Multiple sequence alignment - TraesCS6D01G119200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G119200 chr6D 100.000 3392 0 0 1 3392 84279014 84282405 0.000000e+00 6264.0
1 TraesCS6D01G119200 chr6D 86.473 207 21 5 435 639 429498290 429498491 1.580000e-53 220.0
2 TraesCS6D01G119200 chr6D 88.073 109 13 0 1050 1158 84280009 84280117 2.750000e-26 130.0
3 TraesCS6D01G119200 chr6D 88.073 109 13 0 996 1104 84280063 84280171 2.750000e-26 130.0
4 TraesCS6D01G119200 chr7D 92.693 1218 86 1 1051 2265 109144777 109143560 0.000000e+00 1753.0
5 TraesCS6D01G119200 chr7D 89.970 658 39 12 2264 2907 109143520 109142876 0.000000e+00 824.0
6 TraesCS6D01G119200 chr7D 90.736 421 32 5 322 740 109145658 109145243 3.820000e-154 555.0
7 TraesCS6D01G119200 chr7D 88.108 370 35 3 736 1104 109145031 109144670 6.720000e-117 431.0
8 TraesCS6D01G119200 chr7D 82.526 475 61 6 2267 2739 10973033 10972579 6.820000e-107 398.0
9 TraesCS6D01G119200 chr7D 86.780 295 35 3 770 1063 9354560 9354851 3.260000e-85 326.0
10 TraesCS6D01G119200 chr7D 82.514 366 56 6 1139 1500 8870162 8870523 7.070000e-82 315.0
11 TraesCS6D01G119200 chr7D 94.667 75 2 1 2910 2982 109142844 109142770 7.690000e-22 115.0
12 TraesCS6D01G119200 chr7D 96.364 55 2 0 996 1050 109144724 109144670 1.300000e-14 91.6
13 TraesCS6D01G119200 chr7B 92.131 1220 91 4 1051 2266 68223707 68222489 0.000000e+00 1716.0
14 TraesCS6D01G119200 chr7B 91.557 1220 98 4 1051 2266 68160758 68159540 0.000000e+00 1677.0
15 TraesCS6D01G119200 chr7B 85.808 761 63 19 2264 2993 68159501 68158755 0.000000e+00 765.0
16 TraesCS6D01G119200 chr7B 88.942 633 47 13 2264 2887 68222450 68221832 0.000000e+00 760.0
17 TraesCS6D01G119200 chr7B 83.767 807 74 22 323 1104 68224374 68223600 0.000000e+00 712.0
18 TraesCS6D01G119200 chr7B 81.519 698 69 17 431 1104 68161312 68160651 1.400000e-143 520.0
19 TraesCS6D01G119200 chr7B 93.860 114 6 1 323 435 68164202 68164089 1.620000e-38 171.0
20 TraesCS6D01G119200 chr7B 95.122 41 2 0 2910 2950 68221789 68221749 7.860000e-07 65.8
21 TraesCS6D01G119200 chr7A 90.566 1219 103 3 1051 2266 114414450 114413241 0.000000e+00 1604.0
22 TraesCS6D01G119200 chr7A 89.396 1226 111 4 1051 2266 114688818 114687602 0.000000e+00 1526.0
23 TraesCS6D01G119200 chr7A 82.027 1174 169 16 1120 2266 10169953 10168795 0.000000e+00 961.0
24 TraesCS6D01G119200 chr7A 79.453 1207 174 46 1106 2265 9486675 9487854 0.000000e+00 787.0
25 TraesCS6D01G119200 chr7A 84.975 812 75 17 321 1104 114689512 114688720 0.000000e+00 780.0
26 TraesCS6D01G119200 chr7A 84.963 818 68 19 321 1104 114415148 114414352 0.000000e+00 778.0
27 TraesCS6D01G119200 chr7A 78.522 1164 192 32 1114 2266 10157669 10156553 0.000000e+00 712.0
28 TraesCS6D01G119200 chr7A 89.070 430 34 5 2264 2686 114413202 114412779 3.880000e-144 521.0
29 TraesCS6D01G119200 chr7A 89.044 429 32 8 2264 2684 114687563 114687142 5.020000e-143 518.0
30 TraesCS6D01G119200 chr7A 78.966 561 87 25 2276 2824 10167811 10167270 1.500000e-93 353.0
31 TraesCS6D01G119200 chr7A 83.990 381 47 11 2364 2740 10168670 10168300 1.500000e-93 353.0
32 TraesCS6D01G119200 chr7A 81.174 409 61 5 1104 1512 1526782 1526390 7.070000e-82 315.0
33 TraesCS6D01G119200 chr7A 87.747 253 19 4 2641 2887 114687140 114686894 5.540000e-73 285.0
34 TraesCS6D01G119200 chr7A 91.667 72 3 1 2910 2978 114412469 114412398 2.790000e-16 97.1
35 TraesCS6D01G119200 chr7A 89.474 76 5 1 2910 2982 114686847 114686772 3.600000e-15 93.5
36 TraesCS6D01G119200 chr7A 93.220 59 3 1 993 1050 1526786 1526728 6.030000e-13 86.1
37 TraesCS6D01G119200 chr4A 82.437 1190 155 29 1104 2266 728353080 728351918 0.000000e+00 990.0
38 TraesCS6D01G119200 chr4A 79.933 1186 172 38 1120 2264 729426121 729424961 0.000000e+00 811.0
39 TraesCS6D01G119200 chr4A 78.316 1176 215 25 1104 2263 728587145 728588296 0.000000e+00 723.0
40 TraesCS6D01G119200 chr4A 95.938 320 10 2 3074 3392 585993930 585994247 1.800000e-142 516.0
41 TraesCS6D01G119200 chr4A 80.817 563 90 12 2264 2824 728357190 728356644 3.130000e-115 425.0
42 TraesCS6D01G119200 chr4A 80.879 387 54 11 1135 1511 743634605 743634981 1.540000e-73 287.0
43 TraesCS6D01G119200 chr4A 82.474 97 15 2 2267 2363 730003244 730003150 2.170000e-12 84.2
44 TraesCS6D01G119200 chr1B 82.641 674 84 18 1 670 41851453 41852097 1.770000e-157 566.0
45 TraesCS6D01G119200 chr4D 96.250 320 9 2 3074 3392 69952824 69952507 3.880000e-144 521.0
46 TraesCS6D01G119200 chr4D 96.250 320 9 2 3074 3392 265402283 265402600 3.880000e-144 521.0
47 TraesCS6D01G119200 chr4D 95.925 319 11 1 3074 3392 240899293 240899609 1.800000e-142 516.0
48 TraesCS6D01G119200 chr4D 95.938 320 10 2 3074 3392 265382244 265382561 1.800000e-142 516.0
49 TraesCS6D01G119200 chr2A 95.938 320 10 2 3074 3392 196042230 196042547 1.800000e-142 516.0
50 TraesCS6D01G119200 chr3D 95.625 320 11 2 3074 3392 479474269 479474586 8.400000e-141 510.0
51 TraesCS6D01G119200 chr3D 95.625 320 11 2 3074 3392 556691937 556691620 8.400000e-141 510.0
52 TraesCS6D01G119200 chr1D 95.625 320 11 2 3074 3392 226207119 226207436 8.400000e-141 510.0
53 TraesCS6D01G119200 chr1D 77.778 279 41 9 407 670 480677337 480677609 5.860000e-33 152.0
54 TraesCS6D01G119200 chr2B 84.298 121 16 3 551 671 407216308 407216191 7.690000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G119200 chr6D 84279014 84282405 3391 False 2174.666667 6264 92.048667 1 3392 3 chr6D.!!$F2 3391
1 TraesCS6D01G119200 chr7D 109142770 109145658 2888 True 628.266667 1753 92.089667 322 2982 6 chr7D.!!$R2 2660
2 TraesCS6D01G119200 chr7B 68221749 68224374 2625 True 813.450000 1716 89.990500 323 2950 4 chr7B.!!$R2 2627
3 TraesCS6D01G119200 chr7B 68158755 68164202 5447 True 783.250000 1677 88.186000 323 2993 4 chr7B.!!$R1 2670
4 TraesCS6D01G119200 chr7A 9486675 9487854 1179 False 787.000000 787 79.453000 1106 2265 1 chr7A.!!$F1 1159
5 TraesCS6D01G119200 chr7A 114412398 114415148 2750 True 750.025000 1604 89.066500 321 2978 4 chr7A.!!$R4 2657
6 TraesCS6D01G119200 chr7A 10156553 10157669 1116 True 712.000000 712 78.522000 1114 2266 1 chr7A.!!$R1 1152
7 TraesCS6D01G119200 chr7A 114686772 114689512 2740 True 640.500000 1526 88.127200 321 2982 5 chr7A.!!$R5 2661
8 TraesCS6D01G119200 chr7A 10167270 10169953 2683 True 555.666667 961 81.661000 1120 2824 3 chr7A.!!$R3 1704
9 TraesCS6D01G119200 chr4A 729424961 729426121 1160 True 811.000000 811 79.933000 1120 2264 1 chr4A.!!$R1 1144
10 TraesCS6D01G119200 chr4A 728587145 728588296 1151 False 723.000000 723 78.316000 1104 2263 1 chr4A.!!$F2 1159
11 TraesCS6D01G119200 chr4A 728351918 728357190 5272 True 707.500000 990 81.627000 1104 2824 2 chr4A.!!$R3 1720
12 TraesCS6D01G119200 chr1B 41851453 41852097 644 False 566.000000 566 82.641000 1 670 1 chr1B.!!$F1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 3875 0.111001 CGCTGTCGTAAACCAAACCG 60.111 55.0 0.0 0.0 0.0 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2836 6968 0.538118 ATGGACCAAACATGCATGCC 59.462 50.0 26.53 17.79 0.0 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.174413 TCCATCTGATTCATGGTTGTCTTAAA 58.826 34.615 6.26 0.00 41.59 1.52
73 75 9.727859 TTATTTCAGGTACACATAAAAGCTACA 57.272 29.630 0.00 0.00 0.00 2.74
124 127 7.782897 TTCTCCAATCGATAGGATGATTACT 57.217 36.000 0.00 0.00 34.93 2.24
134 137 6.422100 CGATAGGATGATTACTTGTGAGGTTG 59.578 42.308 0.00 0.00 0.00 3.77
135 138 4.848357 AGGATGATTACTTGTGAGGTTGG 58.152 43.478 0.00 0.00 0.00 3.77
136 139 4.289672 AGGATGATTACTTGTGAGGTTGGT 59.710 41.667 0.00 0.00 0.00 3.67
137 140 5.010282 GGATGATTACTTGTGAGGTTGGTT 58.990 41.667 0.00 0.00 0.00 3.67
138 141 6.012858 AGGATGATTACTTGTGAGGTTGGTTA 60.013 38.462 0.00 0.00 0.00 2.85
139 142 6.657541 GGATGATTACTTGTGAGGTTGGTTAA 59.342 38.462 0.00 0.00 0.00 2.01
142 145 8.294954 TGATTACTTGTGAGGTTGGTTAAAAA 57.705 30.769 0.00 0.00 0.00 1.94
144 147 7.706100 TTACTTGTGAGGTTGGTTAAAAAGT 57.294 32.000 0.00 0.00 0.00 2.66
145 148 6.599356 ACTTGTGAGGTTGGTTAAAAAGTT 57.401 33.333 0.00 0.00 0.00 2.66
146 149 7.706100 ACTTGTGAGGTTGGTTAAAAAGTTA 57.294 32.000 0.00 0.00 0.00 2.24
147 150 8.301252 ACTTGTGAGGTTGGTTAAAAAGTTAT 57.699 30.769 0.00 0.00 0.00 1.89
148 151 9.411189 ACTTGTGAGGTTGGTTAAAAAGTTATA 57.589 29.630 0.00 0.00 0.00 0.98
176 179 3.281727 TGTCTTACCCATGCATTCCTC 57.718 47.619 0.00 0.00 0.00 3.71
178 181 3.209410 GTCTTACCCATGCATTCCTCTG 58.791 50.000 0.00 0.00 0.00 3.35
181 184 2.134789 ACCCATGCATTCCTCTGAAC 57.865 50.000 0.00 0.00 32.13 3.18
189 192 4.072131 TGCATTCCTCTGAACCTTACAAC 58.928 43.478 0.00 0.00 32.13 3.32
195 198 3.815401 CCTCTGAACCTTACAACAACCAG 59.185 47.826 0.00 0.00 0.00 4.00
201 204 3.970842 ACCTTACAACAACCAGGTTTCA 58.029 40.909 0.44 0.00 36.09 2.69
212 215 1.068333 CCAGGTTTCACAATGAAGGCG 60.068 52.381 0.00 0.00 37.70 5.52
294 297 8.726988 TGGTTATGTATTTTGCTACTTCAACTC 58.273 33.333 0.00 0.00 0.00 3.01
300 303 8.988934 TGTATTTTGCTACTTCAACTCTGTTAG 58.011 33.333 0.00 0.00 0.00 2.34
301 304 6.861065 TTTTGCTACTTCAACTCTGTTAGG 57.139 37.500 0.00 0.00 0.00 2.69
304 307 4.202315 TGCTACTTCAACTCTGTTAGGCAA 60.202 41.667 0.00 0.00 0.00 4.52
309 312 9.817809 CTACTTCAACTCTGTTAGGCAATTATA 57.182 33.333 0.00 0.00 0.00 0.98
336 339 9.025041 CCATACTTGATGAGTACCATATGTCTA 57.975 37.037 1.24 0.00 43.38 2.59
445 3232 8.239038 TCTCTAAGTGAATAGGAGTTACATGG 57.761 38.462 0.00 0.00 0.00 3.66
502 3289 2.037847 GGGAGGCCCAAATGCAGT 59.962 61.111 0.00 0.00 44.65 4.40
534 3321 1.276622 GGGAGGCAAGTGAGAAGGTA 58.723 55.000 0.00 0.00 0.00 3.08
537 3324 1.276421 GAGGCAAGTGAGAAGGTAGCA 59.724 52.381 0.00 0.00 0.00 3.49
684 3474 5.473504 TCCTTCTAGTCATGTTTGGAAAAGC 59.526 40.000 0.00 0.00 0.00 3.51
759 3767 5.632427 GCATCCCCATTTCCTCTTTCTAAGA 60.632 44.000 0.00 0.00 35.87 2.10
764 3772 7.406151 TCCCCATTTCCTCTTTCTAAGATTAGT 59.594 37.037 0.00 0.00 36.82 2.24
800 3812 1.551099 CCCCACTGTCCTCTGAGAAGA 60.551 57.143 6.17 0.00 0.00 2.87
809 3821 1.898472 CCTCTGAGAAGAGAAGTGCCA 59.102 52.381 6.17 0.00 38.13 4.92
861 3875 0.111001 CGCTGTCGTAAACCAAACCG 60.111 55.000 0.00 0.00 0.00 4.44
885 3899 1.057851 ACCTTTCCGACTCCCCACAA 61.058 55.000 0.00 0.00 0.00 3.33
900 3914 1.101049 CACAAGACCACCACCACCAC 61.101 60.000 0.00 0.00 0.00 4.16
901 3915 1.528309 CAAGACCACCACCACCACC 60.528 63.158 0.00 0.00 0.00 4.61
920 3934 3.081710 CCACCGGGTTAATTTTCCTCT 57.918 47.619 6.32 0.00 0.00 3.69
945 3959 4.594062 CCAGATCCATGATTTCCTCTCTCT 59.406 45.833 0.00 0.00 0.00 3.10
967 3981 0.615331 TTGCAGATCTGACCTGACCC 59.385 55.000 27.04 6.34 33.65 4.46
991 4005 1.383803 CCTGCCTAGCCCTTCCTCT 60.384 63.158 0.00 0.00 0.00 3.69
992 4006 0.985490 CCTGCCTAGCCCTTCCTCTT 60.985 60.000 0.00 0.00 0.00 2.85
993 4007 0.915364 CTGCCTAGCCCTTCCTCTTT 59.085 55.000 0.00 0.00 0.00 2.52
995 4009 0.179070 GCCTAGCCCTTCCTCTTTCG 60.179 60.000 0.00 0.00 0.00 3.46
1051 4065 2.032681 GGAACACCAAGCCGAGCT 59.967 61.111 0.00 0.00 42.56 4.09
1052 4066 2.035442 GGAACACCAAGCCGAGCTC 61.035 63.158 2.73 2.73 38.25 4.09
1053 4067 2.032681 AACACCAAGCCGAGCTCC 59.967 61.111 8.47 0.00 38.25 4.70
1054 4068 2.731691 GAACACCAAGCCGAGCTCCA 62.732 60.000 8.47 0.00 38.25 3.86
1055 4069 2.129555 AACACCAAGCCGAGCTCCAT 62.130 55.000 8.47 0.00 38.25 3.41
1056 4070 2.110967 CACCAAGCCGAGCTCCATG 61.111 63.158 8.47 2.03 38.25 3.66
1057 4071 2.515523 CCAAGCCGAGCTCCATGG 60.516 66.667 4.97 4.97 38.25 3.66
1058 4072 2.586245 CAAGCCGAGCTCCATGGA 59.414 61.111 15.27 15.27 38.25 3.41
1059 4073 1.523258 CAAGCCGAGCTCCATGGAG 60.523 63.158 33.73 33.73 38.25 3.86
1060 4074 2.739996 AAGCCGAGCTCCATGGAGG 61.740 63.158 36.92 25.05 38.25 4.30
1061 4075 3.157252 GCCGAGCTCCATGGAGGA 61.157 66.667 36.92 7.69 46.75 3.71
1070 4084 2.755952 TCCATGGAGGAGATCGAGAA 57.244 50.000 11.44 0.00 43.07 2.87
1072 4086 2.896044 TCCATGGAGGAGATCGAGAATG 59.104 50.000 11.44 0.00 43.07 2.67
1074 4088 1.709578 TGGAGGAGATCGAGAATGGG 58.290 55.000 0.00 0.00 0.00 4.00
1075 4089 0.972883 GGAGGAGATCGAGAATGGGG 59.027 60.000 0.00 0.00 0.00 4.96
1076 4090 1.481428 GGAGGAGATCGAGAATGGGGA 60.481 57.143 0.00 0.00 0.00 4.81
1128 4142 2.364448 GAGGAGGCGGAGAAGGGT 60.364 66.667 0.00 0.00 0.00 4.34
1137 4151 1.208293 GCGGAGAAGGGTGAGATCTTT 59.792 52.381 0.00 0.00 0.00 2.52
1261 4281 2.362369 CCAGCCAGATCCGTCCACT 61.362 63.158 0.00 0.00 0.00 4.00
1268 4288 0.534412 AGATCCGTCCACTGCTTCAG 59.466 55.000 0.00 0.00 37.52 3.02
1278 4298 2.049156 TGCTTCAGGTGCGTCTCG 60.049 61.111 0.00 0.00 0.00 4.04
1330 4350 2.263741 AACTGCAAGAAGCTGCCCG 61.264 57.895 0.00 0.00 45.14 6.13
1392 4415 0.676782 GGTATCGCCACCACTTTGCT 60.677 55.000 0.81 0.00 38.55 3.91
1476 4505 2.763215 GGCATCACCCAGGTGGAA 59.237 61.111 16.63 0.00 45.43 3.53
1603 4660 3.127533 AAACGCAGGAGCCGATGC 61.128 61.111 0.00 0.00 39.09 3.91
1607 4664 2.747460 GCAGGAGCCGATGCACAA 60.747 61.111 0.00 0.00 42.11 3.33
1650 4707 2.427453 GGCTTTCGATCCAGTAGTCTCA 59.573 50.000 0.00 0.00 0.00 3.27
1674 4731 5.609423 TCCCATTTCCATGTTCTTTGTTTG 58.391 37.500 0.00 0.00 0.00 2.93
1681 4738 1.028905 TGTTCTTTGTTTGGAGCGGG 58.971 50.000 0.00 0.00 0.00 6.13
1803 4869 6.038161 TGTTCAGGAGTAAATGTGTCTTTGTG 59.962 38.462 0.00 0.00 0.00 3.33
1953 5019 0.037975 GATTGTTGCAGGGGTGCTTG 60.038 55.000 0.00 0.00 35.49 4.01
1990 5057 7.989826 AGCTCCTGTCAATAATAACAATGAAC 58.010 34.615 0.00 0.00 0.00 3.18
2051 5118 3.117851 TGTGACAGTAAACAATGGGTCCA 60.118 43.478 0.00 0.00 0.00 4.02
2114 5181 1.420138 ACAGAAGTACAGGGTGGTTGG 59.580 52.381 0.00 0.00 0.00 3.77
2161 5231 0.911769 CCTGGCTCATTGTGGAGGTA 59.088 55.000 0.00 0.00 35.41 3.08
2212 5289 6.615088 CATCAGAAAGTTGGTTGTATCCTTG 58.385 40.000 0.00 0.00 0.00 3.61
2273 6324 1.070134 TCCTCTGTTCTCAAACCACCG 59.930 52.381 0.00 0.00 34.28 4.94
2383 6434 1.486310 TGCTGGTGCTTATACTCCTGG 59.514 52.381 0.00 0.00 40.48 4.45
2408 6466 4.934001 TGCTTGATTTCTAGTTCAGAGCAG 59.066 41.667 16.05 5.98 34.32 4.24
2484 6551 2.350772 CCTTGTTCTTGTTTGCCTAGCG 60.351 50.000 0.00 0.00 0.00 4.26
2522 6592 4.324254 GGACATGTCTTAGTTTCATGGGGA 60.324 45.833 24.50 0.00 41.91 4.81
2564 6634 4.848357 CCCTCTTGTCCATAACAATCAGT 58.152 43.478 0.00 0.00 46.53 3.41
2565 6635 5.256474 CCCTCTTGTCCATAACAATCAGTT 58.744 41.667 0.00 0.00 46.53 3.16
2566 6636 6.414732 CCCTCTTGTCCATAACAATCAGTTA 58.585 40.000 0.00 0.00 46.53 2.24
2649 6728 4.322080 TCAGTCAGACTTGTTACTGGTG 57.678 45.455 0.00 0.00 39.80 4.17
2733 6856 5.890424 TTATTTGGGTTTGCTGTAGCTAC 57.110 39.130 17.30 17.30 42.66 3.58
2741 6865 4.878397 GGTTTGCTGTAGCTACTGATTCAT 59.122 41.667 28.86 0.00 42.66 2.57
2836 6968 2.364970 TGATGAAAACAAAGTGCCAGGG 59.635 45.455 0.00 0.00 0.00 4.45
2860 6992 4.613944 CATGCATGTTTGGTCCATCATAC 58.386 43.478 18.91 5.65 0.00 2.39
2861 6993 3.966979 TGCATGTTTGGTCCATCATACT 58.033 40.909 8.97 0.00 0.00 2.12
2862 6994 3.695556 TGCATGTTTGGTCCATCATACTG 59.304 43.478 8.97 2.58 0.00 2.74
2863 6995 3.696051 GCATGTTTGGTCCATCATACTGT 59.304 43.478 8.97 0.00 0.00 3.55
2864 6996 4.881273 GCATGTTTGGTCCATCATACTGTA 59.119 41.667 8.97 0.00 0.00 2.74
2907 7039 7.732222 ATGAAAAATAGGATTTTGGCAGGTA 57.268 32.000 0.00 0.00 32.85 3.08
2982 7166 2.028476 TGCGCTCTTAACTAAAGCCTGA 60.028 45.455 9.73 0.00 34.97 3.86
2983 7167 3.198872 GCGCTCTTAACTAAAGCCTGAT 58.801 45.455 0.00 0.00 34.97 2.90
2985 7169 4.184629 CGCTCTTAACTAAAGCCTGATGT 58.815 43.478 0.00 0.00 34.97 3.06
2986 7170 4.033358 CGCTCTTAACTAAAGCCTGATGTG 59.967 45.833 0.00 0.00 34.97 3.21
2987 7171 4.201861 GCTCTTAACTAAAGCCTGATGTGC 60.202 45.833 0.00 0.00 34.97 4.57
2988 7172 4.261801 TCTTAACTAAAGCCTGATGTGCC 58.738 43.478 0.00 0.00 34.97 5.01
2989 7173 2.887151 AACTAAAGCCTGATGTGCCT 57.113 45.000 0.00 0.00 0.00 4.75
2990 7174 5.188948 TCTTAACTAAAGCCTGATGTGCCTA 59.811 40.000 0.00 0.00 34.97 3.93
2991 7175 3.550437 ACTAAAGCCTGATGTGCCTAG 57.450 47.619 0.00 0.00 0.00 3.02
2993 7177 4.030913 ACTAAAGCCTGATGTGCCTAGTA 58.969 43.478 0.00 0.00 30.38 1.82
2994 7178 4.656112 ACTAAAGCCTGATGTGCCTAGTAT 59.344 41.667 0.00 0.00 30.38 2.12
2995 7179 5.839063 ACTAAAGCCTGATGTGCCTAGTATA 59.161 40.000 0.00 0.00 30.38 1.47
2996 7180 5.630415 AAAGCCTGATGTGCCTAGTATAA 57.370 39.130 0.00 0.00 0.00 0.98
2997 7181 4.881019 AGCCTGATGTGCCTAGTATAAG 57.119 45.455 0.00 0.00 0.00 1.73
2998 7182 3.007398 AGCCTGATGTGCCTAGTATAAGC 59.993 47.826 0.00 0.00 0.00 3.09
2999 7183 3.007398 GCCTGATGTGCCTAGTATAAGCT 59.993 47.826 0.00 0.00 0.00 3.74
3000 7184 4.220821 GCCTGATGTGCCTAGTATAAGCTA 59.779 45.833 0.00 0.00 0.00 3.32
3001 7185 5.715070 CCTGATGTGCCTAGTATAAGCTAC 58.285 45.833 0.00 0.00 0.00 3.58
3002 7186 5.478679 CCTGATGTGCCTAGTATAAGCTACT 59.521 44.000 0.00 0.00 0.00 2.57
3003 7187 6.659668 CCTGATGTGCCTAGTATAAGCTACTA 59.340 42.308 0.00 0.00 0.00 1.82
3004 7188 7.340743 CCTGATGTGCCTAGTATAAGCTACTAT 59.659 40.741 0.00 0.00 30.57 2.12
3005 7189 9.397280 CTGATGTGCCTAGTATAAGCTACTATA 57.603 37.037 0.00 0.00 30.57 1.31
3006 7190 9.922477 TGATGTGCCTAGTATAAGCTACTATAT 57.078 33.333 0.00 0.00 30.57 0.86
3008 7192 9.922477 ATGTGCCTAGTATAAGCTACTATATGA 57.078 33.333 0.00 0.00 30.57 2.15
3009 7193 9.749340 TGTGCCTAGTATAAGCTACTATATGAA 57.251 33.333 0.00 0.00 30.57 2.57
3011 7195 9.976776 TGCCTAGTATAAGCTACTATATGAAGT 57.023 33.333 0.00 0.00 30.57 3.01
3020 7204 8.879342 AAGCTACTATATGAAGTCAATGACAC 57.121 34.615 16.38 9.56 34.60 3.67
3021 7205 8.243961 AGCTACTATATGAAGTCAATGACACT 57.756 34.615 16.38 1.72 34.60 3.55
3022 7206 8.140628 AGCTACTATATGAAGTCAATGACACTG 58.859 37.037 16.38 0.00 34.60 3.66
3023 7207 8.138074 GCTACTATATGAAGTCAATGACACTGA 58.862 37.037 16.38 0.00 34.60 3.41
3024 7208 9.457110 CTACTATATGAAGTCAATGACACTGAC 57.543 37.037 16.38 8.99 42.95 3.51
3025 7209 7.840931 ACTATATGAAGTCAATGACACTGACA 58.159 34.615 18.44 8.04 44.68 3.58
3026 7210 7.978414 ACTATATGAAGTCAATGACACTGACAG 59.022 37.037 18.44 8.01 44.68 3.51
3027 7211 3.133691 TGAAGTCAATGACACTGACAGC 58.866 45.455 18.44 10.26 44.68 4.40
3028 7212 3.181462 TGAAGTCAATGACACTGACAGCT 60.181 43.478 18.44 3.26 44.68 4.24
3029 7213 2.763933 AGTCAATGACACTGACAGCTG 58.236 47.619 18.44 13.48 44.68 4.24
3030 7214 1.802960 GTCAATGACACTGACAGCTGG 59.197 52.381 19.93 2.38 42.32 4.85
3031 7215 1.693606 TCAATGACACTGACAGCTGGA 59.306 47.619 19.93 2.80 0.00 3.86
3032 7216 2.104622 TCAATGACACTGACAGCTGGAA 59.895 45.455 19.93 4.41 0.00 3.53
3033 7217 2.469274 ATGACACTGACAGCTGGAAG 57.531 50.000 19.93 16.77 0.00 3.46
3034 7218 1.413118 TGACACTGACAGCTGGAAGA 58.587 50.000 19.93 0.00 34.07 2.87
3035 7219 1.069204 TGACACTGACAGCTGGAAGAC 59.931 52.381 19.93 11.57 34.07 3.01
3036 7220 1.069204 GACACTGACAGCTGGAAGACA 59.931 52.381 19.93 8.86 34.07 3.41
3037 7221 1.486310 ACACTGACAGCTGGAAGACAA 59.514 47.619 19.93 0.00 34.07 3.18
3038 7222 1.869767 CACTGACAGCTGGAAGACAAC 59.130 52.381 19.93 0.00 34.07 3.32
3039 7223 1.143305 CTGACAGCTGGAAGACAACG 58.857 55.000 19.93 0.00 34.07 4.10
3040 7224 0.464036 TGACAGCTGGAAGACAACGT 59.536 50.000 19.93 0.00 34.07 3.99
3041 7225 1.140816 GACAGCTGGAAGACAACGTC 58.859 55.000 19.93 0.00 34.07 4.34
3042 7226 0.464036 ACAGCTGGAAGACAACGTCA 59.536 50.000 19.93 0.00 34.07 4.35
3043 7227 1.070758 ACAGCTGGAAGACAACGTCAT 59.929 47.619 19.93 0.00 34.07 3.06
3044 7228 2.146342 CAGCTGGAAGACAACGTCATT 58.854 47.619 5.57 0.00 34.07 2.57
3045 7229 2.158449 CAGCTGGAAGACAACGTCATTC 59.842 50.000 5.57 0.00 34.07 2.67
3046 7230 2.143122 GCTGGAAGACAACGTCATTCA 58.857 47.619 0.00 0.00 34.07 2.57
3047 7231 2.744202 GCTGGAAGACAACGTCATTCAT 59.256 45.455 0.00 0.00 34.07 2.57
3048 7232 3.181516 GCTGGAAGACAACGTCATTCATC 60.182 47.826 0.00 0.00 34.07 2.92
3049 7233 3.996363 CTGGAAGACAACGTCATTCATCA 59.004 43.478 0.00 0.00 34.07 3.07
3050 7234 4.578871 TGGAAGACAACGTCATTCATCAT 58.421 39.130 0.00 0.00 34.60 2.45
3051 7235 5.729510 TGGAAGACAACGTCATTCATCATA 58.270 37.500 0.00 0.00 34.60 2.15
3052 7236 6.348498 TGGAAGACAACGTCATTCATCATAT 58.652 36.000 0.00 0.00 34.60 1.78
3053 7237 6.258507 TGGAAGACAACGTCATTCATCATATG 59.741 38.462 0.00 0.00 34.60 1.78
3054 7238 6.479990 GGAAGACAACGTCATTCATCATATGA 59.520 38.462 8.10 8.10 34.47 2.15
3055 7239 7.172190 GGAAGACAACGTCATTCATCATATGAT 59.828 37.037 12.62 12.62 35.54 2.45
3056 7240 7.417496 AGACAACGTCATTCATCATATGATG 57.583 36.000 31.62 31.62 42.72 3.07
3057 7241 7.212274 AGACAACGTCATTCATCATATGATGA 58.788 34.615 34.48 34.48 45.19 2.92
3058 7242 7.170489 AGACAACGTCATTCATCATATGATGAC 59.830 37.037 36.82 28.13 45.78 3.06
3059 7243 7.170489 GACAACGTCATTCATCATATGATGACT 59.830 37.037 36.82 30.90 44.44 3.41
3089 7273 9.502091 AATATTGTTGACTAGAAGTACTTTGCA 57.498 29.630 10.02 1.60 0.00 4.08
3090 7274 7.801716 ATTGTTGACTAGAAGTACTTTGCAA 57.198 32.000 10.02 0.00 0.00 4.08
3091 7275 6.844696 TGTTGACTAGAAGTACTTTGCAAG 57.155 37.500 10.02 7.58 0.00 4.01
3092 7276 6.578944 TGTTGACTAGAAGTACTTTGCAAGA 58.421 36.000 10.02 6.18 0.00 3.02
3093 7277 7.217200 TGTTGACTAGAAGTACTTTGCAAGAT 58.783 34.615 10.02 0.00 0.00 2.40
3094 7278 8.364894 TGTTGACTAGAAGTACTTTGCAAGATA 58.635 33.333 10.02 0.00 0.00 1.98
3095 7279 9.204570 GTTGACTAGAAGTACTTTGCAAGATAA 57.795 33.333 10.02 4.16 0.00 1.75
3096 7280 9.944376 TTGACTAGAAGTACTTTGCAAGATAAT 57.056 29.630 10.02 0.00 0.00 1.28
3135 7319 5.476091 AAAAAGGGTTTGTGTCAACAAGA 57.524 34.783 0.00 0.00 46.66 3.02
3136 7320 5.476091 AAAAGGGTTTGTGTCAACAAGAA 57.524 34.783 0.00 0.00 46.66 2.52
3137 7321 5.476091 AAAGGGTTTGTGTCAACAAGAAA 57.524 34.783 0.00 0.00 46.66 2.52
3138 7322 4.718940 AGGGTTTGTGTCAACAAGAAAG 57.281 40.909 0.00 0.00 46.66 2.62
3139 7323 4.086457 AGGGTTTGTGTCAACAAGAAAGT 58.914 39.130 0.00 0.00 46.66 2.66
3140 7324 4.526650 AGGGTTTGTGTCAACAAGAAAGTT 59.473 37.500 0.00 0.00 46.66 2.66
3141 7325 5.712917 AGGGTTTGTGTCAACAAGAAAGTTA 59.287 36.000 0.00 0.00 46.66 2.24
3142 7326 6.379988 AGGGTTTGTGTCAACAAGAAAGTTAT 59.620 34.615 0.00 0.00 46.66 1.89
3143 7327 7.039270 GGGTTTGTGTCAACAAGAAAGTTATT 58.961 34.615 0.00 0.00 46.66 1.40
3144 7328 7.547722 GGGTTTGTGTCAACAAGAAAGTTATTT 59.452 33.333 0.00 0.00 46.66 1.40
3145 7329 8.379902 GGTTTGTGTCAACAAGAAAGTTATTTG 58.620 33.333 0.00 0.00 46.66 2.32
3146 7330 8.921670 GTTTGTGTCAACAAGAAAGTTATTTGT 58.078 29.630 0.42 0.42 46.66 2.83
3147 7331 8.682128 TTGTGTCAACAAGAAAGTTATTTGTC 57.318 30.769 5.64 0.00 41.41 3.18
3148 7332 7.254852 TGTGTCAACAAGAAAGTTATTTGTCC 58.745 34.615 5.64 0.38 34.18 4.02
3149 7333 6.695713 GTGTCAACAAGAAAGTTATTTGTCCC 59.304 38.462 5.64 0.13 34.18 4.46
3150 7334 6.605594 TGTCAACAAGAAAGTTATTTGTCCCT 59.394 34.615 5.64 0.00 34.18 4.20
3151 7335 7.776030 TGTCAACAAGAAAGTTATTTGTCCCTA 59.224 33.333 5.64 0.00 34.18 3.53
3152 7336 8.290325 GTCAACAAGAAAGTTATTTGTCCCTAG 58.710 37.037 5.64 0.00 34.18 3.02
3153 7337 7.447238 TCAACAAGAAAGTTATTTGTCCCTAGG 59.553 37.037 0.06 0.06 34.18 3.02
3154 7338 5.710567 ACAAGAAAGTTATTTGTCCCTAGGC 59.289 40.000 2.05 0.00 29.55 3.93
3155 7339 5.514500 AGAAAGTTATTTGTCCCTAGGCA 57.486 39.130 2.05 0.00 0.00 4.75
3156 7340 5.887754 AGAAAGTTATTTGTCCCTAGGCAA 58.112 37.500 2.05 0.00 0.00 4.52
3157 7341 6.494059 AGAAAGTTATTTGTCCCTAGGCAAT 58.506 36.000 2.05 1.34 0.00 3.56
3158 7342 6.603599 AGAAAGTTATTTGTCCCTAGGCAATC 59.396 38.462 2.05 0.00 0.00 2.67
3159 7343 4.451900 AGTTATTTGTCCCTAGGCAATCG 58.548 43.478 2.05 0.00 0.00 3.34
3160 7344 2.348411 ATTTGTCCCTAGGCAATCGG 57.652 50.000 2.05 0.00 0.00 4.18
3161 7345 0.988832 TTTGTCCCTAGGCAATCGGT 59.011 50.000 2.05 0.00 0.00 4.69
3162 7346 1.868713 TTGTCCCTAGGCAATCGGTA 58.131 50.000 2.05 0.00 0.00 4.02
3163 7347 1.868713 TGTCCCTAGGCAATCGGTAA 58.131 50.000 2.05 0.00 0.00 2.85
3164 7348 1.483415 TGTCCCTAGGCAATCGGTAAC 59.517 52.381 2.05 0.00 0.00 2.50
3165 7349 1.483415 GTCCCTAGGCAATCGGTAACA 59.517 52.381 2.05 0.00 0.00 2.41
3166 7350 2.093341 GTCCCTAGGCAATCGGTAACAA 60.093 50.000 2.05 0.00 0.00 2.83
3167 7351 2.169769 TCCCTAGGCAATCGGTAACAAG 59.830 50.000 2.05 0.00 0.00 3.16
3168 7352 2.093128 CCCTAGGCAATCGGTAACAAGT 60.093 50.000 2.05 0.00 0.00 3.16
3169 7353 3.133362 CCCTAGGCAATCGGTAACAAGTA 59.867 47.826 2.05 0.00 0.00 2.24
3170 7354 4.117685 CCTAGGCAATCGGTAACAAGTAC 58.882 47.826 0.00 0.00 0.00 2.73
3182 7366 6.594284 GGTAACAAGTACCGGTAATCATTC 57.406 41.667 17.78 2.30 43.08 2.67
3183 7367 6.343703 GGTAACAAGTACCGGTAATCATTCT 58.656 40.000 17.78 4.99 43.08 2.40
3184 7368 6.820152 GGTAACAAGTACCGGTAATCATTCTT 59.180 38.462 17.78 11.38 43.08 2.52
3185 7369 6.737254 AACAAGTACCGGTAATCATTCTTG 57.263 37.500 26.58 26.58 37.58 3.02
3186 7370 5.801380 ACAAGTACCGGTAATCATTCTTGT 58.199 37.500 27.53 27.53 39.15 3.16
3187 7371 6.938507 ACAAGTACCGGTAATCATTCTTGTA 58.061 36.000 29.95 2.93 41.13 2.41
3188 7372 7.388437 ACAAGTACCGGTAATCATTCTTGTAA 58.612 34.615 29.95 2.52 41.13 2.41
3189 7373 8.044908 ACAAGTACCGGTAATCATTCTTGTAAT 58.955 33.333 29.95 15.51 41.13 1.89
3190 7374 8.889717 CAAGTACCGGTAATCATTCTTGTAATT 58.110 33.333 22.82 2.93 0.00 1.40
3191 7375 8.658499 AGTACCGGTAATCATTCTTGTAATTC 57.342 34.615 17.78 0.00 0.00 2.17
3192 7376 8.483758 AGTACCGGTAATCATTCTTGTAATTCT 58.516 33.333 17.78 0.00 0.00 2.40
3193 7377 9.754382 GTACCGGTAATCATTCTTGTAATTCTA 57.246 33.333 17.78 0.00 0.00 2.10
3206 7390 8.657387 TCTTGTAATTCTATATGAGGGAGAGG 57.343 38.462 0.00 0.00 0.00 3.69
3207 7391 6.859112 TGTAATTCTATATGAGGGAGAGGC 57.141 41.667 0.00 0.00 0.00 4.70
3208 7392 6.322931 TGTAATTCTATATGAGGGAGAGGCA 58.677 40.000 0.00 0.00 0.00 4.75
3209 7393 6.962311 TGTAATTCTATATGAGGGAGAGGCAT 59.038 38.462 0.00 0.00 0.00 4.40
3210 7394 8.122481 TGTAATTCTATATGAGGGAGAGGCATA 58.878 37.037 0.00 0.00 0.00 3.14
3211 7395 9.153479 GTAATTCTATATGAGGGAGAGGCATAT 57.847 37.037 0.00 0.00 38.41 1.78
3212 7396 7.615039 ATTCTATATGAGGGAGAGGCATATG 57.385 40.000 0.00 0.00 36.29 1.78
3213 7397 6.347061 TCTATATGAGGGAGAGGCATATGA 57.653 41.667 6.97 0.00 36.29 2.15
3214 7398 6.372104 TCTATATGAGGGAGAGGCATATGAG 58.628 44.000 6.97 0.00 36.29 2.90
3215 7399 1.346062 TGAGGGAGAGGCATATGAGC 58.654 55.000 6.97 0.00 0.00 4.26
3216 7400 1.132913 TGAGGGAGAGGCATATGAGCT 60.133 52.381 6.97 0.00 34.17 4.09
3217 7401 2.110721 TGAGGGAGAGGCATATGAGCTA 59.889 50.000 6.97 0.00 34.17 3.32
3218 7402 3.169099 GAGGGAGAGGCATATGAGCTAA 58.831 50.000 6.97 0.00 34.17 3.09
3219 7403 2.903135 AGGGAGAGGCATATGAGCTAAC 59.097 50.000 6.97 0.00 34.17 2.34
3220 7404 2.634940 GGGAGAGGCATATGAGCTAACA 59.365 50.000 6.97 0.00 34.17 2.41
3221 7405 3.262915 GGGAGAGGCATATGAGCTAACAT 59.737 47.826 6.97 0.00 34.17 2.71
3222 7406 4.467795 GGGAGAGGCATATGAGCTAACATA 59.532 45.833 6.97 0.00 37.20 2.29
3223 7407 5.415221 GGAGAGGCATATGAGCTAACATAC 58.585 45.833 6.97 0.00 35.91 2.39
3224 7408 5.186797 GGAGAGGCATATGAGCTAACATACT 59.813 44.000 6.97 0.00 35.91 2.12
3225 7409 6.295575 GGAGAGGCATATGAGCTAACATACTT 60.296 42.308 6.97 0.00 35.91 2.24
3226 7410 7.072263 AGAGGCATATGAGCTAACATACTTT 57.928 36.000 6.97 0.00 35.91 2.66
3227 7411 7.158021 AGAGGCATATGAGCTAACATACTTTC 58.842 38.462 6.97 0.00 35.91 2.62
3228 7412 7.016072 AGAGGCATATGAGCTAACATACTTTCT 59.984 37.037 6.97 0.00 35.91 2.52
3229 7413 7.158021 AGGCATATGAGCTAACATACTTTCTC 58.842 38.462 6.97 0.00 35.91 2.87
3230 7414 7.016072 AGGCATATGAGCTAACATACTTTCTCT 59.984 37.037 6.97 0.00 35.91 3.10
3231 7415 8.307483 GGCATATGAGCTAACATACTTTCTCTA 58.693 37.037 6.97 0.00 35.91 2.43
3232 7416 9.134734 GCATATGAGCTAACATACTTTCTCTAC 57.865 37.037 6.97 0.00 35.91 2.59
3236 7420 7.548097 TGAGCTAACATACTTTCTCTACTTGG 58.452 38.462 0.00 0.00 0.00 3.61
3237 7421 7.396339 TGAGCTAACATACTTTCTCTACTTGGA 59.604 37.037 0.00 0.00 0.00 3.53
3238 7422 8.312669 AGCTAACATACTTTCTCTACTTGGAT 57.687 34.615 0.00 0.00 0.00 3.41
3239 7423 8.417884 AGCTAACATACTTTCTCTACTTGGATC 58.582 37.037 0.00 0.00 0.00 3.36
3240 7424 8.198109 GCTAACATACTTTCTCTACTTGGATCA 58.802 37.037 0.00 0.00 0.00 2.92
3245 7429 9.149225 CATACTTTCTCTACTTGGATCATATGC 57.851 37.037 0.00 0.00 0.00 3.14
3246 7430 7.129457 ACTTTCTCTACTTGGATCATATGCA 57.871 36.000 0.00 0.00 0.00 3.96
3247 7431 6.989169 ACTTTCTCTACTTGGATCATATGCAC 59.011 38.462 0.00 0.00 0.00 4.57
3248 7432 6.737720 TTCTCTACTTGGATCATATGCACT 57.262 37.500 0.00 0.00 0.00 4.40
3249 7433 6.737720 TCTCTACTTGGATCATATGCACTT 57.262 37.500 0.00 0.00 0.00 3.16
3250 7434 7.839680 TCTCTACTTGGATCATATGCACTTA 57.160 36.000 0.00 0.00 0.00 2.24
3251 7435 8.427902 TCTCTACTTGGATCATATGCACTTAT 57.572 34.615 0.00 0.00 0.00 1.73
3252 7436 8.309656 TCTCTACTTGGATCATATGCACTTATG 58.690 37.037 0.00 0.00 0.00 1.90
3253 7437 8.193953 TCTACTTGGATCATATGCACTTATGA 57.806 34.615 11.45 11.45 41.52 2.15
3254 7438 8.819845 TCTACTTGGATCATATGCACTTATGAT 58.180 33.333 18.49 18.49 46.84 2.45
3255 7439 9.445878 CTACTTGGATCATATGCACTTATGATT 57.554 33.333 19.14 9.29 45.13 2.57
3256 7440 8.107399 ACTTGGATCATATGCACTTATGATTG 57.893 34.615 19.14 13.59 45.13 2.67
3257 7441 7.176165 ACTTGGATCATATGCACTTATGATTGG 59.824 37.037 19.14 13.31 45.13 3.16
3258 7442 6.781943 TGGATCATATGCACTTATGATTGGA 58.218 36.000 19.14 7.89 45.13 3.53
3259 7443 6.656270 TGGATCATATGCACTTATGATTGGAC 59.344 38.462 19.14 12.60 45.13 4.02
3260 7444 6.094603 GGATCATATGCACTTATGATTGGACC 59.905 42.308 19.14 13.62 45.13 4.46
3261 7445 5.316167 TCATATGCACTTATGATTGGACCC 58.684 41.667 6.01 0.00 34.46 4.46
3262 7446 2.435372 TGCACTTATGATTGGACCCC 57.565 50.000 0.00 0.00 0.00 4.95
3263 7447 1.922447 TGCACTTATGATTGGACCCCT 59.078 47.619 0.00 0.00 0.00 4.79
3264 7448 3.119319 TGCACTTATGATTGGACCCCTA 58.881 45.455 0.00 0.00 0.00 3.53
3265 7449 3.136443 TGCACTTATGATTGGACCCCTAG 59.864 47.826 0.00 0.00 0.00 3.02
3266 7450 3.744660 CACTTATGATTGGACCCCTAGC 58.255 50.000 0.00 0.00 0.00 3.42
3267 7451 3.136443 CACTTATGATTGGACCCCTAGCA 59.864 47.826 0.00 0.00 0.00 3.49
3268 7452 3.785887 ACTTATGATTGGACCCCTAGCAA 59.214 43.478 0.00 0.00 27.97 3.91
3269 7453 4.141390 ACTTATGATTGGACCCCTAGCAAG 60.141 45.833 0.00 0.00 27.97 4.01
3270 7454 0.255890 TGATTGGACCCCTAGCAAGC 59.744 55.000 0.00 0.00 0.00 4.01
3271 7455 0.255890 GATTGGACCCCTAGCAAGCA 59.744 55.000 0.00 0.00 0.00 3.91
3272 7456 0.929244 ATTGGACCCCTAGCAAGCAT 59.071 50.000 0.00 0.00 0.00 3.79
3273 7457 0.255890 TTGGACCCCTAGCAAGCATC 59.744 55.000 0.00 0.00 0.00 3.91
3274 7458 1.149401 GGACCCCTAGCAAGCATCC 59.851 63.158 0.00 0.00 0.00 3.51
3275 7459 1.635817 GGACCCCTAGCAAGCATCCA 61.636 60.000 0.00 0.00 0.00 3.41
3276 7460 0.464554 GACCCCTAGCAAGCATCCAC 60.465 60.000 0.00 0.00 0.00 4.02
3277 7461 1.207488 ACCCCTAGCAAGCATCCACA 61.207 55.000 0.00 0.00 0.00 4.17
3278 7462 0.034186 CCCCTAGCAAGCATCCACAA 60.034 55.000 0.00 0.00 0.00 3.33
3279 7463 1.098050 CCCTAGCAAGCATCCACAAC 58.902 55.000 0.00 0.00 0.00 3.32
3280 7464 1.340405 CCCTAGCAAGCATCCACAACT 60.340 52.381 0.00 0.00 0.00 3.16
3281 7465 2.092968 CCCTAGCAAGCATCCACAACTA 60.093 50.000 0.00 0.00 0.00 2.24
3282 7466 2.939103 CCTAGCAAGCATCCACAACTAC 59.061 50.000 0.00 0.00 0.00 2.73
3283 7467 2.867109 AGCAAGCATCCACAACTACT 57.133 45.000 0.00 0.00 0.00 2.57
3284 7468 3.981071 AGCAAGCATCCACAACTACTA 57.019 42.857 0.00 0.00 0.00 1.82
3285 7469 4.286297 AGCAAGCATCCACAACTACTAA 57.714 40.909 0.00 0.00 0.00 2.24
3286 7470 4.651778 AGCAAGCATCCACAACTACTAAA 58.348 39.130 0.00 0.00 0.00 1.85
3287 7471 4.697352 AGCAAGCATCCACAACTACTAAAG 59.303 41.667 0.00 0.00 0.00 1.85
3288 7472 4.695455 GCAAGCATCCACAACTACTAAAGA 59.305 41.667 0.00 0.00 0.00 2.52
3289 7473 5.355350 GCAAGCATCCACAACTACTAAAGAT 59.645 40.000 0.00 0.00 0.00 2.40
3290 7474 6.457528 GCAAGCATCCACAACTACTAAAGATC 60.458 42.308 0.00 0.00 0.00 2.75
3291 7475 6.299805 AGCATCCACAACTACTAAAGATCA 57.700 37.500 0.00 0.00 0.00 2.92
3292 7476 6.893583 AGCATCCACAACTACTAAAGATCAT 58.106 36.000 0.00 0.00 0.00 2.45
3293 7477 7.341805 AGCATCCACAACTACTAAAGATCATT 58.658 34.615 0.00 0.00 0.00 2.57
3294 7478 8.486210 AGCATCCACAACTACTAAAGATCATTA 58.514 33.333 0.00 0.00 0.00 1.90
3295 7479 9.109393 GCATCCACAACTACTAAAGATCATTAA 57.891 33.333 0.00 0.00 0.00 1.40
3297 7481 9.838339 ATCCACAACTACTAAAGATCATTAAGG 57.162 33.333 0.00 0.00 0.00 2.69
3298 7482 8.822805 TCCACAACTACTAAAGATCATTAAGGT 58.177 33.333 0.00 0.00 0.00 3.50
3299 7483 9.099454 CCACAACTACTAAAGATCATTAAGGTC 57.901 37.037 0.00 0.00 0.00 3.85
3300 7484 9.653287 CACAACTACTAAAGATCATTAAGGTCA 57.347 33.333 0.00 0.00 0.00 4.02
3307 7491 9.178758 ACTAAAGATCATTAAGGTCATGAAACC 57.821 33.333 0.00 0.00 39.80 3.27
3308 7492 7.410120 AAAGATCATTAAGGTCATGAAACCC 57.590 36.000 0.00 0.00 40.42 4.11
3309 7493 6.078456 AGATCATTAAGGTCATGAAACCCA 57.922 37.500 0.00 0.00 40.42 4.51
3310 7494 6.493166 AGATCATTAAGGTCATGAAACCCAA 58.507 36.000 0.00 0.00 40.42 4.12
3311 7495 5.975693 TCATTAAGGTCATGAAACCCAAC 57.024 39.130 0.00 0.00 40.42 3.77
3312 7496 4.770010 TCATTAAGGTCATGAAACCCAACC 59.230 41.667 0.00 0.00 40.42 3.77
3313 7497 2.765689 AAGGTCATGAAACCCAACCA 57.234 45.000 0.00 0.00 40.42 3.67
3314 7498 2.999185 AGGTCATGAAACCCAACCAT 57.001 45.000 0.00 0.00 40.42 3.55
3315 7499 4.396357 AAGGTCATGAAACCCAACCATA 57.604 40.909 0.00 0.00 40.42 2.74
3316 7500 3.968265 AGGTCATGAAACCCAACCATAG 58.032 45.455 0.00 0.00 40.42 2.23
3317 7501 2.427095 GGTCATGAAACCCAACCATAGC 59.573 50.000 0.00 0.00 32.82 2.97
3318 7502 3.088532 GTCATGAAACCCAACCATAGCA 58.911 45.455 0.00 0.00 0.00 3.49
3319 7503 3.701040 GTCATGAAACCCAACCATAGCAT 59.299 43.478 0.00 0.00 0.00 3.79
3320 7504 4.160252 GTCATGAAACCCAACCATAGCATT 59.840 41.667 0.00 0.00 0.00 3.56
3321 7505 5.359576 GTCATGAAACCCAACCATAGCATTA 59.640 40.000 0.00 0.00 0.00 1.90
3322 7506 5.954752 TCATGAAACCCAACCATAGCATTAA 59.045 36.000 0.00 0.00 0.00 1.40
3323 7507 5.913137 TGAAACCCAACCATAGCATTAAG 57.087 39.130 0.00 0.00 0.00 1.85
3324 7508 5.329399 TGAAACCCAACCATAGCATTAAGT 58.671 37.500 0.00 0.00 0.00 2.24
3325 7509 6.486056 TGAAACCCAACCATAGCATTAAGTA 58.514 36.000 0.00 0.00 0.00 2.24
3326 7510 7.122715 TGAAACCCAACCATAGCATTAAGTAT 58.877 34.615 0.00 0.00 0.00 2.12
3327 7511 7.284489 TGAAACCCAACCATAGCATTAAGTATC 59.716 37.037 0.00 0.00 0.00 2.24
3328 7512 6.260700 ACCCAACCATAGCATTAAGTATCA 57.739 37.500 0.00 0.00 0.00 2.15
3329 7513 6.668645 ACCCAACCATAGCATTAAGTATCAA 58.331 36.000 0.00 0.00 0.00 2.57
3330 7514 7.297614 ACCCAACCATAGCATTAAGTATCAAT 58.702 34.615 0.00 0.00 0.00 2.57
3331 7515 7.784550 ACCCAACCATAGCATTAAGTATCAATT 59.215 33.333 0.00 0.00 0.00 2.32
3332 7516 8.299570 CCCAACCATAGCATTAAGTATCAATTC 58.700 37.037 0.00 0.00 0.00 2.17
3333 7517 8.299570 CCAACCATAGCATTAAGTATCAATTCC 58.700 37.037 0.00 0.00 0.00 3.01
3334 7518 9.071276 CAACCATAGCATTAAGTATCAATTCCT 57.929 33.333 0.00 0.00 0.00 3.36
3335 7519 8.854614 ACCATAGCATTAAGTATCAATTCCTC 57.145 34.615 0.00 0.00 0.00 3.71
3336 7520 8.664079 ACCATAGCATTAAGTATCAATTCCTCT 58.336 33.333 0.00 0.00 0.00 3.69
3337 7521 9.512588 CCATAGCATTAAGTATCAATTCCTCTT 57.487 33.333 0.00 0.00 0.00 2.85
3345 7529 7.510675 AAGTATCAATTCCTCTTTACTCCCA 57.489 36.000 0.00 0.00 0.00 4.37
3346 7530 7.698163 AGTATCAATTCCTCTTTACTCCCAT 57.302 36.000 0.00 0.00 0.00 4.00
3347 7531 8.798975 AGTATCAATTCCTCTTTACTCCCATA 57.201 34.615 0.00 0.00 0.00 2.74
3348 7532 8.875168 AGTATCAATTCCTCTTTACTCCCATAG 58.125 37.037 0.00 0.00 0.00 2.23
3349 7533 6.500589 TCAATTCCTCTTTACTCCCATAGG 57.499 41.667 0.00 0.00 0.00 2.57
3350 7534 4.984146 ATTCCTCTTTACTCCCATAGGC 57.016 45.455 0.00 0.00 0.00 3.93
3351 7535 2.690840 TCCTCTTTACTCCCATAGGCC 58.309 52.381 0.00 0.00 0.00 5.19
3352 7536 2.022428 TCCTCTTTACTCCCATAGGCCA 60.022 50.000 5.01 0.00 0.00 5.36
3353 7537 2.982488 CCTCTTTACTCCCATAGGCCAT 59.018 50.000 5.01 0.00 0.00 4.40
3354 7538 4.140543 TCCTCTTTACTCCCATAGGCCATA 60.141 45.833 5.01 0.00 0.00 2.74
3355 7539 4.020128 CCTCTTTACTCCCATAGGCCATAC 60.020 50.000 5.01 0.00 0.00 2.39
3356 7540 3.908103 TCTTTACTCCCATAGGCCATACC 59.092 47.826 5.01 0.00 39.61 2.73
3357 7541 2.337359 TACTCCCATAGGCCATACCC 57.663 55.000 5.01 0.00 40.58 3.69
3358 7542 0.475828 ACTCCCATAGGCCATACCCC 60.476 60.000 5.01 0.00 40.58 4.95
3359 7543 0.475632 CTCCCATAGGCCATACCCCA 60.476 60.000 5.01 0.00 40.58 4.96
3360 7544 0.770557 TCCCATAGGCCATACCCCAC 60.771 60.000 5.01 0.00 40.58 4.61
3361 7545 0.772124 CCCATAGGCCATACCCCACT 60.772 60.000 5.01 0.00 40.58 4.00
3362 7546 1.149101 CCATAGGCCATACCCCACTT 58.851 55.000 5.01 0.00 40.58 3.16
3363 7547 2.344592 CCATAGGCCATACCCCACTTA 58.655 52.381 5.01 0.00 40.58 2.24
3364 7548 2.039879 CCATAGGCCATACCCCACTTAC 59.960 54.545 5.01 0.00 40.58 2.34
3365 7549 2.881266 TAGGCCATACCCCACTTACT 57.119 50.000 5.01 0.00 40.58 2.24
3366 7550 1.508256 AGGCCATACCCCACTTACTC 58.492 55.000 5.01 0.00 40.58 2.59
3367 7551 0.106149 GGCCATACCCCACTTACTCG 59.894 60.000 0.00 0.00 0.00 4.18
3368 7552 0.106149 GCCATACCCCACTTACTCGG 59.894 60.000 0.00 0.00 0.00 4.63
3369 7553 0.756903 CCATACCCCACTTACTCGGG 59.243 60.000 0.00 0.00 43.05 5.14
3373 7557 2.368591 CCCCACTTACTCGGGTTGA 58.631 57.895 0.00 0.00 41.30 3.18
3374 7558 0.688487 CCCCACTTACTCGGGTTGAA 59.312 55.000 0.00 0.00 41.30 2.69
3375 7559 1.338769 CCCCACTTACTCGGGTTGAAG 60.339 57.143 0.00 0.00 41.30 3.02
3376 7560 1.439679 CCACTTACTCGGGTTGAAGC 58.560 55.000 0.00 0.00 0.00 3.86
3377 7561 1.002087 CCACTTACTCGGGTTGAAGCT 59.998 52.381 0.00 0.00 0.00 3.74
3378 7562 2.550208 CCACTTACTCGGGTTGAAGCTT 60.550 50.000 0.00 0.00 0.00 3.74
3379 7563 2.737252 CACTTACTCGGGTTGAAGCTTC 59.263 50.000 19.89 19.89 0.00 3.86
3380 7564 2.633481 ACTTACTCGGGTTGAAGCTTCT 59.367 45.455 26.09 6.90 0.00 2.85
3381 7565 2.743636 TACTCGGGTTGAAGCTTCTG 57.256 50.000 26.09 11.43 0.00 3.02
3382 7566 0.759346 ACTCGGGTTGAAGCTTCTGT 59.241 50.000 26.09 10.89 0.00 3.41
3383 7567 1.270358 ACTCGGGTTGAAGCTTCTGTC 60.270 52.381 26.09 15.58 0.00 3.51
3384 7568 0.756294 TCGGGTTGAAGCTTCTGTCA 59.244 50.000 26.09 4.76 0.00 3.58
3385 7569 0.868406 CGGGTTGAAGCTTCTGTCAC 59.132 55.000 26.09 16.44 0.00 3.67
3386 7570 1.541233 CGGGTTGAAGCTTCTGTCACT 60.541 52.381 26.09 0.00 0.00 3.41
3387 7571 2.147150 GGGTTGAAGCTTCTGTCACTC 58.853 52.381 26.09 13.85 0.00 3.51
3388 7572 2.224402 GGGTTGAAGCTTCTGTCACTCT 60.224 50.000 26.09 0.00 0.00 3.24
3389 7573 3.063485 GGTTGAAGCTTCTGTCACTCTC 58.937 50.000 26.09 0.00 0.00 3.20
3390 7574 2.713895 TGAAGCTTCTGTCACTCTCG 57.286 50.000 26.09 0.00 0.00 4.04
3391 7575 1.336332 TGAAGCTTCTGTCACTCTCGC 60.336 52.381 26.09 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.835682 AGACAACCATGAATCAGATGGATAAAA 59.164 33.333 9.66 0.00 42.81 1.52
7 8 7.348815 AGACAACCATGAATCAGATGGATAAA 58.651 34.615 9.66 0.00 42.81 1.40
53 55 7.041721 TCTCATGTAGCTTTTATGTGTACCTG 58.958 38.462 0.00 0.00 0.00 4.00
104 106 7.154656 TCACAAGTAATCATCCTATCGATTGG 58.845 38.462 18.52 18.52 33.90 3.16
108 110 5.833667 ACCTCACAAGTAATCATCCTATCGA 59.166 40.000 0.00 0.00 0.00 3.59
144 147 9.194972 TGCATGGGTAAGACAAATGATTTATAA 57.805 29.630 0.00 0.00 0.00 0.98
145 148 8.759481 TGCATGGGTAAGACAAATGATTTATA 57.241 30.769 0.00 0.00 0.00 0.98
146 149 7.658525 TGCATGGGTAAGACAAATGATTTAT 57.341 32.000 0.00 0.00 0.00 1.40
147 150 7.658525 ATGCATGGGTAAGACAAATGATTTA 57.341 32.000 0.00 0.00 0.00 1.40
148 151 5.999205 TGCATGGGTAAGACAAATGATTT 57.001 34.783 0.00 0.00 0.00 2.17
149 152 6.407299 GGAATGCATGGGTAAGACAAATGATT 60.407 38.462 0.00 0.00 0.00 2.57
151 154 4.402155 GGAATGCATGGGTAAGACAAATGA 59.598 41.667 0.00 0.00 0.00 2.57
152 155 4.403432 AGGAATGCATGGGTAAGACAAATG 59.597 41.667 0.00 0.00 0.00 2.32
153 156 4.613437 AGGAATGCATGGGTAAGACAAAT 58.387 39.130 0.00 0.00 0.00 2.32
154 157 4.016444 GAGGAATGCATGGGTAAGACAAA 58.984 43.478 0.00 0.00 0.00 2.83
156 159 2.846206 AGAGGAATGCATGGGTAAGACA 59.154 45.455 0.00 0.00 0.00 3.41
157 160 3.118261 TCAGAGGAATGCATGGGTAAGAC 60.118 47.826 0.00 0.00 0.00 3.01
158 161 3.114606 TCAGAGGAATGCATGGGTAAGA 58.885 45.455 0.00 0.00 0.00 2.10
176 179 3.551846 ACCTGGTTGTTGTAAGGTTCAG 58.448 45.455 0.00 0.00 40.14 3.02
181 184 3.697045 TGTGAAACCTGGTTGTTGTAAGG 59.303 43.478 13.79 0.00 34.36 2.69
189 192 3.799917 GCCTTCATTGTGAAACCTGGTTG 60.800 47.826 13.79 0.00 35.73 3.77
195 198 1.401539 GCTCGCCTTCATTGTGAAACC 60.402 52.381 0.00 0.00 35.73 3.27
201 204 2.401583 TATGTGCTCGCCTTCATTGT 57.598 45.000 0.00 0.00 0.00 2.71
212 215 5.123820 TCAACTAATGGTGCTTTATGTGCTC 59.876 40.000 0.00 0.00 0.00 4.26
266 269 9.855021 GTTGAAGTAGCAAAATACATAACCATT 57.145 29.630 0.00 0.00 0.00 3.16
282 285 3.926616 TGCCTAACAGAGTTGAAGTAGC 58.073 45.455 0.00 0.00 0.00 3.58
285 288 7.553044 GGTATAATTGCCTAACAGAGTTGAAGT 59.447 37.037 0.00 0.00 0.00 3.01
294 297 8.902540 TCAAGTATGGTATAATTGCCTAACAG 57.097 34.615 4.62 0.00 0.00 3.16
300 303 7.986085 ACTCATCAAGTATGGTATAATTGCC 57.014 36.000 4.62 0.00 36.07 4.52
301 304 8.936864 GGTACTCATCAAGTATGGTATAATTGC 58.063 37.037 4.62 0.00 42.38 3.56
309 312 7.510685 AGACATATGGTACTCATCAAGTATGGT 59.489 37.037 7.80 0.00 42.38 3.55
336 339 7.389803 TTGCATACAACAATGTGTTAGCTAT 57.610 32.000 0.00 0.00 38.77 2.97
462 3249 8.174085 TCCCTATCCTTGTCTTATTTTCCAAAA 58.826 33.333 0.00 0.00 0.00 2.44
502 3289 1.282382 GCCTCCCCCAACTACAGTTA 58.718 55.000 0.00 0.00 36.32 2.24
601 3389 6.320494 AGAGCAACATATAGAAGTACTCCG 57.680 41.667 0.00 0.00 0.00 4.63
655 3445 4.378459 CCAAACATGACTAGAAGGAAACGC 60.378 45.833 0.00 0.00 0.00 4.84
684 3474 7.584987 AGAATTCACAACTTCCAGAATTTACG 58.415 34.615 8.44 0.00 39.88 3.18
736 3526 6.006275 TCTTAGAAAGAGGAAATGGGGATG 57.994 41.667 0.00 0.00 32.71 3.51
759 3767 3.815401 GGAACAACAGCACAGACACTAAT 59.185 43.478 0.00 0.00 0.00 1.73
764 3772 0.465460 GGGGAACAACAGCACAGACA 60.465 55.000 0.00 0.00 0.00 3.41
800 3812 4.681978 GCGACCGGTGGCACTTCT 62.682 66.667 33.44 0.00 34.31 2.85
809 3821 4.309950 GAACAGGGTGCGACCGGT 62.310 66.667 6.92 6.92 39.83 5.28
839 3852 1.593933 GTTTGGTTTACGACAGCGACA 59.406 47.619 0.00 0.00 41.64 4.35
861 3875 0.822811 GGGAGTCGGAAAGGTACCTC 59.177 60.000 16.64 3.39 0.00 3.85
885 3899 2.367648 TGGTGGTGGTGGTGGTCT 60.368 61.111 0.00 0.00 0.00 3.85
900 3914 2.752903 CAGAGGAAAATTAACCCGGTGG 59.247 50.000 0.00 0.00 37.80 4.61
901 3915 2.163613 GCAGAGGAAAATTAACCCGGTG 59.836 50.000 0.00 0.00 0.00 4.94
920 3934 2.781757 AGAGGAAATCATGGATCTGGCA 59.218 45.455 0.00 0.00 0.00 4.92
945 3959 3.118261 GGGTCAGGTCAGATCTGCAAATA 60.118 47.826 18.36 0.00 32.63 1.40
1040 4054 2.515523 CCATGGAGCTCGGCTTGG 60.516 66.667 5.56 8.86 39.88 3.61
1042 4056 2.739996 CCTCCATGGAGCTCGGCTT 61.740 63.158 32.97 0.00 39.88 4.35
1043 4057 3.160047 CCTCCATGGAGCTCGGCT 61.160 66.667 32.97 0.00 43.88 5.52
1044 4058 3.157252 TCCTCCATGGAGCTCGGC 61.157 66.667 32.97 0.00 40.56 5.54
1051 4065 2.755952 TTCTCGATCTCCTCCATGGA 57.244 50.000 15.27 15.27 43.86 3.41
1052 4066 2.028294 CCATTCTCGATCTCCTCCATGG 60.028 54.545 4.97 4.97 37.10 3.66
1053 4067 2.028294 CCCATTCTCGATCTCCTCCATG 60.028 54.545 0.00 0.00 0.00 3.66
1054 4068 2.255406 CCCATTCTCGATCTCCTCCAT 58.745 52.381 0.00 0.00 0.00 3.41
1055 4069 1.709578 CCCATTCTCGATCTCCTCCA 58.290 55.000 0.00 0.00 0.00 3.86
1056 4070 0.972883 CCCCATTCTCGATCTCCTCC 59.027 60.000 0.00 0.00 0.00 4.30
1057 4071 1.616374 GTCCCCATTCTCGATCTCCTC 59.384 57.143 0.00 0.00 0.00 3.71
1058 4072 1.062886 TGTCCCCATTCTCGATCTCCT 60.063 52.381 0.00 0.00 0.00 3.69
1059 4073 1.414158 TGTCCCCATTCTCGATCTCC 58.586 55.000 0.00 0.00 0.00 3.71
1060 4074 2.896685 AGATGTCCCCATTCTCGATCTC 59.103 50.000 0.00 0.00 0.00 2.75
1061 4075 2.969628 AGATGTCCCCATTCTCGATCT 58.030 47.619 0.00 0.00 0.00 2.75
1066 4080 2.432510 ACTCGAAGATGTCCCCATTCTC 59.567 50.000 0.00 0.00 33.89 2.87
1067 4081 2.169352 CACTCGAAGATGTCCCCATTCT 59.831 50.000 0.00 0.00 33.89 2.40
1068 4082 2.555199 CACTCGAAGATGTCCCCATTC 58.445 52.381 0.00 0.00 33.89 2.67
1069 4083 1.210478 CCACTCGAAGATGTCCCCATT 59.790 52.381 0.00 0.00 33.89 3.16
1070 4084 0.833287 CCACTCGAAGATGTCCCCAT 59.167 55.000 0.00 0.00 33.89 4.00
1072 4086 0.902531 TTCCACTCGAAGATGTCCCC 59.097 55.000 0.00 0.00 33.89 4.81
1074 4088 2.338500 GTGTTCCACTCGAAGATGTCC 58.662 52.381 0.00 0.00 33.89 4.02
1075 4089 2.288825 TGGTGTTCCACTCGAAGATGTC 60.289 50.000 0.00 0.00 39.03 3.06
1076 4090 1.691976 TGGTGTTCCACTCGAAGATGT 59.308 47.619 0.00 0.00 39.03 3.06
1078 4092 2.872038 GCTTGGTGTTCCACTCGAAGAT 60.872 50.000 5.28 0.00 44.22 2.40
1079 4093 1.540363 GCTTGGTGTTCCACTCGAAGA 60.540 52.381 5.28 0.00 44.22 2.87
1080 4094 0.868406 GCTTGGTGTTCCACTCGAAG 59.132 55.000 0.00 0.00 44.22 3.79
1082 4096 1.070786 GGCTTGGTGTTCCACTCGA 59.929 57.895 0.00 0.00 44.22 4.04
1128 4142 3.903714 TGGTGTTCCTCTCAAAGATCTCA 59.096 43.478 0.00 0.00 34.23 3.27
1137 4151 1.118965 TCGGCTTGGTGTTCCTCTCA 61.119 55.000 0.00 0.00 34.23 3.27
1203 4223 1.616865 AGGATGAGGTCGACGTTCAAA 59.383 47.619 20.62 6.06 0.00 2.69
1206 4226 0.179134 CCAGGATGAGGTCGACGTTC 60.179 60.000 12.67 11.55 39.69 3.95
1261 4281 2.049156 CGAGACGCACCTGAAGCA 60.049 61.111 0.00 0.00 0.00 3.91
1268 4288 4.057428 AGAGCACCGAGACGCACC 62.057 66.667 0.00 0.00 0.00 5.01
1315 4335 2.359107 CTCGGGCAGCTTCTTGCA 60.359 61.111 0.00 0.00 45.86 4.08
1330 4350 1.079057 GGAAGTCGGCAAGGGTCTC 60.079 63.158 0.00 0.00 0.00 3.36
1343 4363 2.820787 CAGAAGGACGTGTAGAGGAAGT 59.179 50.000 0.00 0.00 0.00 3.01
1485 4514 1.287503 GCGATAGAGAAGGAGGCCG 59.712 63.158 0.00 0.00 39.76 6.13
1603 4660 4.420168 CCTGCGGTATGGTTAAATTTGTG 58.580 43.478 0.00 0.00 0.00 3.33
1607 4664 3.012934 AGCCTGCGGTATGGTTAAATT 57.987 42.857 0.00 0.00 0.00 1.82
1650 4707 6.232692 CAAACAAAGAACATGGAAATGGGAT 58.767 36.000 0.00 0.00 0.00 3.85
1681 4738 3.981416 GTGATGAAAGTTTTCGGAAAGGC 59.019 43.478 3.09 1.72 40.01 4.35
1744 4801 7.150447 TCTCAACTATCCCACTGTCTCTATA 57.850 40.000 0.00 0.00 0.00 1.31
1803 4869 3.198068 CATGATGTATAGCATACCGCCC 58.802 50.000 0.00 0.00 44.04 6.13
1940 5006 2.141011 ATAGTGCAAGCACCCCTGCA 62.141 55.000 20.55 0.00 46.97 4.41
1953 5019 5.201713 TGACAGGAGCTATAACATAGTGC 57.798 43.478 0.00 0.00 0.00 4.40
1990 5057 5.827797 AGAGTGCTATCTCAGAAACTAGGAG 59.172 44.000 0.00 0.00 36.97 3.69
2161 5231 7.884877 CCACATGTCATATGATACCAAGGTATT 59.115 37.037 9.02 1.49 40.93 1.89
2212 5289 7.246674 TGTGTACACTGTTTTTCTCAAGATC 57.753 36.000 25.60 0.00 0.00 2.75
2273 6324 2.430694 AGTTTTTGGGAGGAAACACAGC 59.569 45.455 0.00 0.00 38.03 4.40
2383 6434 5.180117 TGCTCTGAACTAGAAATCAAGCAAC 59.820 40.000 19.04 0.00 37.07 4.17
2408 6466 6.403309 GCTTAATCTGTAGGTTTACCAAGCAC 60.403 42.308 1.13 0.00 38.89 4.40
2484 6551 1.388547 TGTCCAGAACAACAACCAGC 58.611 50.000 0.00 0.00 34.03 4.85
2522 6592 8.276453 AGAGGGCCTATTACAGTACAATTTAT 57.724 34.615 5.73 0.00 0.00 1.40
2649 6728 6.341316 TGCATAAAGTCAACTAGAGATCACC 58.659 40.000 0.00 0.00 0.00 4.02
2733 6856 6.696148 GCAGATCCAAAGCTTTAATGAATCAG 59.304 38.462 12.25 8.44 0.00 2.90
2741 6865 3.758554 GGTCAGCAGATCCAAAGCTTTAA 59.241 43.478 12.25 3.52 36.26 1.52
2836 6968 0.538118 ATGGACCAAACATGCATGCC 59.462 50.000 26.53 17.79 0.00 4.40
2838 6970 3.812156 ATGATGGACCAAACATGCATG 57.188 42.857 25.09 25.09 0.00 4.06
2843 6975 7.445402 GCTTATACAGTATGATGGACCAAACAT 59.555 37.037 17.52 17.52 39.69 2.71
2907 7039 3.838244 ATATGTTCATGGCCACTACGT 57.162 42.857 8.16 10.63 0.00 3.57
2974 7158 5.615289 CTTATACTAGGCACATCAGGCTTT 58.385 41.667 0.00 0.00 42.35 3.51
2982 7166 9.922477 TCATATAGTAGCTTATACTAGGCACAT 57.078 33.333 0.00 0.00 34.01 3.21
2983 7167 9.749340 TTCATATAGTAGCTTATACTAGGCACA 57.251 33.333 0.00 0.00 34.01 4.57
2985 7169 9.976776 ACTTCATATAGTAGCTTATACTAGGCA 57.023 33.333 0.00 0.00 34.01 4.75
2994 7178 9.967346 GTGTCATTGACTTCATATAGTAGCTTA 57.033 33.333 17.26 0.00 33.15 3.09
2995 7179 8.700051 AGTGTCATTGACTTCATATAGTAGCTT 58.300 33.333 17.26 0.00 33.15 3.74
2996 7180 8.140628 CAGTGTCATTGACTTCATATAGTAGCT 58.859 37.037 17.26 0.00 33.15 3.32
2997 7181 8.138074 TCAGTGTCATTGACTTCATATAGTAGC 58.862 37.037 17.26 0.00 33.15 3.58
2998 7182 9.457110 GTCAGTGTCATTGACTTCATATAGTAG 57.543 37.037 18.48 0.00 41.29 2.57
2999 7183 8.966868 TGTCAGTGTCATTGACTTCATATAGTA 58.033 33.333 23.98 2.76 44.08 1.82
3000 7184 7.840931 TGTCAGTGTCATTGACTTCATATAGT 58.159 34.615 23.98 0.00 44.08 2.12
3001 7185 7.042858 GCTGTCAGTGTCATTGACTTCATATAG 60.043 40.741 23.98 14.52 44.08 1.31
3002 7186 6.758416 GCTGTCAGTGTCATTGACTTCATATA 59.242 38.462 23.98 6.24 44.08 0.86
3003 7187 5.583854 GCTGTCAGTGTCATTGACTTCATAT 59.416 40.000 23.98 0.00 44.08 1.78
3004 7188 4.931601 GCTGTCAGTGTCATTGACTTCATA 59.068 41.667 23.98 7.43 44.08 2.15
3005 7189 3.750130 GCTGTCAGTGTCATTGACTTCAT 59.250 43.478 23.98 0.00 44.08 2.57
3006 7190 3.133691 GCTGTCAGTGTCATTGACTTCA 58.866 45.455 23.98 8.09 44.08 3.02
3007 7191 3.186001 CAGCTGTCAGTGTCATTGACTTC 59.814 47.826 23.98 16.70 44.08 3.01
3008 7192 3.136763 CAGCTGTCAGTGTCATTGACTT 58.863 45.455 23.98 10.89 44.08 3.01
3009 7193 2.549563 CCAGCTGTCAGTGTCATTGACT 60.550 50.000 23.98 6.49 44.08 3.41
3010 7194 1.802960 CCAGCTGTCAGTGTCATTGAC 59.197 52.381 18.82 18.82 44.03 3.18
3011 7195 1.693606 TCCAGCTGTCAGTGTCATTGA 59.306 47.619 13.81 0.00 0.00 2.57
3012 7196 2.174363 TCCAGCTGTCAGTGTCATTG 57.826 50.000 13.81 0.00 0.00 2.82
3013 7197 2.369860 TCTTCCAGCTGTCAGTGTCATT 59.630 45.455 13.81 0.00 0.00 2.57
3014 7198 1.973515 TCTTCCAGCTGTCAGTGTCAT 59.026 47.619 13.81 0.00 0.00 3.06
3015 7199 1.069204 GTCTTCCAGCTGTCAGTGTCA 59.931 52.381 13.81 0.00 0.00 3.58
3016 7200 1.069204 TGTCTTCCAGCTGTCAGTGTC 59.931 52.381 13.81 4.53 0.00 3.67
3017 7201 1.123077 TGTCTTCCAGCTGTCAGTGT 58.877 50.000 13.81 0.00 0.00 3.55
3018 7202 1.869767 GTTGTCTTCCAGCTGTCAGTG 59.130 52.381 13.81 0.00 0.00 3.66
3019 7203 1.539065 CGTTGTCTTCCAGCTGTCAGT 60.539 52.381 13.81 0.00 0.00 3.41
3020 7204 1.143305 CGTTGTCTTCCAGCTGTCAG 58.857 55.000 13.81 8.01 0.00 3.51
3021 7205 0.464036 ACGTTGTCTTCCAGCTGTCA 59.536 50.000 13.81 0.00 0.00 3.58
3022 7206 1.140816 GACGTTGTCTTCCAGCTGTC 58.859 55.000 13.81 0.00 0.00 3.51
3023 7207 0.464036 TGACGTTGTCTTCCAGCTGT 59.536 50.000 13.81 0.00 33.15 4.40
3024 7208 1.800805 ATGACGTTGTCTTCCAGCTG 58.199 50.000 6.78 6.78 33.15 4.24
3025 7209 2.224281 TGAATGACGTTGTCTTCCAGCT 60.224 45.455 0.00 0.00 33.15 4.24
3026 7210 2.143122 TGAATGACGTTGTCTTCCAGC 58.857 47.619 0.00 0.00 33.15 4.85
3027 7211 3.996363 TGATGAATGACGTTGTCTTCCAG 59.004 43.478 0.00 0.00 33.15 3.86
3028 7212 4.001618 TGATGAATGACGTTGTCTTCCA 57.998 40.909 0.00 0.00 33.15 3.53
3029 7213 6.479990 TCATATGATGAATGACGTTGTCTTCC 59.520 38.462 0.00 0.00 36.11 3.46
3030 7214 7.468922 TCATATGATGAATGACGTTGTCTTC 57.531 36.000 0.00 0.00 36.11 2.87
3063 7247 9.502091 TGCAAAGTACTTCTAGTCAACAATATT 57.498 29.630 8.95 0.00 0.00 1.28
3064 7248 9.502091 TTGCAAAGTACTTCTAGTCAACAATAT 57.498 29.630 8.95 0.00 0.00 1.28
3065 7249 8.896320 TTGCAAAGTACTTCTAGTCAACAATA 57.104 30.769 8.95 0.00 0.00 1.90
3066 7250 7.715249 TCTTGCAAAGTACTTCTAGTCAACAAT 59.285 33.333 8.95 0.00 46.34 2.71
3067 7251 7.045416 TCTTGCAAAGTACTTCTAGTCAACAA 58.955 34.615 8.95 4.46 46.34 2.83
3068 7252 6.578944 TCTTGCAAAGTACTTCTAGTCAACA 58.421 36.000 8.95 0.00 46.34 3.33
3069 7253 7.659652 ATCTTGCAAAGTACTTCTAGTCAAC 57.340 36.000 8.95 0.00 46.34 3.18
3070 7254 9.944376 ATTATCTTGCAAAGTACTTCTAGTCAA 57.056 29.630 8.95 7.89 46.34 3.18
3113 7297 5.476091 TCTTGTTGACACAAACCCTTTTT 57.524 34.783 0.00 0.00 42.53 1.94
3114 7298 5.476091 TTCTTGTTGACACAAACCCTTTT 57.524 34.783 0.00 0.00 42.53 2.27
3115 7299 5.011635 ACTTTCTTGTTGACACAAACCCTTT 59.988 36.000 0.00 0.00 42.53 3.11
3116 7300 4.526650 ACTTTCTTGTTGACACAAACCCTT 59.473 37.500 0.00 0.00 42.53 3.95
3117 7301 4.086457 ACTTTCTTGTTGACACAAACCCT 58.914 39.130 0.00 0.00 42.53 4.34
3118 7302 4.450082 ACTTTCTTGTTGACACAAACCC 57.550 40.909 0.00 0.00 42.53 4.11
3119 7303 8.379902 CAAATAACTTTCTTGTTGACACAAACC 58.620 33.333 0.00 0.00 42.53 3.27
3120 7304 8.921670 ACAAATAACTTTCTTGTTGACACAAAC 58.078 29.630 0.00 0.00 42.53 2.93
3121 7305 9.134734 GACAAATAACTTTCTTGTTGACACAAA 57.865 29.630 0.00 0.00 42.53 2.83
3122 7306 7.757624 GGACAAATAACTTTCTTGTTGACACAA 59.242 33.333 0.00 0.00 40.82 3.33
3123 7307 7.254852 GGACAAATAACTTTCTTGTTGACACA 58.745 34.615 0.00 0.00 33.53 3.72
3124 7308 6.695713 GGGACAAATAACTTTCTTGTTGACAC 59.304 38.462 0.00 0.00 33.53 3.67
3125 7309 6.605594 AGGGACAAATAACTTTCTTGTTGACA 59.394 34.615 0.00 0.00 33.53 3.58
3126 7310 7.039313 AGGGACAAATAACTTTCTTGTTGAC 57.961 36.000 0.00 0.00 33.53 3.18
3127 7311 7.447238 CCTAGGGACAAATAACTTTCTTGTTGA 59.553 37.037 0.00 0.00 33.53 3.18
3128 7312 7.593825 CCTAGGGACAAATAACTTTCTTGTTG 58.406 38.462 0.00 0.00 33.53 3.33
3129 7313 6.208797 GCCTAGGGACAAATAACTTTCTTGTT 59.791 38.462 11.72 0.00 33.53 2.83
3130 7314 5.710567 GCCTAGGGACAAATAACTTTCTTGT 59.289 40.000 11.72 0.00 36.02 3.16
3131 7315 5.710099 TGCCTAGGGACAAATAACTTTCTTG 59.290 40.000 11.72 0.00 0.00 3.02
3132 7316 5.887754 TGCCTAGGGACAAATAACTTTCTT 58.112 37.500 11.72 0.00 0.00 2.52
3133 7317 5.514500 TGCCTAGGGACAAATAACTTTCT 57.486 39.130 11.72 0.00 0.00 2.52
3134 7318 6.458342 CGATTGCCTAGGGACAAATAACTTTC 60.458 42.308 11.72 0.00 0.00 2.62
3135 7319 5.357032 CGATTGCCTAGGGACAAATAACTTT 59.643 40.000 11.72 0.00 0.00 2.66
3136 7320 4.881850 CGATTGCCTAGGGACAAATAACTT 59.118 41.667 11.72 0.00 0.00 2.66
3137 7321 4.451900 CGATTGCCTAGGGACAAATAACT 58.548 43.478 11.72 0.00 0.00 2.24
3138 7322 3.564225 CCGATTGCCTAGGGACAAATAAC 59.436 47.826 11.72 0.00 0.00 1.89
3139 7323 3.201266 ACCGATTGCCTAGGGACAAATAA 59.799 43.478 11.72 0.00 0.00 1.40
3140 7324 2.775384 ACCGATTGCCTAGGGACAAATA 59.225 45.455 11.72 0.00 0.00 1.40
3141 7325 1.564348 ACCGATTGCCTAGGGACAAAT 59.436 47.619 11.72 0.00 0.00 2.32
3142 7326 0.988832 ACCGATTGCCTAGGGACAAA 59.011 50.000 11.72 0.00 0.00 2.83
3143 7327 1.868713 TACCGATTGCCTAGGGACAA 58.131 50.000 11.72 7.62 0.00 3.18
3144 7328 1.483415 GTTACCGATTGCCTAGGGACA 59.517 52.381 11.72 0.00 0.00 4.02
3145 7329 1.483415 TGTTACCGATTGCCTAGGGAC 59.517 52.381 11.72 0.00 0.00 4.46
3146 7330 1.868713 TGTTACCGATTGCCTAGGGA 58.131 50.000 11.72 4.36 0.00 4.20
3147 7331 2.093128 ACTTGTTACCGATTGCCTAGGG 60.093 50.000 11.72 0.00 0.00 3.53
3148 7332 3.261981 ACTTGTTACCGATTGCCTAGG 57.738 47.619 3.67 3.67 0.00 3.02
3149 7333 4.117685 GGTACTTGTTACCGATTGCCTAG 58.882 47.826 0.00 0.00 41.21 3.02
3150 7334 4.127566 GGTACTTGTTACCGATTGCCTA 57.872 45.455 0.00 0.00 41.21 3.93
3151 7335 2.981898 GGTACTTGTTACCGATTGCCT 58.018 47.619 0.00 0.00 41.21 4.75
3159 7343 6.343703 AGAATGATTACCGGTACTTGTTACC 58.656 40.000 15.53 0.00 46.46 2.85
3160 7344 7.332678 ACAAGAATGATTACCGGTACTTGTTAC 59.667 37.037 27.53 13.72 42.12 2.50
3161 7345 7.388437 ACAAGAATGATTACCGGTACTTGTTA 58.612 34.615 27.53 11.06 42.12 2.41
3162 7346 6.235664 ACAAGAATGATTACCGGTACTTGTT 58.764 36.000 27.53 16.67 42.12 2.83
3163 7347 5.801380 ACAAGAATGATTACCGGTACTTGT 58.199 37.500 27.53 27.53 40.74 3.16
3164 7348 7.837202 TTACAAGAATGATTACCGGTACTTG 57.163 36.000 26.58 26.58 39.17 3.16
3165 7349 9.106070 GAATTACAAGAATGATTACCGGTACTT 57.894 33.333 15.53 10.41 0.00 2.24
3166 7350 8.483758 AGAATTACAAGAATGATTACCGGTACT 58.516 33.333 15.53 9.47 0.00 2.73
3167 7351 8.658499 AGAATTACAAGAATGATTACCGGTAC 57.342 34.615 15.53 4.32 0.00 3.34
3180 7364 9.094578 CCTCTCCCTCATATAGAATTACAAGAA 57.905 37.037 0.00 0.00 0.00 2.52
3181 7365 7.179338 GCCTCTCCCTCATATAGAATTACAAGA 59.821 40.741 0.00 0.00 0.00 3.02
3182 7366 7.038729 TGCCTCTCCCTCATATAGAATTACAAG 60.039 40.741 0.00 0.00 0.00 3.16
3183 7367 6.787458 TGCCTCTCCCTCATATAGAATTACAA 59.213 38.462 0.00 0.00 0.00 2.41
3184 7368 6.322931 TGCCTCTCCCTCATATAGAATTACA 58.677 40.000 0.00 0.00 0.00 2.41
3185 7369 6.859112 TGCCTCTCCCTCATATAGAATTAC 57.141 41.667 0.00 0.00 0.00 1.89
3186 7370 9.152327 CATATGCCTCTCCCTCATATAGAATTA 57.848 37.037 0.00 0.00 33.17 1.40
3187 7371 7.848361 TCATATGCCTCTCCCTCATATAGAATT 59.152 37.037 0.00 0.00 33.17 2.17
3188 7372 7.368631 TCATATGCCTCTCCCTCATATAGAAT 58.631 38.462 0.00 0.00 33.17 2.40
3189 7373 6.745857 TCATATGCCTCTCCCTCATATAGAA 58.254 40.000 0.00 0.00 33.17 2.10
3190 7374 6.347061 TCATATGCCTCTCCCTCATATAGA 57.653 41.667 0.00 0.00 33.17 1.98
3191 7375 5.010922 GCTCATATGCCTCTCCCTCATATAG 59.989 48.000 0.00 0.00 33.17 1.31
3192 7376 4.898265 GCTCATATGCCTCTCCCTCATATA 59.102 45.833 0.00 0.00 33.17 0.86
3193 7377 3.710677 GCTCATATGCCTCTCCCTCATAT 59.289 47.826 0.00 0.00 34.70 1.78
3194 7378 3.102972 GCTCATATGCCTCTCCCTCATA 58.897 50.000 0.00 0.00 0.00 2.15
3195 7379 1.907936 GCTCATATGCCTCTCCCTCAT 59.092 52.381 0.00 0.00 0.00 2.90
3196 7380 1.132913 AGCTCATATGCCTCTCCCTCA 60.133 52.381 0.00 0.00 0.00 3.86
3197 7381 1.643310 AGCTCATATGCCTCTCCCTC 58.357 55.000 0.00 0.00 0.00 4.30
3198 7382 2.903135 GTTAGCTCATATGCCTCTCCCT 59.097 50.000 0.00 0.00 0.00 4.20
3199 7383 2.634940 TGTTAGCTCATATGCCTCTCCC 59.365 50.000 0.00 0.00 0.00 4.30
3200 7384 4.550076 ATGTTAGCTCATATGCCTCTCC 57.450 45.455 0.00 0.00 0.00 3.71
3201 7385 6.279513 AGTATGTTAGCTCATATGCCTCTC 57.720 41.667 0.00 0.00 33.68 3.20
3202 7386 6.678568 AAGTATGTTAGCTCATATGCCTCT 57.321 37.500 0.00 0.00 33.68 3.69
3203 7387 7.158021 AGAAAGTATGTTAGCTCATATGCCTC 58.842 38.462 0.00 0.00 33.68 4.70
3204 7388 7.016072 AGAGAAAGTATGTTAGCTCATATGCCT 59.984 37.037 0.00 0.00 33.68 4.75
3205 7389 7.158021 AGAGAAAGTATGTTAGCTCATATGCC 58.842 38.462 0.00 0.00 33.68 4.40
3206 7390 9.134734 GTAGAGAAAGTATGTTAGCTCATATGC 57.865 37.037 0.00 0.00 33.68 3.14
3210 7394 8.200792 CCAAGTAGAGAAAGTATGTTAGCTCAT 58.799 37.037 0.00 0.00 0.00 2.90
3211 7395 7.396339 TCCAAGTAGAGAAAGTATGTTAGCTCA 59.604 37.037 0.00 0.00 0.00 4.26
3212 7396 7.773149 TCCAAGTAGAGAAAGTATGTTAGCTC 58.227 38.462 0.00 0.00 0.00 4.09
3213 7397 7.719871 TCCAAGTAGAGAAAGTATGTTAGCT 57.280 36.000 0.00 0.00 0.00 3.32
3214 7398 8.198109 TGATCCAAGTAGAGAAAGTATGTTAGC 58.802 37.037 0.00 0.00 0.00 3.09
3219 7403 9.149225 GCATATGATCCAAGTAGAGAAAGTATG 57.851 37.037 6.97 0.00 0.00 2.39
3220 7404 8.874156 TGCATATGATCCAAGTAGAGAAAGTAT 58.126 33.333 6.97 0.00 0.00 2.12
3221 7405 8.144478 GTGCATATGATCCAAGTAGAGAAAGTA 58.856 37.037 6.97 0.00 0.00 2.24
3222 7406 6.989169 GTGCATATGATCCAAGTAGAGAAAGT 59.011 38.462 6.97 0.00 0.00 2.66
3223 7407 7.215789 AGTGCATATGATCCAAGTAGAGAAAG 58.784 38.462 6.97 0.00 0.00 2.62
3224 7408 7.129457 AGTGCATATGATCCAAGTAGAGAAA 57.871 36.000 6.97 0.00 0.00 2.52
3225 7409 6.737720 AGTGCATATGATCCAAGTAGAGAA 57.262 37.500 6.97 0.00 0.00 2.87
3226 7410 6.737720 AAGTGCATATGATCCAAGTAGAGA 57.262 37.500 6.97 0.00 0.00 3.10
3227 7411 8.309656 TCATAAGTGCATATGATCCAAGTAGAG 58.690 37.037 6.97 0.00 37.37 2.43
3228 7412 8.193953 TCATAAGTGCATATGATCCAAGTAGA 57.806 34.615 6.97 0.00 37.37 2.59
3229 7413 9.445878 AATCATAAGTGCATATGATCCAAGTAG 57.554 33.333 18.64 0.00 47.00 2.57
3230 7414 9.223099 CAATCATAAGTGCATATGATCCAAGTA 57.777 33.333 18.64 0.00 47.00 2.24
3231 7415 7.176165 CCAATCATAAGTGCATATGATCCAAGT 59.824 37.037 18.64 5.00 47.00 3.16
3232 7416 7.392393 TCCAATCATAAGTGCATATGATCCAAG 59.608 37.037 18.64 11.38 47.00 3.61
3233 7417 7.175467 GTCCAATCATAAGTGCATATGATCCAA 59.825 37.037 18.64 8.11 47.00 3.53
3234 7418 6.656270 GTCCAATCATAAGTGCATATGATCCA 59.344 38.462 18.64 7.21 47.00 3.41
3235 7419 6.094603 GGTCCAATCATAAGTGCATATGATCC 59.905 42.308 18.64 13.35 47.00 3.36
3236 7420 6.094603 GGGTCCAATCATAAGTGCATATGATC 59.905 42.308 18.64 9.45 47.00 2.92
3238 7422 5.316167 GGGTCCAATCATAAGTGCATATGA 58.684 41.667 11.45 11.45 44.16 2.15
3239 7423 4.460382 GGGGTCCAATCATAAGTGCATATG 59.540 45.833 0.00 0.00 35.11 1.78
3240 7424 4.354987 AGGGGTCCAATCATAAGTGCATAT 59.645 41.667 0.00 0.00 0.00 1.78
3241 7425 3.721575 AGGGGTCCAATCATAAGTGCATA 59.278 43.478 0.00 0.00 0.00 3.14
3242 7426 2.515429 AGGGGTCCAATCATAAGTGCAT 59.485 45.455 0.00 0.00 0.00 3.96
3243 7427 1.922447 AGGGGTCCAATCATAAGTGCA 59.078 47.619 0.00 0.00 0.00 4.57
3244 7428 2.736670 AGGGGTCCAATCATAAGTGC 57.263 50.000 0.00 0.00 0.00 4.40
3245 7429 3.136443 TGCTAGGGGTCCAATCATAAGTG 59.864 47.826 0.00 0.00 0.00 3.16
3246 7430 3.393687 TGCTAGGGGTCCAATCATAAGT 58.606 45.455 0.00 0.00 0.00 2.24
3247 7431 4.392940 CTTGCTAGGGGTCCAATCATAAG 58.607 47.826 0.00 0.00 0.00 1.73
3248 7432 3.435026 GCTTGCTAGGGGTCCAATCATAA 60.435 47.826 0.00 0.00 0.00 1.90
3249 7433 2.106511 GCTTGCTAGGGGTCCAATCATA 59.893 50.000 0.00 0.00 0.00 2.15
3250 7434 1.133668 GCTTGCTAGGGGTCCAATCAT 60.134 52.381 0.00 0.00 0.00 2.45
3251 7435 0.255890 GCTTGCTAGGGGTCCAATCA 59.744 55.000 0.00 0.00 0.00 2.57
3252 7436 0.255890 TGCTTGCTAGGGGTCCAATC 59.744 55.000 0.00 0.00 0.00 2.67
3253 7437 0.929244 ATGCTTGCTAGGGGTCCAAT 59.071 50.000 0.00 0.00 0.00 3.16
3254 7438 0.255890 GATGCTTGCTAGGGGTCCAA 59.744 55.000 0.00 0.00 0.00 3.53
3255 7439 1.635817 GGATGCTTGCTAGGGGTCCA 61.636 60.000 0.00 0.00 0.00 4.02
3256 7440 1.149401 GGATGCTTGCTAGGGGTCC 59.851 63.158 0.00 0.00 0.00 4.46
3257 7441 0.464554 GTGGATGCTTGCTAGGGGTC 60.465 60.000 0.00 0.00 0.00 4.46
3258 7442 1.207488 TGTGGATGCTTGCTAGGGGT 61.207 55.000 0.00 0.00 0.00 4.95
3259 7443 0.034186 TTGTGGATGCTTGCTAGGGG 60.034 55.000 0.00 0.00 0.00 4.79
3260 7444 1.098050 GTTGTGGATGCTTGCTAGGG 58.902 55.000 0.00 0.00 0.00 3.53
3261 7445 2.119801 AGTTGTGGATGCTTGCTAGG 57.880 50.000 0.00 0.00 0.00 3.02
3262 7446 3.866651 AGTAGTTGTGGATGCTTGCTAG 58.133 45.455 0.00 0.00 0.00 3.42
3263 7447 3.981071 AGTAGTTGTGGATGCTTGCTA 57.019 42.857 0.00 0.00 0.00 3.49
3264 7448 2.867109 AGTAGTTGTGGATGCTTGCT 57.133 45.000 0.00 0.00 0.00 3.91
3265 7449 4.695455 TCTTTAGTAGTTGTGGATGCTTGC 59.305 41.667 0.00 0.00 0.00 4.01
3266 7450 6.595326 TGATCTTTAGTAGTTGTGGATGCTTG 59.405 38.462 0.00 0.00 0.00 4.01
3267 7451 6.711277 TGATCTTTAGTAGTTGTGGATGCTT 58.289 36.000 0.00 0.00 0.00 3.91
3268 7452 6.299805 TGATCTTTAGTAGTTGTGGATGCT 57.700 37.500 0.00 0.00 0.00 3.79
3269 7453 7.559590 AATGATCTTTAGTAGTTGTGGATGC 57.440 36.000 0.00 0.00 0.00 3.91
3271 7455 9.838339 CCTTAATGATCTTTAGTAGTTGTGGAT 57.162 33.333 0.00 0.00 0.00 3.41
3272 7456 8.822805 ACCTTAATGATCTTTAGTAGTTGTGGA 58.177 33.333 0.00 0.00 0.00 4.02
3273 7457 9.099454 GACCTTAATGATCTTTAGTAGTTGTGG 57.901 37.037 0.00 0.00 0.00 4.17
3274 7458 9.653287 TGACCTTAATGATCTTTAGTAGTTGTG 57.347 33.333 0.00 0.00 0.00 3.33
3281 7465 9.178758 GGTTTCATGACCTTAATGATCTTTAGT 57.821 33.333 0.00 0.00 36.73 2.24
3282 7466 8.624776 GGGTTTCATGACCTTAATGATCTTTAG 58.375 37.037 0.00 0.00 39.71 1.85
3283 7467 8.112822 TGGGTTTCATGACCTTAATGATCTTTA 58.887 33.333 0.00 0.00 39.71 1.85
3284 7468 6.953520 TGGGTTTCATGACCTTAATGATCTTT 59.046 34.615 0.00 0.00 39.71 2.52
3285 7469 6.493166 TGGGTTTCATGACCTTAATGATCTT 58.507 36.000 0.00 0.00 39.71 2.40
3286 7470 6.078456 TGGGTTTCATGACCTTAATGATCT 57.922 37.500 0.00 0.00 39.71 2.75
3287 7471 6.405842 GGTTGGGTTTCATGACCTTAATGATC 60.406 42.308 0.00 0.00 39.71 2.92
3288 7472 5.422012 GGTTGGGTTTCATGACCTTAATGAT 59.578 40.000 0.00 0.00 39.71 2.45
3289 7473 4.770010 GGTTGGGTTTCATGACCTTAATGA 59.230 41.667 0.00 0.00 39.71 2.57
3290 7474 4.526262 TGGTTGGGTTTCATGACCTTAATG 59.474 41.667 0.00 0.00 39.71 1.90
3291 7475 4.746466 TGGTTGGGTTTCATGACCTTAAT 58.254 39.130 0.00 0.00 39.71 1.40
3292 7476 4.186077 TGGTTGGGTTTCATGACCTTAA 57.814 40.909 0.00 0.00 39.71 1.85
3293 7477 3.885976 TGGTTGGGTTTCATGACCTTA 57.114 42.857 0.00 0.00 39.71 2.69
3294 7478 2.765689 TGGTTGGGTTTCATGACCTT 57.234 45.000 0.00 0.00 39.71 3.50
3295 7479 2.999185 ATGGTTGGGTTTCATGACCT 57.001 45.000 0.00 0.00 39.71 3.85
3296 7480 2.427095 GCTATGGTTGGGTTTCATGACC 59.573 50.000 0.00 0.00 39.04 4.02
3297 7481 3.088532 TGCTATGGTTGGGTTTCATGAC 58.911 45.455 0.00 0.00 0.00 3.06
3298 7482 3.448093 TGCTATGGTTGGGTTTCATGA 57.552 42.857 0.00 0.00 0.00 3.07
3299 7483 4.741321 AATGCTATGGTTGGGTTTCATG 57.259 40.909 0.00 0.00 0.00 3.07
3300 7484 5.957774 ACTTAATGCTATGGTTGGGTTTCAT 59.042 36.000 0.00 0.00 0.00 2.57
3301 7485 5.329399 ACTTAATGCTATGGTTGGGTTTCA 58.671 37.500 0.00 0.00 0.00 2.69
3302 7486 5.914898 ACTTAATGCTATGGTTGGGTTTC 57.085 39.130 0.00 0.00 0.00 2.78
3303 7487 7.122715 TGATACTTAATGCTATGGTTGGGTTT 58.877 34.615 0.00 0.00 0.00 3.27
3304 7488 6.668645 TGATACTTAATGCTATGGTTGGGTT 58.331 36.000 0.00 0.00 0.00 4.11
3305 7489 6.260700 TGATACTTAATGCTATGGTTGGGT 57.739 37.500 0.00 0.00 0.00 4.51
3306 7490 7.765695 ATTGATACTTAATGCTATGGTTGGG 57.234 36.000 0.00 0.00 0.00 4.12
3307 7491 8.299570 GGAATTGATACTTAATGCTATGGTTGG 58.700 37.037 0.00 0.00 0.00 3.77
3308 7492 9.071276 AGGAATTGATACTTAATGCTATGGTTG 57.929 33.333 0.00 0.00 0.00 3.77
3309 7493 9.289782 GAGGAATTGATACTTAATGCTATGGTT 57.710 33.333 0.00 0.00 0.00 3.67
3310 7494 8.664079 AGAGGAATTGATACTTAATGCTATGGT 58.336 33.333 0.00 0.00 0.00 3.55
3311 7495 9.512588 AAGAGGAATTGATACTTAATGCTATGG 57.487 33.333 0.00 0.00 0.00 2.74
3319 7503 9.053472 TGGGAGTAAAGAGGAATTGATACTTAA 57.947 33.333 0.00 0.00 0.00 1.85
3320 7504 8.618240 TGGGAGTAAAGAGGAATTGATACTTA 57.382 34.615 0.00 0.00 0.00 2.24
3321 7505 7.510675 TGGGAGTAAAGAGGAATTGATACTT 57.489 36.000 0.00 0.00 0.00 2.24
3322 7506 7.698163 ATGGGAGTAAAGAGGAATTGATACT 57.302 36.000 0.00 0.00 0.00 2.12
3323 7507 8.097662 CCTATGGGAGTAAAGAGGAATTGATAC 58.902 40.741 0.00 0.00 33.58 2.24
3324 7508 7.256691 GCCTATGGGAGTAAAGAGGAATTGATA 60.257 40.741 0.00 0.00 33.58 2.15
3325 7509 6.466470 GCCTATGGGAGTAAAGAGGAATTGAT 60.466 42.308 0.00 0.00 33.58 2.57
3326 7510 5.163195 GCCTATGGGAGTAAAGAGGAATTGA 60.163 44.000 0.00 0.00 33.58 2.57
3327 7511 5.066593 GCCTATGGGAGTAAAGAGGAATTG 58.933 45.833 0.00 0.00 33.58 2.32
3328 7512 4.104897 GGCCTATGGGAGTAAAGAGGAATT 59.895 45.833 0.00 0.00 33.58 2.17
3329 7513 3.653352 GGCCTATGGGAGTAAAGAGGAAT 59.347 47.826 0.00 0.00 33.58 3.01
3330 7514 3.046374 GGCCTATGGGAGTAAAGAGGAA 58.954 50.000 0.00 0.00 33.58 3.36
3331 7515 2.022428 TGGCCTATGGGAGTAAAGAGGA 60.022 50.000 3.32 0.00 33.58 3.71
3332 7516 2.408565 TGGCCTATGGGAGTAAAGAGG 58.591 52.381 3.32 0.00 33.58 3.69
3333 7517 4.020128 GGTATGGCCTATGGGAGTAAAGAG 60.020 50.000 3.32 0.00 33.58 2.85
3334 7518 3.908103 GGTATGGCCTATGGGAGTAAAGA 59.092 47.826 3.32 0.00 33.58 2.52
3335 7519 3.009143 GGGTATGGCCTATGGGAGTAAAG 59.991 52.174 3.32 0.00 37.43 1.85
3336 7520 2.983898 GGGTATGGCCTATGGGAGTAAA 59.016 50.000 3.32 0.00 37.43 2.01
3337 7521 2.627933 GGGTATGGCCTATGGGAGTAA 58.372 52.381 3.32 0.00 37.43 2.24
3338 7522 1.203389 GGGGTATGGCCTATGGGAGTA 60.203 57.143 3.32 0.00 37.43 2.59
3339 7523 0.475828 GGGGTATGGCCTATGGGAGT 60.476 60.000 3.32 0.00 37.43 3.85
3340 7524 0.475632 TGGGGTATGGCCTATGGGAG 60.476 60.000 3.32 0.00 37.43 4.30
3341 7525 0.770557 GTGGGGTATGGCCTATGGGA 60.771 60.000 3.32 0.00 37.43 4.37
3342 7526 0.772124 AGTGGGGTATGGCCTATGGG 60.772 60.000 3.32 0.00 37.43 4.00
3343 7527 1.149101 AAGTGGGGTATGGCCTATGG 58.851 55.000 3.32 0.00 37.43 2.74
3344 7528 2.979678 AGTAAGTGGGGTATGGCCTATG 59.020 50.000 3.32 0.00 37.43 2.23
3345 7529 3.248888 GAGTAAGTGGGGTATGGCCTAT 58.751 50.000 3.32 0.00 37.43 2.57
3346 7530 2.686119 GAGTAAGTGGGGTATGGCCTA 58.314 52.381 3.32 0.00 37.43 3.93
3347 7531 1.508256 GAGTAAGTGGGGTATGGCCT 58.492 55.000 3.32 0.00 37.43 5.19
3348 7532 0.106149 CGAGTAAGTGGGGTATGGCC 59.894 60.000 0.00 0.00 0.00 5.36
3349 7533 0.106149 CCGAGTAAGTGGGGTATGGC 59.894 60.000 0.00 0.00 0.00 4.40
3350 7534 0.756903 CCCGAGTAAGTGGGGTATGG 59.243 60.000 0.00 0.00 42.05 2.74
3357 7541 1.002087 AGCTTCAACCCGAGTAAGTGG 59.998 52.381 0.00 0.00 0.00 4.00
3358 7542 2.457366 AGCTTCAACCCGAGTAAGTG 57.543 50.000 0.00 0.00 0.00 3.16
3359 7543 2.633481 AGAAGCTTCAACCCGAGTAAGT 59.367 45.455 27.57 0.00 0.00 2.24
3360 7544 2.996621 CAGAAGCTTCAACCCGAGTAAG 59.003 50.000 27.57 0.05 0.00 2.34
3361 7545 2.367567 ACAGAAGCTTCAACCCGAGTAA 59.632 45.455 27.57 0.00 0.00 2.24
3362 7546 1.968493 ACAGAAGCTTCAACCCGAGTA 59.032 47.619 27.57 0.00 0.00 2.59
3363 7547 0.759346 ACAGAAGCTTCAACCCGAGT 59.241 50.000 27.57 11.15 0.00 4.18
3364 7548 1.270305 TGACAGAAGCTTCAACCCGAG 60.270 52.381 27.57 10.57 0.00 4.63
3365 7549 0.756294 TGACAGAAGCTTCAACCCGA 59.244 50.000 27.57 4.20 0.00 5.14
3366 7550 0.868406 GTGACAGAAGCTTCAACCCG 59.132 55.000 27.57 12.63 0.00 5.28
3367 7551 2.147150 GAGTGACAGAAGCTTCAACCC 58.853 52.381 27.57 13.79 0.00 4.11
3368 7552 3.063485 GAGAGTGACAGAAGCTTCAACC 58.937 50.000 27.57 15.44 0.00 3.77
3369 7553 2.728839 CGAGAGTGACAGAAGCTTCAAC 59.271 50.000 27.57 18.44 0.00 3.18
3370 7554 2.864097 GCGAGAGTGACAGAAGCTTCAA 60.864 50.000 27.57 8.04 0.00 2.69
3371 7555 1.336332 GCGAGAGTGACAGAAGCTTCA 60.336 52.381 27.57 5.39 0.00 3.02
3372 7556 1.345410 GCGAGAGTGACAGAAGCTTC 58.655 55.000 19.11 19.11 0.00 3.86
3373 7557 3.505808 GCGAGAGTGACAGAAGCTT 57.494 52.632 0.00 0.00 0.00 3.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.