Multiple sequence alignment - TraesCS6D01G117200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G117200 chr6D 100.000 4100 0 0 1 4100 83125721 83121622 0.000000e+00 7572
1 TraesCS6D01G117200 chr6D 93.032 2741 167 6 937 3655 83540547 83543285 0.000000e+00 3982
2 TraesCS6D01G117200 chr6D 86.091 2200 281 19 940 3130 83057984 83055801 0.000000e+00 2344
3 TraesCS6D01G117200 chr6D 86.040 2106 277 15 1025 3123 83046834 83044739 0.000000e+00 2244
4 TraesCS6D01G117200 chr6D 91.681 1190 75 14 2478 3655 83105907 83104730 0.000000e+00 1628
5 TraesCS6D01G117200 chr6D 91.964 448 30 5 3656 4100 285798279 285797835 1.250000e-174 623
6 TraesCS6D01G117200 chr6D 91.160 181 11 3 3479 3655 84028491 84028670 1.470000e-59 241
7 TraesCS6D01G117200 chr6D 84.746 236 19 10 629 859 83827284 83827507 1.920000e-53 220
8 TraesCS6D01G117200 chr6D 84.255 235 19 11 631 859 83539934 83540156 3.210000e-51 213
9 TraesCS6D01G117200 chr6D 85.185 162 16 5 1 160 83827755 83827910 4.240000e-35 159
10 TraesCS6D01G117200 chr6B 95.399 3695 122 13 1 3655 158150800 158147114 0.000000e+00 5838
11 TraesCS6D01G117200 chr6B 93.277 2737 165 2 937 3654 159402015 159404751 0.000000e+00 4017
12 TraesCS6D01G117200 chr6B 85.621 2142 288 13 975 3110 158103905 158101778 0.000000e+00 2231
13 TraesCS6D01G117200 chr6B 89.634 164 12 4 2 160 159401858 159402021 1.930000e-48 204
14 TraesCS6D01G117200 chr6A 94.826 2764 127 9 897 3655 100185183 100182431 0.000000e+00 4298
15 TraesCS6D01G117200 chr6A 93.382 2720 151 6 937 3636 100802991 100805701 0.000000e+00 3999
16 TraesCS6D01G117200 chr6A 93.272 2720 155 9 937 3654 100760921 100763614 0.000000e+00 3984
17 TraesCS6D01G117200 chr6A 92.315 1015 50 12 2642 3654 100809263 100810251 0.000000e+00 1417
18 TraesCS6D01G117200 chr6A 93.904 853 34 7 1 839 100186033 100185185 0.000000e+00 1271
19 TraesCS6D01G117200 chr6A 89.933 447 36 9 3656 4100 188421228 188421667 5.950000e-158 568
20 TraesCS6D01G117200 chr6A 88.957 163 14 4 1 160 100760766 100760927 8.990000e-47 198
21 TraesCS6D01G117200 chr6A 79.762 252 20 12 629 851 100760288 100760537 1.970000e-33 154
22 TraesCS6D01G117200 chr6A 92.000 100 8 0 629 728 100802365 100802464 1.540000e-29 141
23 TraesCS6D01G117200 chr1D 94.421 466 5 10 3656 4100 95914899 95915364 0.000000e+00 697
24 TraesCS6D01G117200 chr1D 93.133 466 10 9 3656 4100 95882356 95882820 0.000000e+00 664
25 TraesCS6D01G117200 chr1D 91.480 446 34 4 3656 4100 103424311 103423869 9.740000e-171 610
26 TraesCS6D01G117200 chr5D 90.909 451 34 7 3653 4100 65083320 65082874 2.110000e-167 599
27 TraesCS6D01G117200 chr7D 90.157 447 39 5 3656 4100 597324636 597324193 9.880000e-161 577
28 TraesCS6D01G117200 chr2D 90.157 447 38 6 3656 4100 98825026 98824584 9.880000e-161 577
29 TraesCS6D01G117200 chr3D 89.778 450 40 5 3654 4100 94956500 94956054 4.600000e-159 571


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G117200 chr6D 83121622 83125721 4099 True 7572.000000 7572 100.000000 1 4100 1 chr6D.!!$R4 4099
1 TraesCS6D01G117200 chr6D 83055801 83057984 2183 True 2344.000000 2344 86.091000 940 3130 1 chr6D.!!$R2 2190
2 TraesCS6D01G117200 chr6D 83044739 83046834 2095 True 2244.000000 2244 86.040000 1025 3123 1 chr6D.!!$R1 2098
3 TraesCS6D01G117200 chr6D 83539934 83543285 3351 False 2097.500000 3982 88.643500 631 3655 2 chr6D.!!$F2 3024
4 TraesCS6D01G117200 chr6D 83104730 83105907 1177 True 1628.000000 1628 91.681000 2478 3655 1 chr6D.!!$R3 1177
5 TraesCS6D01G117200 chr6B 158147114 158150800 3686 True 5838.000000 5838 95.399000 1 3655 1 chr6B.!!$R2 3654
6 TraesCS6D01G117200 chr6B 158101778 158103905 2127 True 2231.000000 2231 85.621000 975 3110 1 chr6B.!!$R1 2135
7 TraesCS6D01G117200 chr6B 159401858 159404751 2893 False 2110.500000 4017 91.455500 2 3654 2 chr6B.!!$F1 3652
8 TraesCS6D01G117200 chr6A 100182431 100186033 3602 True 2784.500000 4298 94.365000 1 3655 2 chr6A.!!$R1 3654
9 TraesCS6D01G117200 chr6A 100802365 100810251 7886 False 1852.333333 3999 92.565667 629 3654 3 chr6A.!!$F3 3025
10 TraesCS6D01G117200 chr6A 100760288 100763614 3326 False 1445.333333 3984 87.330333 1 3654 3 chr6A.!!$F2 3653

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 348 0.461548 TGCACCGAGCTGGAGAATAG 59.538 55.0 8.91 0.0 45.94 1.73 F
393 407 0.534412 CAGCCTCACGAGAATCCAGT 59.466 55.0 0.00 0.0 0.00 4.00 F
1296 1729 0.761323 TCAACCTGTCCCGGAACTCA 60.761 55.0 0.73 0.0 0.00 3.41 F
2282 2716 0.107312 ATGCCAGAGGATGTCAGCAC 60.107 55.0 0.00 0.0 38.95 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1393 1826 1.091771 CGCGCAGGGATTGAAGATGT 61.092 55.0 8.75 0.0 46.37 3.06 R
1558 1991 1.174712 AGCACAGCAAAAGATGGCGT 61.175 50.0 0.00 0.0 34.54 5.68 R
2748 3185 0.322975 AGTCGAGCATCTGCAGGTTT 59.677 50.0 15.13 0.0 45.16 3.27 R
3706 8709 0.037697 AGCACACGATTAGTCCGCAA 60.038 50.0 0.00 0.0 31.34 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 37 9.801873 ACCGAAAATTCCAACAGAAAATATATG 57.198 29.630 0.00 0.00 38.21 1.78
36 38 9.248291 CCGAAAATTCCAACAGAAAATATATGG 57.752 33.333 0.00 0.00 38.21 2.74
102 104 3.627577 AGGAAATGGCAGTTTAGTATGCG 59.372 43.478 0.19 0.00 43.49 4.73
168 171 1.593209 GGACAGTTCCGTTCGCACA 60.593 57.895 0.00 0.00 29.98 4.57
183 186 4.316205 TCGCACACTCTTTCTTCACTAA 57.684 40.909 0.00 0.00 0.00 2.24
204 207 1.134340 ACCGTTGCTAGTTTCACCACA 60.134 47.619 0.00 0.00 0.00 4.17
258 270 7.748847 AGTACACTAAGAATTTTAACATGCCG 58.251 34.615 0.00 0.00 0.00 5.69
280 292 2.040278 TCATTTAGCTTGGCTCTGGTGT 59.960 45.455 0.00 0.00 40.44 4.16
290 302 0.888285 GCTCTGGTGTTGCTGCTCTT 60.888 55.000 0.00 0.00 0.00 2.85
315 327 1.153667 CTCTCCGACAAGCTCCTGC 60.154 63.158 0.00 0.00 40.05 4.85
316 328 2.125350 CTCCGACAAGCTCCTGCC 60.125 66.667 0.00 0.00 40.80 4.85
317 329 2.604686 TCCGACAAGCTCCTGCCT 60.605 61.111 0.00 0.00 40.80 4.75
318 330 2.435586 CCGACAAGCTCCTGCCTG 60.436 66.667 0.00 0.00 40.80 4.85
334 346 1.220206 CTGCACCGAGCTGGAGAAT 59.780 57.895 8.91 0.00 45.94 2.40
336 348 0.461548 TGCACCGAGCTGGAGAATAG 59.538 55.000 8.91 0.00 45.94 1.73
375 389 3.531207 CGCTCTCTCGGGATGGCA 61.531 66.667 9.69 0.00 0.00 4.92
393 407 0.534412 CAGCCTCACGAGAATCCAGT 59.466 55.000 0.00 0.00 0.00 4.00
498 516 5.650283 TCTTATTCCATGTCCAAAGGGTTT 58.350 37.500 0.00 0.00 34.93 3.27
859 915 2.149578 GCAAGATGCATCCGATTAGCT 58.850 47.619 23.06 0.00 44.26 3.32
985 1414 7.113404 GCCATTATATTTCATACAACAAGCACG 59.887 37.037 0.00 0.00 0.00 5.34
998 1431 3.638484 ACAAGCACGCCAAGAATTTTAC 58.362 40.909 0.00 0.00 0.00 2.01
1098 1531 1.271127 GCTCCCTTCTCCAGCTCCTT 61.271 60.000 0.00 0.00 0.00 3.36
1296 1729 0.761323 TCAACCTGTCCCGGAACTCA 60.761 55.000 0.73 0.00 0.00 3.41
1393 1826 3.005539 GAGGCCTGGGTGAGCTGA 61.006 66.667 12.00 0.00 0.00 4.26
1403 1836 2.306805 TGGGTGAGCTGACATCTTCAAT 59.693 45.455 5.47 0.00 32.21 2.57
1558 1991 2.073056 CAACTACGCCATGTGTTAGCA 58.927 47.619 0.00 0.00 0.00 3.49
1703 2137 3.988976 TCCAGATGAACTCTTCAAGGG 57.011 47.619 0.00 0.00 43.95 3.95
2133 2567 6.803807 GTCAATTGTCAGAAGAAATAGGCAAC 59.196 38.462 5.13 0.00 0.00 4.17
2168 2602 9.950496 CCTGTTATTCCTATCACTTGCTAATAT 57.050 33.333 0.00 0.00 0.00 1.28
2282 2716 0.107312 ATGCCAGAGGATGTCAGCAC 60.107 55.000 0.00 0.00 38.95 4.40
2283 2717 1.297689 GCCAGAGGATGTCAGCACA 59.702 57.895 0.00 0.00 36.78 4.57
2502 2936 4.225042 GGGGAAATTCCAAGTGCCTTAATT 59.775 41.667 14.68 0.00 38.64 1.40
2660 3097 1.961277 CTGGTATGATTCCGGCGGC 60.961 63.158 23.83 8.26 0.00 6.53
2748 3185 4.548451 AGAACAGATCTGCAATCTCACA 57.452 40.909 22.83 0.00 36.88 3.58
2810 3247 3.314635 GGTAAGATTCCAGCTGCATTGAG 59.685 47.826 8.66 0.00 0.00 3.02
2921 3359 3.586470 TTCTAGCTTTGGTGGAAACCA 57.414 42.857 0.00 0.00 38.14 3.67
3120 3558 4.932268 AAACCATGTAACCGTTATCACG 57.068 40.909 0.00 0.00 46.71 4.35
3139 3577 4.393680 TCACGGCTCACAAATGGTTAATAC 59.606 41.667 0.00 0.00 0.00 1.89
3222 3660 0.846693 AGGGAAAGCACACAAGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
3284 3725 0.615331 TTTGTAGCCTCTCCTGCCTG 59.385 55.000 0.00 0.00 0.00 4.85
3294 3735 1.632409 TCTCCTGCCTGAAGCTGATTT 59.368 47.619 0.00 0.00 42.76 2.17
3437 3897 5.705441 CCATGTGTAAAGAGCTAACCAGAAA 59.295 40.000 0.00 0.00 0.00 2.52
3655 8658 9.981460 AGAATTATTTTTACTGATTCTCCCACT 57.019 29.630 0.00 0.00 33.11 4.00
3657 8660 9.533831 AATTATTTTTACTGATTCTCCCACTGT 57.466 29.630 0.00 0.00 0.00 3.55
3660 8663 7.979444 TTTTTACTGATTCTCCCACTGTAAG 57.021 36.000 0.00 0.00 42.29 2.34
3661 8664 5.677319 TTACTGATTCTCCCACTGTAAGG 57.323 43.478 0.00 0.00 39.30 2.69
3663 8666 1.559682 TGATTCTCCCACTGTAAGGGC 59.440 52.381 0.00 0.00 46.36 5.19
3664 8667 1.559682 GATTCTCCCACTGTAAGGGCA 59.440 52.381 0.00 0.00 46.36 5.36
3665 8668 1.668826 TTCTCCCACTGTAAGGGCAT 58.331 50.000 0.00 0.00 46.36 4.40
3666 8669 2.561209 TCTCCCACTGTAAGGGCATA 57.439 50.000 0.00 0.00 46.36 3.14
3667 8670 3.060479 TCTCCCACTGTAAGGGCATAT 57.940 47.619 0.00 0.00 46.36 1.78
3668 8671 3.393687 TCTCCCACTGTAAGGGCATATT 58.606 45.455 0.00 0.00 46.36 1.28
3669 8672 3.785887 TCTCCCACTGTAAGGGCATATTT 59.214 43.478 0.00 0.00 46.36 1.40
3670 8673 4.972568 TCTCCCACTGTAAGGGCATATTTA 59.027 41.667 0.00 0.00 46.36 1.40
3671 8674 5.610982 TCTCCCACTGTAAGGGCATATTTAT 59.389 40.000 0.00 0.00 46.36 1.40
3672 8675 5.876357 TCCCACTGTAAGGGCATATTTATC 58.124 41.667 0.00 0.00 46.36 1.75
3673 8676 5.010282 CCCACTGTAAGGGCATATTTATCC 58.990 45.833 0.00 0.00 39.96 2.59
3674 8677 5.010282 CCACTGTAAGGGCATATTTATCCC 58.990 45.833 0.00 0.00 34.45 3.85
3684 8687 7.597288 GGGCATATTTATCCCTAAAGTGTTT 57.403 36.000 0.00 0.00 37.08 2.83
3685 8688 8.018537 GGGCATATTTATCCCTAAAGTGTTTT 57.981 34.615 0.00 0.00 37.08 2.43
3686 8689 7.926018 GGGCATATTTATCCCTAAAGTGTTTTG 59.074 37.037 0.00 0.00 37.08 2.44
3687 8690 7.926018 GGCATATTTATCCCTAAAGTGTTTTGG 59.074 37.037 0.00 0.00 35.66 3.28
3688 8691 8.474831 GCATATTTATCCCTAAAGTGTTTTGGT 58.525 33.333 0.32 0.00 34.34 3.67
3689 8692 9.801873 CATATTTATCCCTAAAGTGTTTTGGTG 57.198 33.333 0.32 0.00 34.34 4.17
3690 8693 9.762381 ATATTTATCCCTAAAGTGTTTTGGTGA 57.238 29.630 0.32 0.00 34.34 4.02
3691 8694 6.887626 TTATCCCTAAAGTGTTTTGGTGAC 57.112 37.500 0.32 0.00 34.34 3.67
3692 8695 4.513406 TCCCTAAAGTGTTTTGGTGACT 57.487 40.909 0.32 0.00 34.34 3.41
3693 8696 4.204012 TCCCTAAAGTGTTTTGGTGACTG 58.796 43.478 0.32 0.00 34.34 3.51
3694 8697 4.080243 TCCCTAAAGTGTTTTGGTGACTGA 60.080 41.667 0.32 0.00 34.34 3.41
3695 8698 4.827284 CCCTAAAGTGTTTTGGTGACTGAT 59.173 41.667 0.32 0.00 34.34 2.90
3696 8699 5.278463 CCCTAAAGTGTTTTGGTGACTGATG 60.278 44.000 0.32 0.00 34.34 3.07
3697 8700 5.530915 CCTAAAGTGTTTTGGTGACTGATGA 59.469 40.000 0.00 0.00 32.01 2.92
3698 8701 4.900635 AAGTGTTTTGGTGACTGATGAC 57.099 40.909 0.00 0.00 0.00 3.06
3699 8702 3.884895 AGTGTTTTGGTGACTGATGACA 58.115 40.909 0.00 0.00 0.00 3.58
3700 8703 4.269183 AGTGTTTTGGTGACTGATGACAA 58.731 39.130 0.00 0.00 0.00 3.18
3701 8704 4.889409 AGTGTTTTGGTGACTGATGACAAT 59.111 37.500 0.00 0.00 0.00 2.71
3702 8705 4.977963 GTGTTTTGGTGACTGATGACAATG 59.022 41.667 0.00 0.00 0.00 2.82
3703 8706 3.921119 TTTGGTGACTGATGACAATGC 57.079 42.857 0.00 0.00 0.00 3.56
3704 8707 2.865119 TGGTGACTGATGACAATGCT 57.135 45.000 0.00 0.00 0.00 3.79
3705 8708 3.144657 TGGTGACTGATGACAATGCTT 57.855 42.857 0.00 0.00 0.00 3.91
3706 8709 3.489355 TGGTGACTGATGACAATGCTTT 58.511 40.909 0.00 0.00 0.00 3.51
3707 8710 3.890756 TGGTGACTGATGACAATGCTTTT 59.109 39.130 0.00 0.00 0.00 2.27
3708 8711 4.232221 GGTGACTGATGACAATGCTTTTG 58.768 43.478 0.00 0.00 0.00 2.44
3721 8724 2.159467 GCTTTTGCGGACTAATCGTG 57.841 50.000 0.00 0.00 34.86 4.35
3722 8725 1.463444 GCTTTTGCGGACTAATCGTGT 59.537 47.619 0.00 0.00 34.86 4.49
3723 8726 2.724839 GCTTTTGCGGACTAATCGTGTG 60.725 50.000 0.00 0.00 34.86 3.82
3724 8727 0.793861 TTTGCGGACTAATCGTGTGC 59.206 50.000 0.00 0.00 0.00 4.57
3725 8728 0.037697 TTGCGGACTAATCGTGTGCT 60.038 50.000 0.00 0.00 0.00 4.40
3726 8729 0.037697 TGCGGACTAATCGTGTGCTT 60.038 50.000 0.00 0.00 0.00 3.91
3727 8730 1.076332 GCGGACTAATCGTGTGCTTT 58.924 50.000 0.00 0.00 0.00 3.51
3728 8731 1.201921 GCGGACTAATCGTGTGCTTTG 60.202 52.381 0.00 0.00 0.00 2.77
3729 8732 2.333926 CGGACTAATCGTGTGCTTTGA 58.666 47.619 0.00 0.00 0.00 2.69
3730 8733 2.345641 CGGACTAATCGTGTGCTTTGAG 59.654 50.000 0.00 0.00 0.00 3.02
3731 8734 2.094417 GGACTAATCGTGTGCTTTGAGC 59.906 50.000 0.00 0.00 42.82 4.26
3732 8735 2.996621 GACTAATCGTGTGCTTTGAGCT 59.003 45.455 1.29 0.00 42.97 4.09
3733 8736 3.403038 ACTAATCGTGTGCTTTGAGCTT 58.597 40.909 1.29 0.00 42.97 3.74
3734 8737 2.977405 AATCGTGTGCTTTGAGCTTC 57.023 45.000 1.29 0.00 42.97 3.86
3735 8738 2.175878 ATCGTGTGCTTTGAGCTTCT 57.824 45.000 1.29 0.00 42.97 2.85
3736 8739 1.502231 TCGTGTGCTTTGAGCTTCTC 58.498 50.000 1.29 0.00 42.97 2.87
3737 8740 1.202521 TCGTGTGCTTTGAGCTTCTCA 60.203 47.619 1.29 0.00 42.97 3.27
3738 8741 1.194098 CGTGTGCTTTGAGCTTCTCAG 59.806 52.381 1.29 0.00 41.75 3.35
3739 8742 2.487934 GTGTGCTTTGAGCTTCTCAGA 58.512 47.619 1.29 0.00 41.75 3.27
3740 8743 2.222911 GTGTGCTTTGAGCTTCTCAGAC 59.777 50.000 1.29 0.00 41.75 3.51
3741 8744 1.458827 GTGCTTTGAGCTTCTCAGACG 59.541 52.381 1.29 0.00 41.75 4.18
3742 8745 1.069204 TGCTTTGAGCTTCTCAGACGT 59.931 47.619 0.00 0.00 41.75 4.34
3743 8746 2.139118 GCTTTGAGCTTCTCAGACGTT 58.861 47.619 0.00 0.00 41.75 3.99
3744 8747 2.545946 GCTTTGAGCTTCTCAGACGTTT 59.454 45.455 0.00 0.00 41.75 3.60
3745 8748 3.002759 GCTTTGAGCTTCTCAGACGTTTT 59.997 43.478 0.00 0.00 41.75 2.43
3746 8749 4.211374 GCTTTGAGCTTCTCAGACGTTTTA 59.789 41.667 0.00 0.00 41.75 1.52
3747 8750 5.106908 GCTTTGAGCTTCTCAGACGTTTTAT 60.107 40.000 0.00 0.00 41.75 1.40
3748 8751 6.467723 TTTGAGCTTCTCAGACGTTTTATC 57.532 37.500 0.00 0.00 41.75 1.75
3749 8752 4.166523 TGAGCTTCTCAGACGTTTTATCG 58.833 43.478 0.00 0.00 35.39 2.92
3750 8753 2.924290 AGCTTCTCAGACGTTTTATCGC 59.076 45.455 0.00 0.00 0.00 4.58
3751 8754 2.924290 GCTTCTCAGACGTTTTATCGCT 59.076 45.455 0.00 0.00 0.00 4.93
3752 8755 4.103357 GCTTCTCAGACGTTTTATCGCTA 58.897 43.478 0.00 0.00 0.00 4.26
3753 8756 4.205385 GCTTCTCAGACGTTTTATCGCTAG 59.795 45.833 0.00 0.00 0.00 3.42
3754 8757 4.288670 TCTCAGACGTTTTATCGCTAGG 57.711 45.455 0.00 0.00 0.00 3.02
3755 8758 2.789893 CTCAGACGTTTTATCGCTAGGC 59.210 50.000 0.00 0.00 0.00 3.93
3756 8759 2.164827 TCAGACGTTTTATCGCTAGGCA 59.835 45.455 0.00 0.00 0.00 4.75
3757 8760 2.281762 CAGACGTTTTATCGCTAGGCAC 59.718 50.000 0.00 0.00 0.00 5.01
3758 8761 2.094390 AGACGTTTTATCGCTAGGCACA 60.094 45.455 0.00 0.00 0.00 4.57
3759 8762 2.669434 GACGTTTTATCGCTAGGCACAA 59.331 45.455 0.00 0.00 0.00 3.33
3760 8763 2.671396 ACGTTTTATCGCTAGGCACAAG 59.329 45.455 0.00 0.00 0.00 3.16
3761 8764 2.927477 CGTTTTATCGCTAGGCACAAGA 59.073 45.455 0.00 0.00 0.00 3.02
3762 8765 3.241995 CGTTTTATCGCTAGGCACAAGAC 60.242 47.826 0.00 0.00 0.00 3.01
3763 8766 2.203800 TTATCGCTAGGCACAAGACG 57.796 50.000 0.00 0.00 0.00 4.18
3764 8767 0.384309 TATCGCTAGGCACAAGACGG 59.616 55.000 0.00 0.00 0.00 4.79
3765 8768 1.605058 ATCGCTAGGCACAAGACGGT 61.605 55.000 0.00 0.00 0.00 4.83
3766 8769 1.374252 CGCTAGGCACAAGACGGTT 60.374 57.895 0.00 0.00 0.00 4.44
3767 8770 0.949105 CGCTAGGCACAAGACGGTTT 60.949 55.000 0.00 0.00 0.00 3.27
3768 8771 0.517316 GCTAGGCACAAGACGGTTTG 59.483 55.000 0.00 0.29 0.00 2.93
3769 8772 1.156736 CTAGGCACAAGACGGTTTGG 58.843 55.000 6.19 0.00 32.32 3.28
3770 8773 0.470766 TAGGCACAAGACGGTTTGGT 59.529 50.000 6.19 0.00 32.32 3.67
3771 8774 1.101049 AGGCACAAGACGGTTTGGTG 61.101 55.000 1.93 1.93 32.32 4.17
3772 8775 1.299089 GCACAAGACGGTTTGGTGC 60.299 57.895 14.50 14.50 32.37 5.01
3773 8776 1.358759 CACAAGACGGTTTGGTGCC 59.641 57.895 6.19 0.00 32.32 5.01
3774 8777 1.826487 ACAAGACGGTTTGGTGCCC 60.826 57.895 6.19 0.00 32.32 5.36
3775 8778 2.203437 AAGACGGTTTGGTGCCCC 60.203 61.111 0.00 0.00 0.00 5.80
3776 8779 2.763645 AAGACGGTTTGGTGCCCCT 61.764 57.895 0.00 0.00 0.00 4.79
3777 8780 2.671963 GACGGTTTGGTGCCCCTC 60.672 66.667 0.00 0.00 0.00 4.30
3778 8781 4.636435 ACGGTTTGGTGCCCCTCG 62.636 66.667 0.00 0.00 0.00 4.63
3779 8782 4.323477 CGGTTTGGTGCCCCTCGA 62.323 66.667 0.00 0.00 0.00 4.04
3780 8783 2.114411 GGTTTGGTGCCCCTCGAA 59.886 61.111 0.00 0.00 0.00 3.71
3781 8784 1.971695 GGTTTGGTGCCCCTCGAAG 60.972 63.158 0.00 0.00 0.00 3.79
3782 8785 1.072505 GTTTGGTGCCCCTCGAAGA 59.927 57.895 0.00 0.00 0.00 2.87
3783 8786 1.072505 TTTGGTGCCCCTCGAAGAC 59.927 57.895 0.00 0.00 0.00 3.01
3784 8787 1.415672 TTTGGTGCCCCTCGAAGACT 61.416 55.000 0.00 0.00 0.00 3.24
3785 8788 0.543410 TTGGTGCCCCTCGAAGACTA 60.543 55.000 0.00 0.00 0.00 2.59
3786 8789 0.325296 TGGTGCCCCTCGAAGACTAT 60.325 55.000 0.00 0.00 0.00 2.12
3787 8790 0.831307 GGTGCCCCTCGAAGACTATT 59.169 55.000 0.00 0.00 0.00 1.73
3788 8791 1.473434 GGTGCCCCTCGAAGACTATTG 60.473 57.143 0.00 0.00 0.00 1.90
3789 8792 1.480954 GTGCCCCTCGAAGACTATTGA 59.519 52.381 0.00 0.00 0.00 2.57
3790 8793 2.093658 GTGCCCCTCGAAGACTATTGAA 60.094 50.000 0.00 0.00 0.00 2.69
3791 8794 2.168521 TGCCCCTCGAAGACTATTGAAG 59.831 50.000 0.00 0.00 0.00 3.02
3792 8795 2.431057 GCCCCTCGAAGACTATTGAAGA 59.569 50.000 0.00 0.00 0.00 2.87
3793 8796 3.738590 GCCCCTCGAAGACTATTGAAGAC 60.739 52.174 0.00 0.00 0.00 3.01
3794 8797 3.489398 CCCCTCGAAGACTATTGAAGACG 60.489 52.174 0.00 0.00 0.00 4.18
3795 8798 3.489398 CCCTCGAAGACTATTGAAGACGG 60.489 52.174 0.00 0.00 0.00 4.79
3796 8799 3.109619 CTCGAAGACTATTGAAGACGGC 58.890 50.000 0.00 0.00 0.00 5.68
3797 8800 1.846782 CGAAGACTATTGAAGACGGCG 59.153 52.381 4.80 4.80 0.00 6.46
3798 8801 2.731341 CGAAGACTATTGAAGACGGCGT 60.731 50.000 14.65 14.65 0.00 5.68
3799 8802 3.251571 GAAGACTATTGAAGACGGCGTT 58.748 45.455 16.19 0.00 0.00 4.84
3800 8803 3.314541 AGACTATTGAAGACGGCGTTT 57.685 42.857 16.19 5.29 0.00 3.60
3801 8804 3.660865 AGACTATTGAAGACGGCGTTTT 58.339 40.909 16.19 16.15 0.00 2.43
3802 8805 4.062991 AGACTATTGAAGACGGCGTTTTT 58.937 39.130 16.19 12.44 0.00 1.94
3803 8806 4.151867 AGACTATTGAAGACGGCGTTTTTC 59.848 41.667 22.97 22.97 0.00 2.29
3804 8807 4.062991 ACTATTGAAGACGGCGTTTTTCT 58.937 39.130 26.90 14.37 0.00 2.52
3805 8808 5.232463 ACTATTGAAGACGGCGTTTTTCTA 58.768 37.500 26.90 22.75 0.00 2.10
3806 8809 3.865224 TTGAAGACGGCGTTTTTCTAC 57.135 42.857 26.90 13.59 0.00 2.59
3807 8810 1.788308 TGAAGACGGCGTTTTTCTACG 59.212 47.619 26.90 0.00 44.09 3.51
3808 8811 1.788886 GAAGACGGCGTTTTTCTACGT 59.211 47.619 16.19 0.00 43.22 3.57
3809 8812 1.856802 AGACGGCGTTTTTCTACGTT 58.143 45.000 16.19 0.00 43.22 3.99
3810 8813 2.204237 AGACGGCGTTTTTCTACGTTT 58.796 42.857 16.19 0.00 43.22 3.60
3811 8814 2.219445 AGACGGCGTTTTTCTACGTTTC 59.781 45.455 16.19 0.00 43.22 2.78
3812 8815 2.204237 ACGGCGTTTTTCTACGTTTCT 58.796 42.857 6.77 0.00 43.22 2.52
3813 8816 2.609002 ACGGCGTTTTTCTACGTTTCTT 59.391 40.909 6.77 0.00 43.22 2.52
3814 8817 3.063861 ACGGCGTTTTTCTACGTTTCTTT 59.936 39.130 6.77 0.00 43.22 2.52
3815 8818 3.656266 CGGCGTTTTTCTACGTTTCTTTC 59.344 43.478 0.00 0.00 43.22 2.62
3816 8819 3.970610 GGCGTTTTTCTACGTTTCTTTCC 59.029 43.478 0.00 0.00 43.22 3.13
3817 8820 3.656266 GCGTTTTTCTACGTTTCTTTCCG 59.344 43.478 0.00 0.00 43.22 4.30
3818 8821 4.206088 CGTTTTTCTACGTTTCTTTCCGG 58.794 43.478 0.00 0.00 36.80 5.14
3819 8822 4.260334 CGTTTTTCTACGTTTCTTTCCGGT 60.260 41.667 0.00 0.00 36.80 5.28
3820 8823 4.799419 TTTTCTACGTTTCTTTCCGGTG 57.201 40.909 0.00 0.00 0.00 4.94
3821 8824 2.443887 TCTACGTTTCTTTCCGGTGG 57.556 50.000 0.00 0.00 0.00 4.61
3822 8825 1.962807 TCTACGTTTCTTTCCGGTGGA 59.037 47.619 0.00 0.00 0.00 4.02
3823 8826 2.564062 TCTACGTTTCTTTCCGGTGGAT 59.436 45.455 0.00 0.00 0.00 3.41
3824 8827 2.265589 ACGTTTCTTTCCGGTGGATT 57.734 45.000 0.00 0.00 0.00 3.01
3825 8828 2.578786 ACGTTTCTTTCCGGTGGATTT 58.421 42.857 0.00 0.00 0.00 2.17
3826 8829 2.292292 ACGTTTCTTTCCGGTGGATTTG 59.708 45.455 0.00 0.00 0.00 2.32
3827 8830 2.550606 CGTTTCTTTCCGGTGGATTTGA 59.449 45.455 0.00 0.00 0.00 2.69
3828 8831 3.364964 CGTTTCTTTCCGGTGGATTTGAG 60.365 47.826 0.00 0.00 0.00 3.02
3829 8832 3.502123 TTCTTTCCGGTGGATTTGAGT 57.498 42.857 0.00 0.00 0.00 3.41
3830 8833 3.053831 TCTTTCCGGTGGATTTGAGTC 57.946 47.619 0.00 0.00 0.00 3.36
3831 8834 1.732259 CTTTCCGGTGGATTTGAGTCG 59.268 52.381 0.00 0.00 0.00 4.18
3832 8835 0.682852 TTCCGGTGGATTTGAGTCGT 59.317 50.000 0.00 0.00 0.00 4.34
3833 8836 1.548081 TCCGGTGGATTTGAGTCGTA 58.452 50.000 0.00 0.00 0.00 3.43
3834 8837 1.475280 TCCGGTGGATTTGAGTCGTAG 59.525 52.381 0.00 0.00 0.00 3.51
3835 8838 1.470979 CCGGTGGATTTGAGTCGTAGG 60.471 57.143 0.00 0.00 0.00 3.18
3836 8839 1.475280 CGGTGGATTTGAGTCGTAGGA 59.525 52.381 0.00 0.00 0.00 2.94
3837 8840 2.094390 CGGTGGATTTGAGTCGTAGGAA 60.094 50.000 0.00 0.00 0.00 3.36
3838 8841 3.615592 CGGTGGATTTGAGTCGTAGGAAA 60.616 47.826 0.00 0.00 0.00 3.13
3839 8842 3.933332 GGTGGATTTGAGTCGTAGGAAAG 59.067 47.826 0.00 0.00 0.00 2.62
3840 8843 3.371285 GTGGATTTGAGTCGTAGGAAAGC 59.629 47.826 0.00 0.00 0.00 3.51
3841 8844 2.937149 GGATTTGAGTCGTAGGAAAGCC 59.063 50.000 0.00 0.00 0.00 4.35
3842 8845 2.074547 TTTGAGTCGTAGGAAAGCCG 57.925 50.000 0.00 0.00 39.96 5.52
3843 8846 0.963962 TTGAGTCGTAGGAAAGCCGT 59.036 50.000 0.00 0.00 39.96 5.68
3844 8847 1.825090 TGAGTCGTAGGAAAGCCGTA 58.175 50.000 0.00 0.00 39.96 4.02
3845 8848 1.470098 TGAGTCGTAGGAAAGCCGTAC 59.530 52.381 0.00 0.00 39.96 3.67
3846 8849 1.742268 GAGTCGTAGGAAAGCCGTACT 59.258 52.381 0.00 0.00 39.96 2.73
3847 8850 2.939103 GAGTCGTAGGAAAGCCGTACTA 59.061 50.000 0.00 0.00 39.96 1.82
3848 8851 3.549794 AGTCGTAGGAAAGCCGTACTAT 58.450 45.455 0.00 0.00 39.96 2.12
3849 8852 3.950395 AGTCGTAGGAAAGCCGTACTATT 59.050 43.478 0.00 0.00 39.96 1.73
3850 8853 5.126067 AGTCGTAGGAAAGCCGTACTATTA 58.874 41.667 0.00 0.00 39.96 0.98
3851 8854 5.590259 AGTCGTAGGAAAGCCGTACTATTAA 59.410 40.000 0.00 0.00 39.96 1.40
3852 8855 5.911838 GTCGTAGGAAAGCCGTACTATTAAG 59.088 44.000 0.00 0.00 39.96 1.85
3853 8856 5.822519 TCGTAGGAAAGCCGTACTATTAAGA 59.177 40.000 0.00 0.00 39.96 2.10
3854 8857 6.017605 TCGTAGGAAAGCCGTACTATTAAGAG 60.018 42.308 0.00 0.00 39.96 2.85
3855 8858 5.532664 AGGAAAGCCGTACTATTAAGAGG 57.467 43.478 1.59 0.00 39.96 3.69
3856 8859 4.344390 AGGAAAGCCGTACTATTAAGAGGG 59.656 45.833 1.59 0.00 39.96 4.30
3857 8860 4.502777 GGAAAGCCGTACTATTAAGAGGGG 60.503 50.000 1.59 1.33 0.00 4.79
3858 8861 2.606378 AGCCGTACTATTAAGAGGGGG 58.394 52.381 1.59 0.99 0.00 5.40
3859 8862 2.090887 AGCCGTACTATTAAGAGGGGGT 60.091 50.000 1.59 2.91 0.00 4.95
3860 8863 2.298446 GCCGTACTATTAAGAGGGGGTC 59.702 54.545 1.59 0.00 0.00 4.46
3861 8864 2.896044 CCGTACTATTAAGAGGGGGTCC 59.104 54.545 1.59 0.00 0.00 4.46
3862 8865 2.555757 CGTACTATTAAGAGGGGGTCCG 59.444 54.545 1.59 0.00 38.33 4.79
3863 8866 1.421480 ACTATTAAGAGGGGGTCCGC 58.579 55.000 1.59 0.00 38.33 5.54
3864 8867 1.062352 ACTATTAAGAGGGGGTCCGCT 60.062 52.381 6.27 6.27 45.35 5.52
3878 8881 3.165498 CGCTTCGGAAAGGTTCGG 58.835 61.111 0.00 0.00 32.79 4.30
3879 8882 2.388232 CGCTTCGGAAAGGTTCGGG 61.388 63.158 0.00 0.00 32.79 5.14
3880 8883 1.302271 GCTTCGGAAAGGTTCGGGT 60.302 57.895 0.00 0.00 32.79 5.28
3881 8884 1.574702 GCTTCGGAAAGGTTCGGGTG 61.575 60.000 0.00 0.00 32.79 4.61
3882 8885 0.953960 CTTCGGAAAGGTTCGGGTGG 60.954 60.000 0.00 0.00 0.00 4.61
3883 8886 1.409251 TTCGGAAAGGTTCGGGTGGA 61.409 55.000 0.00 0.00 0.00 4.02
3884 8887 1.071814 CGGAAAGGTTCGGGTGGAA 59.928 57.895 0.00 0.00 0.00 3.53
3885 8888 0.322187 CGGAAAGGTTCGGGTGGAAT 60.322 55.000 0.00 0.00 36.92 3.01
3886 8889 1.460504 GGAAAGGTTCGGGTGGAATC 58.539 55.000 0.00 0.00 36.92 2.52
3887 8890 1.271707 GGAAAGGTTCGGGTGGAATCA 60.272 52.381 0.00 0.00 38.28 2.57
3888 8891 2.620627 GGAAAGGTTCGGGTGGAATCAT 60.621 50.000 0.00 0.00 38.28 2.45
3889 8892 2.420058 AAGGTTCGGGTGGAATCATC 57.580 50.000 0.00 0.00 38.28 2.92
3890 8893 1.285280 AGGTTCGGGTGGAATCATCA 58.715 50.000 0.00 0.00 38.28 3.07
3891 8894 1.065418 AGGTTCGGGTGGAATCATCAC 60.065 52.381 0.00 0.00 38.28 3.06
3892 8895 1.006832 GTTCGGGTGGAATCATCACG 58.993 55.000 0.00 0.00 36.92 4.35
3893 8896 0.611200 TTCGGGTGGAATCATCACGT 59.389 50.000 0.00 0.00 36.09 4.49
3894 8897 1.476477 TCGGGTGGAATCATCACGTA 58.524 50.000 0.00 0.00 36.09 3.57
3895 8898 1.135527 TCGGGTGGAATCATCACGTAC 59.864 52.381 0.00 0.00 36.09 3.67
3896 8899 1.134936 CGGGTGGAATCATCACGTACA 60.135 52.381 0.00 0.00 36.09 2.90
3897 8900 2.277084 GGGTGGAATCATCACGTACAC 58.723 52.381 0.00 0.00 36.09 2.90
3898 8901 1.924524 GGTGGAATCATCACGTACACG 59.075 52.381 0.00 0.00 46.33 4.49
3911 8914 3.972706 CGTACACGTTCTCATCCTTTG 57.027 47.619 0.00 0.00 34.11 2.77
3912 8915 2.092211 CGTACACGTTCTCATCCTTTGC 59.908 50.000 0.00 0.00 34.11 3.68
3913 8916 2.254546 ACACGTTCTCATCCTTTGCA 57.745 45.000 0.00 0.00 0.00 4.08
3914 8917 1.873591 ACACGTTCTCATCCTTTGCAC 59.126 47.619 0.00 0.00 0.00 4.57
3915 8918 1.197721 CACGTTCTCATCCTTTGCACC 59.802 52.381 0.00 0.00 0.00 5.01
3916 8919 0.443869 CGTTCTCATCCTTTGCACCG 59.556 55.000 0.00 0.00 0.00 4.94
3917 8920 0.169009 GTTCTCATCCTTTGCACCGC 59.831 55.000 0.00 0.00 0.00 5.68
3918 8921 0.960364 TTCTCATCCTTTGCACCGCC 60.960 55.000 0.00 0.00 0.00 6.13
3919 8922 1.377725 CTCATCCTTTGCACCGCCT 60.378 57.895 0.00 0.00 0.00 5.52
3920 8923 0.962356 CTCATCCTTTGCACCGCCTT 60.962 55.000 0.00 0.00 0.00 4.35
3921 8924 0.539438 TCATCCTTTGCACCGCCTTT 60.539 50.000 0.00 0.00 0.00 3.11
3922 8925 0.109132 CATCCTTTGCACCGCCTTTC 60.109 55.000 0.00 0.00 0.00 2.62
3923 8926 1.250840 ATCCTTTGCACCGCCTTTCC 61.251 55.000 0.00 0.00 0.00 3.13
3924 8927 1.903404 CCTTTGCACCGCCTTTCCT 60.903 57.895 0.00 0.00 0.00 3.36
3925 8928 1.581447 CTTTGCACCGCCTTTCCTC 59.419 57.895 0.00 0.00 0.00 3.71
3926 8929 0.890996 CTTTGCACCGCCTTTCCTCT 60.891 55.000 0.00 0.00 0.00 3.69
3927 8930 1.172180 TTTGCACCGCCTTTCCTCTG 61.172 55.000 0.00 0.00 0.00 3.35
3928 8931 2.747855 GCACCGCCTTTCCTCTGG 60.748 66.667 0.00 0.00 0.00 3.86
3929 8932 2.747855 CACCGCCTTTCCTCTGGC 60.748 66.667 0.00 0.00 45.25 4.85
3937 8940 3.703001 CCTTTCCTCTGGCACTTTAGA 57.297 47.619 0.00 0.00 0.00 2.10
3938 8941 3.604582 CCTTTCCTCTGGCACTTTAGAG 58.395 50.000 0.00 0.00 40.05 2.43
3939 8942 2.770164 TTCCTCTGGCACTTTAGAGC 57.230 50.000 0.00 0.00 39.24 4.09
3940 8943 1.644509 TCCTCTGGCACTTTAGAGCA 58.355 50.000 1.78 0.00 39.24 4.26
3941 8944 2.191400 TCCTCTGGCACTTTAGAGCAT 58.809 47.619 1.78 0.00 39.24 3.79
3942 8945 2.169352 TCCTCTGGCACTTTAGAGCATC 59.831 50.000 1.78 0.00 39.24 3.91
3943 8946 2.559440 CTCTGGCACTTTAGAGCATCC 58.441 52.381 1.78 0.00 34.60 3.51
3944 8947 2.170187 CTCTGGCACTTTAGAGCATCCT 59.830 50.000 1.78 0.00 34.60 3.24
3945 8948 2.169352 TCTGGCACTTTAGAGCATCCTC 59.831 50.000 1.78 0.00 38.42 3.71
3946 8949 1.210478 TGGCACTTTAGAGCATCCTCC 59.790 52.381 1.78 0.00 38.96 4.30
3947 8950 1.576356 GCACTTTAGAGCATCCTCCG 58.424 55.000 0.00 0.00 38.96 4.63
3948 8951 1.134670 GCACTTTAGAGCATCCTCCGT 60.135 52.381 0.00 0.00 38.96 4.69
3949 8952 2.678190 GCACTTTAGAGCATCCTCCGTT 60.678 50.000 0.00 0.00 38.96 4.44
3950 8953 3.600388 CACTTTAGAGCATCCTCCGTTT 58.400 45.455 0.00 0.00 38.96 3.60
3951 8954 4.003648 CACTTTAGAGCATCCTCCGTTTT 58.996 43.478 0.00 0.00 38.96 2.43
3952 8955 5.175859 CACTTTAGAGCATCCTCCGTTTTA 58.824 41.667 0.00 0.00 38.96 1.52
3953 8956 5.817816 CACTTTAGAGCATCCTCCGTTTTAT 59.182 40.000 0.00 0.00 38.96 1.40
3954 8957 6.018669 CACTTTAGAGCATCCTCCGTTTTATC 60.019 42.308 0.00 0.00 38.96 1.75
3955 8958 3.477210 AGAGCATCCTCCGTTTTATCC 57.523 47.619 0.00 0.00 38.96 2.59
3956 8959 3.041946 AGAGCATCCTCCGTTTTATCCT 58.958 45.455 0.00 0.00 38.96 3.24
3957 8960 3.070302 AGAGCATCCTCCGTTTTATCCTC 59.930 47.826 0.00 0.00 38.96 3.71
3958 8961 3.041946 AGCATCCTCCGTTTTATCCTCT 58.958 45.455 0.00 0.00 0.00 3.69
3959 8962 4.223953 AGCATCCTCCGTTTTATCCTCTA 58.776 43.478 0.00 0.00 0.00 2.43
3960 8963 4.841246 AGCATCCTCCGTTTTATCCTCTAT 59.159 41.667 0.00 0.00 0.00 1.98
3961 8964 4.932200 GCATCCTCCGTTTTATCCTCTATG 59.068 45.833 0.00 0.00 0.00 2.23
3962 8965 4.602340 TCCTCCGTTTTATCCTCTATGC 57.398 45.455 0.00 0.00 0.00 3.14
3963 8966 3.964688 TCCTCCGTTTTATCCTCTATGCA 59.035 43.478 0.00 0.00 0.00 3.96
3964 8967 4.593206 TCCTCCGTTTTATCCTCTATGCAT 59.407 41.667 3.79 3.79 0.00 3.96
3965 8968 5.071788 TCCTCCGTTTTATCCTCTATGCATT 59.928 40.000 3.54 0.00 0.00 3.56
3966 8969 5.409826 CCTCCGTTTTATCCTCTATGCATTC 59.590 44.000 3.54 0.00 0.00 2.67
3967 8970 6.174720 TCCGTTTTATCCTCTATGCATTCT 57.825 37.500 3.54 0.00 0.00 2.40
3968 8971 5.991606 TCCGTTTTATCCTCTATGCATTCTG 59.008 40.000 3.54 0.00 0.00 3.02
3969 8972 5.760253 CCGTTTTATCCTCTATGCATTCTGT 59.240 40.000 3.54 0.00 0.00 3.41
3970 8973 6.073548 CCGTTTTATCCTCTATGCATTCTGTC 60.074 42.308 3.54 0.00 0.00 3.51
3971 8974 6.703607 CGTTTTATCCTCTATGCATTCTGTCT 59.296 38.462 3.54 0.00 0.00 3.41
3972 8975 7.225538 CGTTTTATCCTCTATGCATTCTGTCTT 59.774 37.037 3.54 0.00 0.00 3.01
3973 8976 8.341173 GTTTTATCCTCTATGCATTCTGTCTTG 58.659 37.037 3.54 0.00 0.00 3.02
3974 8977 4.412796 TCCTCTATGCATTCTGTCTTGG 57.587 45.455 3.54 0.00 0.00 3.61
3975 8978 3.776969 TCCTCTATGCATTCTGTCTTGGT 59.223 43.478 3.54 0.00 0.00 3.67
3976 8979 4.225942 TCCTCTATGCATTCTGTCTTGGTT 59.774 41.667 3.54 0.00 0.00 3.67
3977 8980 4.334759 CCTCTATGCATTCTGTCTTGGTTG 59.665 45.833 3.54 0.00 0.00 3.77
3978 8981 3.691118 TCTATGCATTCTGTCTTGGTTGC 59.309 43.478 3.54 0.00 0.00 4.17
3979 8982 1.985473 TGCATTCTGTCTTGGTTGCT 58.015 45.000 0.00 0.00 0.00 3.91
3980 8983 1.610038 TGCATTCTGTCTTGGTTGCTG 59.390 47.619 0.00 0.00 0.00 4.41
3981 8984 1.881973 GCATTCTGTCTTGGTTGCTGA 59.118 47.619 0.00 0.00 0.00 4.26
3982 8985 2.490903 GCATTCTGTCTTGGTTGCTGAT 59.509 45.455 0.00 0.00 0.00 2.90
3983 8986 3.691118 GCATTCTGTCTTGGTTGCTGATA 59.309 43.478 0.00 0.00 0.00 2.15
3984 8987 4.437930 GCATTCTGTCTTGGTTGCTGATAC 60.438 45.833 0.00 0.00 0.00 2.24
3985 8988 4.623932 TTCTGTCTTGGTTGCTGATACT 57.376 40.909 0.00 0.00 0.00 2.12
3986 8989 3.930336 TCTGTCTTGGTTGCTGATACTG 58.070 45.455 0.00 0.00 0.00 2.74
3987 8990 3.005554 CTGTCTTGGTTGCTGATACTGG 58.994 50.000 0.00 0.00 0.00 4.00
3988 8991 2.290260 TGTCTTGGTTGCTGATACTGGG 60.290 50.000 0.00 0.00 0.00 4.45
3989 8992 1.098050 CTTGGTTGCTGATACTGGGC 58.902 55.000 0.00 0.00 0.00 5.36
3990 8993 0.698238 TTGGTTGCTGATACTGGGCT 59.302 50.000 0.00 0.00 0.00 5.19
3991 8994 0.698238 TGGTTGCTGATACTGGGCTT 59.302 50.000 0.00 0.00 0.00 4.35
3992 8995 1.098050 GGTTGCTGATACTGGGCTTG 58.902 55.000 0.00 0.00 0.00 4.01
3993 8996 0.453390 GTTGCTGATACTGGGCTTGC 59.547 55.000 0.00 0.00 0.00 4.01
3994 8997 1.026182 TTGCTGATACTGGGCTTGCG 61.026 55.000 0.00 0.00 0.00 4.85
3995 8998 2.182842 GCTGATACTGGGCTTGCGG 61.183 63.158 0.00 0.00 0.00 5.69
3996 8999 1.221840 CTGATACTGGGCTTGCGGT 59.778 57.895 0.00 0.00 0.00 5.68
3997 9000 0.464036 CTGATACTGGGCTTGCGGTA 59.536 55.000 0.00 0.00 0.00 4.02
3998 9001 0.464036 TGATACTGGGCTTGCGGTAG 59.536 55.000 0.00 0.00 0.00 3.18
3999 9002 0.464452 GATACTGGGCTTGCGGTAGT 59.536 55.000 0.00 0.00 0.00 2.73
4000 9003 1.684983 GATACTGGGCTTGCGGTAGTA 59.315 52.381 0.00 0.00 0.00 1.82
4001 9004 0.819582 TACTGGGCTTGCGGTAGTAC 59.180 55.000 0.00 0.00 0.00 2.73
4002 9005 0.903454 ACTGGGCTTGCGGTAGTACT 60.903 55.000 0.00 0.00 0.00 2.73
4003 9006 0.460284 CTGGGCTTGCGGTAGTACTG 60.460 60.000 5.39 4.63 0.00 2.74
4010 9013 1.437986 GCGGTAGTACTGCTCCTGG 59.562 63.158 24.15 0.00 46.62 4.45
4011 9014 1.035932 GCGGTAGTACTGCTCCTGGA 61.036 60.000 24.15 0.00 46.62 3.86
4012 9015 1.471119 CGGTAGTACTGCTCCTGGAA 58.529 55.000 10.95 0.00 0.00 3.53
4013 9016 1.405821 CGGTAGTACTGCTCCTGGAAG 59.594 57.143 10.95 0.00 0.00 3.46
4014 9017 1.137282 GGTAGTACTGCTCCTGGAAGC 59.863 57.143 10.95 4.57 42.82 3.86
4015 9018 1.103803 TAGTACTGCTCCTGGAAGCG 58.896 55.000 5.39 3.75 45.54 4.68
4018 9021 3.298958 CTGCTCCTGGAAGCGGTA 58.701 61.111 14.90 0.00 45.54 4.02
4019 9022 1.142748 CTGCTCCTGGAAGCGGTAG 59.857 63.158 14.90 2.59 45.54 3.18
4020 9023 1.608717 CTGCTCCTGGAAGCGGTAGT 61.609 60.000 14.90 0.00 45.54 2.73
4021 9024 0.323999 TGCTCCTGGAAGCGGTAGTA 60.324 55.000 0.00 0.00 45.54 1.82
4022 9025 0.102663 GCTCCTGGAAGCGGTAGTAC 59.897 60.000 0.00 0.00 31.56 2.73
4023 9026 0.745468 CTCCTGGAAGCGGTAGTACC 59.255 60.000 9.50 9.50 34.05 3.34
4040 9043 2.490217 CGGACCTCGGTGCAGTAG 59.510 66.667 8.34 0.00 36.19 2.57
4041 9044 2.341101 CGGACCTCGGTGCAGTAGT 61.341 63.158 8.34 0.00 36.19 2.73
4042 9045 1.028330 CGGACCTCGGTGCAGTAGTA 61.028 60.000 8.34 0.00 36.19 1.82
4043 9046 0.455005 GGACCTCGGTGCAGTAGTAC 59.545 60.000 2.47 0.00 36.45 2.73
4044 9047 0.455005 GACCTCGGTGCAGTAGTACC 59.545 60.000 0.00 0.00 45.94 3.34
4048 9051 4.496670 GGTGCAGTAGTACCGCAG 57.503 61.111 11.48 0.00 40.76 5.18
4062 9065 4.016706 GCAGGTGCCCACGGTAGT 62.017 66.667 0.00 0.00 34.31 2.73
4063 9066 2.652095 GCAGGTGCCCACGGTAGTA 61.652 63.158 0.00 0.00 34.31 1.82
4064 9067 1.217244 CAGGTGCCCACGGTAGTAC 59.783 63.158 0.00 0.00 0.00 2.73
4065 9068 1.986210 AGGTGCCCACGGTAGTACC 60.986 63.158 9.50 9.50 34.05 3.34
4075 9078 2.416901 GGTAGTACCGCTCCTCAGG 58.583 63.158 2.90 0.00 0.00 3.86
4076 9079 0.106819 GGTAGTACCGCTCCTCAGGA 60.107 60.000 2.90 0.00 0.00 3.86
4087 9090 2.303175 CTCCTCAGGAGCTGTAGTACC 58.697 57.143 8.12 0.00 43.29 3.34
4088 9091 1.025812 CCTCAGGAGCTGTAGTACCG 58.974 60.000 0.00 0.00 32.61 4.02
4089 9092 1.682394 CCTCAGGAGCTGTAGTACCGT 60.682 57.143 0.00 0.00 32.61 4.83
4090 9093 1.402259 CTCAGGAGCTGTAGTACCGTG 59.598 57.143 0.00 0.00 32.61 4.94
4091 9094 0.456221 CAGGAGCTGTAGTACCGTGG 59.544 60.000 0.00 0.00 0.00 4.94
4092 9095 1.141234 GGAGCTGTAGTACCGTGGC 59.859 63.158 0.00 0.00 0.00 5.01
4093 9096 1.141234 GAGCTGTAGTACCGTGGCC 59.859 63.158 0.00 0.00 0.00 5.36
4094 9097 2.186125 GCTGTAGTACCGTGGCCC 59.814 66.667 0.00 0.00 0.00 5.80
4095 9098 2.897972 CTGTAGTACCGTGGCCCC 59.102 66.667 0.00 0.00 0.00 5.80
4096 9099 2.684655 TGTAGTACCGTGGCCCCC 60.685 66.667 0.00 0.00 0.00 5.40
4097 9100 2.684655 GTAGTACCGTGGCCCCCA 60.685 66.667 0.00 0.00 0.00 4.96
4098 9101 2.364579 TAGTACCGTGGCCCCCAG 60.365 66.667 0.00 0.00 32.34 4.45
4099 9102 3.988050 TAGTACCGTGGCCCCCAGG 62.988 68.421 0.00 0.01 38.91 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 8.034215 TCAGTTTTGCCATATATTTTCTGTTGG 58.966 33.333 0.00 0.00 0.00 3.77
35 37 2.151202 TCGGATTCTGTCAGTTTTGCC 58.849 47.619 0.00 0.00 0.00 4.52
36 38 3.896648 TTCGGATTCTGTCAGTTTTGC 57.103 42.857 0.00 0.00 0.00 3.68
102 104 2.484264 CCTGAAACTGTCCATTCCGAAC 59.516 50.000 0.00 0.00 0.00 3.95
168 171 4.272748 GCAACGGTTTAGTGAAGAAAGAGT 59.727 41.667 0.00 0.00 0.00 3.24
183 186 1.944709 GTGGTGAAACTAGCAACGGTT 59.055 47.619 0.00 0.00 36.74 4.44
204 207 2.489938 AATAGTGGATGCACGGTGTT 57.510 45.000 12.02 3.08 0.00 3.32
258 270 2.421424 CACCAGAGCCAAGCTAAATGAC 59.579 50.000 0.00 0.00 39.88 3.06
280 292 2.880890 GAGAGACCAAAAAGAGCAGCAA 59.119 45.455 0.00 0.00 0.00 3.91
316 328 0.461548 TATTCTCCAGCTCGGTGCAG 59.538 55.000 4.74 0.00 45.94 4.41
317 329 0.461548 CTATTCTCCAGCTCGGTGCA 59.538 55.000 4.74 0.00 45.94 4.57
318 330 0.878086 GCTATTCTCCAGCTCGGTGC 60.878 60.000 0.00 0.00 43.29 5.01
334 346 0.397816 GGAGCTGGAGAAGGGAGCTA 60.398 60.000 0.00 0.00 43.18 3.32
336 348 1.685355 GAGGAGCTGGAGAAGGGAGC 61.685 65.000 0.00 0.00 0.00 4.70
375 389 2.028130 CTACTGGATTCTCGTGAGGCT 58.972 52.381 0.00 0.00 0.00 4.58
393 407 6.983307 GCTCTCTCAACTTCAATAGAATGCTA 59.017 38.462 0.00 0.00 32.31 3.49
444 462 5.007136 GGAGGCGATTTCAGAGTCAAATAAG 59.993 44.000 0.00 0.00 0.00 1.73
859 915 4.217334 TGTTGTTTGACAGTTTCTGAAGCA 59.783 37.500 7.01 0.00 35.18 3.91
985 1414 3.893326 AGGCATGGTAAAATTCTTGGC 57.107 42.857 0.00 0.00 35.07 4.52
998 1431 1.133025 CCAAGCTAAACGAAGGCATGG 59.867 52.381 0.00 0.00 38.22 3.66
1144 1577 1.962822 ATGTGCAGCAGTCGGTGTG 60.963 57.895 0.00 0.00 42.79 3.82
1296 1729 2.386864 TGGCAAGCCACCAGATAGT 58.613 52.632 10.24 0.00 41.89 2.12
1393 1826 1.091771 CGCGCAGGGATTGAAGATGT 61.092 55.000 8.75 0.00 46.37 3.06
1558 1991 1.174712 AGCACAGCAAAAGATGGCGT 61.175 50.000 0.00 0.00 34.54 5.68
1703 2137 1.819903 AGAGGTGCTCTAACGAGGTTC 59.180 52.381 0.00 0.00 39.28 3.62
2133 2567 5.366768 TGATAGGAATAACAGGGACTTCAGG 59.633 44.000 0.00 0.00 34.60 3.86
2168 2602 9.424319 GTGTTCTTGTGATATTTGTAAGAGAGA 57.576 33.333 0.00 0.00 0.00 3.10
2282 2716 4.639310 CCTGGAGATTCTTGAAACCATCTG 59.361 45.833 0.00 0.00 0.00 2.90
2283 2717 4.290722 ACCTGGAGATTCTTGAAACCATCT 59.709 41.667 0.00 0.00 0.00 2.90
2502 2936 4.102054 TCTGATTCTAGCATTGGCATCTCA 59.898 41.667 0.00 0.00 44.61 3.27
2660 3097 2.686915 AGTCCTTGTAACCTACCGATCG 59.313 50.000 8.51 8.51 0.00 3.69
2748 3185 0.322975 AGTCGAGCATCTGCAGGTTT 59.677 50.000 15.13 0.00 45.16 3.27
2810 3247 3.194116 TCTGGAAAGGAAATGCAGATTGC 59.806 43.478 0.00 0.00 39.87 3.56
2921 3359 2.110011 ACCATAGGGCCACAGAGTTTTT 59.890 45.455 6.18 0.00 37.90 1.94
2928 3366 0.611618 TTGCAACCATAGGGCCACAG 60.612 55.000 6.18 0.00 37.90 3.66
3082 3520 6.719370 ACATGGTTTTAGCCAAAATGTCTAGA 59.281 34.615 0.00 0.00 42.48 2.43
3120 3558 6.267496 ACAAGTATTAACCATTTGTGAGCC 57.733 37.500 0.63 0.00 31.34 4.70
3189 3627 5.352846 GTGCTTTCCCTGTAGATTCTCTTTC 59.647 44.000 0.00 0.00 0.00 2.62
3284 3725 8.084684 AGAAATGTTCTTTACCAAATCAGCTTC 58.915 33.333 0.00 0.00 36.36 3.86
3437 3897 1.145738 AGTTGGTCTGATTGGCAAGGT 59.854 47.619 5.96 0.00 0.00 3.50
3586 8589 7.451255 TGATTGTTCTGAAATTAGTGGTTCCAT 59.549 33.333 0.00 0.00 0.00 3.41
3660 8663 7.597288 AAACACTTTAGGGATAAATATGCCC 57.403 36.000 7.29 0.00 44.38 5.36
3661 8664 7.926018 CCAAAACACTTTAGGGATAAATATGCC 59.074 37.037 2.96 2.96 43.72 4.40
3662 8665 8.474831 ACCAAAACACTTTAGGGATAAATATGC 58.525 33.333 0.00 0.00 0.00 3.14
3663 8666 9.801873 CACCAAAACACTTTAGGGATAAATATG 57.198 33.333 0.00 0.00 0.00 1.78
3664 8667 9.762381 TCACCAAAACACTTTAGGGATAAATAT 57.238 29.630 0.00 0.00 0.00 1.28
3665 8668 9.016438 GTCACCAAAACACTTTAGGGATAAATA 57.984 33.333 0.00 0.00 0.00 1.40
3666 8669 7.728532 AGTCACCAAAACACTTTAGGGATAAAT 59.271 33.333 0.00 0.00 0.00 1.40
3667 8670 7.013846 CAGTCACCAAAACACTTTAGGGATAAA 59.986 37.037 0.00 0.00 0.00 1.40
3668 8671 6.488683 CAGTCACCAAAACACTTTAGGGATAA 59.511 38.462 0.00 0.00 0.00 1.75
3669 8672 6.001460 CAGTCACCAAAACACTTTAGGGATA 58.999 40.000 0.00 0.00 0.00 2.59
3670 8673 4.827284 CAGTCACCAAAACACTTTAGGGAT 59.173 41.667 0.00 0.00 0.00 3.85
3671 8674 4.080243 TCAGTCACCAAAACACTTTAGGGA 60.080 41.667 0.00 0.00 0.00 4.20
3672 8675 4.204012 TCAGTCACCAAAACACTTTAGGG 58.796 43.478 0.00 0.00 0.00 3.53
3673 8676 5.530915 TCATCAGTCACCAAAACACTTTAGG 59.469 40.000 0.00 0.00 0.00 2.69
3674 8677 6.038161 TGTCATCAGTCACCAAAACACTTTAG 59.962 38.462 0.00 0.00 0.00 1.85
3675 8678 5.883115 TGTCATCAGTCACCAAAACACTTTA 59.117 36.000 0.00 0.00 0.00 1.85
3676 8679 4.704540 TGTCATCAGTCACCAAAACACTTT 59.295 37.500 0.00 0.00 0.00 2.66
3677 8680 4.269183 TGTCATCAGTCACCAAAACACTT 58.731 39.130 0.00 0.00 0.00 3.16
3678 8681 3.884895 TGTCATCAGTCACCAAAACACT 58.115 40.909 0.00 0.00 0.00 3.55
3679 8682 4.630894 TTGTCATCAGTCACCAAAACAC 57.369 40.909 0.00 0.00 0.00 3.32
3680 8683 4.499526 GCATTGTCATCAGTCACCAAAACA 60.500 41.667 0.00 0.00 0.00 2.83
3681 8684 3.983344 GCATTGTCATCAGTCACCAAAAC 59.017 43.478 0.00 0.00 0.00 2.43
3682 8685 3.890756 AGCATTGTCATCAGTCACCAAAA 59.109 39.130 0.00 0.00 0.00 2.44
3683 8686 3.489355 AGCATTGTCATCAGTCACCAAA 58.511 40.909 0.00 0.00 0.00 3.28
3684 8687 3.144657 AGCATTGTCATCAGTCACCAA 57.855 42.857 0.00 0.00 0.00 3.67
3685 8688 2.865119 AGCATTGTCATCAGTCACCA 57.135 45.000 0.00 0.00 0.00 4.17
3686 8689 4.232221 CAAAAGCATTGTCATCAGTCACC 58.768 43.478 0.00 0.00 0.00 4.02
3687 8690 3.671928 GCAAAAGCATTGTCATCAGTCAC 59.328 43.478 4.47 0.00 0.00 3.67
3688 8691 3.609879 CGCAAAAGCATTGTCATCAGTCA 60.610 43.478 4.47 0.00 0.00 3.41
3689 8692 2.912967 CGCAAAAGCATTGTCATCAGTC 59.087 45.455 4.47 0.00 0.00 3.51
3690 8693 2.352030 CCGCAAAAGCATTGTCATCAGT 60.352 45.455 4.47 0.00 0.00 3.41
3691 8694 2.095110 TCCGCAAAAGCATTGTCATCAG 60.095 45.455 4.47 0.00 0.00 2.90
3692 8695 1.885233 TCCGCAAAAGCATTGTCATCA 59.115 42.857 4.47 0.00 0.00 3.07
3693 8696 2.095059 AGTCCGCAAAAGCATTGTCATC 60.095 45.455 4.47 0.00 0.00 2.92
3694 8697 1.888512 AGTCCGCAAAAGCATTGTCAT 59.111 42.857 4.47 0.00 0.00 3.06
3695 8698 1.317613 AGTCCGCAAAAGCATTGTCA 58.682 45.000 4.47 0.00 0.00 3.58
3696 8699 3.552604 TTAGTCCGCAAAAGCATTGTC 57.447 42.857 4.47 0.00 0.00 3.18
3697 8700 3.426159 CGATTAGTCCGCAAAAGCATTGT 60.426 43.478 4.47 0.00 0.00 2.71
3698 8701 3.100817 CGATTAGTCCGCAAAAGCATTG 58.899 45.455 0.00 0.00 0.00 2.82
3699 8702 2.747446 ACGATTAGTCCGCAAAAGCATT 59.253 40.909 0.00 0.00 0.00 3.56
3700 8703 2.095853 CACGATTAGTCCGCAAAAGCAT 59.904 45.455 0.00 0.00 0.00 3.79
3701 8704 1.463056 CACGATTAGTCCGCAAAAGCA 59.537 47.619 0.00 0.00 0.00 3.91
3702 8705 1.463444 ACACGATTAGTCCGCAAAAGC 59.537 47.619 0.00 0.00 0.00 3.51
3703 8706 2.724839 GCACACGATTAGTCCGCAAAAG 60.725 50.000 0.00 0.00 0.00 2.27
3704 8707 1.195900 GCACACGATTAGTCCGCAAAA 59.804 47.619 0.00 0.00 0.00 2.44
3705 8708 0.793861 GCACACGATTAGTCCGCAAA 59.206 50.000 0.00 0.00 0.00 3.68
3706 8709 0.037697 AGCACACGATTAGTCCGCAA 60.038 50.000 0.00 0.00 31.34 4.85
3707 8710 0.037697 AAGCACACGATTAGTCCGCA 60.038 50.000 0.00 0.00 31.34 5.69
3708 8711 1.076332 AAAGCACACGATTAGTCCGC 58.924 50.000 0.00 0.00 0.00 5.54
3709 8712 2.333926 TCAAAGCACACGATTAGTCCG 58.666 47.619 0.00 0.00 0.00 4.79
3710 8713 2.094417 GCTCAAAGCACACGATTAGTCC 59.906 50.000 0.00 0.00 41.89 3.85
3711 8714 2.996621 AGCTCAAAGCACACGATTAGTC 59.003 45.455 1.29 0.00 45.56 2.59
3712 8715 3.045601 AGCTCAAAGCACACGATTAGT 57.954 42.857 1.29 0.00 45.56 2.24
3713 8716 3.681897 AGAAGCTCAAAGCACACGATTAG 59.318 43.478 1.29 0.00 45.56 1.73
3714 8717 3.664107 AGAAGCTCAAAGCACACGATTA 58.336 40.909 1.29 0.00 45.56 1.75
3715 8718 2.481952 GAGAAGCTCAAAGCACACGATT 59.518 45.455 1.29 0.00 45.56 3.34
3716 8719 2.072298 GAGAAGCTCAAAGCACACGAT 58.928 47.619 1.29 0.00 45.56 3.73
3717 8720 1.202521 TGAGAAGCTCAAAGCACACGA 60.203 47.619 1.29 0.00 45.56 4.35
3718 8721 1.194098 CTGAGAAGCTCAAAGCACACG 59.806 52.381 1.29 0.00 45.56 4.49
3719 8722 2.222911 GTCTGAGAAGCTCAAAGCACAC 59.777 50.000 1.29 0.00 45.56 3.82
3720 8723 2.487934 GTCTGAGAAGCTCAAAGCACA 58.512 47.619 1.29 0.00 45.56 4.57
3721 8724 1.458827 CGTCTGAGAAGCTCAAAGCAC 59.541 52.381 1.29 0.00 45.56 4.40
3722 8725 1.069204 ACGTCTGAGAAGCTCAAAGCA 59.931 47.619 1.29 0.00 45.56 3.91
3723 8726 1.789506 ACGTCTGAGAAGCTCAAAGC 58.210 50.000 0.00 0.00 40.18 3.51
3724 8727 4.802876 AAAACGTCTGAGAAGCTCAAAG 57.197 40.909 0.00 0.00 40.18 2.77
3725 8728 5.118664 CGATAAAACGTCTGAGAAGCTCAAA 59.881 40.000 0.00 0.00 40.18 2.69
3726 8729 4.621460 CGATAAAACGTCTGAGAAGCTCAA 59.379 41.667 0.00 0.00 40.18 3.02
3727 8730 4.166523 CGATAAAACGTCTGAGAAGCTCA 58.833 43.478 0.00 0.00 38.25 4.26
3728 8731 3.000575 GCGATAAAACGTCTGAGAAGCTC 60.001 47.826 0.00 0.00 35.59 4.09
3729 8732 2.924290 GCGATAAAACGTCTGAGAAGCT 59.076 45.455 0.00 0.00 35.59 3.74
3730 8733 2.924290 AGCGATAAAACGTCTGAGAAGC 59.076 45.455 0.00 0.00 35.59 3.86
3731 8734 4.735822 CCTAGCGATAAAACGTCTGAGAAG 59.264 45.833 0.00 0.00 35.59 2.85
3732 8735 4.669318 CCTAGCGATAAAACGTCTGAGAA 58.331 43.478 0.00 0.00 35.59 2.87
3733 8736 3.488721 GCCTAGCGATAAAACGTCTGAGA 60.489 47.826 0.00 0.00 35.59 3.27
3734 8737 2.789893 GCCTAGCGATAAAACGTCTGAG 59.210 50.000 0.00 0.00 35.59 3.35
3735 8738 2.164827 TGCCTAGCGATAAAACGTCTGA 59.835 45.455 0.00 0.00 35.59 3.27
3736 8739 2.281762 GTGCCTAGCGATAAAACGTCTG 59.718 50.000 0.00 0.00 35.59 3.51
3737 8740 2.094390 TGTGCCTAGCGATAAAACGTCT 60.094 45.455 0.00 0.00 35.59 4.18
3738 8741 2.264813 TGTGCCTAGCGATAAAACGTC 58.735 47.619 0.00 0.00 35.59 4.34
3739 8742 2.373540 TGTGCCTAGCGATAAAACGT 57.626 45.000 0.00 0.00 35.59 3.99
3740 8743 2.927477 TCTTGTGCCTAGCGATAAAACG 59.073 45.455 0.00 0.00 0.00 3.60
3741 8744 3.241995 CGTCTTGTGCCTAGCGATAAAAC 60.242 47.826 0.00 0.00 0.00 2.43
3742 8745 2.927477 CGTCTTGTGCCTAGCGATAAAA 59.073 45.455 0.00 0.00 0.00 1.52
3743 8746 2.536365 CGTCTTGTGCCTAGCGATAAA 58.464 47.619 0.00 0.00 0.00 1.40
3744 8747 1.202371 CCGTCTTGTGCCTAGCGATAA 60.202 52.381 0.00 0.00 0.00 1.75
3745 8748 0.384309 CCGTCTTGTGCCTAGCGATA 59.616 55.000 0.00 0.00 0.00 2.92
3746 8749 1.141881 CCGTCTTGTGCCTAGCGAT 59.858 57.895 0.00 0.00 0.00 4.58
3747 8750 1.812686 AACCGTCTTGTGCCTAGCGA 61.813 55.000 0.00 0.00 0.00 4.93
3748 8751 0.949105 AAACCGTCTTGTGCCTAGCG 60.949 55.000 0.00 0.00 0.00 4.26
3749 8752 0.517316 CAAACCGTCTTGTGCCTAGC 59.483 55.000 0.00 0.00 0.00 3.42
3750 8753 1.156736 CCAAACCGTCTTGTGCCTAG 58.843 55.000 0.00 0.00 0.00 3.02
3751 8754 0.470766 ACCAAACCGTCTTGTGCCTA 59.529 50.000 0.00 0.00 0.00 3.93
3752 8755 1.101049 CACCAAACCGTCTTGTGCCT 61.101 55.000 0.00 0.00 0.00 4.75
3753 8756 1.358759 CACCAAACCGTCTTGTGCC 59.641 57.895 0.00 0.00 0.00 5.01
3754 8757 1.299089 GCACCAAACCGTCTTGTGC 60.299 57.895 0.00 0.00 0.00 4.57
3755 8758 1.358759 GGCACCAAACCGTCTTGTG 59.641 57.895 0.00 0.00 0.00 3.33
3756 8759 3.836151 GGCACCAAACCGTCTTGT 58.164 55.556 0.00 0.00 0.00 3.16
3769 8772 1.480954 TCAATAGTCTTCGAGGGGCAC 59.519 52.381 0.00 0.00 0.00 5.01
3770 8773 1.860641 TCAATAGTCTTCGAGGGGCA 58.139 50.000 0.00 0.00 0.00 5.36
3771 8774 2.431057 TCTTCAATAGTCTTCGAGGGGC 59.569 50.000 0.00 0.00 0.00 5.80
3772 8775 3.489398 CGTCTTCAATAGTCTTCGAGGGG 60.489 52.174 0.00 0.00 0.00 4.79
3773 8776 3.489398 CCGTCTTCAATAGTCTTCGAGGG 60.489 52.174 0.00 0.00 0.00 4.30
3774 8777 3.696898 CCGTCTTCAATAGTCTTCGAGG 58.303 50.000 0.00 0.00 0.00 4.63
3775 8778 3.109619 GCCGTCTTCAATAGTCTTCGAG 58.890 50.000 0.00 0.00 0.00 4.04
3776 8779 2.477357 CGCCGTCTTCAATAGTCTTCGA 60.477 50.000 0.00 0.00 0.00 3.71
3777 8780 1.846782 CGCCGTCTTCAATAGTCTTCG 59.153 52.381 0.00 0.00 0.00 3.79
3778 8781 2.877335 ACGCCGTCTTCAATAGTCTTC 58.123 47.619 0.00 0.00 0.00 2.87
3779 8782 3.314541 AACGCCGTCTTCAATAGTCTT 57.685 42.857 0.00 0.00 0.00 3.01
3780 8783 3.314541 AAACGCCGTCTTCAATAGTCT 57.685 42.857 0.00 0.00 0.00 3.24
3781 8784 4.151867 AGAAAAACGCCGTCTTCAATAGTC 59.848 41.667 12.71 0.00 0.00 2.59
3782 8785 4.062991 AGAAAAACGCCGTCTTCAATAGT 58.937 39.130 12.71 0.00 0.00 2.12
3783 8786 4.663636 AGAAAAACGCCGTCTTCAATAG 57.336 40.909 12.71 0.00 0.00 1.73
3784 8787 4.090354 CGTAGAAAAACGCCGTCTTCAATA 59.910 41.667 12.71 0.00 35.87 1.90
3785 8788 3.120786 CGTAGAAAAACGCCGTCTTCAAT 60.121 43.478 12.71 0.00 35.87 2.57
3786 8789 2.219216 CGTAGAAAAACGCCGTCTTCAA 59.781 45.455 12.71 0.00 35.87 2.69
3787 8790 1.788308 CGTAGAAAAACGCCGTCTTCA 59.212 47.619 12.71 0.00 35.87 3.02
3788 8791 1.788886 ACGTAGAAAAACGCCGTCTTC 59.211 47.619 0.00 0.00 46.71 2.87
3789 8792 1.856802 ACGTAGAAAAACGCCGTCTT 58.143 45.000 0.00 0.00 46.71 3.01
3790 8793 1.856802 AACGTAGAAAAACGCCGTCT 58.143 45.000 0.00 0.00 46.71 4.18
3791 8794 2.219445 AGAAACGTAGAAAAACGCCGTC 59.781 45.455 0.00 0.00 46.71 4.79
3792 8795 2.204237 AGAAACGTAGAAAAACGCCGT 58.796 42.857 0.00 0.00 46.71 5.68
3793 8796 2.936050 AGAAACGTAGAAAAACGCCG 57.064 45.000 0.00 0.00 46.71 6.46
3794 8797 3.970610 GGAAAGAAACGTAGAAAAACGCC 59.029 43.478 0.00 0.00 46.71 5.68
3795 8798 3.656266 CGGAAAGAAACGTAGAAAAACGC 59.344 43.478 0.00 0.00 46.71 4.84
3797 8800 4.965762 CACCGGAAAGAAACGTAGAAAAAC 59.034 41.667 9.46 0.00 0.00 2.43
3798 8801 4.035441 CCACCGGAAAGAAACGTAGAAAAA 59.965 41.667 9.46 0.00 0.00 1.94
3799 8802 3.560896 CCACCGGAAAGAAACGTAGAAAA 59.439 43.478 9.46 0.00 0.00 2.29
3800 8803 3.132925 CCACCGGAAAGAAACGTAGAAA 58.867 45.455 9.46 0.00 0.00 2.52
3801 8804 2.364970 TCCACCGGAAAGAAACGTAGAA 59.635 45.455 9.46 0.00 0.00 2.10
3802 8805 1.962807 TCCACCGGAAAGAAACGTAGA 59.037 47.619 9.46 0.00 0.00 2.59
3803 8806 2.443887 TCCACCGGAAAGAAACGTAG 57.556 50.000 9.46 0.00 0.00 3.51
3804 8807 3.405823 AATCCACCGGAAAGAAACGTA 57.594 42.857 9.46 0.00 34.34 3.57
3805 8808 2.265589 AATCCACCGGAAAGAAACGT 57.734 45.000 9.46 0.00 34.34 3.99
3806 8809 2.550606 TCAAATCCACCGGAAAGAAACG 59.449 45.455 9.46 0.00 34.34 3.60
3807 8810 3.568430 ACTCAAATCCACCGGAAAGAAAC 59.432 43.478 9.46 0.00 34.34 2.78
3808 8811 3.818773 GACTCAAATCCACCGGAAAGAAA 59.181 43.478 9.46 0.00 34.34 2.52
3809 8812 3.408634 GACTCAAATCCACCGGAAAGAA 58.591 45.455 9.46 0.00 34.34 2.52
3810 8813 2.611971 CGACTCAAATCCACCGGAAAGA 60.612 50.000 9.46 0.98 34.34 2.52
3811 8814 1.732259 CGACTCAAATCCACCGGAAAG 59.268 52.381 9.46 0.00 34.34 2.62
3812 8815 1.071071 ACGACTCAAATCCACCGGAAA 59.929 47.619 9.46 0.00 34.34 3.13
3813 8816 0.682852 ACGACTCAAATCCACCGGAA 59.317 50.000 9.46 0.00 34.34 4.30
3814 8817 1.475280 CTACGACTCAAATCCACCGGA 59.525 52.381 9.46 0.00 35.55 5.14
3815 8818 1.470979 CCTACGACTCAAATCCACCGG 60.471 57.143 0.00 0.00 0.00 5.28
3816 8819 1.475280 TCCTACGACTCAAATCCACCG 59.525 52.381 0.00 0.00 0.00 4.94
3817 8820 3.604875 TTCCTACGACTCAAATCCACC 57.395 47.619 0.00 0.00 0.00 4.61
3818 8821 3.371285 GCTTTCCTACGACTCAAATCCAC 59.629 47.826 0.00 0.00 0.00 4.02
3819 8822 3.596214 GCTTTCCTACGACTCAAATCCA 58.404 45.455 0.00 0.00 0.00 3.41
3820 8823 2.937149 GGCTTTCCTACGACTCAAATCC 59.063 50.000 0.00 0.00 0.00 3.01
3821 8824 2.603560 CGGCTTTCCTACGACTCAAATC 59.396 50.000 0.00 0.00 0.00 2.17
3822 8825 2.028385 ACGGCTTTCCTACGACTCAAAT 60.028 45.455 0.00 0.00 0.00 2.32
3823 8826 1.342174 ACGGCTTTCCTACGACTCAAA 59.658 47.619 0.00 0.00 0.00 2.69
3824 8827 0.963962 ACGGCTTTCCTACGACTCAA 59.036 50.000 0.00 0.00 0.00 3.02
3825 8828 1.470098 GTACGGCTTTCCTACGACTCA 59.530 52.381 0.00 0.00 0.00 3.41
3826 8829 1.742268 AGTACGGCTTTCCTACGACTC 59.258 52.381 0.00 0.00 0.00 3.36
3827 8830 1.831580 AGTACGGCTTTCCTACGACT 58.168 50.000 0.00 0.00 0.00 4.18
3828 8831 3.978718 ATAGTACGGCTTTCCTACGAC 57.021 47.619 0.00 0.00 0.00 4.34
3829 8832 5.822519 TCTTAATAGTACGGCTTTCCTACGA 59.177 40.000 0.00 0.00 0.00 3.43
3830 8833 6.064846 TCTTAATAGTACGGCTTTCCTACG 57.935 41.667 0.00 0.00 0.00 3.51
3831 8834 6.445475 CCTCTTAATAGTACGGCTTTCCTAC 58.555 44.000 0.00 0.00 0.00 3.18
3832 8835 5.537674 CCCTCTTAATAGTACGGCTTTCCTA 59.462 44.000 0.00 0.00 0.00 2.94
3833 8836 4.344390 CCCTCTTAATAGTACGGCTTTCCT 59.656 45.833 0.00 0.00 0.00 3.36
3834 8837 4.502777 CCCCTCTTAATAGTACGGCTTTCC 60.503 50.000 0.00 0.00 0.00 3.13
3835 8838 4.502777 CCCCCTCTTAATAGTACGGCTTTC 60.503 50.000 0.00 0.00 0.00 2.62
3836 8839 3.390311 CCCCCTCTTAATAGTACGGCTTT 59.610 47.826 0.00 0.00 0.00 3.51
3837 8840 2.970640 CCCCCTCTTAATAGTACGGCTT 59.029 50.000 0.00 0.00 0.00 4.35
3838 8841 2.090887 ACCCCCTCTTAATAGTACGGCT 60.091 50.000 0.00 0.00 0.00 5.52
3839 8842 2.298446 GACCCCCTCTTAATAGTACGGC 59.702 54.545 0.00 0.00 0.00 5.68
3840 8843 2.896044 GGACCCCCTCTTAATAGTACGG 59.104 54.545 0.00 0.00 0.00 4.02
3841 8844 2.555757 CGGACCCCCTCTTAATAGTACG 59.444 54.545 0.00 0.00 0.00 3.67
3842 8845 2.298446 GCGGACCCCCTCTTAATAGTAC 59.702 54.545 0.00 0.00 0.00 2.73
3843 8846 2.178544 AGCGGACCCCCTCTTAATAGTA 59.821 50.000 0.00 0.00 0.00 1.82
3844 8847 1.062352 AGCGGACCCCCTCTTAATAGT 60.062 52.381 0.00 0.00 0.00 2.12
3845 8848 1.718280 AGCGGACCCCCTCTTAATAG 58.282 55.000 0.00 0.00 0.00 1.73
3846 8849 2.044758 GAAGCGGACCCCCTCTTAATA 58.955 52.381 0.00 0.00 37.60 0.98
3847 8850 0.837940 GAAGCGGACCCCCTCTTAAT 59.162 55.000 0.00 0.00 37.60 1.40
3848 8851 1.610554 CGAAGCGGACCCCCTCTTAA 61.611 60.000 0.00 0.00 37.60 1.85
3849 8852 2.056223 CGAAGCGGACCCCCTCTTA 61.056 63.158 0.00 0.00 37.60 2.10
3850 8853 3.391382 CGAAGCGGACCCCCTCTT 61.391 66.667 0.00 0.00 40.02 2.85
3861 8864 2.388232 CCCGAACCTTTCCGAAGCG 61.388 63.158 0.00 0.00 0.00 4.68
3862 8865 1.302271 ACCCGAACCTTTCCGAAGC 60.302 57.895 0.00 0.00 0.00 3.86
3863 8866 0.953960 CCACCCGAACCTTTCCGAAG 60.954 60.000 0.00 0.00 0.00 3.79
3864 8867 1.071814 CCACCCGAACCTTTCCGAA 59.928 57.895 0.00 0.00 0.00 4.30
3865 8868 1.409251 TTCCACCCGAACCTTTCCGA 61.409 55.000 0.00 0.00 0.00 4.55
3866 8869 0.322187 ATTCCACCCGAACCTTTCCG 60.322 55.000 0.00 0.00 31.79 4.30
3867 8870 1.271707 TGATTCCACCCGAACCTTTCC 60.272 52.381 0.00 0.00 31.79 3.13
3868 8871 2.194201 TGATTCCACCCGAACCTTTC 57.806 50.000 0.00 0.00 31.79 2.62
3869 8872 2.041081 TGATGATTCCACCCGAACCTTT 59.959 45.455 0.00 0.00 31.79 3.11
3870 8873 1.633432 TGATGATTCCACCCGAACCTT 59.367 47.619 0.00 0.00 31.79 3.50
3871 8874 1.065418 GTGATGATTCCACCCGAACCT 60.065 52.381 0.00 0.00 31.79 3.50
3872 8875 1.379527 GTGATGATTCCACCCGAACC 58.620 55.000 0.00 0.00 31.79 3.62
3873 8876 1.006832 CGTGATGATTCCACCCGAAC 58.993 55.000 0.00 0.00 31.79 3.95
3874 8877 0.611200 ACGTGATGATTCCACCCGAA 59.389 50.000 0.00 0.00 34.14 4.30
3875 8878 1.135527 GTACGTGATGATTCCACCCGA 59.864 52.381 0.00 0.00 0.00 5.14
3876 8879 1.134936 TGTACGTGATGATTCCACCCG 60.135 52.381 0.00 0.00 0.00 5.28
3877 8880 2.277084 GTGTACGTGATGATTCCACCC 58.723 52.381 0.00 0.00 0.00 4.61
3878 8881 1.924524 CGTGTACGTGATGATTCCACC 59.075 52.381 0.00 0.00 34.11 4.61
3891 8894 2.092211 GCAAAGGATGAGAACGTGTACG 59.908 50.000 2.43 2.43 46.33 3.67
3892 8895 3.064207 TGCAAAGGATGAGAACGTGTAC 58.936 45.455 0.00 0.00 0.00 2.90
3893 8896 3.064207 GTGCAAAGGATGAGAACGTGTA 58.936 45.455 0.00 0.00 0.00 2.90
3894 8897 1.873591 GTGCAAAGGATGAGAACGTGT 59.126 47.619 0.00 0.00 0.00 4.49
3895 8898 1.197721 GGTGCAAAGGATGAGAACGTG 59.802 52.381 0.00 0.00 0.00 4.49
3896 8899 1.523758 GGTGCAAAGGATGAGAACGT 58.476 50.000 0.00 0.00 0.00 3.99
3897 8900 0.443869 CGGTGCAAAGGATGAGAACG 59.556 55.000 0.00 0.00 0.00 3.95
3898 8901 0.169009 GCGGTGCAAAGGATGAGAAC 59.831 55.000 0.00 0.00 0.00 3.01
3899 8902 0.960364 GGCGGTGCAAAGGATGAGAA 60.960 55.000 0.00 0.00 0.00 2.87
3900 8903 1.377202 GGCGGTGCAAAGGATGAGA 60.377 57.895 0.00 0.00 0.00 3.27
3901 8904 0.962356 AAGGCGGTGCAAAGGATGAG 60.962 55.000 0.00 0.00 0.00 2.90
3902 8905 0.539438 AAAGGCGGTGCAAAGGATGA 60.539 50.000 0.00 0.00 0.00 2.92
3903 8906 0.109132 GAAAGGCGGTGCAAAGGATG 60.109 55.000 0.00 0.00 0.00 3.51
3904 8907 1.250840 GGAAAGGCGGTGCAAAGGAT 61.251 55.000 0.00 0.00 0.00 3.24
3905 8908 1.901464 GGAAAGGCGGTGCAAAGGA 60.901 57.895 0.00 0.00 0.00 3.36
3906 8909 1.866853 GAGGAAAGGCGGTGCAAAGG 61.867 60.000 0.00 0.00 0.00 3.11
3907 8910 0.890996 AGAGGAAAGGCGGTGCAAAG 60.891 55.000 0.00 0.00 0.00 2.77
3908 8911 1.150536 AGAGGAAAGGCGGTGCAAA 59.849 52.632 0.00 0.00 0.00 3.68
3909 8912 1.600636 CAGAGGAAAGGCGGTGCAA 60.601 57.895 0.00 0.00 0.00 4.08
3910 8913 2.032528 CAGAGGAAAGGCGGTGCA 59.967 61.111 0.00 0.00 0.00 4.57
3911 8914 2.747855 CCAGAGGAAAGGCGGTGC 60.748 66.667 0.00 0.00 0.00 5.01
3912 8915 2.747855 GCCAGAGGAAAGGCGGTG 60.748 66.667 0.00 0.00 41.70 4.94
3917 8920 3.604582 CTCTAAAGTGCCAGAGGAAAGG 58.395 50.000 0.00 0.00 35.63 3.11
3918 8921 3.006247 GCTCTAAAGTGCCAGAGGAAAG 58.994 50.000 1.18 0.00 38.98 2.62
3919 8922 2.371841 TGCTCTAAAGTGCCAGAGGAAA 59.628 45.455 1.90 0.00 36.45 3.13
3920 8923 1.977854 TGCTCTAAAGTGCCAGAGGAA 59.022 47.619 1.90 0.00 36.45 3.36
3921 8924 1.644509 TGCTCTAAAGTGCCAGAGGA 58.355 50.000 1.90 0.00 38.98 3.71
3922 8925 2.559440 GATGCTCTAAAGTGCCAGAGG 58.441 52.381 1.90 0.00 38.98 3.69
3923 8926 2.170187 AGGATGCTCTAAAGTGCCAGAG 59.830 50.000 1.90 0.00 41.08 3.35
3924 8927 2.169352 GAGGATGCTCTAAAGTGCCAGA 59.831 50.000 7.03 0.00 33.96 3.86
3925 8928 2.559440 GAGGATGCTCTAAAGTGCCAG 58.441 52.381 7.03 0.00 33.96 4.85
3926 8929 1.210478 GGAGGATGCTCTAAAGTGCCA 59.790 52.381 14.40 0.00 33.96 4.92
3927 8930 1.808133 CGGAGGATGCTCTAAAGTGCC 60.808 57.143 14.40 0.00 33.96 5.01
3928 8931 1.134670 ACGGAGGATGCTCTAAAGTGC 60.135 52.381 14.40 0.00 35.32 4.40
3929 8932 2.969628 ACGGAGGATGCTCTAAAGTG 57.030 50.000 14.40 0.71 0.00 3.16
3930 8933 3.983044 AAACGGAGGATGCTCTAAAGT 57.017 42.857 14.40 6.76 0.00 2.66
3931 8934 5.467063 GGATAAAACGGAGGATGCTCTAAAG 59.533 44.000 14.40 6.16 0.00 1.85
3932 8935 5.130477 AGGATAAAACGGAGGATGCTCTAAA 59.870 40.000 14.40 0.00 0.00 1.85
3933 8936 4.654262 AGGATAAAACGGAGGATGCTCTAA 59.346 41.667 14.40 0.00 0.00 2.10
3934 8937 4.223953 AGGATAAAACGGAGGATGCTCTA 58.776 43.478 14.40 0.00 0.00 2.43
3935 8938 3.041946 AGGATAAAACGGAGGATGCTCT 58.958 45.455 14.40 0.00 0.00 4.09
3936 8939 3.070302 AGAGGATAAAACGGAGGATGCTC 59.930 47.826 5.52 5.52 37.12 4.26
3937 8940 3.041946 AGAGGATAAAACGGAGGATGCT 58.958 45.455 0.00 0.00 0.00 3.79
3938 8941 3.477210 AGAGGATAAAACGGAGGATGC 57.523 47.619 0.00 0.00 0.00 3.91
3939 8942 4.932200 GCATAGAGGATAAAACGGAGGATG 59.068 45.833 0.00 0.00 0.00 3.51
3940 8943 4.593206 TGCATAGAGGATAAAACGGAGGAT 59.407 41.667 0.00 0.00 0.00 3.24
3941 8944 3.964688 TGCATAGAGGATAAAACGGAGGA 59.035 43.478 0.00 0.00 0.00 3.71
3942 8945 4.336889 TGCATAGAGGATAAAACGGAGG 57.663 45.455 0.00 0.00 0.00 4.30
3943 8946 6.146837 CAGAATGCATAGAGGATAAAACGGAG 59.853 42.308 0.00 0.00 0.00 4.63
3944 8947 5.991606 CAGAATGCATAGAGGATAAAACGGA 59.008 40.000 0.00 0.00 0.00 4.69
3945 8948 5.760253 ACAGAATGCATAGAGGATAAAACGG 59.240 40.000 0.00 0.00 42.53 4.44
3946 8949 6.703607 AGACAGAATGCATAGAGGATAAAACG 59.296 38.462 0.00 0.00 42.53 3.60
3947 8950 8.341173 CAAGACAGAATGCATAGAGGATAAAAC 58.659 37.037 0.00 0.00 42.53 2.43
3948 8951 7.500227 CCAAGACAGAATGCATAGAGGATAAAA 59.500 37.037 0.00 0.00 42.53 1.52
3949 8952 6.994496 CCAAGACAGAATGCATAGAGGATAAA 59.006 38.462 0.00 0.00 42.53 1.40
3950 8953 6.100279 ACCAAGACAGAATGCATAGAGGATAA 59.900 38.462 0.00 0.00 42.53 1.75
3951 8954 5.604231 ACCAAGACAGAATGCATAGAGGATA 59.396 40.000 0.00 0.00 42.53 2.59
3952 8955 4.411540 ACCAAGACAGAATGCATAGAGGAT 59.588 41.667 0.00 0.00 42.53 3.24
3953 8956 3.776969 ACCAAGACAGAATGCATAGAGGA 59.223 43.478 0.00 0.00 42.53 3.71
3954 8957 4.148128 ACCAAGACAGAATGCATAGAGG 57.852 45.455 0.00 0.00 42.53 3.69
3955 8958 4.201891 GCAACCAAGACAGAATGCATAGAG 60.202 45.833 0.00 0.00 42.53 2.43
3956 8959 3.691118 GCAACCAAGACAGAATGCATAGA 59.309 43.478 0.00 0.00 42.53 1.98
3957 8960 3.693085 AGCAACCAAGACAGAATGCATAG 59.307 43.478 0.00 0.00 42.53 2.23
3958 8961 3.441222 CAGCAACCAAGACAGAATGCATA 59.559 43.478 0.00 0.00 42.53 3.14
3959 8962 2.230508 CAGCAACCAAGACAGAATGCAT 59.769 45.455 0.00 0.00 42.53 3.96
3960 8963 1.610038 CAGCAACCAAGACAGAATGCA 59.390 47.619 0.00 0.00 42.53 3.96
3961 8964 1.881973 TCAGCAACCAAGACAGAATGC 59.118 47.619 0.00 0.00 42.53 3.56
3962 8965 4.940046 AGTATCAGCAACCAAGACAGAATG 59.060 41.667 0.00 0.00 46.00 2.67
3963 8966 4.940046 CAGTATCAGCAACCAAGACAGAAT 59.060 41.667 0.00 0.00 0.00 2.40
3964 8967 4.318332 CAGTATCAGCAACCAAGACAGAA 58.682 43.478 0.00 0.00 0.00 3.02
3965 8968 3.306989 CCAGTATCAGCAACCAAGACAGA 60.307 47.826 0.00 0.00 0.00 3.41
3966 8969 3.005554 CCAGTATCAGCAACCAAGACAG 58.994 50.000 0.00 0.00 0.00 3.51
3967 8970 2.290260 CCCAGTATCAGCAACCAAGACA 60.290 50.000 0.00 0.00 0.00 3.41
3968 8971 2.359900 CCCAGTATCAGCAACCAAGAC 58.640 52.381 0.00 0.00 0.00 3.01
3969 8972 1.340017 GCCCAGTATCAGCAACCAAGA 60.340 52.381 0.00 0.00 0.00 3.02
3970 8973 1.098050 GCCCAGTATCAGCAACCAAG 58.902 55.000 0.00 0.00 0.00 3.61
3971 8974 0.698238 AGCCCAGTATCAGCAACCAA 59.302 50.000 0.00 0.00 0.00 3.67
3972 8975 0.698238 AAGCCCAGTATCAGCAACCA 59.302 50.000 0.00 0.00 0.00 3.67
3973 8976 1.098050 CAAGCCCAGTATCAGCAACC 58.902 55.000 0.00 0.00 0.00 3.77
3974 8977 0.453390 GCAAGCCCAGTATCAGCAAC 59.547 55.000 0.00 0.00 0.00 4.17
3975 8978 1.026182 CGCAAGCCCAGTATCAGCAA 61.026 55.000 0.00 0.00 0.00 3.91
3976 8979 1.450134 CGCAAGCCCAGTATCAGCA 60.450 57.895 0.00 0.00 0.00 4.41
3977 8980 2.182842 CCGCAAGCCCAGTATCAGC 61.183 63.158 0.00 0.00 0.00 4.26
3978 8981 0.464036 TACCGCAAGCCCAGTATCAG 59.536 55.000 0.00 0.00 0.00 2.90
3979 8982 0.464036 CTACCGCAAGCCCAGTATCA 59.536 55.000 0.00 0.00 0.00 2.15
3980 8983 0.464452 ACTACCGCAAGCCCAGTATC 59.536 55.000 0.00 0.00 0.00 2.24
3981 8984 1.411612 GTACTACCGCAAGCCCAGTAT 59.588 52.381 0.00 0.00 0.00 2.12
3982 8985 0.819582 GTACTACCGCAAGCCCAGTA 59.180 55.000 0.00 0.00 0.00 2.74
3983 8986 0.903454 AGTACTACCGCAAGCCCAGT 60.903 55.000 0.00 0.00 0.00 4.00
3984 8987 0.460284 CAGTACTACCGCAAGCCCAG 60.460 60.000 0.00 0.00 0.00 4.45
3985 8988 1.594833 CAGTACTACCGCAAGCCCA 59.405 57.895 0.00 0.00 0.00 5.36
3986 8989 1.814169 GCAGTACTACCGCAAGCCC 60.814 63.158 0.00 0.00 0.00 5.19
3987 8990 0.806492 GAGCAGTACTACCGCAAGCC 60.806 60.000 6.47 0.00 0.00 4.35
3988 8991 0.806492 GGAGCAGTACTACCGCAAGC 60.806 60.000 6.47 0.00 0.00 4.01
3989 8992 0.818296 AGGAGCAGTACTACCGCAAG 59.182 55.000 6.47 0.00 0.00 4.01
3990 8993 0.530744 CAGGAGCAGTACTACCGCAA 59.469 55.000 6.47 0.00 0.00 4.85
3991 8994 1.320344 CCAGGAGCAGTACTACCGCA 61.320 60.000 6.47 0.00 0.00 5.69
3992 8995 1.035932 TCCAGGAGCAGTACTACCGC 61.036 60.000 0.00 0.00 0.00 5.68
3993 8996 1.405821 CTTCCAGGAGCAGTACTACCG 59.594 57.143 0.00 0.00 0.00 4.02
3994 8997 1.137282 GCTTCCAGGAGCAGTACTACC 59.863 57.143 0.00 0.00 42.25 3.18
3995 8998 1.202313 CGCTTCCAGGAGCAGTACTAC 60.202 57.143 0.00 0.00 42.83 2.73
3996 8999 1.103803 CGCTTCCAGGAGCAGTACTA 58.896 55.000 0.00 0.00 42.83 1.82
3997 9000 1.608717 CCGCTTCCAGGAGCAGTACT 61.609 60.000 10.44 0.00 42.83 2.73
3998 9001 1.153549 CCGCTTCCAGGAGCAGTAC 60.154 63.158 10.44 0.00 42.83 2.73
3999 9002 0.323999 TACCGCTTCCAGGAGCAGTA 60.324 55.000 10.44 7.11 42.83 2.74
4000 9003 1.608717 CTACCGCTTCCAGGAGCAGT 61.609 60.000 10.44 7.90 42.83 4.40
4001 9004 1.142748 CTACCGCTTCCAGGAGCAG 59.857 63.158 10.44 0.00 42.83 4.24
4002 9005 0.323999 TACTACCGCTTCCAGGAGCA 60.324 55.000 10.44 0.00 42.83 4.26
4003 9006 0.102663 GTACTACCGCTTCCAGGAGC 59.897 60.000 0.00 0.00 39.29 4.70
4004 9007 0.745468 GGTACTACCGCTTCCAGGAG 59.255 60.000 0.00 0.00 0.00 3.69
4005 9008 2.892025 GGTACTACCGCTTCCAGGA 58.108 57.895 0.00 0.00 0.00 3.86
4023 9026 1.028330 TACTACTGCACCGAGGTCCG 61.028 60.000 0.00 0.00 38.18 4.79
4024 9027 0.455005 GTACTACTGCACCGAGGTCC 59.545 60.000 0.00 0.00 0.00 4.46
4025 9028 0.455005 GGTACTACTGCACCGAGGTC 59.545 60.000 0.00 0.00 0.00 3.85
4026 9029 2.576298 GGTACTACTGCACCGAGGT 58.424 57.895 0.00 0.00 0.00 3.85
4035 9038 1.153628 GGCACCTGCGGTACTACTG 60.154 63.158 0.00 0.00 43.26 2.74
4036 9039 3.295800 GGCACCTGCGGTACTACT 58.704 61.111 0.00 0.00 43.26 2.57
4057 9060 0.106819 TCCTGAGGAGCGGTACTACC 60.107 60.000 0.00 0.00 34.05 3.18
4058 9061 1.310904 CTCCTGAGGAGCGGTACTAC 58.689 60.000 16.73 0.00 43.29 2.73
4059 9062 3.802862 CTCCTGAGGAGCGGTACTA 57.197 57.895 16.73 0.00 43.29 1.82
4060 9063 4.668151 CTCCTGAGGAGCGGTACT 57.332 61.111 16.73 0.00 43.29 2.73
4068 9071 1.408405 CGGTACTACAGCTCCTGAGGA 60.408 57.143 0.00 0.00 35.18 3.71
4069 9072 1.025812 CGGTACTACAGCTCCTGAGG 58.974 60.000 0.00 0.00 35.18 3.86
4070 9073 1.402259 CACGGTACTACAGCTCCTGAG 59.598 57.143 0.00 0.00 35.18 3.35
4071 9074 1.460504 CACGGTACTACAGCTCCTGA 58.539 55.000 0.00 0.00 35.18 3.86
4072 9075 0.456221 CCACGGTACTACAGCTCCTG 59.544 60.000 0.00 0.00 37.52 3.86
4073 9076 1.321074 GCCACGGTACTACAGCTCCT 61.321 60.000 0.00 0.00 0.00 3.69
4074 9077 1.141234 GCCACGGTACTACAGCTCC 59.859 63.158 0.00 0.00 0.00 4.70
4075 9078 1.141234 GGCCACGGTACTACAGCTC 59.859 63.158 0.00 0.00 0.00 4.09
4076 9079 2.356780 GGGCCACGGTACTACAGCT 61.357 63.158 4.39 0.00 0.00 4.24
4077 9080 2.186125 GGGCCACGGTACTACAGC 59.814 66.667 4.39 0.00 0.00 4.40
4078 9081 2.728435 GGGGGCCACGGTACTACAG 61.728 68.421 4.39 0.00 0.00 2.74
4079 9082 2.684655 GGGGGCCACGGTACTACA 60.685 66.667 4.39 0.00 0.00 2.74
4080 9083 2.684655 TGGGGGCCACGGTACTAC 60.685 66.667 4.39 0.00 0.00 2.73
4081 9084 2.364579 CTGGGGGCCACGGTACTA 60.365 66.667 6.40 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.