTTG 57.156 34.615 10.38 0.00 37.56 3.02
3182 10641 8.435187 ACATATGACATGATAAGTGGATCTTGT 58.565 33.333 10.38 5.02 43.28 3.16
3183 10642 9.281371 CATATGACATGATAAGTGGATCTTGTT 57.719 33.333 0.00 0.00 41.66 2.83
3187 10646 9.764363 TGACATGATAAGTGGATCTTGTTATAC 57.236 33.333 0.00 0.00 41.66 1.47
3188 10647 9.988815 GACATGATAAGTGGATCTTGTTATACT 57.011 33.333 0.00 0.00 41.66 2.12
3239 10698 7.709182 TGATAAGTGGATCTTGTTAACCGTATG 59.291 37.037 2.48 0.00 37.56 2.39
3407 10866 5.992829 TCTTGCATAAGGTTTCGAGTTTACA 59.007 36.000 0.00 0.00 34.59 2.41
3445 10904 5.180492 TGTCGGACATGGTTTAGAATGAAAC 59.820 40.000 6.76 0.00 38.38 2.78
3513 10972 5.183522 GCTACAACTTAGACCACTACACTCT 59.816 44.000 0.00 0.00 0.00 3.24
3533 10993 8.211629 ACACTCTTGGTCTACTTTCAAGTTAAT 58.788 33.333 0.00 0.00 40.37 1.40
3543 11003 4.024048 ACTTTCAAGTTAATCAGCCACACG 60.024 41.667 0.00 0.00 35.21 4.49
3588 11048 1.442184 CACCCAGACTCGTCGAACG 60.442 63.158 0.00 0.00 44.19 3.95
3598 11058 1.805345 CTCGTCGAACGCTCCCTATAT 59.195 52.381 0.00 0.00 42.21 0.86
3602 11062 2.553172 GTCGAACGCTCCCTATATGTCT 59.447 50.000 0.00 0.00 0.00 3.41
3606 11066 0.247736 CGCTCCCTATATGTCTGGGC 59.752 60.000 0.00 0.00 40.69 5.36
3607 11067 1.352083 GCTCCCTATATGTCTGGGCA 58.648 55.000 0.00 0.00 40.69 5.36
3625 11085 1.202580 GCAGATGGCTCGGTTAGTGAT 60.203 52.381 0.00 0.00 40.25 3.06
3649 11109 3.964909 GTCACAAAAACATGACCCAGTC 58.035 45.455 0.00 0.00 39.49 3.51
3650 11110 2.616376 TCACAAAAACATGACCCAGTCG 59.384 45.455 0.00 0.00 34.95 4.18
3651 11111 1.953686 ACAAAAACATGACCCAGTCGG 59.046 47.619 0.00 0.00 34.95 4.79
3662 11122 3.516578 CCAGTCGGGAGTCTCAAAC 57.483 57.895 1.47 0.00 40.01 2.93
3663 11123 0.037232 CCAGTCGGGAGTCTCAAACC 60.037 60.000 1.47 0.00 40.01 3.27
3664 11124 0.679505 CAGTCGGGAGTCTCAAACCA 59.320 55.000 1.47 0.00 0.00 3.67
3665 11125 0.969894 AGTCGGGAGTCTCAAACCAG 59.030 55.000 1.47 0.00 0.00 4.00
3666 11126 0.670854 GTCGGGAGTCTCAAACCAGC 60.671 60.000 1.47 0.00 0.00 4.85
3667 11127 1.376037 CGGGAGTCTCAAACCAGCC 60.376 63.158 1.47 0.00 0.00 4.85
3668 11128 1.761174 GGGAGTCTCAAACCAGCCA 59.239 57.895 1.47 0.00 0.00 4.75
3669 11129 0.329596 GGGAGTCTCAAACCAGCCAT 59.670 55.000 1.47 0.00 0.00 4.40
3670 11130 1.559682 GGGAGTCTCAAACCAGCCATA 59.440 52.381 1.47 0.00 0.00 2.74
3671 11131 2.173569 GGGAGTCTCAAACCAGCCATAT 59.826 50.000 1.47 0.00 0.00 1.78
3672 11132 3.391296 GGGAGTCTCAAACCAGCCATATA 59.609 47.826 1.47 0.00 0.00 0.86
3673 11133 4.042187 GGGAGTCTCAAACCAGCCATATAT 59.958 45.833 1.47 0.00 0.00 0.86
3674 11134 4.999950 GGAGTCTCAAACCAGCCATATATG 59.000 45.833 5.68 5.68 0.00 1.78
3675 11135 5.455326 GGAGTCTCAAACCAGCCATATATGT 60.455 44.000 11.73 0.00 0.00 2.29
3676 11136 6.006275 AGTCTCAAACCAGCCATATATGTT 57.994 37.500 11.73 0.00 0.00 2.71
3677 11137 6.426587 AGTCTCAAACCAGCCATATATGTTT 58.573 36.000 11.73 2.68 0.00 2.83
3678 11138 6.319658 AGTCTCAAACCAGCCATATATGTTTG 59.680 38.462 11.73 13.62 44.31 2.93
3679 11139 5.593909 TCTCAAACCAGCCATATATGTTTGG 59.406 40.000 22.07 22.07 43.55 3.28
3680 11140 4.648762 TCAAACCAGCCATATATGTTTGGG 59.351 41.667 25.05 17.14 43.55 4.12
3681 11141 3.971468 ACCAGCCATATATGTTTGGGT 57.029 42.857 25.05 17.61 44.27 4.51
3682 11142 4.264373 ACCAGCCATATATGTTTGGGTT 57.736 40.909 25.05 11.29 41.63 4.11
3683 11143 3.960102 ACCAGCCATATATGTTTGGGTTG 59.040 43.478 25.05 13.55 41.63 3.77
3684 11144 4.214310 CCAGCCATATATGTTTGGGTTGA 58.786 43.478 18.45 0.00 41.63 3.18
3685 11145 4.037923 CCAGCCATATATGTTTGGGTTGAC 59.962 45.833 18.45 0.00 41.63 3.18
3686 11146 4.037923 CAGCCATATATGTTTGGGTTGACC 59.962 45.833 11.73 0.00 41.63 4.02
3687 11147 3.004315 GCCATATATGTTTGGGTTGACCG 59.996 47.826 11.73 0.00 44.64 4.79
3688 11148 3.568007 CCATATATGTTTGGGTTGACCGG 59.432 47.826 11.73 0.00 44.64 5.28
3689 11149 1.470051 ATATGTTTGGGTTGACCGGC 58.530 50.000 0.00 0.00 44.64 6.13
3690 11150 0.110678 TATGTTTGGGTTGACCGGCA 59.889 50.000 0.00 0.00 44.64 5.69
3691 11151 1.460273 ATGTTTGGGTTGACCGGCAC 61.460 55.000 0.00 0.00 44.64 5.01
3692 11152 2.519780 TTTGGGTTGACCGGCACC 60.520 61.111 0.00 5.26 44.64 5.01
3693 11153 4.589675 TTGGGTTGACCGGCACCC 62.590 66.667 24.43 24.43 44.64 4.61
3696 11156 4.717313 GGTTGACCGGCACCCCTC 62.717 72.222 0.00 0.00 0.00 4.30
3697 11157 3.948719 GTTGACCGGCACCCCTCA 61.949 66.667 0.00 0.00 0.00 3.86
3698 11158 2.933287 TTGACCGGCACCCCTCAT 60.933 61.111 0.00 0.00 0.00 2.90
3699 11159 1.613928 TTGACCGGCACCCCTCATA 60.614 57.895 0.00 0.00 0.00 2.15
3700 11160 0.986019 TTGACCGGCACCCCTCATAT 60.986 55.000 0.00 0.00 0.00 1.78
3701 11161 1.371558 GACCGGCACCCCTCATATC 59.628 63.158 0.00 0.00 0.00 1.63
3702 11162 1.074471 ACCGGCACCCCTCATATCT 60.074 57.895 0.00 0.00 0.00 1.98
3703 11163 0.190069 ACCGGCACCCCTCATATCTA 59.810 55.000 0.00 0.00 0.00 1.98
3704 11164 0.898320 CCGGCACCCCTCATATCTAG 59.102 60.000 0.00 0.00 0.00 2.43
3705 11165 0.247736 CGGCACCCCTCATATCTAGC 59.752 60.000 0.00 0.00 0.00 3.42
3706 11166 0.615850 GGCACCCCTCATATCTAGCC 59.384 60.000 0.00 0.00 0.00 3.93
3707 11167 1.650528 GCACCCCTCATATCTAGCCT 58.349 55.000 0.00 0.00 0.00 4.58
3708 11168 2.559931 GGCACCCCTCATATCTAGCCTA 60.560 54.545 0.00 0.00 37.89 3.93
3709 11169 3.173965 GCACCCCTCATATCTAGCCTAA 58.826 50.000 0.00 0.00 0.00 2.69
3710 11170 3.583086 GCACCCCTCATATCTAGCCTAAA 59.417 47.826 0.00 0.00 0.00 1.85
3711 11171 4.226168 GCACCCCTCATATCTAGCCTAAAT 59.774 45.833 0.00 0.00 0.00 1.40
3712 11172 5.738909 CACCCCTCATATCTAGCCTAAATG 58.261 45.833 0.00 0.00 0.00 2.32
3713 11173 5.249393 CACCCCTCATATCTAGCCTAAATGT 59.751 44.000 0.00 0.00 0.00 2.71
3714 11174 5.249393 ACCCCTCATATCTAGCCTAAATGTG 59.751 44.000 0.00 0.00 0.00 3.21
3715 11175 5.249393 CCCCTCATATCTAGCCTAAATGTGT 59.751 44.000 0.00 0.00 0.00 3.72
3716 11176 6.169094 CCCTCATATCTAGCCTAAATGTGTG 58.831 44.000 0.00 0.00 0.00 3.82
3717 11177 6.239714 CCCTCATATCTAGCCTAAATGTGTGT 60.240 42.308 0.00 0.00 0.00 3.72
3718 11178 6.870965 CCTCATATCTAGCCTAAATGTGTGTC 59.129 42.308 0.00 0.00 0.00 3.67
3719 11179 6.447162 TCATATCTAGCCTAAATGTGTGTCG 58.553 40.000 0.00 0.00 0.00 4.35
3720 11180 3.520290 TCTAGCCTAAATGTGTGTCGG 57.480 47.619 0.00 0.00 0.00 4.79
3721 11181 3.093814 TCTAGCCTAAATGTGTGTCGGA 58.906 45.455 0.00 0.00 0.00 4.55
3722 11182 3.704566 TCTAGCCTAAATGTGTGTCGGAT 59.295 43.478 0.00 0.00 0.00 4.18
3723 11183 4.891168 TCTAGCCTAAATGTGTGTCGGATA 59.109 41.667 0.00 0.00 0.00 2.59
3724 11184 4.689612 AGCCTAAATGTGTGTCGGATAT 57.310 40.909 0.00 0.00 0.00 1.63
3725 11185 4.380531 AGCCTAAATGTGTGTCGGATATG 58.619 43.478 0.00 0.00 0.00 1.78
3726 11186 4.100963 AGCCTAAATGTGTGTCGGATATGA 59.899 41.667 0.00 0.00 0.00 2.15
3727 11187 4.449068 GCCTAAATGTGTGTCGGATATGAG 59.551 45.833 0.00 0.00 0.00 2.90
3728 11188 4.991056 CCTAAATGTGTGTCGGATATGAGG 59.009 45.833 0.00 0.00 0.00 3.86
3729 11189 4.753516 AAATGTGTGTCGGATATGAGGA 57.246 40.909 0.00 0.00 0.00 3.71
3730 11190 4.327982 AATGTGTGTCGGATATGAGGAG 57.672 45.455 0.00 0.00 0.00 3.69
3731 11191 3.012934 TGTGTGTCGGATATGAGGAGA 57.987 47.619 0.00 0.00 0.00 3.71
3732 11192 3.566351 TGTGTGTCGGATATGAGGAGAT 58.434 45.455 0.00 0.00 0.00 2.75
3733 11193 3.570125 TGTGTGTCGGATATGAGGAGATC 59.430 47.826 0.00 0.00 0.00 2.75
3734 11194 2.814336 TGTGTCGGATATGAGGAGATCG 59.186 50.000 0.00 0.00 0.00 3.69
3735 11195 2.162608 GTGTCGGATATGAGGAGATCGG 59.837 54.545 0.00 0.00 0.00 4.18
3736 11196 1.746220 GTCGGATATGAGGAGATCGGG 59.254 57.143 0.00 0.00 0.00 5.14
3737 11197 1.633945 TCGGATATGAGGAGATCGGGA 59.366 52.381 0.00 0.00 0.00 5.14
3738 11198 1.746220 CGGATATGAGGAGATCGGGAC 59.254 57.143 0.00 0.00 0.00 4.46
3757 11217 4.900154 CTCCCGAGCAAGTCTGTC 57.100 61.111 0.00 0.00 0.00 3.51
3758 11218 1.967535 CTCCCGAGCAAGTCTGTCA 59.032 57.895 0.00 0.00 0.00 3.58
3759 11219 0.389166 CTCCCGAGCAAGTCTGTCAC 60.389 60.000 0.00 0.00 0.00 3.67
3760 11220 1.734477 CCCGAGCAAGTCTGTCACG 60.734 63.158 0.00 0.00 0.00 4.35
3761 11221 1.007271 CCGAGCAAGTCTGTCACGT 60.007 57.895 0.00 0.00 0.00 4.49
3762 11222 0.240145 CCGAGCAAGTCTGTCACGTA 59.760 55.000 0.00 0.00 0.00 3.57
3763 11223 1.607713 CGAGCAAGTCTGTCACGTAG 58.392 55.000 0.00 0.00 0.00 3.51
3764 11224 1.729472 CGAGCAAGTCTGTCACGTAGG 60.729 57.143 0.00 0.00 0.00 3.18
3765 11225 1.540267 GAGCAAGTCTGTCACGTAGGA 59.460 52.381 0.00 0.00 0.00 2.94
3766 11226 2.164624 GAGCAAGTCTGTCACGTAGGAT 59.835 50.000 0.00 0.00 0.00 3.24
3767 11227 2.164624 AGCAAGTCTGTCACGTAGGATC 59.835 50.000 0.00 0.00 0.00 3.36
3768 11228 2.164624 GCAAGTCTGTCACGTAGGATCT 59.835 50.000 0.00 0.00 0.00 2.75
3769 11229 3.763902 CAAGTCTGTCACGTAGGATCTG 58.236 50.000 0.00 0.00 0.00 2.90
3770 11230 3.074675 AGTCTGTCACGTAGGATCTGT 57.925 47.619 0.00 0.00 0.00 3.41
3771 11231 3.422796 AGTCTGTCACGTAGGATCTGTT 58.577 45.455 0.00 0.00 0.00 3.16
3772 11232 3.440872 AGTCTGTCACGTAGGATCTGTTC 59.559 47.826 0.00 0.00 0.00 3.18
3773 11233 2.753452 TCTGTCACGTAGGATCTGTTCC 59.247 50.000 0.00 0.00 45.85 3.62
3780 11240 3.195698 GGATCTGTTCCACGCCGC 61.196 66.667 0.00 0.00 44.74 6.53
3781 11241 3.195698 GATCTGTTCCACGCCGCC 61.196 66.667 0.00 0.00 0.00 6.13
3782 11242 4.778143 ATCTGTTCCACGCCGCCC 62.778 66.667 0.00 0.00 0.00 6.13
3797 11257 2.365635 CCCCACTCGACCCCAGAT 60.366 66.667 0.00 0.00 0.00 2.90
3798 11258 1.075525 CCCCACTCGACCCCAGATA 60.076 63.158 0.00 0.00 0.00 1.98
3799 11259 0.471971 CCCCACTCGACCCCAGATAT 60.472 60.000 0.00 0.00 0.00 1.63
3800 11260 1.203137 CCCCACTCGACCCCAGATATA 60.203 57.143 0.00 0.00 0.00 0.86
3801 11261 2.559931 CCCCACTCGACCCCAGATATAT 60.560 54.545 0.00 0.00 0.00 0.86
3802 11262 3.173965 CCCACTCGACCCCAGATATATT 58.826 50.000 0.00 0.00 0.00 1.28
3803 11263 3.195825 CCCACTCGACCCCAGATATATTC 59.804 52.174 0.00 0.00 0.00 1.75
3804 11264 3.119459 CCACTCGACCCCAGATATATTCG 60.119 52.174 0.00 0.00 0.00 3.34
3805 11265 3.506455 CACTCGACCCCAGATATATTCGT 59.494 47.826 3.02 0.00 0.00 3.85
3806 11266 3.757493 ACTCGACCCCAGATATATTCGTC 59.243 47.826 3.02 0.00 0.00 4.20
3807 11267 3.756963 CTCGACCCCAGATATATTCGTCA 59.243 47.826 3.02 0.00 0.00 4.35
3808 11268 3.504906 TCGACCCCAGATATATTCGTCAC 59.495 47.826 3.02 0.00 0.00 3.67
3809 11269 3.367087 CGACCCCAGATATATTCGTCACC 60.367 52.174 0.00 0.00 0.00 4.02
3810 11270 3.576982 GACCCCAGATATATTCGTCACCA 59.423 47.826 0.00 0.00 0.00 4.17
3811 11271 4.168101 ACCCCAGATATATTCGTCACCAT 58.832 43.478 0.00 0.00 0.00 3.55
3812 11272 4.223032 ACCCCAGATATATTCGTCACCATC 59.777 45.833 0.00 0.00 0.00 3.51
3813 11273 4.383118 CCCCAGATATATTCGTCACCATCC 60.383 50.000 0.00 0.00 0.00 3.51
3814 11274 4.424626 CCAGATATATTCGTCACCATCCG 58.575 47.826 0.00 0.00 0.00 4.18
3815 11275 3.859961 CAGATATATTCGTCACCATCCGC 59.140 47.826 0.00 0.00 0.00 5.54
3816 11276 3.509967 AGATATATTCGTCACCATCCGCA 59.490 43.478 0.00 0.00 0.00 5.69
3817 11277 2.839486 ATATTCGTCACCATCCGCAT 57.161 45.000 0.00 0.00 0.00 4.73
3818 11278 2.148916 TATTCGTCACCATCCGCATC 57.851 50.000 0.00 0.00 0.00 3.91
3819 11279 0.532862 ATTCGTCACCATCCGCATCC 60.533 55.000 0.00 0.00 0.00 3.51
3820 11280 2.587322 TTCGTCACCATCCGCATCCC 62.587 60.000 0.00 0.00 0.00 3.85
3821 11281 2.588877 GTCACCATCCGCATCCCG 60.589 66.667 0.00 0.00 0.00 5.14
3839 11299 4.621087 GCCCAAACCCCAGCCACT 62.621 66.667 0.00 0.00 0.00 4.00
3840 11300 2.283173 CCCAAACCCCAGCCACTC 60.283 66.667 0.00 0.00 0.00 3.51
3841 11301 2.283173 CCAAACCCCAGCCACTCC 60.283 66.667 0.00 0.00 0.00 3.85
3842 11302 2.520458 CAAACCCCAGCCACTCCA 59.480 61.111 0.00 0.00 0.00 3.86
3843 11303 1.903404 CAAACCCCAGCCACTCCAC 60.903 63.158 0.00 0.00 0.00 4.02
3844 11304 2.084930 AAACCCCAGCCACTCCACT 61.085 57.895 0.00 0.00 0.00 4.00
3845 11305 2.069165 AAACCCCAGCCACTCCACTC 62.069 60.000 0.00 0.00 0.00 3.51
3846 11306 3.721706 CCCCAGCCACTCCACTCC 61.722 72.222 0.00 0.00 0.00 3.85
3847 11307 2.930019 CCCAGCCACTCCACTCCA 60.930 66.667 0.00 0.00 0.00 3.86
3848 11308 2.348998 CCAGCCACTCCACTCCAC 59.651 66.667 0.00 0.00 0.00 4.02
3849 11309 2.348998 CAGCCACTCCACTCCACC 59.651 66.667 0.00 0.00 0.00 4.61
3850 11310 2.930562 AGCCACTCCACTCCACCC 60.931 66.667 0.00 0.00 0.00 4.61
3851 11311 4.035102 GCCACTCCACTCCACCCC 62.035 72.222 0.00 0.00 0.00 4.95
3852 11312 2.529136 CCACTCCACTCCACCCCA 60.529 66.667 0.00 0.00 0.00 4.96
3853 11313 2.750350 CACTCCACTCCACCCCAC 59.250 66.667 0.00 0.00 0.00 4.61
3854 11314 2.529389 ACTCCACTCCACCCCACC 60.529 66.667 0.00 0.00 0.00 4.61
3855 11315 3.330720 CTCCACTCCACCCCACCC 61.331 72.222 0.00 0.00 0.00 4.61
3856 11316 4.995058 TCCACTCCACCCCACCCC 62.995 72.222 0.00 0.00 0.00 4.95
3859 11319 4.542627 ACTCCACCCCACCCCCAA 62.543 66.667 0.00 0.00 0.00 4.12
3860 11320 3.661648 CTCCACCCCACCCCCAAG 61.662 72.222 0.00 0.00 0.00 3.61
3863 11323 4.366684 CACCCCACCCCCAAGCTC 62.367 72.222 0.00 0.00 0.00 4.09
3866 11326 3.350163 CCCACCCCCAAGCTCCAT 61.350 66.667 0.00 0.00 0.00 3.41
3867 11327 2.772924 CCACCCCCAAGCTCCATT 59.227 61.111 0.00 0.00 0.00 3.16
3868 11328 1.079073 CCACCCCCAAGCTCCATTT 59.921 57.895 0.00 0.00 0.00 2.32
3869 11329 0.972471 CCACCCCCAAGCTCCATTTC 60.972 60.000 0.00 0.00 0.00 2.17
3870 11330 0.251742 CACCCCCAAGCTCCATTTCA 60.252 55.000 0.00 0.00 0.00 2.69
3871 11331 0.486879 ACCCCCAAGCTCCATTTCAA 59.513 50.000 0.00 0.00 0.00 2.69
3872 11332 0.897621 CCCCCAAGCTCCATTTCAAC 59.102 55.000 0.00 0.00 0.00 3.18
3873 11333 0.527565 CCCCAAGCTCCATTTCAACG 59.472 55.000 0.00 0.00 0.00 4.10
3874 11334 1.533625 CCCAAGCTCCATTTCAACGA 58.466 50.000 0.00 0.00 0.00 3.85
3875 11335 2.094675 CCCAAGCTCCATTTCAACGAT 58.905 47.619 0.00 0.00 0.00 3.73
3876 11336 2.098117 CCCAAGCTCCATTTCAACGATC 59.902 50.000 0.00 0.00 0.00 3.69
3877 11337 3.012518 CCAAGCTCCATTTCAACGATCT 58.987 45.455 0.00 0.00 0.00 2.75
3878 11338 3.064545 CCAAGCTCCATTTCAACGATCTC 59.935 47.826 0.00 0.00 0.00 2.75
3879 11339 2.911484 AGCTCCATTTCAACGATCTCC 58.089 47.619 0.00 0.00 0.00 3.71
3880 11340 1.594862 GCTCCATTTCAACGATCTCCG 59.405 52.381 0.00 0.00 45.44 4.63
3881 11341 2.738643 GCTCCATTTCAACGATCTCCGA 60.739 50.000 0.00 0.00 41.76 4.55
3882 11342 2.860735 CTCCATTTCAACGATCTCCGAC 59.139 50.000 0.00 0.00 41.76 4.79
3883 11343 2.232696 TCCATTTCAACGATCTCCGACA 59.767 45.455 0.00 0.00 41.76 4.35
3884 11344 3.118775 TCCATTTCAACGATCTCCGACAT 60.119 43.478 0.00 0.00 41.76 3.06
3885 11345 3.001634 CCATTTCAACGATCTCCGACATG 59.998 47.826 0.00 0.00 41.76 3.21
3886 11346 3.313012 TTTCAACGATCTCCGACATGT 57.687 42.857 0.00 0.00 41.76 3.21
3887 11347 3.313012 TTCAACGATCTCCGACATGTT 57.687 42.857 0.00 0.00 41.76 2.71
3888 11348 4.443913 TTCAACGATCTCCGACATGTTA 57.556 40.909 0.00 0.00 41.76 2.41
3889 11349 4.028852 TCAACGATCTCCGACATGTTAG 57.971 45.455 0.00 0.00 41.76 2.34
3890 11350 3.116300 CAACGATCTCCGACATGTTAGG 58.884 50.000 13.34 13.34 41.76 2.69
3891 11351 1.067212 ACGATCTCCGACATGTTAGGC 59.933 52.381 14.38 2.69 41.76 3.93
3892 11352 1.067060 CGATCTCCGACATGTTAGGCA 59.933 52.381 14.38 6.02 41.76 4.75
3893 11353 2.748605 GATCTCCGACATGTTAGGCAG 58.251 52.381 14.38 12.50 0.00 4.85
3894 11354 0.175760 TCTCCGACATGTTAGGCAGC 59.824 55.000 14.38 0.00 0.00 5.25
3895 11355 1.148157 CTCCGACATGTTAGGCAGCG 61.148 60.000 14.38 5.35 0.00 5.18
3896 11356 2.173669 CCGACATGTTAGGCAGCGG 61.174 63.158 0.00 2.22 35.21 5.52
3897 11357 1.153647 CGACATGTTAGGCAGCGGA 60.154 57.895 0.00 0.00 0.00 5.54
3898 11358 0.530650 CGACATGTTAGGCAGCGGAT 60.531 55.000 0.00 0.00 0.00 4.18
3899 11359 1.221414 GACATGTTAGGCAGCGGATC 58.779 55.000 0.00 0.00 0.00 3.36
3900 11360 0.179045 ACATGTTAGGCAGCGGATCC 60.179 55.000 0.00 0.00 0.00 3.36
3901 11361 1.069765 ATGTTAGGCAGCGGATCCG 59.930 57.895 30.03 30.03 43.09 4.18
3902 11362 1.399744 ATGTTAGGCAGCGGATCCGA 61.400 55.000 37.64 12.99 42.83 4.55
3903 11363 1.591863 GTTAGGCAGCGGATCCGAC 60.592 63.158 37.64 26.43 42.83 4.79
3904 11364 1.756950 TTAGGCAGCGGATCCGACT 60.757 57.895 37.64 28.14 42.83 4.18
3905 11365 1.735376 TTAGGCAGCGGATCCGACTC 61.735 60.000 37.64 22.36 42.83 3.36
3906 11366 4.593864 GGCAGCGGATCCGACTCC 62.594 72.222 37.64 26.74 42.83 3.85
3913 11373 3.332706 GGATCCGACTCCGAGATCT 57.667 57.895 1.33 0.00 39.83 2.75
3914 11374 1.161843 GGATCCGACTCCGAGATCTC 58.838 60.000 13.05 13.05 39.83 2.75
3915 11375 1.161843 GATCCGACTCCGAGATCTCC 58.838 60.000 17.13 1.59 38.39 3.71
3916 11376 0.768622 ATCCGACTCCGAGATCTCCT 59.231 55.000 17.13 0.00 38.22 3.69
3917 11377 0.179043 TCCGACTCCGAGATCTCCTG 60.179 60.000 17.13 8.71 38.22 3.86
3918 11378 0.179043 CCGACTCCGAGATCTCCTGA 60.179 60.000 17.13 12.43 38.22 3.86
3919 11379 1.544537 CCGACTCCGAGATCTCCTGAT 60.545 57.143 17.13 0.55 38.22 2.90
3920 11380 2.226330 CGACTCCGAGATCTCCTGATT 58.774 52.381 17.13 8.12 38.22 2.57
3921 11381 3.403968 CGACTCCGAGATCTCCTGATTA 58.596 50.000 17.13 0.00 38.22 1.75
3922 11382 3.435327 CGACTCCGAGATCTCCTGATTAG 59.565 52.174 17.13 7.85 38.22 1.73
3923 11383 4.394729 GACTCCGAGATCTCCTGATTAGT 58.605 47.826 17.13 10.67 32.19 2.24
3924 11384 4.394729 ACTCCGAGATCTCCTGATTAGTC 58.605 47.826 17.13 0.00 32.19 2.59
3925 11385 3.403968 TCCGAGATCTCCTGATTAGTCG 58.596 50.000 17.13 2.06 33.92 4.18
3926 11386 3.071167 TCCGAGATCTCCTGATTAGTCGA 59.929 47.826 17.13 0.00 35.01 4.20
3927 11387 3.187637 CCGAGATCTCCTGATTAGTCGAC 59.812 52.174 17.13 7.70 35.01 4.20
3928 11388 4.062293 CGAGATCTCCTGATTAGTCGACT 58.938 47.826 23.66 23.66 35.01 4.18
3929 11389 4.084066 CGAGATCTCCTGATTAGTCGACTG 60.084 50.000 28.12 10.56 35.01 3.51
3930 11390 4.141287 AGATCTCCTGATTAGTCGACTGG 58.859 47.826 28.12 19.29 32.19 4.00
3931 11391 2.656002 TCTCCTGATTAGTCGACTGGG 58.344 52.381 28.12 19.21 0.00 4.45
3932 11392 1.683917 CTCCTGATTAGTCGACTGGGG 59.316 57.143 28.12 16.00 0.00 4.96
3933 11393 0.105039 CCTGATTAGTCGACTGGGGC 59.895 60.000 28.12 14.25 0.00 5.80
3934 11394 0.824109 CTGATTAGTCGACTGGGGCA 59.176 55.000 28.12 17.70 0.00 5.36
3935 11395 1.414181 CTGATTAGTCGACTGGGGCAT 59.586 52.381 28.12 11.39 0.00 4.40
3936 11396 1.412710 TGATTAGTCGACTGGGGCATC 59.587 52.381 28.12 18.68 0.00 3.91
3937 11397 0.389391 ATTAGTCGACTGGGGCATCG 59.611 55.000 28.12 0.00 39.72 3.84
3938 11398 0.968901 TTAGTCGACTGGGGCATCGT 60.969 55.000 28.12 0.00 39.38 3.73
3939 11399 1.381928 TAGTCGACTGGGGCATCGTC 61.382 60.000 28.12 0.00 39.38 4.20
3940 11400 3.458163 TCGACTGGGGCATCGTCC 61.458 66.667 0.00 0.00 39.38 4.79
3947 11407 2.516930 GGGCATCGTCCCATGTGG 60.517 66.667 5.50 0.00 45.82 4.17
3957 11417 2.903357 CCATGTGGGGACGAGGAG 59.097 66.667 0.00 0.00 0.00 3.69
3958 11418 2.735772 CCATGTGGGGACGAGGAGG 61.736 68.421 0.00 0.00 0.00 4.30
3959 11419 3.083997 ATGTGGGGACGAGGAGGC 61.084 66.667 0.00 0.00 0.00 4.70
3962 11422 4.458829 TGGGGACGAGGAGGCGAT 62.459 66.667 0.00 0.00 34.83 4.58
3963 11423 3.917760 GGGGACGAGGAGGCGATG 61.918 72.222 0.00 0.00 34.83 3.84
3964 11424 3.917760 GGGACGAGGAGGCGATGG 61.918 72.222 0.00 0.00 34.83 3.51
3965 11425 3.148279 GGACGAGGAGGCGATGGT 61.148 66.667 0.00 0.00 34.83 3.55
3966 11426 2.413765 GACGAGGAGGCGATGGTC 59.586 66.667 0.00 0.00 34.83 4.02
3967 11427 3.471244 GACGAGGAGGCGATGGTCG 62.471 68.421 0.00 0.00 43.89 4.79
3968 11428 3.518998 CGAGGAGGCGATGGTCGT 61.519 66.667 1.11 0.00 42.81 4.34
4009 11469 4.390556 AGGAGGAGTGAGCCCGCT 62.391 66.667 0.00 0.00 35.50 5.52
4027 11487 4.450419 CCCGCTCACAATTAGAGATTGATC 59.550 45.833 10.39 0.00 35.09 2.92
4029 11489 4.450419 CGCTCACAATTAGAGATTGATCCC 59.550 45.833 10.39 0.00 35.09 3.85
4046 11506 1.434696 CCGCTGGAATCCATTGCAC 59.565 57.895 12.98 0.00 34.36 4.57
4047 11507 1.434696 CGCTGGAATCCATTGCACC 59.565 57.895 12.98 0.00 34.36 5.01
4049 11509 1.031571 GCTGGAATCCATTGCACCGA 61.032 55.000 0.87 0.00 34.36 4.69
4050 11510 1.683943 CTGGAATCCATTGCACCGAT 58.316 50.000 0.87 0.00 34.36 4.18
4051 11511 1.335810 CTGGAATCCATTGCACCGATG 59.664 52.381 0.87 0.00 34.36 3.84
4061 11521 4.075997 CACCGATGCAAAATGGCG 57.924 55.556 0.00 0.00 36.28 5.69
4062 11522 2.160221 CACCGATGCAAAATGGCGC 61.160 57.895 0.00 0.00 36.28 6.53
4063 11523 2.342650 ACCGATGCAAAATGGCGCT 61.343 52.632 7.64 0.00 36.28 5.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.334671 CCTCATTTAACTCCTCTCCTTTAACAC 59.665 40.741 0.00 0.00 0.00 3.32
1 2 7.236847 TCCTCATTTAACTCCTCTCCTTTAACA 59.763 37.037 0.00 0.00 0.00 2.41
3 4 7.678598 TCTCCTCATTTAACTCCTCTCCTTTAA 59.321 37.037 0.00 0.00 0.00 1.52
4 5 7.189794 TCTCCTCATTTAACTCCTCTCCTTTA 58.810 38.462 0.00 0.00 0.00 1.85
5 6 6.026186 TCTCCTCATTTAACTCCTCTCCTTT 58.974 40.000 0.00 0.00 0.00 3.11
6 7 5.594777 TCTCCTCATTTAACTCCTCTCCTT 58.405 41.667 0.00 0.00 0.00 3.36
7 8 5.043732 TCTCTCCTCATTTAACTCCTCTCCT 60.044 44.000 0.00 0.00 0.00 3.69
8 9 5.205056 TCTCTCCTCATTTAACTCCTCTCC 58.795 45.833 0.00 0.00 0.00 3.71
9 10 6.126409 TCTCTCTCCTCATTTAACTCCTCTC 58.874 44.000 0.00 0.00 0.00 3.20
10 11 6.086011 TCTCTCTCCTCATTTAACTCCTCT 57.914 41.667 0.00 0.00 0.00 3.69
11 12 6.605594 TCTTCTCTCTCCTCATTTAACTCCTC 59.394 42.308 0.00 0.00 0.00 3.71
12 13 6.379988 GTCTTCTCTCTCCTCATTTAACTCCT 59.620 42.308 0.00 0.00 0.00 3.69
13 14 6.379988 AGTCTTCTCTCTCCTCATTTAACTCC 59.620 42.308 0.00 0.00 0.00 3.85
14 15 7.404671 AGTCTTCTCTCTCCTCATTTAACTC 57.595 40.000 0.00 0.00 0.00 3.01
15 16 8.887264 TTAGTCTTCTCTCTCCTCATTTAACT 57.113 34.615 0.00 0.00 0.00 2.24
16 17 9.744468 GATTAGTCTTCTCTCTCCTCATTTAAC 57.256 37.037 0.00 0.00 0.00 2.01
17 18 8.919145 GGATTAGTCTTCTCTCTCCTCATTTAA 58.081 37.037 0.00 0.00 0.00 1.52
18 19 8.061920 TGGATTAGTCTTCTCTCTCCTCATTTA 58.938 37.037 0.00 0.00 0.00 1.40
19 20 6.900186 TGGATTAGTCTTCTCTCTCCTCATTT 59.100 38.462 0.00 0.00 0.00 2.32
20 21 6.323739 GTGGATTAGTCTTCTCTCTCCTCATT 59.676 42.308 0.00 0.00 0.00 2.57
21 22 5.833131 GTGGATTAGTCTTCTCTCTCCTCAT 59.167 44.000 0.00 0.00 0.00 2.90
22 23 5.197451 GTGGATTAGTCTTCTCTCTCCTCA 58.803 45.833 0.00 0.00 0.00 3.86
23 24 5.197451 TGTGGATTAGTCTTCTCTCTCCTC 58.803 45.833 0.00 0.00 0.00 3.71
24 25 5.199982 TGTGGATTAGTCTTCTCTCTCCT 57.800 43.478 0.00 0.00 0.00 3.69
25 26 6.478512 AATGTGGATTAGTCTTCTCTCTCC 57.521 41.667 0.00 0.00 0.00 3.71
26 27 9.528018 CTAAAATGTGGATTAGTCTTCTCTCTC 57.472 37.037 0.00 0.00 0.00 3.20
27 28 9.041354 ACTAAAATGTGGATTAGTCTTCTCTCT 57.959 33.333 0.00 0.00 37.73 3.10
30 31 9.535878 CCTACTAAAATGTGGATTAGTCTTCTC 57.464 37.037 1.78 0.00 40.53 2.87
31 32 8.487028 CCCTACTAAAATGTGGATTAGTCTTCT 58.513 37.037 1.78 0.00 40.53 2.85
32 33 7.715686 CCCCTACTAAAATGTGGATTAGTCTTC 59.284 40.741 1.78 0.00 40.53 2.87
33 34 7.184022 ACCCCTACTAAAATGTGGATTAGTCTT 59.816 37.037 1.78 0.00 40.53 3.01
34 35 6.677076 ACCCCTACTAAAATGTGGATTAGTCT 59.323 38.462 1.78 0.00 40.53 3.24
35 36 6.896883 ACCCCTACTAAAATGTGGATTAGTC 58.103 40.000 1.78 0.00 40.53 2.59
36 37 6.903340 ACCCCTACTAAAATGTGGATTAGT 57.097 37.500 3.93 3.93 43.05 2.24
37 38 7.222161 GGTACCCCTACTAAAATGTGGATTAG 58.778 42.308 0.00 0.00 35.67 1.73
38 39 7.140522 GGTACCCCTACTAAAATGTGGATTA 57.859 40.000 0.00 0.00 0.00 1.75
39 40 6.009908 GGTACCCCTACTAAAATGTGGATT 57.990 41.667 0.00 0.00 0.00 3.01
40 41 5.641789 GGTACCCCTACTAAAATGTGGAT 57.358 43.478 0.00 0.00 0.00 3.41
76 77 9.011095 GGGCTAAAACTAGTTTTGAGACTAAAT 57.989 33.333 33.75 13.62 42.18 1.40
77 78 7.446319 GGGGCTAAAACTAGTTTTGAGACTAAA 59.554 37.037 33.75 16.57 42.18 1.85
78 79 6.938596 GGGGCTAAAACTAGTTTTGAGACTAA 59.061 38.462 33.75 17.17 42.18 2.24
79 80 6.271624 AGGGGCTAAAACTAGTTTTGAGACTA 59.728 38.462 33.75 17.77 42.18 2.59
80 81 5.073280 AGGGGCTAAAACTAGTTTTGAGACT 59.927 40.000 33.75 23.58 42.18 3.24
81 82 5.314529 AGGGGCTAAAACTAGTTTTGAGAC 58.685 41.667 33.75 27.33 42.18 3.36
82 83 5.309806 AGAGGGGCTAAAACTAGTTTTGAGA 59.690 40.000 33.75 18.98 42.18 3.27
83 84 5.561679 AGAGGGGCTAAAACTAGTTTTGAG 58.438 41.667 33.75 26.55 42.18 3.02
84 85 5.578157 AGAGGGGCTAAAACTAGTTTTGA 57.422 39.130 33.75 20.41 42.18 2.69
85 86 6.650427 AAAGAGGGGCTAAAACTAGTTTTG 57.350 37.500 33.75 25.36 42.18 2.44
86 87 7.524290 ACTAAAGAGGGGCTAAAACTAGTTTT 58.476 34.615 30.62 30.62 44.16 2.43
87 88 7.087895 ACTAAAGAGGGGCTAAAACTAGTTT 57.912 36.000 15.22 15.22 0.00 2.66
88 89 6.271624 TGACTAAAGAGGGGCTAAAACTAGTT 59.728 38.462 1.12 1.12 0.00 2.24
89 90 5.783875 TGACTAAAGAGGGGCTAAAACTAGT 59.216 40.000 0.00 0.00 0.00 2.57
90 91 6.295719 TGACTAAAGAGGGGCTAAAACTAG 57.704 41.667 0.00 0.00 0.00 2.57
91 92 5.189145 CCTGACTAAAGAGGGGCTAAAACTA 59.811 44.000 0.00 0.00 0.00 2.24
92 93 4.019231 CCTGACTAAAGAGGGGCTAAAACT 60.019 45.833 0.00 0.00 0.00 2.66
93 94 4.262617 CCTGACTAAAGAGGGGCTAAAAC 58.737 47.826 0.00 0.00 0.00 2.43
94 95 3.265995 CCCTGACTAAAGAGGGGCTAAAA 59.734 47.826 0.00 0.00 44.88 1.52
95 96 2.844348 CCCTGACTAAAGAGGGGCTAAA 59.156 50.000 0.00 0.00 44.88 1.85
96 97 2.478292 CCCTGACTAAAGAGGGGCTAA 58.522 52.381 0.00 0.00 44.88 3.09
97 98 2.176247 CCCTGACTAAAGAGGGGCTA 57.824 55.000 0.00 0.00 44.88 3.93
98 99 3.013682 CCCTGACTAAAGAGGGGCT 57.986 57.895 0.00 0.00 44.88 5.19
102 103 1.280457 AGCACCCCTGACTAAAGAGG 58.720 55.000 0.00 0.00 0.00 3.69
103 104 2.616510 CCAAGCACCCCTGACTAAAGAG 60.617 54.545 0.00 0.00 0.00 2.85
104 105 1.351017 CCAAGCACCCCTGACTAAAGA 59.649 52.381 0.00 0.00 0.00 2.52
105 106 1.351017 TCCAAGCACCCCTGACTAAAG 59.649 52.381 0.00 0.00 0.00 1.85
106 107 1.440618 TCCAAGCACCCCTGACTAAA 58.559 50.000 0.00 0.00 0.00 1.85
107 108 1.073284 GTTCCAAGCACCCCTGACTAA 59.927 52.381 0.00 0.00 0.00 2.24
108 109 0.690762 GTTCCAAGCACCCCTGACTA 59.309 55.000 0.00 0.00 0.00 2.59
109 110 1.062488 AGTTCCAAGCACCCCTGACT 61.062 55.000 0.00 0.00 0.00 3.41
110 111 0.178990 AAGTTCCAAGCACCCCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
111 112 0.555769 AAAGTTCCAAGCACCCCTGA 59.444 50.000 0.00 0.00 0.00 3.86
112 113 2.162681 CTAAAGTTCCAAGCACCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
113 114 1.547901 GCTAAAGTTCCAAGCACCCCT 60.548 52.381 0.00 0.00 36.26 4.79
114 115 0.888619 GCTAAAGTTCCAAGCACCCC 59.111 55.000 0.00 0.00 36.26 4.95
115 116 0.888619 GGCTAAAGTTCCAAGCACCC 59.111 55.000 7.02 0.00 38.01 4.61
116 117 1.813178 GAGGCTAAAGTTCCAAGCACC 59.187 52.381 0.00 0.00 38.01 5.01
117 118 2.784347 AGAGGCTAAAGTTCCAAGCAC 58.216 47.619 0.00 2.09 38.01 4.40
118 119 3.508845 AAGAGGCTAAAGTTCCAAGCA 57.491 42.857 0.00 0.00 38.01 3.91
119 120 5.959618 TTTAAGAGGCTAAAGTTCCAAGC 57.040 39.130 0.00 0.00 35.47 4.01
120 121 8.076781 GTCTTTTTAAGAGGCTAAAGTTCCAAG 58.923 37.037 6.60 0.00 38.41 3.61
121 122 7.778382 AGTCTTTTTAAGAGGCTAAAGTTCCAA 59.222 33.333 6.60 0.00 38.41 3.53
122 123 7.287810 AGTCTTTTTAAGAGGCTAAAGTTCCA 58.712 34.615 6.60 0.00 38.41 3.53
123 124 7.747155 AGTCTTTTTAAGAGGCTAAAGTTCC 57.253 36.000 6.60 0.00 38.41 3.62
175 176 1.965414 TAGAGGGTGCTTGGATCCAA 58.035 50.000 25.53 25.53 0.00 3.53
176 177 1.965414 TTAGAGGGTGCTTGGATCCA 58.035 50.000 11.44 11.44 0.00 3.41
177 178 3.117888 TGATTTAGAGGGTGCTTGGATCC 60.118 47.826 4.20 4.20 0.00 3.36
178 179 4.133078 CTGATTTAGAGGGTGCTTGGATC 58.867 47.826 0.00 0.00 0.00 3.36
179 180 3.117738 CCTGATTTAGAGGGTGCTTGGAT 60.118 47.826 0.00 0.00 0.00 3.41
180 181 2.239654 CCTGATTTAGAGGGTGCTTGGA 59.760 50.000 0.00 0.00 0.00 3.53
181 182 2.648059 CCTGATTTAGAGGGTGCTTGG 58.352 52.381 0.00 0.00 0.00 3.61
182 183 2.019984 GCCTGATTTAGAGGGTGCTTG 58.980 52.381 0.00 0.00 0.00 4.01
183 184 1.635487 TGCCTGATTTAGAGGGTGCTT 59.365 47.619 0.00 0.00 0.00 3.91
184 185 1.065126 GTGCCTGATTTAGAGGGTGCT 60.065 52.381 0.00 0.00 0.00 4.40
185 186 1.340017 TGTGCCTGATTTAGAGGGTGC 60.340 52.381 0.00 0.00 0.00 5.01
186 187 2.787473 TGTGCCTGATTTAGAGGGTG 57.213 50.000 0.00 0.00 0.00 4.61
187 188 3.010584 ACAATGTGCCTGATTTAGAGGGT 59.989 43.478 0.00 0.00 0.00 4.34
188 189 3.624777 ACAATGTGCCTGATTTAGAGGG 58.375 45.455 0.00 0.00 0.00 4.30
189 190 4.271049 CGTACAATGTGCCTGATTTAGAGG 59.729 45.833 0.00 0.00 0.00 3.69
190 191 4.870426 ACGTACAATGTGCCTGATTTAGAG 59.130 41.667 0.00 0.00 0.00 2.43
191 192 4.827692 ACGTACAATGTGCCTGATTTAGA 58.172 39.130 0.00 0.00 0.00 2.10
192 193 4.629634 TGACGTACAATGTGCCTGATTTAG 59.370 41.667 0.00 0.00 0.00 1.85
206 207 2.371910 TCGGATGCATTGACGTACAA 57.628 45.000 15.66 0.00 42.95 2.41
212 213 6.198966 GGTTGATTTATTTCGGATGCATTGAC 59.801 38.462 0.00 0.00 0.00 3.18
297 301 0.108585 AACAAGGGTGTCGCATCAGT 59.891 50.000 0.00 0.00 36.80 3.41
328 336 8.359642 TGTTTTGGATCAGAGGAAAATTTAGTG 58.640 33.333 0.00 0.00 0.00 2.74
343 351 3.005684 GTGGCAACTGATGTTTTGGATCA 59.994 43.478 0.00 0.00 33.52 2.92
345 353 3.233507 AGTGGCAACTGATGTTTTGGAT 58.766 40.909 0.00 0.00 34.48 3.41
362 370 1.004080 CAGGTCAGGCTCACAGTGG 60.004 63.158 0.00 0.00 0.00 4.00
411 419 0.541863 CCGTCTGGCTGGAATAAGGT 59.458 55.000 0.00 0.00 0.00 3.50
420 428 6.160749 TTGATTAACAATGCCGTCTGGCTG 62.161 45.833 7.91 1.01 46.83 4.85
421 429 4.122547 TTGATTAACAATGCCGTCTGGCT 61.123 43.478 7.91 0.00 46.83 4.75
422 430 2.163412 TTGATTAACAATGCCGTCTGGC 59.837 45.455 0.00 0.00 46.86 4.85
441 449 2.927477 GTGGCATGCTGTTGATTGATTG 59.073 45.455 18.92 0.00 0.00 2.67
530 541 8.465201 GCCAACTCTTCTTGATCTTATCATTTT 58.535 33.333 0.00 0.00 39.39 1.82
537 559 3.260884 ACCGCCAACTCTTCTTGATCTTA 59.739 43.478 0.00 0.00 0.00 2.10
538 560 2.039084 ACCGCCAACTCTTCTTGATCTT 59.961 45.455 0.00 0.00 0.00 2.40
539 561 1.625818 ACCGCCAACTCTTCTTGATCT 59.374 47.619 0.00 0.00 0.00 2.75
540 562 2.100605 ACCGCCAACTCTTCTTGATC 57.899 50.000 0.00 0.00 0.00 2.92
541 563 2.567615 AGTACCGCCAACTCTTCTTGAT 59.432 45.455 0.00 0.00 0.00 2.57
542 564 1.968493 AGTACCGCCAACTCTTCTTGA 59.032 47.619 0.00 0.00 0.00 3.02
543 565 2.288825 TGAGTACCGCCAACTCTTCTTG 60.289 50.000 10.22 0.00 43.13 3.02
544 566 1.968493 TGAGTACCGCCAACTCTTCTT 59.032 47.619 10.22 0.00 43.13 2.52
545 567 1.629043 TGAGTACCGCCAACTCTTCT 58.371 50.000 10.22 0.00 43.13 2.85
546 568 2.166664 AGATGAGTACCGCCAACTCTTC 59.833 50.000 13.43 13.43 43.13 2.87
547 569 2.180276 AGATGAGTACCGCCAACTCTT 58.820 47.619 10.22 5.31 43.13 2.85
548 570 1.853963 AGATGAGTACCGCCAACTCT 58.146 50.000 10.22 0.00 43.13 3.24
590 612 7.333672 GTGGGTGTAATAAAAGTCTGGTCTAAG 59.666 40.741 0.00 0.00 0.00 2.18
591 613 7.163441 GTGGGTGTAATAAAAGTCTGGTCTAA 58.837 38.462 0.00 0.00 0.00 2.10
593 615 5.072600 TGTGGGTGTAATAAAAGTCTGGTCT 59.927 40.000 0.00 0.00 0.00 3.85
594 616 5.180680 GTGTGGGTGTAATAAAAGTCTGGTC 59.819 44.000 0.00 0.00 0.00 4.02
597 619 5.334879 GCTGTGTGGGTGTAATAAAAGTCTG 60.335 44.000 0.00 0.00 0.00 3.51
598 620 4.760204 GCTGTGTGGGTGTAATAAAAGTCT 59.240 41.667 0.00 0.00 0.00 3.24
649 676 2.183300 GCTACCATGACGACGCCA 59.817 61.111 0.00 0.00 0.00 5.69
708 735 2.352715 GGGAGAAAAATGCAGGAAACGG 60.353 50.000 0.00 0.00 0.00 4.44
837 868 0.038526 AGTGTGAACCGATGACCGAC 60.039 55.000 0.00 0.00 41.76 4.79
838 869 0.038618 CAGTGTGAACCGATGACCGA 60.039 55.000 0.00 0.00 41.76 4.69
839 870 1.626654 GCAGTGTGAACCGATGACCG 61.627 60.000 0.00 0.00 38.18 4.79
844 875 2.029288 CGCAGCAGTGTGAACCGAT 61.029 57.895 0.00 0.00 36.14 4.18
865 896 9.828852 GGACAGTAGTATTAATTATCTGACTCG 57.171 37.037 12.88 0.00 0.00 4.18
886 917 2.096496 GCGGACTGATTTCATTGGACAG 59.904 50.000 0.00 0.00 35.14 3.51
969 1008 0.109086 ACTGATGAAGTGACGAGGCG 60.109 55.000 0.00 0.00 37.88 5.52
1019 1062 0.266152 GGGGATCAGGAGGAGGAAGA 59.734 60.000 0.00 0.00 0.00 2.87
1053 1096 2.648059 GGTGGAAGTGGAAGGATGATG 58.352 52.381 0.00 0.00 0.00 3.07
1284 1345 1.139947 GAAGGCGACCGAGAAGGAG 59.860 63.158 0.00 0.00 45.00 3.69
1596 1660 5.701290 GCTGATAAGGCTTACGTTATGGAAT 59.299 40.000 9.55 0.00 37.07 3.01
1734 1798 2.022129 CAGCACGGTCGACAGGTTC 61.022 63.158 19.84 10.16 0.00 3.62
1886 1950 3.650950 GAGGCTTGGACCCCAGCA 61.651 66.667 13.22 0.00 33.81 4.41
2292 9751 2.333926 TCGTACACCAAAATGAGCTCG 58.666 47.619 9.64 0.00 0.00 5.03
2369 9828 2.529744 GCCCAGTCCAAGGTGAGGT 61.530 63.158 0.00 0.00 0.00 3.85
2395 9854 2.355756 CGACCCCTTTGATAACATGCAG 59.644 50.000 0.00 0.00 0.00 4.41
2403 9862 1.339631 CCACAAGCGACCCCTTTGATA 60.340 52.381 0.00 0.00 0.00 2.15
2604 10063 1.313812 CCGTTCTCACTAGCTCCGGT 61.314 60.000 0.00 0.00 0.00 5.28
2664 10123 1.536766 CAAGCAACCTCGAGCATGAAA 59.463 47.619 16.95 0.00 31.63 2.69
2697 10156 1.808945 CCTTGCTCGTCTTGCTTGATT 59.191 47.619 0.00 0.00 0.00 2.57
2784 10243 1.885871 GTGTTGCAGCCTTGGATCC 59.114 57.895 4.20 4.20 0.00 3.36
2814 10273 3.126831 GAGAATTAGGCACACCTCATCG 58.873 50.000 0.00 0.00 46.34 3.84
2862 10321 2.270527 GGCCTTGCAGAGGGAGAC 59.729 66.667 14.32 1.23 46.40 3.36
2901 10360 5.374921 AGTGGCAATTCTCCATCAAGATAG 58.625 41.667 0.00 0.00 35.81 2.08
2917 10376 1.612146 TCATCTCCGGGAGTGGCAA 60.612 57.895 22.88 4.36 0.00 4.52
2941 10400 6.292328 GCTAACAAATTGAAGTTCAAGGTTGC 60.292 38.462 28.19 24.45 40.05 4.17
2951 10410 8.157476 TCTCCTTAAGAGCTAACAAATTGAAGT 58.843 33.333 3.36 0.00 42.90 3.01
2972 10431 3.308046 GGAATGCAACTCCTTTCTCTCCT 60.308 47.826 10.30 0.00 0.00 3.69
2976 10435 4.367386 CATGGAATGCAACTCCTTTCTC 57.633 45.455 16.76 0.15 37.62 2.87
3030 10489 2.042464 GAGAGGTCAGATATGGTGCCA 58.958 52.381 0.00 0.00 0.00 4.92
3088 10547 6.699204 AGAATTCGAGCAAGTACATGATACAG 59.301 38.462 0.00 0.00 0.00 2.74
3148 10607 9.716531 CACTTATCATGTCATATGTCACCTAAT 57.283 33.333 4.73 0.57 0.00 1.73
3149 10608 8.150296 CCACTTATCATGTCATATGTCACCTAA 58.850 37.037 4.73 3.57 0.00 2.69
3150 10609 7.508977 TCCACTTATCATGTCATATGTCACCTA 59.491 37.037 4.73 0.00 0.00 3.08
3151 10610 6.327365 TCCACTTATCATGTCATATGTCACCT 59.673 38.462 4.73 0.00 0.00 4.00
3152 10611 6.524734 TCCACTTATCATGTCATATGTCACC 58.475 40.000 4.73 0.00 0.00 4.02
3153 10612 8.093307 AGATCCACTTATCATGTCATATGTCAC 58.907 37.037 4.73 0.00 0.00 3.67
3154 10613 8.198807 AGATCCACTTATCATGTCATATGTCA 57.801 34.615 5.11 5.11 0.00 3.58
3155 10614 8.933807 CAAGATCCACTTATCATGTCATATGTC 58.066 37.037 1.90 0.00 37.03 3.06
3156 10615 8.435187 ACAAGATCCACTTATCATGTCATATGT 58.565 33.333 1.90 0.00 33.72 2.29
3157 10616 8.843885 ACAAGATCCACTTATCATGTCATATG 57.156 34.615 0.00 0.00 33.72 1.78
3161 10620 9.764363 GTATAACAAGATCCACTTATCATGTCA 57.236 33.333 0.00 0.00 36.94 3.58
3162 10621 9.988815 AGTATAACAAGATCCACTTATCATGTC 57.011 33.333 0.00 0.00 36.94 3.06
3239 10698 6.602009 AGAATATGTTTGTTAAGGTGCCCTAC 59.398 38.462 0.00 0.00 31.13 3.18
3308 10767 7.713750 AGCAATCATTGAAATCTGAACTATGG 58.286 34.615 0.00 0.00 0.00 2.74
3445 10904 9.835389 AAATACATTCCATACAAATCCAATTGG 57.165 29.630 19.08 19.08 34.56 3.16
3474 10933 5.880341 AGTTGTAGCAACTTCTTGTTTGTC 58.120 37.500 8.53 0.00 36.63 3.18
3483 10942 5.298347 AGTGGTCTAAGTTGTAGCAACTTC 58.702 41.667 24.65 14.25 40.58 3.01
3513 10972 6.430000 GGCTGATTAACTTGAAAGTAGACCAA 59.570 38.462 0.00 0.00 38.57 3.67
3533 10993 2.280119 GAGTGTGCGTGTGGCTGA 60.280 61.111 0.00 0.00 44.05 4.26
3568 11028 0.877071 GTTCGACGAGTCTGGGTGTA 59.123 55.000 0.00 0.00 0.00 2.90
3588 11048 1.277557 CTGCCCAGACATATAGGGAGC 59.722 57.143 0.00 0.00 45.80 4.70
3598 11058 2.993008 GAGCCATCTGCCCAGACA 59.007 61.111 0.00 0.00 42.71 3.41
3602 11062 1.971505 CTAACCGAGCCATCTGCCCA 61.972 60.000 0.00 0.00 42.71 5.36
3606 11066 2.748605 GATCACTAACCGAGCCATCTG 58.251 52.381 0.00 0.00 0.00 2.90
3607 11067 1.338337 CGATCACTAACCGAGCCATCT 59.662 52.381 0.00 0.00 0.00 2.90
3632 11092 2.704725 CCGACTGGGTCATGTTTTTG 57.295 50.000 0.00 0.00 32.09 2.44
3648 11108 1.671742 GCTGGTTTGAGACTCCCGA 59.328 57.895 0.00 0.00 0.00 5.14
3649 11109 1.376037 GGCTGGTTTGAGACTCCCG 60.376 63.158 0.00 0.00 0.00 5.14
3650 11110 0.329596 ATGGCTGGTTTGAGACTCCC 59.670 55.000 0.00 0.00 0.00 4.30
3651 11111 3.567478 ATATGGCTGGTTTGAGACTCC 57.433 47.619 0.00 0.00 0.00 3.85
3652 11112 5.615289 ACATATATGGCTGGTTTGAGACTC 58.385 41.667 16.96 0.00 0.00 3.36
3653 11113 5.636903 ACATATATGGCTGGTTTGAGACT 57.363 39.130 16.96 0.00 0.00 3.24
3654 11114 6.460123 CCAAACATATATGGCTGGTTTGAGAC 60.460 42.308 19.62 0.00 46.81 3.36
3655 11115 5.593909 CCAAACATATATGGCTGGTTTGAGA 59.406 40.000 19.62 0.00 46.81 3.27
3656 11116 5.221303 CCCAAACATATATGGCTGGTTTGAG 60.221 44.000 23.53 11.36 46.81 3.02
3657 11117 4.648762 CCCAAACATATATGGCTGGTTTGA 59.351 41.667 23.53 0.00 46.81 2.69
3658 11118 4.405358 ACCCAAACATATATGGCTGGTTTG 59.595 41.667 23.53 19.10 44.71 2.93
3659 11119 4.619679 ACCCAAACATATATGGCTGGTTT 58.380 39.130 23.53 11.45 35.28 3.27
3660 11120 4.264373 ACCCAAACATATATGGCTGGTT 57.736 40.909 23.53 13.78 35.28 3.67
3661 11121 3.960102 CAACCCAAACATATATGGCTGGT 59.040 43.478 23.53 17.59 35.28 4.00
3662 11122 4.037923 GTCAACCCAAACATATATGGCTGG 59.962 45.833 20.71 20.71 35.28 4.85
3663 11123 4.037923 GGTCAACCCAAACATATATGGCTG 59.962 45.833 16.96 12.26 35.28 4.85
3664 11124 4.215109 GGTCAACCCAAACATATATGGCT 58.785 43.478 16.96 0.92 35.28 4.75
3665 11125 3.004315 CGGTCAACCCAAACATATATGGC 59.996 47.826 16.96 0.00 35.28 4.40
3666 11126 3.568007 CCGGTCAACCCAAACATATATGG 59.432 47.826 16.96 0.32 36.42 2.74
3667 11127 3.004315 GCCGGTCAACCCAAACATATATG 59.996 47.826 11.29 11.29 0.00 1.78
3668 11128 3.219281 GCCGGTCAACCCAAACATATAT 58.781 45.455 1.90 0.00 0.00 0.86
3669 11129 2.026169 TGCCGGTCAACCCAAACATATA 60.026 45.455 1.90 0.00 0.00 0.86
3670 11130 1.272203 TGCCGGTCAACCCAAACATAT 60.272 47.619 1.90 0.00 0.00 1.78
3671 11131 0.110678 TGCCGGTCAACCCAAACATA 59.889 50.000 1.90 0.00 0.00 2.29
3672 11132 1.152652 TGCCGGTCAACCCAAACAT 60.153 52.632 1.90 0.00 0.00 2.71
3673 11133 2.122167 GTGCCGGTCAACCCAAACA 61.122 57.895 1.90 0.00 0.00 2.83
3674 11134 2.725641 GTGCCGGTCAACCCAAAC 59.274 61.111 1.90 0.00 0.00 2.93
3675 11135 2.519780 GGTGCCGGTCAACCCAAA 60.520 61.111 1.90 0.00 0.00 3.28
3680 11140 1.906105 TATGAGGGGTGCCGGTCAAC 61.906 60.000 1.90 4.06 0.00 3.18
3681 11141 0.986019 ATATGAGGGGTGCCGGTCAA 60.986 55.000 1.90 0.00 0.00 3.18
3682 11142 1.383943 ATATGAGGGGTGCCGGTCA 60.384 57.895 1.90 0.00 0.00 4.02
3683 11143 1.122019 AGATATGAGGGGTGCCGGTC 61.122 60.000 1.90 0.00 0.00 4.79
3684 11144 0.190069 TAGATATGAGGGGTGCCGGT 59.810 55.000 1.90 0.00 0.00 5.28
3685 11145 0.898320 CTAGATATGAGGGGTGCCGG 59.102 60.000 0.00 0.00 0.00 6.13
3686 11146 0.247736 GCTAGATATGAGGGGTGCCG 59.752 60.000 0.00 0.00 0.00 5.69
3687 11147 0.615850 GGCTAGATATGAGGGGTGCC 59.384 60.000 0.00 0.00 0.00 5.01
3688 11148 1.650528 AGGCTAGATATGAGGGGTGC 58.349 55.000 0.00 0.00 0.00 5.01
3689 11149 5.249393 ACATTTAGGCTAGATATGAGGGGTG 59.751 44.000 15.73 0.00 0.00 4.61
3690 11150 5.249393 CACATTTAGGCTAGATATGAGGGGT 59.751 44.000 15.73 0.17 0.00 4.95
3691 11151 5.249393 ACACATTTAGGCTAGATATGAGGGG 59.751 44.000 10.00 0.00 0.00 4.79
3692 11152 6.169094 CACACATTTAGGCTAGATATGAGGG 58.831 44.000 10.00 4.95 0.00 4.30
3693 11153 6.763355 ACACACATTTAGGCTAGATATGAGG 58.237 40.000 10.00 4.76 0.00 3.86
3694 11154 6.584184 CGACACACATTTAGGCTAGATATGAG 59.416 42.308 10.00 5.00 0.00 2.90
3695 11155 6.447162 CGACACACATTTAGGCTAGATATGA 58.553 40.000 10.00 0.00 0.00 2.15
3696 11156 5.635280 CCGACACACATTTAGGCTAGATATG 59.365 44.000 2.06 2.06 0.00 1.78
3697 11157 5.538813 TCCGACACACATTTAGGCTAGATAT 59.461 40.000 0.00 0.00 0.00 1.63
3698 11158 4.891168 TCCGACACACATTTAGGCTAGATA 59.109 41.667 0.00 0.00 0.00 1.98
3699 11159 3.704566 TCCGACACACATTTAGGCTAGAT 59.295 43.478 0.00 0.00 0.00 1.98
3700 11160 3.093814 TCCGACACACATTTAGGCTAGA 58.906 45.455 0.00 0.00 0.00 2.43
3701 11161 3.520290 TCCGACACACATTTAGGCTAG 57.480 47.619 0.00 0.00 0.00 3.42
3702 11162 5.303333 TCATATCCGACACACATTTAGGCTA 59.697 40.000 0.00 0.00 0.00 3.93
3703 11163 4.100963 TCATATCCGACACACATTTAGGCT 59.899 41.667 0.00 0.00 0.00 4.58
3704 11164 4.377021 TCATATCCGACACACATTTAGGC 58.623 43.478 0.00 0.00 0.00 3.93
3705 11165 4.991056 CCTCATATCCGACACACATTTAGG 59.009 45.833 0.00 0.00 0.00 2.69
3706 11166 5.842907 TCCTCATATCCGACACACATTTAG 58.157 41.667 0.00 0.00 0.00 1.85
3707 11167 5.596772 TCTCCTCATATCCGACACACATTTA 59.403 40.000 0.00 0.00 0.00 1.40
3708 11168 4.405680 TCTCCTCATATCCGACACACATTT 59.594 41.667 0.00 0.00 0.00 2.32
3709 11169 3.960755 TCTCCTCATATCCGACACACATT 59.039 43.478 0.00 0.00 0.00 2.71
3710 11170 3.566351 TCTCCTCATATCCGACACACAT 58.434 45.455 0.00 0.00 0.00 3.21
3711 11171 3.012934 TCTCCTCATATCCGACACACA 57.987 47.619 0.00 0.00 0.00 3.72
3712 11172 3.365465 CGATCTCCTCATATCCGACACAC 60.365 52.174 0.00 0.00 0.00 3.82
3713 11173 2.814336 CGATCTCCTCATATCCGACACA 59.186 50.000 0.00 0.00 0.00 3.72
3714 11174 2.162608 CCGATCTCCTCATATCCGACAC 59.837 54.545 0.00 0.00 0.00 3.67
3715 11175 2.437413 CCGATCTCCTCATATCCGACA 58.563 52.381 0.00 0.00 0.00 4.35
3716 11176 1.746220 CCCGATCTCCTCATATCCGAC 59.254 57.143 0.00 0.00 0.00 4.79
3717 11177 1.633945 TCCCGATCTCCTCATATCCGA 59.366 52.381 0.00 0.00 0.00 4.55
3718 11178 1.746220 GTCCCGATCTCCTCATATCCG 59.254 57.143 0.00 0.00 0.00 4.18
3719 11179 1.746220 CGTCCCGATCTCCTCATATCC 59.254 57.143 0.00 0.00 0.00 2.59
3720 11180 1.133407 GCGTCCCGATCTCCTCATATC 59.867 57.143 0.00 0.00 0.00 1.63
3721 11181 1.178276 GCGTCCCGATCTCCTCATAT 58.822 55.000 0.00 0.00 0.00 1.78
3722 11182 0.110678 AGCGTCCCGATCTCCTCATA 59.889 55.000 0.00 0.00 0.00 2.15
3723 11183 1.152652 AGCGTCCCGATCTCCTCAT 60.153 57.895 0.00 0.00 0.00 2.90
3724 11184 1.824329 GAGCGTCCCGATCTCCTCA 60.824 63.158 0.00 0.00 39.28 3.86
3725 11185 2.557372 GGAGCGTCCCGATCTCCTC 61.557 68.421 1.79 0.00 42.17 3.71
3726 11186 2.519780 GGAGCGTCCCGATCTCCT 60.520 66.667 1.79 0.00 42.17 3.69
3740 11200 0.389166 GTGACAGACTTGCTCGGGAG 60.389 60.000 0.00 0.00 0.00 4.30
3741 11201 1.666011 GTGACAGACTTGCTCGGGA 59.334 57.895 0.00 0.00 0.00 5.14
3742 11202 1.734477 CGTGACAGACTTGCTCGGG 60.734 63.158 0.00 0.00 0.00 5.14
3743 11203 0.240145 TACGTGACAGACTTGCTCGG 59.760 55.000 0.00 0.00 0.00 4.63
3744 11204 1.607713 CTACGTGACAGACTTGCTCG 58.392 55.000 0.00 0.00 0.00 5.03
3745 11205 1.540267 TCCTACGTGACAGACTTGCTC 59.460 52.381 0.00 0.00 0.00 4.26
3746 11206 1.617322 TCCTACGTGACAGACTTGCT 58.383 50.000 0.00 0.00 0.00 3.91
3747 11207 2.164624 AGATCCTACGTGACAGACTTGC 59.835 50.000 0.00 0.00 0.00 4.01
3748 11208 3.191581 ACAGATCCTACGTGACAGACTTG 59.808 47.826 0.00 0.00 0.00 3.16
3749 11209 3.422796 ACAGATCCTACGTGACAGACTT 58.577 45.455 0.00 0.00 0.00 3.01
3750 11210 3.074675 ACAGATCCTACGTGACAGACT 57.925 47.619 0.00 0.00 0.00 3.24
3751 11211 3.427773 GGAACAGATCCTACGTGACAGAC 60.428 52.174 0.00 0.00 45.56 3.51
3752 11212 2.753452 GGAACAGATCCTACGTGACAGA 59.247 50.000 0.00 0.00 45.56 3.41
3753 11213 3.152261 GGAACAGATCCTACGTGACAG 57.848 52.381 0.00 0.00 45.56 3.51
3764 11224 3.195698 GGCGGCGTGGAACAGATC 61.196 66.667 9.37 0.00 41.80 2.75
3765 11225 4.778143 GGGCGGCGTGGAACAGAT 62.778 66.667 9.37 0.00 41.80 2.90
3780 11240 0.471971 ATATCTGGGGTCGAGTGGGG 60.472 60.000 0.00 0.00 0.00 4.96
3781 11241 2.304221 TATATCTGGGGTCGAGTGGG 57.696 55.000 0.00 0.00 0.00 4.61
3782 11242 3.119459 CGAATATATCTGGGGTCGAGTGG 60.119 52.174 0.00 0.00 0.00 4.00
3783 11243 3.506455 ACGAATATATCTGGGGTCGAGTG 59.494 47.826 8.76 0.00 32.98 3.51
3784 11244 3.757493 GACGAATATATCTGGGGTCGAGT 59.243 47.826 8.76 0.00 32.98 4.18
3785 11245 3.756963 TGACGAATATATCTGGGGTCGAG 59.243 47.826 8.76 0.00 32.98 4.04
3786 11246 3.504906 GTGACGAATATATCTGGGGTCGA 59.495 47.826 8.76 0.00 32.98 4.20
3787 11247 3.367087 GGTGACGAATATATCTGGGGTCG 60.367 52.174 0.00 1.64 34.77 4.79
3788 11248 3.576982 TGGTGACGAATATATCTGGGGTC 59.423 47.826 0.00 0.00 0.00 4.46
3789 11249 3.583228 TGGTGACGAATATATCTGGGGT 58.417 45.455 0.00 0.00 0.00 4.95
3790 11250 4.383118 GGATGGTGACGAATATATCTGGGG 60.383 50.000 0.00 0.00 0.00 4.96
3791 11251 4.678044 CGGATGGTGACGAATATATCTGGG 60.678 50.000 0.00 0.00 0.00 4.45
3792 11252 4.424626 CGGATGGTGACGAATATATCTGG 58.575 47.826 0.00 0.00 0.00 3.86
3793 11253 3.859961 GCGGATGGTGACGAATATATCTG 59.140 47.826 0.00 0.00 0.00 2.90
3794 11254 3.509967 TGCGGATGGTGACGAATATATCT 59.490 43.478 0.00 0.00 0.00 1.98
3795 11255 3.845178 TGCGGATGGTGACGAATATATC 58.155 45.455 0.00 0.00 0.00 1.63
3796 11256 3.953712 TGCGGATGGTGACGAATATAT 57.046 42.857 0.00 0.00 0.00 0.86
3797 11257 3.368013 GGATGCGGATGGTGACGAATATA 60.368 47.826 0.00 0.00 0.00 0.86
3798 11258 2.612972 GGATGCGGATGGTGACGAATAT 60.613 50.000 0.00 0.00 0.00 1.28
3799 11259 1.270094 GGATGCGGATGGTGACGAATA 60.270 52.381 0.00 0.00 0.00 1.75
3800 11260 0.532862 GGATGCGGATGGTGACGAAT 60.533 55.000 0.00 0.00 0.00 3.34
3801 11261 1.153449 GGATGCGGATGGTGACGAA 60.153 57.895 0.00 0.00 0.00 3.85
3802 11262 2.499205 GGATGCGGATGGTGACGA 59.501 61.111 0.00 0.00 0.00 4.20
3803 11263 2.588877 GGGATGCGGATGGTGACG 60.589 66.667 0.00 0.00 0.00 4.35
3804 11264 2.588877 CGGGATGCGGATGGTGAC 60.589 66.667 0.00 0.00 0.00 3.67
3805 11265 3.860605 CCGGGATGCGGATGGTGA 61.861 66.667 0.00 0.00 0.00 4.02
3822 11282 4.621087 AGTGGCTGGGGTTTGGGC 62.621 66.667 0.00 0.00 0.00 5.36
3823 11283 2.283173 GAGTGGCTGGGGTTTGGG 60.283 66.667 0.00 0.00 0.00 4.12
3824 11284 2.283173 GGAGTGGCTGGGGTTTGG 60.283 66.667 0.00 0.00 0.00 3.28
3825 11285 1.903404 GTGGAGTGGCTGGGGTTTG 60.903 63.158 0.00 0.00 0.00 2.93
3826 11286 2.069165 GAGTGGAGTGGCTGGGGTTT 62.069 60.000 0.00 0.00 0.00 3.27
3827 11287 2.450502 AGTGGAGTGGCTGGGGTT 60.451 61.111 0.00 0.00 0.00 4.11
3828 11288 2.930562 GAGTGGAGTGGCTGGGGT 60.931 66.667 0.00 0.00 0.00 4.95
3829 11289 3.721706 GGAGTGGAGTGGCTGGGG 61.722 72.222 0.00 0.00 0.00 4.96
3830 11290 2.930019 TGGAGTGGAGTGGCTGGG 60.930 66.667 0.00 0.00 0.00 4.45
3831 11291 2.348998 GTGGAGTGGAGTGGCTGG 59.651 66.667 0.00 0.00 0.00 4.85
3832 11292 2.348998 GGTGGAGTGGAGTGGCTG 59.651 66.667 0.00 0.00 0.00 4.85
3833 11293 2.930562 GGGTGGAGTGGAGTGGCT 60.931 66.667 0.00 0.00 0.00 4.75
3834 11294 4.035102 GGGGTGGAGTGGAGTGGC 62.035 72.222 0.00 0.00 0.00 5.01
3835 11295 2.529136 TGGGGTGGAGTGGAGTGG 60.529 66.667 0.00 0.00 0.00 4.00
3836 11296 2.750350 GTGGGGTGGAGTGGAGTG 59.250 66.667 0.00 0.00 0.00 3.51
3837 11297 2.529389 GGTGGGGTGGAGTGGAGT 60.529 66.667 0.00 0.00 0.00 3.85
3838 11298 3.330720 GGGTGGGGTGGAGTGGAG 61.331 72.222 0.00 0.00 0.00 3.86
3839 11299 4.995058 GGGGTGGGGTGGAGTGGA 62.995 72.222 0.00 0.00 0.00 4.02
3842 11302 4.542627 TTGGGGGTGGGGTGGAGT 62.543 66.667 0.00 0.00 0.00 3.85
3843 11303 3.661648 CTTGGGGGTGGGGTGGAG 61.662 72.222 0.00 0.00 0.00 3.86
3846 11306 4.366684 GAGCTTGGGGGTGGGGTG 62.367 72.222 0.00 0.00 0.00 4.61
3849 11309 2.460476 AAATGGAGCTTGGGGGTGGG 62.460 60.000 0.00 0.00 0.00 4.61
3850 11310 0.972471 GAAATGGAGCTTGGGGGTGG 60.972 60.000 0.00 0.00 0.00 4.61
3851 11311 0.251742 TGAAATGGAGCTTGGGGGTG 60.252 55.000 0.00 0.00 0.00 4.61
3852 11312 0.486879 TTGAAATGGAGCTTGGGGGT 59.513 50.000 0.00 0.00 0.00 4.95
3853 11313 0.897621 GTTGAAATGGAGCTTGGGGG 59.102 55.000 0.00 0.00 0.00 5.40
3854 11314 0.527565 CGTTGAAATGGAGCTTGGGG 59.472 55.000 0.00 0.00 0.00 4.96
3855 11315 1.533625 TCGTTGAAATGGAGCTTGGG 58.466 50.000 0.00 0.00 0.00 4.12
3856 11316 3.012518 AGATCGTTGAAATGGAGCTTGG 58.987 45.455 0.00 0.00 0.00 3.61
3857 11317 3.064545 GGAGATCGTTGAAATGGAGCTTG 59.935 47.826 0.00 0.00 0.00 4.01
3858 11318 3.274288 GGAGATCGTTGAAATGGAGCTT 58.726 45.455 0.00 0.00 0.00 3.74
3859 11319 2.739932 CGGAGATCGTTGAAATGGAGCT 60.740 50.000 0.00 0.00 0.00 4.09
3860 11320 1.594862 CGGAGATCGTTGAAATGGAGC 59.405 52.381 0.00 0.00 0.00 4.70
3861 11321 2.860735 GTCGGAGATCGTTGAAATGGAG 59.139 50.000 0.00 0.00 40.67 3.86
3862 11322 2.232696 TGTCGGAGATCGTTGAAATGGA 59.767 45.455 0.00 0.00 40.67 3.41
3863 11323 2.616960 TGTCGGAGATCGTTGAAATGG 58.383 47.619 0.00 0.00 40.67 3.16
3864 11324 3.618594 ACATGTCGGAGATCGTTGAAATG 59.381 43.478 10.77 10.77 40.67 2.32
3865 11325 3.861840 ACATGTCGGAGATCGTTGAAAT 58.138 40.909 0.00 0.00 40.67 2.17
3866 11326 3.313012 ACATGTCGGAGATCGTTGAAA 57.687 42.857 0.00 0.00 40.67 2.69
3867 11327 3.313012 AACATGTCGGAGATCGTTGAA 57.687 42.857 0.00 0.00 40.67 2.69
3868 11328 3.181490 CCTAACATGTCGGAGATCGTTGA 60.181 47.826 0.00 0.00 40.67 3.18
3869 11329 3.116300 CCTAACATGTCGGAGATCGTTG 58.884 50.000 0.00 0.00 40.67 4.10
3870 11330 2.481449 GCCTAACATGTCGGAGATCGTT 60.481 50.000 16.08 7.63 40.67 3.85
3871 11331 1.067212 GCCTAACATGTCGGAGATCGT 59.933 52.381 16.08 0.00 40.67 3.73
3872 11332 1.067060 TGCCTAACATGTCGGAGATCG 59.933 52.381 16.08 0.00 40.67 3.69
3873 11333 2.748605 CTGCCTAACATGTCGGAGATC 58.251 52.381 16.08 1.72 40.67 2.75
3874 11334 1.202580 GCTGCCTAACATGTCGGAGAT 60.203 52.381 16.08 0.00 40.67 2.75
3875 11335 0.175760 GCTGCCTAACATGTCGGAGA 59.824 55.000 16.08 3.22 0.00 3.71
3876 11336 1.148157 CGCTGCCTAACATGTCGGAG 61.148 60.000 16.08 10.48 0.00 4.63
3877 11337 1.153647 CGCTGCCTAACATGTCGGA 60.154 57.895 16.08 0.76 0.00 4.55
3878 11338 2.173669 CCGCTGCCTAACATGTCGG 61.174 63.158 0.00 1.60 0.00 4.79
3879 11339 0.530650 ATCCGCTGCCTAACATGTCG 60.531 55.000 0.00 0.00 0.00 4.35
3880 11340 1.221414 GATCCGCTGCCTAACATGTC 58.779 55.000 0.00 0.00 0.00 3.06
3881 11341 0.179045 GGATCCGCTGCCTAACATGT 60.179 55.000 0.00 0.00 0.00 3.21
3882 11342 1.224069 CGGATCCGCTGCCTAACATG 61.224 60.000 23.37 0.00 0.00 3.21
3883 11343 1.069765 CGGATCCGCTGCCTAACAT 59.930 57.895 23.37 0.00 0.00 2.71
3884 11344 2.055633 TCGGATCCGCTGCCTAACA 61.056 57.895 29.62 5.72 39.59 2.41
3885 11345 1.591863 GTCGGATCCGCTGCCTAAC 60.592 63.158 29.62 16.23 39.59 2.34
3886 11346 1.735376 GAGTCGGATCCGCTGCCTAA 61.735 60.000 29.62 7.37 39.59 2.69
3887 11347 2.123854 AGTCGGATCCGCTGCCTA 60.124 61.111 29.62 8.20 39.59 3.93
3888 11348 3.532155 GAGTCGGATCCGCTGCCT 61.532 66.667 29.62 20.10 39.59 4.75
3889 11349 4.593864 GGAGTCGGATCCGCTGCC 62.594 72.222 29.62 23.23 39.59 4.85
3895 11355 1.161843 GAGATCTCGGAGTCGGATCC 58.838 60.000 7.04 0.00 40.55 3.36
3896 11356 1.161843 GGAGATCTCGGAGTCGGATC 58.838 60.000 16.46 6.15 40.28 3.36
3897 11357 0.768622 AGGAGATCTCGGAGTCGGAT 59.231 55.000 16.46 0.00 36.95 4.18
3898 11358 0.179043 CAGGAGATCTCGGAGTCGGA 60.179 60.000 16.46 0.00 36.95 4.55
3899 11359 0.179043 TCAGGAGATCTCGGAGTCGG 60.179 60.000 16.46 3.47 36.95 4.79
3900 11360 1.890876 ATCAGGAGATCTCGGAGTCG 58.109 55.000 16.46 1.61 37.82 4.18
3901 11361 4.394729 ACTAATCAGGAGATCTCGGAGTC 58.605 47.826 16.46 2.31 31.90 3.36
3902 11362 4.394729 GACTAATCAGGAGATCTCGGAGT 58.605 47.826 16.46 16.59 31.90 3.85
3903 11363 3.435327 CGACTAATCAGGAGATCTCGGAG 59.565 52.174 16.46 8.74 31.90 4.63
3904 11364 3.071167 TCGACTAATCAGGAGATCTCGGA 59.929 47.826 16.46 15.93 31.90 4.55
3905 11365 3.187637 GTCGACTAATCAGGAGATCTCGG 59.812 52.174 16.46 11.18 31.90 4.63
3906 11366 4.062293 AGTCGACTAATCAGGAGATCTCG 58.938 47.826 18.46 4.01 31.90 4.04
3907 11367 4.215399 CCAGTCGACTAATCAGGAGATCTC 59.785 50.000 19.57 14.75 31.90 2.75
3908 11368 4.141287 CCAGTCGACTAATCAGGAGATCT 58.859 47.826 19.57 0.00 31.90 2.75
3909 11369 3.254657 CCCAGTCGACTAATCAGGAGATC 59.745 52.174 19.57 0.00 31.90 2.75
3910 11370 3.226777 CCCAGTCGACTAATCAGGAGAT 58.773 50.000 19.57 0.00 35.53 2.75
3911 11371 2.656002 CCCAGTCGACTAATCAGGAGA 58.344 52.381 19.57 0.00 0.00 3.71
3912 11372 1.683917 CCCCAGTCGACTAATCAGGAG 59.316 57.143 19.57 1.44 0.00 3.69
3913 11373 1.776662 CCCCAGTCGACTAATCAGGA 58.223 55.000 19.57 0.00 0.00 3.86
3914 11374 0.105039 GCCCCAGTCGACTAATCAGG 59.895 60.000 19.57 14.64 0.00 3.86
3915 11375 0.824109 TGCCCCAGTCGACTAATCAG 59.176 55.000 19.57 5.22 0.00 2.90
3916 11376 1.412710 GATGCCCCAGTCGACTAATCA 59.587 52.381 19.57 13.76 0.00 2.57
3917 11377 1.603172 CGATGCCCCAGTCGACTAATC 60.603 57.143 19.57 14.27 40.11 1.75
3918 11378 0.389391 CGATGCCCCAGTCGACTAAT 59.611 55.000 19.57 7.14 40.11 1.73
3919 11379 0.968901 ACGATGCCCCAGTCGACTAA 60.969 55.000 19.57 2.13 40.11 2.24
3920 11380 1.379443 ACGATGCCCCAGTCGACTA 60.379 57.895 19.57 1.92 40.11 2.59
3921 11381 2.680352 ACGATGCCCCAGTCGACT 60.680 61.111 13.58 13.58 40.11 4.18
3922 11382 2.202756 GACGATGCCCCAGTCGAC 60.203 66.667 7.70 7.70 40.11 4.20
3923 11383 3.458163 GGACGATGCCCCAGTCGA 61.458 66.667 1.49 0.00 40.11 4.20
3924 11384 4.530857 GGGACGATGCCCCAGTCG 62.531 72.222 0.00 0.00 42.62 4.18
3940 11400 2.735772 CCTCCTCGTCCCCACATGG 61.736 68.421 0.00 0.00 0.00 3.66
3941 11401 2.903357 CCTCCTCGTCCCCACATG 59.097 66.667 0.00 0.00 0.00 3.21
3942 11402 3.083997 GCCTCCTCGTCCCCACAT 61.084 66.667 0.00 0.00 0.00 3.21
3945 11405 4.458829 ATCGCCTCCTCGTCCCCA 62.459 66.667 0.00 0.00 0.00 4.96
3946 11406 3.917760 CATCGCCTCCTCGTCCCC 61.918 72.222 0.00 0.00 0.00 4.81
3947 11407 3.917760 CCATCGCCTCCTCGTCCC 61.918 72.222 0.00 0.00 0.00 4.46
3948 11408 3.140225 GACCATCGCCTCCTCGTCC 62.140 68.421 0.00 0.00 0.00 4.79
3949 11409 2.413765 GACCATCGCCTCCTCGTC 59.586 66.667 0.00 0.00 0.00 4.20
3950 11410 3.518998 CGACCATCGCCTCCTCGT 61.519 66.667 0.00 0.00 31.14 4.18
3951 11411 2.938539 GAACGACCATCGCCTCCTCG 62.939 65.000 0.00 0.00 45.12 4.63
3952 11412 1.227002 GAACGACCATCGCCTCCTC 60.227 63.158 0.00 0.00 45.12 3.71
3953 11413 2.893398 GAACGACCATCGCCTCCT 59.107 61.111 0.00 0.00 45.12 3.69
3954 11414 2.582498 CGAACGACCATCGCCTCC 60.582 66.667 0.00 0.00 45.12 4.30
3959 11419 3.005898 CCATGCGAACGACCATCG 58.994 61.111 0.00 0.00 46.93 3.84
3960 11420 2.709475 GCCATGCGAACGACCATC 59.291 61.111 0.00 0.00 0.00 3.51
3961 11421 2.824041 GGCCATGCGAACGACCAT 60.824 61.111 0.00 0.00 0.00 3.55
3963 11423 4.778143 AGGGCCATGCGAACGACC 62.778 66.667 6.18 0.00 0.00 4.79
3964 11424 3.195698 GAGGGCCATGCGAACGAC 61.196 66.667 6.18 0.00 0.00 4.34
3965 11425 4.467084 GGAGGGCCATGCGAACGA 62.467 66.667 6.18 0.00 0.00 3.85
4002 11462 1.195115 TCTCTAATTGTGAGCGGGCT 58.805 50.000 0.00 0.00 0.00 5.19
4009 11469 4.101585 AGCGGGATCAATCTCTAATTGTGA 59.898 41.667 0.00 0.00 0.00 3.58
4011 11471 4.384056 CAGCGGGATCAATCTCTAATTGT 58.616 43.478 0.00 0.00 0.00 2.71
4012 11472 3.750130 CCAGCGGGATCAATCTCTAATTG 59.250 47.826 0.00 0.00 35.59 2.32
4014 11474 3.242867 TCCAGCGGGATCAATCTCTAAT 58.757 45.455 0.00 0.00 38.64 1.73
4027 11487 1.753848 TGCAATGGATTCCAGCGGG 60.754 57.895 11.78 0.00 36.75 6.13
4029 11489 1.434696 GGTGCAATGGATTCCAGCG 59.565 57.895 11.78 5.71 36.75 5.18
4046 11506 2.491152 AGCGCCATTTTGCATCGG 59.509 55.556 2.29 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.