Multiple sequence alignment - TraesCS6D01G114000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6D01G114000 chr6D 100.000 4757 0 0 1 4757 81384966 81380210 0.000000e+00 8785.0
1 TraesCS6D01G114000 chr1D 91.419 2762 170 26 1844 4574 12528313 12531038 0.000000e+00 3725.0
2 TraesCS6D01G114000 chr1D 89.333 900 58 16 2961 3848 21865907 21865034 0.000000e+00 1096.0
3 TraesCS6D01G114000 chr1D 91.916 668 25 13 3839 4495 21864311 21863662 0.000000e+00 907.0
4 TraesCS6D01G114000 chr1D 86.770 771 28 25 1122 1833 21867859 21867104 0.000000e+00 791.0
5 TraesCS6D01G114000 chr1D 93.681 364 14 3 1834 2193 21866648 21866290 1.950000e-148 536.0
6 TraesCS6D01G114000 chr1D 85.765 281 15 10 4502 4757 21863616 21863336 1.690000e-69 274.0
7 TraesCS6D01G114000 chr1D 88.789 223 19 2 2752 2969 21866293 21866072 7.850000e-68 268.0
8 TraesCS6D01G114000 chr1D 94.444 162 9 0 4596 4757 12531089 12531250 2.840000e-62 250.0
9 TraesCS6D01G114000 chr1D 93.421 76 0 2 3 74 21867974 21867900 1.810000e-19 108.0
10 TraesCS6D01G114000 chr1B 94.754 1544 59 11 307 1832 38070424 38068885 0.000000e+00 2383.0
11 TraesCS6D01G114000 chr1B 93.673 1138 54 9 3371 4495 38068207 38067075 0.000000e+00 1687.0
12 TraesCS6D01G114000 chr1B 93.023 645 31 7 4064 4697 17893819 17893178 0.000000e+00 929.0
13 TraesCS6D01G114000 chr1B 94.249 313 13 2 3 310 38070843 38070531 1.550000e-129 473.0
14 TraesCS6D01G114000 chr1B 93.532 201 8 1 1834 2034 38068416 38068221 1.290000e-75 294.0
15 TraesCS6D01G114000 chr1B 86.331 278 16 10 4502 4757 38067029 38066752 2.800000e-72 283.0
16 TraesCS6D01G114000 chr1B 76.238 202 24 17 4356 4551 539937528 539937345 8.480000e-13 86.1
17 TraesCS6D01G114000 chr1A 91.346 1560 91 24 2961 4495 23181604 23180064 0.000000e+00 2093.0
18 TraesCS6D01G114000 chr1A 91.001 1089 76 10 1889 2969 23182843 23181769 0.000000e+00 1448.0
19 TraesCS6D01G114000 chr1A 91.448 725 35 8 643 1355 23185590 23184881 0.000000e+00 970.0
20 TraesCS6D01G114000 chr1A 88.498 313 11 9 3 310 23188006 23187714 5.860000e-94 355.0
21 TraesCS6D01G114000 chr1A 86.486 333 17 10 1528 1832 23184881 23184549 1.640000e-89 340.0
22 TraesCS6D01G114000 chr1A 83.274 281 18 8 306 586 23187605 23187354 1.030000e-56 231.0
23 TraesCS6D01G114000 chr1A 82.902 193 15 9 4521 4695 23179992 23179800 1.770000e-34 158.0
24 TraesCS6D01G114000 chr1A 97.143 35 1 0 4723 4757 23179805 23179771 5.140000e-05 60.2
25 TraesCS6D01G114000 chr7A 75.769 260 50 12 1910 2166 39002543 39002792 8.360000e-23 119.0
26 TraesCS6D01G114000 chr4A 90.769 65 6 0 1910 1974 643689055 643689119 2.360000e-13 87.9
27 TraesCS6D01G114000 chr4A 90.769 65 6 0 1910 1974 643784956 643785020 2.360000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6D01G114000 chr6D 81380210 81384966 4756 True 8785.000000 8785 100.000000 1 4757 1 chr6D.!!$R1 4756
1 TraesCS6D01G114000 chr1D 12528313 12531250 2937 False 1987.500000 3725 92.931500 1844 4757 2 chr1D.!!$F1 2913
2 TraesCS6D01G114000 chr1D 21863336 21867974 4638 True 568.571429 1096 89.953571 3 4757 7 chr1D.!!$R1 4754
3 TraesCS6D01G114000 chr1B 38066752 38070843 4091 True 1024.000000 2383 92.507800 3 4757 5 chr1B.!!$R3 4754
4 TraesCS6D01G114000 chr1B 17893178 17893819 641 True 929.000000 929 93.023000 4064 4697 1 chr1B.!!$R1 633
5 TraesCS6D01G114000 chr1A 23179771 23188006 8235 True 706.900000 2093 89.012250 3 4757 8 chr1A.!!$R1 4754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
880 2734 0.305922 GCGTCATATCCTTGCAGTGC 59.694 55.0 8.58 8.58 0.0 4.40 F
1077 2936 0.108585 ACACGAGCACCATGGAGTTT 59.891 50.0 21.47 3.12 0.0 2.66 F
1290 3163 0.250338 GGAAGTGCGAGAAGGGTGTT 60.250 55.0 0.00 0.00 0.0 3.32 F
2357 6532 0.251341 ATCTGTGGTGGGAAGGTTGC 60.251 55.0 0.00 0.00 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2338 6513 0.251341 GCAACCTTCCCACCACAGAT 60.251 55.000 0.0 0.0 0.0 2.90 R
2907 7087 0.109039 GAAGCAGGACGAGGACAGAC 60.109 60.000 0.0 0.0 0.0 3.51 R
2917 7097 1.004745 TGGGATTGAAGGAAGCAGGAC 59.995 52.381 0.0 0.0 0.0 3.85 R
3776 8144 0.038744 CTTCCCTCCTGGCAATGTGT 59.961 55.000 0.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 100 1.621822 TCCCTACCCCTCGACCTCT 60.622 63.158 0.00 0.00 0.00 3.69
96 101 1.219824 TCCCTACCCCTCGACCTCTT 61.220 60.000 0.00 0.00 0.00 2.85
305 311 3.758931 GCGGTGGTGGGGATTTGC 61.759 66.667 0.00 0.00 0.00 3.68
313 432 2.123726 GGGGATTTGCGGATGGCT 60.124 61.111 0.00 0.00 44.05 4.75
340 459 1.009335 CAATGCGGCCATCATCACG 60.009 57.895 2.24 0.00 0.00 4.35
364 483 1.128724 CACTGCACGACGACGATCTC 61.129 60.000 15.32 0.54 42.66 2.75
478 597 1.497722 CTTCCTCAAACGCTTCCGC 59.502 57.895 0.00 0.00 38.22 5.54
534 653 1.202087 CGTGGACAACAAAAACGAGCA 60.202 47.619 0.00 0.00 36.38 4.26
535 654 2.540769 CGTGGACAACAAAAACGAGCAT 60.541 45.455 0.00 0.00 36.38 3.79
536 655 2.788786 GTGGACAACAAAAACGAGCATG 59.211 45.455 0.00 0.00 0.00 4.06
760 2614 2.476051 CGCACGCATCTTGACCAC 59.524 61.111 0.00 0.00 0.00 4.16
761 2615 2.476051 GCACGCATCTTGACCACG 59.524 61.111 0.00 0.00 0.00 4.94
880 2734 0.305922 GCGTCATATCCTTGCAGTGC 59.694 55.000 8.58 8.58 0.00 4.40
911 2765 2.499693 TCCAGATTCAATGTACGAGCCA 59.500 45.455 0.00 0.00 0.00 4.75
1044 2903 1.503542 GCAAACTGATGTCGCCAGG 59.496 57.895 0.00 0.00 36.03 4.45
1045 2904 1.503542 CAAACTGATGTCGCCAGGC 59.496 57.895 0.00 0.00 36.03 4.85
1077 2936 0.108585 ACACGAGCACCATGGAGTTT 59.891 50.000 21.47 3.12 0.00 2.66
1120 2979 4.538738 GGAGATAGTCTCTACCAGTTGGT 58.461 47.826 9.09 9.09 44.62 3.67
1212 3075 2.971330 AGATGGCTTCATAGTGGAGGAG 59.029 50.000 3.03 0.00 0.00 3.69
1243 3116 2.303022 CTGGAAGTCTGGGCACTAAAGA 59.697 50.000 0.00 0.00 0.00 2.52
1254 3127 4.538490 TGGGCACTAAAGAAGGAGGATAAA 59.462 41.667 0.00 0.00 0.00 1.40
1259 3132 6.655425 GCACTAAAGAAGGAGGATAAACAAGT 59.345 38.462 0.00 0.00 0.00 3.16
1290 3163 0.250338 GGAAGTGCGAGAAGGGTGTT 60.250 55.000 0.00 0.00 0.00 3.32
1406 3287 4.953667 TCCTATGCTATTGACTTGCAGAG 58.046 43.478 0.00 0.00 42.28 3.35
1452 3333 6.143206 TGAGTCTGGTGGAGATATTTATCCA 58.857 40.000 0.00 0.00 43.34 3.41
1541 3428 4.532521 AGCCAACCTGTCTAATGAGTAAGT 59.467 41.667 0.00 0.00 0.00 2.24
1618 3514 5.744345 GGTGACATGTATCTTCTCTTGTACG 59.256 44.000 0.00 0.00 0.00 3.67
1630 3528 8.789825 TCTTCTCTTGTACGTTTATAGAGACT 57.210 34.615 14.83 0.00 40.59 3.24
1634 3532 6.320171 TCTTGTACGTTTATAGAGACTGTGC 58.680 40.000 0.00 0.00 0.00 4.57
1637 3535 4.017380 ACGTTTATAGAGACTGTGCTCG 57.983 45.455 0.00 0.00 39.87 5.03
1805 3729 2.307392 ACCCATGTTACCTGTATGTGCA 59.693 45.455 0.00 0.00 0.00 4.57
1880 5490 0.930726 GGGGAAATGGGGTGGATGTA 59.069 55.000 0.00 0.00 0.00 2.29
1883 5493 1.569072 GGAAATGGGGTGGATGTACCT 59.431 52.381 0.00 0.00 40.66 3.08
1884 5494 2.024369 GGAAATGGGGTGGATGTACCTT 60.024 50.000 0.00 0.00 40.66 3.50
1885 5495 3.203487 GGAAATGGGGTGGATGTACCTTA 59.797 47.826 0.00 0.00 40.66 2.69
1886 5496 4.141018 GGAAATGGGGTGGATGTACCTTAT 60.141 45.833 0.00 0.00 40.66 1.73
1887 5497 5.454966 GAAATGGGGTGGATGTACCTTATT 58.545 41.667 0.00 0.00 40.66 1.40
1956 5570 4.400884 TGTTCCTTATGTTTGTGTTGTGCT 59.599 37.500 0.00 0.00 0.00 4.40
2167 5781 1.768275 TCCCTTCTGAAAGCTGTGACA 59.232 47.619 0.00 0.00 0.00 3.58
2199 6374 8.928270 TTCTAGAAGATAAATCTGAAACCGAC 57.072 34.615 0.00 0.00 37.19 4.79
2200 6375 8.063200 TCTAGAAGATAAATCTGAAACCGACA 57.937 34.615 0.00 0.00 37.19 4.35
2201 6376 8.191446 TCTAGAAGATAAATCTGAAACCGACAG 58.809 37.037 0.00 0.00 37.19 3.51
2202 6377 5.582665 AGAAGATAAATCTGAAACCGACAGC 59.417 40.000 0.00 0.00 37.19 4.40
2203 6378 4.192317 AGATAAATCTGAAACCGACAGCC 58.808 43.478 0.00 0.00 35.42 4.85
2204 6379 2.568623 AAATCTGAAACCGACAGCCT 57.431 45.000 0.00 0.00 35.61 4.58
2205 6380 1.813513 AATCTGAAACCGACAGCCTG 58.186 50.000 0.00 0.00 35.61 4.85
2206 6381 0.674895 ATCTGAAACCGACAGCCTGC 60.675 55.000 0.00 0.00 35.61 4.85
2207 6382 2.281484 TGAAACCGACAGCCTGCC 60.281 61.111 0.00 0.00 0.00 4.85
2208 6383 2.281484 GAAACCGACAGCCTGCCA 60.281 61.111 0.00 0.00 0.00 4.92
2209 6384 1.896660 GAAACCGACAGCCTGCCAA 60.897 57.895 0.00 0.00 0.00 4.52
2210 6385 1.452145 GAAACCGACAGCCTGCCAAA 61.452 55.000 0.00 0.00 0.00 3.28
2211 6386 1.455383 AAACCGACAGCCTGCCAAAG 61.455 55.000 0.00 0.00 0.00 2.77
2212 6387 2.032528 CCGACAGCCTGCCAAAGA 59.967 61.111 0.00 0.00 0.00 2.52
2213 6388 1.600636 CCGACAGCCTGCCAAAGAA 60.601 57.895 0.00 0.00 0.00 2.52
2214 6389 0.962356 CCGACAGCCTGCCAAAGAAT 60.962 55.000 0.00 0.00 0.00 2.40
2215 6390 1.678728 CCGACAGCCTGCCAAAGAATA 60.679 52.381 0.00 0.00 0.00 1.75
2216 6391 1.398390 CGACAGCCTGCCAAAGAATAC 59.602 52.381 0.00 0.00 0.00 1.89
2217 6392 2.716217 GACAGCCTGCCAAAGAATACT 58.284 47.619 0.00 0.00 0.00 2.12
2218 6393 3.678806 CGACAGCCTGCCAAAGAATACTA 60.679 47.826 0.00 0.00 0.00 1.82
2219 6394 3.610911 ACAGCCTGCCAAAGAATACTAC 58.389 45.455 0.00 0.00 0.00 2.73
2220 6395 3.009033 ACAGCCTGCCAAAGAATACTACA 59.991 43.478 0.00 0.00 0.00 2.74
2221 6396 3.624861 CAGCCTGCCAAAGAATACTACAG 59.375 47.826 0.00 0.00 0.00 2.74
2222 6397 3.519510 AGCCTGCCAAAGAATACTACAGA 59.480 43.478 0.00 0.00 0.00 3.41
2223 6398 4.019321 AGCCTGCCAAAGAATACTACAGAA 60.019 41.667 0.00 0.00 0.00 3.02
2224 6399 4.333926 GCCTGCCAAAGAATACTACAGAAG 59.666 45.833 0.00 0.00 0.00 2.85
2225 6400 5.734720 CCTGCCAAAGAATACTACAGAAGA 58.265 41.667 0.00 0.00 0.00 2.87
2226 6401 6.352516 CCTGCCAAAGAATACTACAGAAGAT 58.647 40.000 0.00 0.00 0.00 2.40
2227 6402 7.500992 CCTGCCAAAGAATACTACAGAAGATA 58.499 38.462 0.00 0.00 0.00 1.98
2228 6403 7.439655 CCTGCCAAAGAATACTACAGAAGATAC 59.560 40.741 0.00 0.00 0.00 2.24
2229 6404 8.079211 TGCCAAAGAATACTACAGAAGATACT 57.921 34.615 0.00 0.00 0.00 2.12
2230 6405 7.981789 TGCCAAAGAATACTACAGAAGATACTG 59.018 37.037 0.00 0.00 42.78 2.74
2231 6406 8.198109 GCCAAAGAATACTACAGAAGATACTGA 58.802 37.037 0.00 0.00 40.63 3.41
2239 6414 9.823647 ATACTACAGAAGATACTGAAATGTTGG 57.176 33.333 0.00 0.00 40.63 3.77
2240 6415 7.907389 ACTACAGAAGATACTGAAATGTTGGA 58.093 34.615 0.00 0.00 40.63 3.53
2241 6416 8.037758 ACTACAGAAGATACTGAAATGTTGGAG 58.962 37.037 0.00 0.00 40.63 3.86
2242 6417 5.645497 ACAGAAGATACTGAAATGTTGGAGC 59.355 40.000 0.00 0.00 40.63 4.70
2243 6418 5.645067 CAGAAGATACTGAAATGTTGGAGCA 59.355 40.000 0.00 0.00 39.94 4.26
2244 6419 6.149973 CAGAAGATACTGAAATGTTGGAGCAA 59.850 38.462 0.00 0.00 39.94 3.91
2245 6420 5.886960 AGATACTGAAATGTTGGAGCAAC 57.113 39.130 0.00 0.00 43.78 4.17
2259 6434 6.741992 TTGGAGCAACAACATAGTGATAAG 57.258 37.500 0.00 0.00 0.00 1.73
2260 6435 5.185454 TGGAGCAACAACATAGTGATAAGG 58.815 41.667 0.00 0.00 0.00 2.69
2261 6436 4.035675 GGAGCAACAACATAGTGATAAGGC 59.964 45.833 0.00 0.00 0.00 4.35
2262 6437 4.848357 AGCAACAACATAGTGATAAGGCT 58.152 39.130 0.00 0.00 0.00 4.58
2263 6438 4.878397 AGCAACAACATAGTGATAAGGCTC 59.122 41.667 0.00 0.00 0.00 4.70
2264 6439 4.635765 GCAACAACATAGTGATAAGGCTCA 59.364 41.667 0.00 0.00 0.00 4.26
2265 6440 5.447818 GCAACAACATAGTGATAAGGCTCAC 60.448 44.000 0.00 0.00 44.78 3.51
2266 6441 5.420725 ACAACATAGTGATAAGGCTCACA 57.579 39.130 7.93 0.00 46.45 3.58
2267 6442 5.994250 ACAACATAGTGATAAGGCTCACAT 58.006 37.500 7.93 0.00 46.45 3.21
2268 6443 7.124573 ACAACATAGTGATAAGGCTCACATA 57.875 36.000 7.93 0.00 46.45 2.29
2269 6444 7.212976 ACAACATAGTGATAAGGCTCACATAG 58.787 38.462 7.93 0.44 46.45 2.23
2270 6445 7.069950 ACAACATAGTGATAAGGCTCACATAGA 59.930 37.037 7.93 0.00 46.45 1.98
2271 6446 7.603180 ACATAGTGATAAGGCTCACATAGAA 57.397 36.000 7.93 0.00 46.45 2.10
2272 6447 7.665690 ACATAGTGATAAGGCTCACATAGAAG 58.334 38.462 7.93 0.00 46.45 2.85
2273 6448 7.288852 ACATAGTGATAAGGCTCACATAGAAGT 59.711 37.037 7.93 0.00 46.45 3.01
2274 6449 6.155475 AGTGATAAGGCTCACATAGAAGTC 57.845 41.667 7.93 0.00 46.45 3.01
2275 6450 5.658634 AGTGATAAGGCTCACATAGAAGTCA 59.341 40.000 7.93 0.00 46.45 3.41
2276 6451 5.982516 GTGATAAGGCTCACATAGAAGTCAG 59.017 44.000 0.91 0.00 44.03 3.51
2277 6452 5.658634 TGATAAGGCTCACATAGAAGTCAGT 59.341 40.000 0.00 0.00 0.00 3.41
2278 6453 4.899352 AAGGCTCACATAGAAGTCAGTT 57.101 40.909 0.00 0.00 0.00 3.16
2279 6454 4.199432 AGGCTCACATAGAAGTCAGTTG 57.801 45.455 0.00 0.00 0.00 3.16
2280 6455 3.580458 AGGCTCACATAGAAGTCAGTTGT 59.420 43.478 0.00 0.00 0.00 3.32
2281 6456 3.681897 GGCTCACATAGAAGTCAGTTGTG 59.318 47.826 0.00 0.00 39.16 3.33
2282 6457 3.124297 GCTCACATAGAAGTCAGTTGTGC 59.876 47.826 0.00 0.00 38.02 4.57
2283 6458 3.664107 TCACATAGAAGTCAGTTGTGCC 58.336 45.455 0.00 0.00 38.02 5.01
2284 6459 2.413112 CACATAGAAGTCAGTTGTGCCG 59.587 50.000 0.00 0.00 32.24 5.69
2285 6460 2.299013 ACATAGAAGTCAGTTGTGCCGA 59.701 45.455 0.00 0.00 0.00 5.54
2286 6461 2.433868 TAGAAGTCAGTTGTGCCGAC 57.566 50.000 0.00 0.00 0.00 4.79
2287 6462 0.464036 AGAAGTCAGTTGTGCCGACA 59.536 50.000 0.00 0.00 31.92 4.35
2288 6463 1.134521 AGAAGTCAGTTGTGCCGACAA 60.135 47.619 0.00 0.00 39.88 3.18
2289 6464 1.668751 GAAGTCAGTTGTGCCGACAAA 59.331 47.619 0.00 0.00 43.77 2.83
2290 6465 1.745232 AGTCAGTTGTGCCGACAAAA 58.255 45.000 0.00 0.00 43.77 2.44
2291 6466 2.297701 AGTCAGTTGTGCCGACAAAAT 58.702 42.857 0.00 0.00 43.77 1.82
2292 6467 2.033299 AGTCAGTTGTGCCGACAAAATG 59.967 45.455 0.00 0.00 43.77 2.32
2293 6468 2.032799 GTCAGTTGTGCCGACAAAATGA 59.967 45.455 0.00 0.00 43.77 2.57
2294 6469 2.290367 TCAGTTGTGCCGACAAAATGAG 59.710 45.455 0.00 0.00 43.77 2.90
2295 6470 2.033299 CAGTTGTGCCGACAAAATGAGT 59.967 45.455 0.00 0.00 43.77 3.41
2296 6471 2.033299 AGTTGTGCCGACAAAATGAGTG 59.967 45.455 0.00 0.00 43.77 3.51
2297 6472 1.960417 TGTGCCGACAAAATGAGTGA 58.040 45.000 0.00 0.00 0.00 3.41
2298 6473 2.293170 TGTGCCGACAAAATGAGTGAA 58.707 42.857 0.00 0.00 0.00 3.18
2299 6474 2.290367 TGTGCCGACAAAATGAGTGAAG 59.710 45.455 0.00 0.00 0.00 3.02
2300 6475 2.290641 GTGCCGACAAAATGAGTGAAGT 59.709 45.455 0.00 0.00 0.00 3.01
2301 6476 2.290367 TGCCGACAAAATGAGTGAAGTG 59.710 45.455 0.00 0.00 0.00 3.16
2302 6477 2.918131 GCCGACAAAATGAGTGAAGTGC 60.918 50.000 0.00 0.00 0.00 4.40
2303 6478 2.549754 CCGACAAAATGAGTGAAGTGCT 59.450 45.455 0.00 0.00 0.00 4.40
2304 6479 3.364366 CCGACAAAATGAGTGAAGTGCTC 60.364 47.826 0.00 0.00 0.00 4.26
2305 6480 3.496130 CGACAAAATGAGTGAAGTGCTCT 59.504 43.478 0.00 0.00 34.30 4.09
2306 6481 4.686091 CGACAAAATGAGTGAAGTGCTCTA 59.314 41.667 0.00 0.00 34.30 2.43
2307 6482 5.349817 CGACAAAATGAGTGAAGTGCTCTAT 59.650 40.000 0.00 0.00 34.30 1.98
2308 6483 6.492007 ACAAAATGAGTGAAGTGCTCTATG 57.508 37.500 0.00 0.00 34.30 2.23
2309 6484 6.233434 ACAAAATGAGTGAAGTGCTCTATGA 58.767 36.000 0.00 0.00 34.30 2.15
2310 6485 6.883217 ACAAAATGAGTGAAGTGCTCTATGAT 59.117 34.615 0.00 0.00 34.30 2.45
2311 6486 6.922247 AAATGAGTGAAGTGCTCTATGATG 57.078 37.500 0.00 0.00 34.30 3.07
2312 6487 5.866159 ATGAGTGAAGTGCTCTATGATGA 57.134 39.130 0.00 0.00 34.30 2.92
2313 6488 5.866159 TGAGTGAAGTGCTCTATGATGAT 57.134 39.130 0.00 0.00 34.30 2.45
2314 6489 6.966534 TGAGTGAAGTGCTCTATGATGATA 57.033 37.500 0.00 0.00 34.30 2.15
2315 6490 7.352079 TGAGTGAAGTGCTCTATGATGATAA 57.648 36.000 0.00 0.00 34.30 1.75
2316 6491 7.205992 TGAGTGAAGTGCTCTATGATGATAAC 58.794 38.462 0.00 0.00 34.30 1.89
2317 6492 7.117285 AGTGAAGTGCTCTATGATGATAACA 57.883 36.000 0.00 0.00 0.00 2.41
2318 6493 7.559486 AGTGAAGTGCTCTATGATGATAACAA 58.441 34.615 0.00 0.00 0.00 2.83
2319 6494 8.209584 AGTGAAGTGCTCTATGATGATAACAAT 58.790 33.333 0.00 0.00 0.00 2.71
2320 6495 9.481340 GTGAAGTGCTCTATGATGATAACAATA 57.519 33.333 0.00 0.00 0.00 1.90
2321 6496 9.481340 TGAAGTGCTCTATGATGATAACAATAC 57.519 33.333 0.00 0.00 0.00 1.89
2322 6497 8.839310 AAGTGCTCTATGATGATAACAATACC 57.161 34.615 0.00 0.00 0.00 2.73
2323 6498 8.200024 AGTGCTCTATGATGATAACAATACCT 57.800 34.615 0.00 0.00 0.00 3.08
2324 6499 8.654997 AGTGCTCTATGATGATAACAATACCTT 58.345 33.333 0.00 0.00 0.00 3.50
2325 6500 8.715998 GTGCTCTATGATGATAACAATACCTTG 58.284 37.037 0.00 0.00 38.39 3.61
2326 6501 8.650490 TGCTCTATGATGATAACAATACCTTGA 58.350 33.333 0.00 0.00 36.20 3.02
2327 6502 9.494271 GCTCTATGATGATAACAATACCTTGAA 57.506 33.333 0.00 0.00 36.20 2.69
2333 6508 9.958180 TGATGATAACAATACCTTGAAGAAGAA 57.042 29.630 0.00 0.00 36.20 2.52
2341 6516 9.965902 ACAATACCTTGAAGAAGAATACAATCT 57.034 29.630 0.00 0.00 36.20 2.40
2343 6518 9.965902 AATACCTTGAAGAAGAATACAATCTGT 57.034 29.630 0.00 0.00 0.00 3.41
2344 6519 7.678947 ACCTTGAAGAAGAATACAATCTGTG 57.321 36.000 0.00 0.00 0.00 3.66
2345 6520 6.656693 ACCTTGAAGAAGAATACAATCTGTGG 59.343 38.462 0.00 0.00 0.00 4.17
2346 6521 6.656693 CCTTGAAGAAGAATACAATCTGTGGT 59.343 38.462 0.00 0.00 0.00 4.16
2347 6522 7.361542 CCTTGAAGAAGAATACAATCTGTGGTG 60.362 40.741 0.00 0.00 0.00 4.17
2348 6523 5.939883 TGAAGAAGAATACAATCTGTGGTGG 59.060 40.000 0.00 0.00 0.00 4.61
2349 6524 4.848357 AGAAGAATACAATCTGTGGTGGG 58.152 43.478 0.00 0.00 0.00 4.61
2350 6525 4.536090 AGAAGAATACAATCTGTGGTGGGA 59.464 41.667 0.00 0.00 0.00 4.37
2351 6526 4.927267 AGAATACAATCTGTGGTGGGAA 57.073 40.909 0.00 0.00 0.00 3.97
2352 6527 4.848357 AGAATACAATCTGTGGTGGGAAG 58.152 43.478 0.00 0.00 0.00 3.46
2353 6528 3.652057 ATACAATCTGTGGTGGGAAGG 57.348 47.619 0.00 0.00 0.00 3.46
2354 6529 1.149101 ACAATCTGTGGTGGGAAGGT 58.851 50.000 0.00 0.00 0.00 3.50
2355 6530 1.499007 ACAATCTGTGGTGGGAAGGTT 59.501 47.619 0.00 0.00 0.00 3.50
2356 6531 1.888512 CAATCTGTGGTGGGAAGGTTG 59.111 52.381 0.00 0.00 0.00 3.77
2357 6532 0.251341 ATCTGTGGTGGGAAGGTTGC 60.251 55.000 0.00 0.00 0.00 4.17
2358 6533 1.151450 CTGTGGTGGGAAGGTTGCT 59.849 57.895 0.00 0.00 0.00 3.91
2359 6534 0.400213 CTGTGGTGGGAAGGTTGCTA 59.600 55.000 0.00 0.00 0.00 3.49
2360 6535 1.004745 CTGTGGTGGGAAGGTTGCTAT 59.995 52.381 0.00 0.00 0.00 2.97
2361 6536 2.238646 CTGTGGTGGGAAGGTTGCTATA 59.761 50.000 0.00 0.00 0.00 1.31
2362 6537 2.238646 TGTGGTGGGAAGGTTGCTATAG 59.761 50.000 0.00 0.00 0.00 1.31
2363 6538 2.504175 GTGGTGGGAAGGTTGCTATAGA 59.496 50.000 3.21 0.00 0.00 1.98
2364 6539 2.771943 TGGTGGGAAGGTTGCTATAGAG 59.228 50.000 3.21 0.00 0.00 2.43
2365 6540 2.772515 GGTGGGAAGGTTGCTATAGAGT 59.227 50.000 3.21 0.00 0.00 3.24
2366 6541 3.432326 GGTGGGAAGGTTGCTATAGAGTG 60.432 52.174 3.21 0.00 0.00 3.51
2367 6542 2.170607 TGGGAAGGTTGCTATAGAGTGC 59.829 50.000 3.21 0.00 0.00 4.40
2368 6543 2.485657 GGGAAGGTTGCTATAGAGTGCC 60.486 54.545 3.21 0.00 0.00 5.01
2369 6544 2.170607 GGAAGGTTGCTATAGAGTGCCA 59.829 50.000 3.21 0.00 0.00 4.92
2370 6545 2.990066 AGGTTGCTATAGAGTGCCAC 57.010 50.000 3.21 0.00 0.00 5.01
2371 6546 2.472029 AGGTTGCTATAGAGTGCCACT 58.528 47.619 3.21 0.00 0.00 4.00
2372 6547 2.840651 AGGTTGCTATAGAGTGCCACTT 59.159 45.455 3.21 0.00 0.00 3.16
2373 6548 2.939103 GGTTGCTATAGAGTGCCACTTG 59.061 50.000 3.21 0.00 0.00 3.16
2374 6549 2.939103 GTTGCTATAGAGTGCCACTTGG 59.061 50.000 3.21 0.00 38.53 3.61
2393 6568 9.965824 CCACTTGGCCTTATTACATAATAAAAG 57.034 33.333 3.32 8.07 37.60 2.27
2408 6583 9.606631 ACATAATAAAAGTTCAGAAGCTAGGAG 57.393 33.333 0.00 0.00 0.00 3.69
2409 6584 9.606631 CATAATAAAAGTTCAGAAGCTAGGAGT 57.393 33.333 0.00 0.00 0.00 3.85
2412 6587 9.438228 AATAAAAGTTCAGAAGCTAGGAGTAAC 57.562 33.333 0.00 0.00 0.00 2.50
2413 6588 4.705337 AGTTCAGAAGCTAGGAGTAACG 57.295 45.455 0.00 0.00 0.00 3.18
2414 6589 3.119424 AGTTCAGAAGCTAGGAGTAACGC 60.119 47.826 0.00 0.00 0.00 4.84
2415 6590 1.749634 TCAGAAGCTAGGAGTAACGCC 59.250 52.381 0.00 0.00 0.00 5.68
2416 6591 1.476891 CAGAAGCTAGGAGTAACGCCA 59.523 52.381 0.00 0.00 0.00 5.69
2417 6592 2.101582 CAGAAGCTAGGAGTAACGCCAT 59.898 50.000 0.00 0.00 0.00 4.40
2418 6593 2.766828 AGAAGCTAGGAGTAACGCCATT 59.233 45.455 0.00 0.00 0.00 3.16
2419 6594 3.197983 AGAAGCTAGGAGTAACGCCATTT 59.802 43.478 0.00 0.00 0.00 2.32
2420 6595 3.180891 AGCTAGGAGTAACGCCATTTC 57.819 47.619 0.00 0.00 0.00 2.17
2421 6596 2.500098 AGCTAGGAGTAACGCCATTTCA 59.500 45.455 0.00 0.00 0.00 2.69
2422 6597 3.134804 AGCTAGGAGTAACGCCATTTCAT 59.865 43.478 0.00 0.00 0.00 2.57
2423 6598 3.495001 GCTAGGAGTAACGCCATTTCATC 59.505 47.826 0.00 0.00 0.00 2.92
2424 6599 3.914426 AGGAGTAACGCCATTTCATCT 57.086 42.857 0.00 0.00 0.00 2.90
2425 6600 3.798202 AGGAGTAACGCCATTTCATCTC 58.202 45.455 0.00 0.00 0.00 2.75
2426 6601 2.872858 GGAGTAACGCCATTTCATCTCC 59.127 50.000 0.00 0.00 34.48 3.71
2427 6602 3.531538 GAGTAACGCCATTTCATCTCCA 58.468 45.455 0.00 0.00 0.00 3.86
2428 6603 3.938963 GAGTAACGCCATTTCATCTCCAA 59.061 43.478 0.00 0.00 0.00 3.53
2429 6604 4.526970 AGTAACGCCATTTCATCTCCAAT 58.473 39.130 0.00 0.00 0.00 3.16
2430 6605 3.788333 AACGCCATTTCATCTCCAATG 57.212 42.857 0.00 0.00 0.00 2.82
2431 6606 1.406539 ACGCCATTTCATCTCCAATGC 59.593 47.619 0.00 0.00 0.00 3.56
2432 6607 1.406180 CGCCATTTCATCTCCAATGCA 59.594 47.619 0.00 0.00 0.00 3.96
2433 6608 2.543031 CGCCATTTCATCTCCAATGCAG 60.543 50.000 0.00 0.00 0.00 4.41
2434 6609 2.691526 GCCATTTCATCTCCAATGCAGA 59.308 45.455 0.00 0.00 0.00 4.26
2435 6610 3.131577 GCCATTTCATCTCCAATGCAGAA 59.868 43.478 0.00 0.00 0.00 3.02
2436 6611 4.736759 GCCATTTCATCTCCAATGCAGAAG 60.737 45.833 0.00 0.00 0.00 2.85
2437 6612 4.202121 CCATTTCATCTCCAATGCAGAAGG 60.202 45.833 0.00 0.00 0.00 3.46
2438 6613 3.726557 TTCATCTCCAATGCAGAAGGT 57.273 42.857 0.00 0.00 0.00 3.50
2439 6614 4.842531 TTCATCTCCAATGCAGAAGGTA 57.157 40.909 0.00 0.00 0.00 3.08
2440 6615 5.378230 TTCATCTCCAATGCAGAAGGTAT 57.622 39.130 0.00 0.00 0.00 2.73
2441 6616 5.378230 TCATCTCCAATGCAGAAGGTATT 57.622 39.130 0.00 0.00 31.39 1.89
2442 6617 5.128205 TCATCTCCAATGCAGAAGGTATTG 58.872 41.667 0.00 0.00 45.77 1.90
2443 6618 3.282021 TCTCCAATGCAGAAGGTATTGC 58.718 45.455 0.00 0.00 45.10 3.56
2444 6619 3.054139 TCTCCAATGCAGAAGGTATTGCT 60.054 43.478 0.00 0.00 45.10 3.91
2445 6620 3.018856 TCCAATGCAGAAGGTATTGCTG 58.981 45.455 0.00 0.00 45.10 4.41
2446 6621 2.756760 CCAATGCAGAAGGTATTGCTGT 59.243 45.455 0.00 0.00 45.10 4.40
2447 6622 3.194116 CCAATGCAGAAGGTATTGCTGTT 59.806 43.478 0.00 0.00 45.10 3.16
2448 6623 4.398988 CCAATGCAGAAGGTATTGCTGTTA 59.601 41.667 0.00 0.00 45.10 2.41
2449 6624 5.068198 CCAATGCAGAAGGTATTGCTGTTAT 59.932 40.000 0.00 0.00 45.10 1.89
2450 6625 6.406177 CCAATGCAGAAGGTATTGCTGTTATT 60.406 38.462 0.00 0.00 45.10 1.40
2451 6626 7.201812 CCAATGCAGAAGGTATTGCTGTTATTA 60.202 37.037 0.00 0.00 45.10 0.98
2452 6627 8.355169 CAATGCAGAAGGTATTGCTGTTATTAT 58.645 33.333 0.00 0.00 41.60 1.28
2453 6628 7.880160 TGCAGAAGGTATTGCTGTTATTATT 57.120 32.000 0.00 0.00 40.87 1.40
2454 6629 8.292444 TGCAGAAGGTATTGCTGTTATTATTT 57.708 30.769 0.00 0.00 40.87 1.40
2455 6630 8.405531 TGCAGAAGGTATTGCTGTTATTATTTC 58.594 33.333 0.00 0.00 40.87 2.17
2456 6631 8.624776 GCAGAAGGTATTGCTGTTATTATTTCT 58.375 33.333 0.00 0.00 37.35 2.52
2460 6635 9.627123 AAGGTATTGCTGTTATTATTTCTAGCA 57.373 29.630 0.00 0.00 39.17 3.49
2461 6636 9.057089 AGGTATTGCTGTTATTATTTCTAGCAC 57.943 33.333 0.00 0.00 40.45 4.40
2462 6637 8.836413 GGTATTGCTGTTATTATTTCTAGCACA 58.164 33.333 0.00 0.00 40.45 4.57
2465 6640 9.740239 ATTGCTGTTATTATTTCTAGCACATTG 57.260 29.630 0.00 0.00 40.45 2.82
2466 6641 7.706159 TGCTGTTATTATTTCTAGCACATTGG 58.294 34.615 0.00 0.00 36.37 3.16
2467 6642 6.638468 GCTGTTATTATTTCTAGCACATTGGC 59.362 38.462 0.00 0.00 0.00 4.52
2468 6643 7.038154 TGTTATTATTTCTAGCACATTGGCC 57.962 36.000 0.00 0.00 0.00 5.36
2469 6644 6.040391 TGTTATTATTTCTAGCACATTGGCCC 59.960 38.462 0.00 0.00 0.00 5.80
2470 6645 2.530460 ATTTCTAGCACATTGGCCCA 57.470 45.000 0.00 0.00 0.00 5.36
2471 6646 2.300956 TTTCTAGCACATTGGCCCAA 57.699 45.000 0.00 0.00 0.00 4.12
2472 6647 1.838112 TTCTAGCACATTGGCCCAAG 58.162 50.000 1.16 0.00 0.00 3.61
2473 6648 0.680921 TCTAGCACATTGGCCCAAGC 60.681 55.000 1.16 0.00 38.76 4.01
2474 6649 0.966875 CTAGCACATTGGCCCAAGCA 60.967 55.000 1.16 0.00 42.56 3.91
2475 6650 0.966875 TAGCACATTGGCCCAAGCAG 60.967 55.000 1.16 0.00 42.56 4.24
2476 6651 2.263540 CACATTGGCCCAAGCAGC 59.736 61.111 1.16 0.00 42.56 5.25
2477 6652 2.118951 ACATTGGCCCAAGCAGCT 59.881 55.556 1.16 0.00 42.56 4.24
2478 6653 2.280552 ACATTGGCCCAAGCAGCTG 61.281 57.895 10.11 10.11 42.56 4.24
2479 6654 3.387947 ATTGGCCCAAGCAGCTGC 61.388 61.111 31.53 31.53 42.56 5.25
2480 6655 4.918278 TTGGCCCAAGCAGCTGCA 62.918 61.111 38.24 15.14 45.16 4.41
2484 6659 4.034258 CCCAAGCAGCTGCACGTG 62.034 66.667 38.24 29.64 45.16 4.49
2485 6660 4.695231 CCAAGCAGCTGCACGTGC 62.695 66.667 38.24 33.11 45.16 5.34
2497 6672 2.480224 GCACGTGCAGCATCATTATT 57.520 45.000 34.52 0.00 41.59 1.40
2498 6673 2.378806 GCACGTGCAGCATCATTATTC 58.621 47.619 34.52 0.00 41.59 1.75
2499 6674 2.032550 GCACGTGCAGCATCATTATTCT 59.967 45.455 34.52 0.00 41.59 2.40
2500 6675 3.847467 GCACGTGCAGCATCATTATTCTC 60.847 47.826 34.52 0.00 41.59 2.87
2501 6676 3.558829 CACGTGCAGCATCATTATTCTCT 59.441 43.478 0.82 0.00 0.00 3.10
2502 6677 4.034858 CACGTGCAGCATCATTATTCTCTT 59.965 41.667 0.82 0.00 0.00 2.85
2503 6678 4.034858 ACGTGCAGCATCATTATTCTCTTG 59.965 41.667 0.00 0.00 0.00 3.02
2504 6679 4.554134 CGTGCAGCATCATTATTCTCTTGG 60.554 45.833 0.00 0.00 0.00 3.61
2505 6680 4.577693 GTGCAGCATCATTATTCTCTTGGA 59.422 41.667 0.00 0.00 0.00 3.53
2506 6681 5.241064 GTGCAGCATCATTATTCTCTTGGAT 59.759 40.000 0.00 0.00 0.00 3.41
2507 6682 6.429078 GTGCAGCATCATTATTCTCTTGGATA 59.571 38.462 0.00 0.00 0.00 2.59
2508 6683 7.120873 GTGCAGCATCATTATTCTCTTGGATAT 59.879 37.037 0.00 0.00 0.00 1.63
2509 6684 8.323567 TGCAGCATCATTATTCTCTTGGATATA 58.676 33.333 0.00 0.00 0.00 0.86
2510 6685 9.170734 GCAGCATCATTATTCTCTTGGATATAA 57.829 33.333 0.00 0.00 0.00 0.98
2562 6737 9.515226 TTACCAAAAAGTGATTATAAGTGAGCT 57.485 29.630 0.00 0.00 0.00 4.09
2564 6739 9.167311 ACCAAAAAGTGATTATAAGTGAGCTAG 57.833 33.333 0.00 0.00 0.00 3.42
2565 6740 9.383519 CCAAAAAGTGATTATAAGTGAGCTAGA 57.616 33.333 0.00 0.00 0.00 2.43
2569 6744 9.944376 AAAGTGATTATAAGTGAGCTAGAAACA 57.056 29.630 0.00 0.00 0.00 2.83
2571 6746 9.539825 AGTGATTATAAGTGAGCTAGAAACATG 57.460 33.333 0.00 0.00 0.00 3.21
2572 6747 9.319143 GTGATTATAAGTGAGCTAGAAACATGT 57.681 33.333 0.00 0.00 0.00 3.21
2573 6748 9.890629 TGATTATAAGTGAGCTAGAAACATGTT 57.109 29.630 4.92 4.92 0.00 2.71
2629 6804 7.887996 TTTTTGGTTGCTTTGATTATAGCTG 57.112 32.000 0.00 0.00 38.22 4.24
2630 6805 5.581126 TTGGTTGCTTTGATTATAGCTGG 57.419 39.130 0.00 0.00 38.22 4.85
2631 6806 4.599041 TGGTTGCTTTGATTATAGCTGGT 58.401 39.130 0.00 0.00 38.22 4.00
2632 6807 4.398988 TGGTTGCTTTGATTATAGCTGGTG 59.601 41.667 0.00 0.00 38.22 4.17
2633 6808 4.202050 GGTTGCTTTGATTATAGCTGGTGG 60.202 45.833 0.00 0.00 38.22 4.61
2634 6809 4.502105 TGCTTTGATTATAGCTGGTGGA 57.498 40.909 0.00 0.00 38.22 4.02
2635 6810 4.854173 TGCTTTGATTATAGCTGGTGGAA 58.146 39.130 0.00 0.00 38.22 3.53
2636 6811 5.260424 TGCTTTGATTATAGCTGGTGGAAA 58.740 37.500 0.00 0.00 38.22 3.13
2637 6812 5.714333 TGCTTTGATTATAGCTGGTGGAAAA 59.286 36.000 0.00 0.00 38.22 2.29
2638 6813 6.036470 GCTTTGATTATAGCTGGTGGAAAAC 58.964 40.000 0.00 0.00 34.57 2.43
2639 6814 5.811399 TTGATTATAGCTGGTGGAAAACG 57.189 39.130 0.00 0.00 0.00 3.60
2640 6815 4.839121 TGATTATAGCTGGTGGAAAACGT 58.161 39.130 0.00 0.00 0.00 3.99
2641 6816 5.979993 TGATTATAGCTGGTGGAAAACGTA 58.020 37.500 0.00 0.00 0.00 3.57
2642 6817 6.588204 TGATTATAGCTGGTGGAAAACGTAT 58.412 36.000 0.00 0.00 0.00 3.06
2643 6818 6.481976 TGATTATAGCTGGTGGAAAACGTATG 59.518 38.462 0.00 0.00 0.00 2.39
2644 6819 2.561478 AGCTGGTGGAAAACGTATGT 57.439 45.000 0.00 0.00 0.00 2.29
2645 6820 3.688694 AGCTGGTGGAAAACGTATGTA 57.311 42.857 0.00 0.00 0.00 2.29
2646 6821 4.010667 AGCTGGTGGAAAACGTATGTAA 57.989 40.909 0.00 0.00 0.00 2.41
2647 6822 4.585879 AGCTGGTGGAAAACGTATGTAAT 58.414 39.130 0.00 0.00 0.00 1.89
2648 6823 5.007682 AGCTGGTGGAAAACGTATGTAATT 58.992 37.500 0.00 0.00 0.00 1.40
2649 6824 5.123344 AGCTGGTGGAAAACGTATGTAATTC 59.877 40.000 0.00 5.40 0.00 2.17
2650 6825 5.123344 GCTGGTGGAAAACGTATGTAATTCT 59.877 40.000 11.30 0.00 0.00 2.40
2651 6826 6.314400 GCTGGTGGAAAACGTATGTAATTCTA 59.686 38.462 11.30 5.07 0.00 2.10
2652 6827 7.148373 GCTGGTGGAAAACGTATGTAATTCTAA 60.148 37.037 11.30 1.77 0.00 2.10
2653 6828 8.795842 TGGTGGAAAACGTATGTAATTCTAAT 57.204 30.769 11.30 0.00 0.00 1.73
2654 6829 9.887629 TGGTGGAAAACGTATGTAATTCTAATA 57.112 29.630 11.30 0.07 0.00 0.98
2663 6838 9.760077 ACGTATGTAATTCTAATAGTCTTTGGG 57.240 33.333 0.00 0.00 0.00 4.12
2664 6839 9.976511 CGTATGTAATTCTAATAGTCTTTGGGA 57.023 33.333 0.00 0.00 0.00 4.37
2679 6854 8.056407 AGTCTTTGGGAAACTATATGAAAAGC 57.944 34.615 0.00 0.00 0.00 3.51
2680 6855 6.967199 GTCTTTGGGAAACTATATGAAAAGCG 59.033 38.462 0.00 0.00 0.00 4.68
2681 6856 6.657541 TCTTTGGGAAACTATATGAAAAGCGT 59.342 34.615 0.00 0.00 0.00 5.07
2682 6857 7.825270 TCTTTGGGAAACTATATGAAAAGCGTA 59.175 33.333 0.00 0.00 0.00 4.42
2683 6858 7.925043 TTGGGAAACTATATGAAAAGCGTAA 57.075 32.000 0.00 0.00 0.00 3.18
2684 6859 7.311364 TGGGAAACTATATGAAAAGCGTAAC 57.689 36.000 0.00 0.00 0.00 2.50
2685 6860 6.879993 TGGGAAACTATATGAAAAGCGTAACA 59.120 34.615 0.00 0.00 0.00 2.41
2686 6861 7.554835 TGGGAAACTATATGAAAAGCGTAACAT 59.445 33.333 0.00 0.00 0.00 2.71
2687 6862 8.403236 GGGAAACTATATGAAAAGCGTAACATT 58.597 33.333 0.00 0.00 0.00 2.71
2688 6863 9.783256 GGAAACTATATGAAAAGCGTAACATTT 57.217 29.630 0.00 0.00 0.00 2.32
2703 6878 9.615295 AGCGTAACATTTAACATAATTTTTCGT 57.385 25.926 0.00 0.00 0.00 3.85
2704 6879 9.651531 GCGTAACATTTAACATAATTTTTCGTG 57.348 29.630 0.00 0.00 0.00 4.35
2712 6887 8.789881 TTAACATAATTTTTCGTGACAACTGG 57.210 30.769 0.00 0.00 0.00 4.00
2713 6888 6.627395 ACATAATTTTTCGTGACAACTGGA 57.373 33.333 0.00 0.00 0.00 3.86
2714 6889 7.033530 ACATAATTTTTCGTGACAACTGGAA 57.966 32.000 0.00 0.00 0.00 3.53
2715 6890 7.657336 ACATAATTTTTCGTGACAACTGGAAT 58.343 30.769 0.00 0.00 0.00 3.01
2716 6891 8.141268 ACATAATTTTTCGTGACAACTGGAATT 58.859 29.630 0.00 0.00 0.00 2.17
2717 6892 8.638565 CATAATTTTTCGTGACAACTGGAATTC 58.361 33.333 0.00 0.00 0.00 2.17
2718 6893 5.828299 TTTTTCGTGACAACTGGAATTCT 57.172 34.783 5.23 0.00 0.00 2.40
2719 6894 4.811555 TTTCGTGACAACTGGAATTCTG 57.188 40.909 5.23 0.00 0.00 3.02
2720 6895 3.469008 TCGTGACAACTGGAATTCTGT 57.531 42.857 5.23 1.35 0.00 3.41
2721 6896 3.804036 TCGTGACAACTGGAATTCTGTT 58.196 40.909 5.23 8.27 37.91 3.16
2722 6897 4.951254 TCGTGACAACTGGAATTCTGTTA 58.049 39.130 5.23 0.00 36.06 2.41
2723 6898 5.361427 TCGTGACAACTGGAATTCTGTTAA 58.639 37.500 5.23 0.00 36.06 2.01
2724 6899 5.235616 TCGTGACAACTGGAATTCTGTTAAC 59.764 40.000 5.23 0.00 36.06 2.01
2725 6900 5.560183 CGTGACAACTGGAATTCTGTTAACC 60.560 44.000 5.23 4.98 36.06 2.85
2726 6901 5.298276 GTGACAACTGGAATTCTGTTAACCA 59.702 40.000 5.23 7.01 36.06 3.67
2727 6902 5.888724 TGACAACTGGAATTCTGTTAACCAA 59.111 36.000 5.23 0.00 36.06 3.67
2728 6903 6.039270 TGACAACTGGAATTCTGTTAACCAAG 59.961 38.462 5.23 0.00 36.06 3.61
2729 6904 5.891551 ACAACTGGAATTCTGTTAACCAAGT 59.108 36.000 5.23 0.00 36.06 3.16
2730 6905 7.057894 ACAACTGGAATTCTGTTAACCAAGTA 58.942 34.615 5.23 0.00 36.06 2.24
2731 6906 7.012989 ACAACTGGAATTCTGTTAACCAAGTAC 59.987 37.037 5.23 0.00 36.06 2.73
2732 6907 6.597562 ACTGGAATTCTGTTAACCAAGTACA 58.402 36.000 5.23 1.71 0.00 2.90
2733 6908 7.057894 ACTGGAATTCTGTTAACCAAGTACAA 58.942 34.615 5.23 0.00 0.00 2.41
2734 6909 7.724061 ACTGGAATTCTGTTAACCAAGTACAAT 59.276 33.333 5.23 0.00 0.00 2.71
2735 6910 8.472007 TGGAATTCTGTTAACCAAGTACAATT 57.528 30.769 5.23 0.00 0.00 2.32
2736 6911 8.919145 TGGAATTCTGTTAACCAAGTACAATTT 58.081 29.630 5.23 0.00 0.00 1.82
2793 6968 6.690957 TGAAACACTAGCATTTTTGTTCTTCG 59.309 34.615 0.00 0.00 30.92 3.79
2794 6969 5.751243 ACACTAGCATTTTTGTTCTTCGT 57.249 34.783 0.00 0.00 0.00 3.85
2796 6971 6.560711 ACACTAGCATTTTTGTTCTTCGTTT 58.439 32.000 0.00 0.00 0.00 3.60
2797 6972 6.691388 ACACTAGCATTTTTGTTCTTCGTTTC 59.309 34.615 0.00 0.00 0.00 2.78
2798 6973 6.142320 CACTAGCATTTTTGTTCTTCGTTTCC 59.858 38.462 0.00 0.00 0.00 3.13
2838 7018 8.814931 TGATTTTTATGGGATCAATCAAACAGT 58.185 29.630 0.00 0.00 32.25 3.55
2842 7022 5.909621 ATGGGATCAATCAAACAGTCTTG 57.090 39.130 0.00 0.00 0.00 3.02
2875 7055 8.176814 TCGTCTTGGTATTTCGTATTTACTTG 57.823 34.615 0.00 0.00 0.00 3.16
2877 7057 8.437742 CGTCTTGGTATTTCGTATTTACTTGTT 58.562 33.333 0.00 0.00 0.00 2.83
2917 7097 6.978343 TTTTTGTATAATGGTCTGTCCTCG 57.022 37.500 0.00 0.00 37.07 4.63
2918 7098 5.670792 TTTGTATAATGGTCTGTCCTCGT 57.329 39.130 0.00 0.00 37.07 4.18
2937 7117 1.004745 GTCCTGCTTCCTTCAATCCCA 59.995 52.381 0.00 0.00 0.00 4.37
2942 7122 2.158325 TGCTTCCTTCAATCCCAAGGTT 60.158 45.455 0.00 0.00 41.28 3.50
2944 7124 4.264352 TGCTTCCTTCAATCCCAAGGTTAT 60.264 41.667 0.00 0.00 41.28 1.89
2990 7343 3.305539 CCTCCACATTGGTGTCATTTGTG 60.306 47.826 0.00 0.00 43.71 3.33
2995 7348 3.569701 ACATTGGTGTCATTTGTGTCTCC 59.430 43.478 0.00 0.00 31.41 3.71
3001 7354 4.819630 GGTGTCATTTGTGTCTCCTTACAA 59.180 41.667 0.00 0.00 35.20 2.41
3009 7362 4.710324 TGTGTCTCCTTACAATTCCGTTT 58.290 39.130 0.00 0.00 0.00 3.60
3111 7464 9.593134 TCATAACAAAAAGCACACTTGTTAAAT 57.407 25.926 13.74 2.35 44.39 1.40
3144 7497 7.032377 AGAAGAGTTTGCTCAACTTTAAAGG 57.968 36.000 19.14 2.84 46.53 3.11
3154 7507 6.072508 TGCTCAACTTTAAAGGCTACAATCTG 60.073 38.462 19.14 3.13 0.00 2.90
3156 7509 7.435068 TCAACTTTAAAGGCTACAATCTGAC 57.565 36.000 19.14 0.00 0.00 3.51
3160 7513 7.328737 ACTTTAAAGGCTACAATCTGACGTAT 58.671 34.615 19.14 0.00 0.00 3.06
3161 7514 7.491696 ACTTTAAAGGCTACAATCTGACGTATC 59.508 37.037 19.14 0.00 0.00 2.24
3164 7517 4.207955 AGGCTACAATCTGACGTATCTCA 58.792 43.478 0.00 0.00 0.00 3.27
3165 7518 4.830046 AGGCTACAATCTGACGTATCTCAT 59.170 41.667 0.00 0.00 0.00 2.90
3166 7519 6.004574 AGGCTACAATCTGACGTATCTCATA 58.995 40.000 0.00 0.00 0.00 2.15
3169 7522 7.364200 GCTACAATCTGACGTATCTCATACTT 58.636 38.462 0.00 0.00 33.59 2.24
3171 7524 6.507900 ACAATCTGACGTATCTCATACTTGG 58.492 40.000 0.00 0.00 33.59 3.61
3273 7633 1.934589 TGGGATTACGATTGCTCACG 58.065 50.000 0.00 0.00 0.00 4.35
3279 7639 5.867716 GGGATTACGATTGCTCACGTATATT 59.132 40.000 0.00 0.00 42.86 1.28
3377 7738 3.640967 AGTAAGAACAATTTGGCCAAGCA 59.359 39.130 19.48 5.09 0.00 3.91
3489 7850 2.178764 TCAGGAGGGATCTAGTGCTCAT 59.821 50.000 0.00 0.00 0.00 2.90
3501 7862 6.299805 TCTAGTGCTCATGTTGAGGTAAAT 57.700 37.500 6.64 0.00 44.43 1.40
3522 7883 3.456380 ACAAAGCAACCATCCCATACT 57.544 42.857 0.00 0.00 0.00 2.12
3526 7887 4.796110 AAGCAACCATCCCATACTACAT 57.204 40.909 0.00 0.00 0.00 2.29
3527 7888 5.904984 AAGCAACCATCCCATACTACATA 57.095 39.130 0.00 0.00 0.00 2.29
3528 7889 5.489792 AGCAACCATCCCATACTACATAG 57.510 43.478 0.00 0.00 0.00 2.23
3569 7937 5.649395 TCCATGCCTTTCTCAGAAGTTTATG 59.351 40.000 0.00 0.00 0.00 1.90
3641 8009 0.760567 TGTGTCAGCACCTCTCCTGT 60.761 55.000 0.00 0.00 44.65 4.00
3776 8144 6.605471 TTGAGAAGGACAGTATAAGAAGCA 57.395 37.500 0.00 0.00 0.00 3.91
3827 8195 9.261180 GAAGATCAATCACGGATCATAGTTTAA 57.739 33.333 0.00 0.00 42.84 1.52
3837 8205 6.324254 ACGGATCATAGTTTAACTAGGCTCTT 59.676 38.462 16.44 5.50 33.66 2.85
3993 9095 3.319122 ACAAAATGCCACTTCAAGGACTC 59.681 43.478 0.00 0.00 0.00 3.36
4025 9129 4.913335 TTTACAACGGTGGTATTTGCAA 57.087 36.364 4.97 0.00 0.00 4.08
4062 9169 8.647143 TTTCTGTTTCTTTCATGGATTTGTTC 57.353 30.769 0.00 0.00 0.00 3.18
4135 9246 9.739276 TTGAATTTCAGAGACATAAATGTACCT 57.261 29.630 0.00 0.00 41.95 3.08
4184 9299 6.043706 CAGGGGAGAAGAAAGGACATATGTAT 59.956 42.308 8.71 0.00 0.00 2.29
4189 9304 8.527810 GGAGAAGAAAGGACATATGTATAGAGG 58.472 40.741 8.71 0.00 0.00 3.69
4342 9465 7.691430 TGTGTGTGTAACTTTGCATAAATTG 57.309 32.000 0.00 0.00 38.04 2.32
4401 9524 6.365789 CGATTCTTCTTCTAGATGCAGATTCC 59.634 42.308 16.85 7.62 0.00 3.01
4467 9598 7.353497 CAGATCAATGTTCAGAGTTGATATGC 58.647 38.462 12.82 2.91 41.60 3.14
4515 9685 1.202245 GCAAAGTTTCTTGTGTGCGGA 60.202 47.619 0.00 0.00 0.00 5.54
4569 9747 2.124901 CGGAACCGCCCAGCATTA 60.125 61.111 0.00 0.00 0.00 1.90
4624 9831 4.503741 TGTTTGCAAGCCTGATTAGTTC 57.496 40.909 11.02 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 100 1.306296 GAATGCTGGCCTACCCCAA 59.694 57.895 3.32 0.00 33.73 4.12
96 101 2.689691 GGAATGCTGGCCTACCCCA 61.690 63.158 3.32 0.00 33.59 4.96
170 176 4.436998 GGACGTGGACGGAGCAGG 62.437 72.222 0.00 0.00 44.95 4.85
296 302 2.123726 AGCCATCCGCAAATCCCC 60.124 61.111 0.00 0.00 41.38 4.81
321 440 1.299620 GTGATGATGGCCGCATTGC 60.300 57.895 11.70 0.00 0.00 3.56
340 459 4.357947 TCGTCGTGCAGTGGGCTC 62.358 66.667 0.00 0.00 45.15 4.70
433 552 2.434185 GAGATGACGCGGCACCAA 60.434 61.111 21.63 0.00 0.00 3.67
478 597 2.509336 GACGATGGGTGGCTGACG 60.509 66.667 0.00 0.00 0.00 4.35
479 598 2.509336 CGACGATGGGTGGCTGAC 60.509 66.667 0.00 0.00 0.00 3.51
534 653 2.933287 TGTGGAAGCGGGGGACAT 60.933 61.111 0.00 0.00 0.00 3.06
535 654 3.948719 GTGTGGAAGCGGGGGACA 61.949 66.667 0.00 0.00 0.00 4.02
536 655 4.717313 GGTGTGGAAGCGGGGGAC 62.717 72.222 0.00 0.00 0.00 4.46
880 2734 2.775911 TGAATCTGGAGTTGCTCTGG 57.224 50.000 0.00 0.00 0.00 3.86
911 2765 1.722011 CGTGCCGGAGTTTACTCAAT 58.278 50.000 5.05 0.00 44.60 2.57
1005 2864 2.896801 GAATATGTGGCCGGCTGCG 61.897 63.158 28.56 0.00 42.61 5.18
1044 2903 2.097038 CGTGTCTAGCACCAGCAGC 61.097 63.158 10.44 0.00 44.97 5.25
1045 2904 0.457509 CTCGTGTCTAGCACCAGCAG 60.458 60.000 10.44 0.00 44.97 4.24
1077 2936 2.137528 TGGGACACCGTGCTCTGAA 61.138 57.895 0.00 0.00 40.75 3.02
1198 3061 2.672098 GAGAGGCTCCTCCACTATGAA 58.328 52.381 11.71 0.00 43.70 2.57
1212 3075 3.378399 GACTTCCAGGCGGAGAGGC 62.378 68.421 0.00 0.00 44.10 4.70
1254 3127 6.035542 CGCACTTCCAACAAAATTTAACTTGT 59.964 34.615 0.00 0.00 37.36 3.16
1259 3132 6.137794 TCTCGCACTTCCAACAAAATTTAA 57.862 33.333 0.00 0.00 0.00 1.52
1317 3194 0.429736 CTTTGTACACACGAGCGTCG 59.570 55.000 0.00 5.97 46.93 5.12
1406 3287 1.610522 ACTTTGCCAACAGAGTCATGC 59.389 47.619 0.00 0.00 36.56 4.06
1452 3333 0.178068 GTGGCCACGACATCTGGTAT 59.822 55.000 22.49 0.00 0.00 2.73
1541 3428 7.996644 ACAAATGAAAGTAGGGAGAGTTAAACA 59.003 33.333 0.00 0.00 0.00 2.83
1585 3477 3.457380 AGATACATGTCACCAGCCAGAAT 59.543 43.478 0.00 0.00 0.00 2.40
1589 3485 2.840038 AGAAGATACATGTCACCAGCCA 59.160 45.455 0.00 0.00 0.00 4.75
1618 3514 4.634184 TCCGAGCACAGTCTCTATAAAC 57.366 45.455 0.00 0.00 0.00 2.01
1634 3532 3.526931 TGTTCTTGCTAGGAATCCGAG 57.473 47.619 4.96 4.96 0.00 4.63
1637 3535 4.156455 TCCATGTTCTTGCTAGGAATCC 57.844 45.455 0.00 0.00 0.00 3.01
1674 3572 3.107601 AGATTCCGATCCACCAGAAGAA 58.892 45.455 0.00 0.00 32.44 2.52
1767 3673 5.369404 ACATGGGTCAAGGGAGAAAATTTTT 59.631 36.000 4.63 0.00 0.00 1.94
1768 3674 4.907269 ACATGGGTCAAGGGAGAAAATTTT 59.093 37.500 2.28 2.28 0.00 1.82
1772 3678 3.611025 AACATGGGTCAAGGGAGAAAA 57.389 42.857 0.00 0.00 0.00 2.29
1777 3683 1.633432 CAGGTAACATGGGTCAAGGGA 59.367 52.381 0.00 0.00 41.41 4.20
1778 3684 1.354368 ACAGGTAACATGGGTCAAGGG 59.646 52.381 0.00 0.00 41.41 3.95
1840 5450 3.724209 CCCCTTCCATCCTATCCTTTCTT 59.276 47.826 0.00 0.00 0.00 2.52
2027 5641 4.020307 TCTCACCAATGTCATGTTGCTCTA 60.020 41.667 0.00 0.00 0.00 2.43
2192 6367 1.454847 TTTGGCAGGCTGTCGGTTT 60.455 52.632 15.29 0.00 0.00 3.27
2193 6368 1.898574 CTTTGGCAGGCTGTCGGTT 60.899 57.895 15.29 0.00 0.00 4.44
2194 6369 2.281761 CTTTGGCAGGCTGTCGGT 60.282 61.111 15.29 0.00 0.00 4.69
2195 6370 0.962356 ATTCTTTGGCAGGCTGTCGG 60.962 55.000 15.29 7.38 0.00 4.79
2196 6371 1.398390 GTATTCTTTGGCAGGCTGTCG 59.602 52.381 15.29 0.00 0.00 4.35
2197 6372 2.716217 AGTATTCTTTGGCAGGCTGTC 58.284 47.619 13.26 13.26 0.00 3.51
2198 6373 2.887151 AGTATTCTTTGGCAGGCTGT 57.113 45.000 17.16 0.00 0.00 4.40
2199 6374 3.609853 TGTAGTATTCTTTGGCAGGCTG 58.390 45.455 10.94 10.94 0.00 4.85
2200 6375 3.519510 TCTGTAGTATTCTTTGGCAGGCT 59.480 43.478 0.00 0.00 0.00 4.58
2201 6376 3.873910 TCTGTAGTATTCTTTGGCAGGC 58.126 45.455 0.00 0.00 0.00 4.85
2202 6377 5.734720 TCTTCTGTAGTATTCTTTGGCAGG 58.265 41.667 0.00 0.00 0.00 4.85
2203 6378 8.200792 AGTATCTTCTGTAGTATTCTTTGGCAG 58.799 37.037 0.00 0.00 0.00 4.85
2204 6379 7.981789 CAGTATCTTCTGTAGTATTCTTTGGCA 59.018 37.037 0.00 0.00 0.00 4.92
2205 6380 8.198109 TCAGTATCTTCTGTAGTATTCTTTGGC 58.802 37.037 0.00 0.00 36.85 4.52
2213 6388 9.823647 CCAACATTTCAGTATCTTCTGTAGTAT 57.176 33.333 0.00 0.00 36.85 2.12
2214 6389 9.031537 TCCAACATTTCAGTATCTTCTGTAGTA 57.968 33.333 0.00 0.00 36.85 1.82
2215 6390 7.907389 TCCAACATTTCAGTATCTTCTGTAGT 58.093 34.615 0.00 0.00 36.85 2.73
2216 6391 7.010923 GCTCCAACATTTCAGTATCTTCTGTAG 59.989 40.741 0.00 0.00 36.85 2.74
2217 6392 6.818644 GCTCCAACATTTCAGTATCTTCTGTA 59.181 38.462 0.00 0.00 36.85 2.74
2218 6393 5.645497 GCTCCAACATTTCAGTATCTTCTGT 59.355 40.000 0.00 0.00 36.85 3.41
2219 6394 5.645067 TGCTCCAACATTTCAGTATCTTCTG 59.355 40.000 0.00 0.00 36.85 3.02
2220 6395 5.809001 TGCTCCAACATTTCAGTATCTTCT 58.191 37.500 0.00 0.00 0.00 2.85
2221 6396 6.317857 GTTGCTCCAACATTTCAGTATCTTC 58.682 40.000 3.40 0.00 43.09 2.87
2222 6397 6.259550 GTTGCTCCAACATTTCAGTATCTT 57.740 37.500 3.40 0.00 43.09 2.40
2223 6398 5.886960 GTTGCTCCAACATTTCAGTATCT 57.113 39.130 3.40 0.00 43.09 1.98
2235 6410 6.403636 CCTTATCACTATGTTGTTGCTCCAAC 60.404 42.308 10.84 10.84 43.78 3.77
2236 6411 5.647658 CCTTATCACTATGTTGTTGCTCCAA 59.352 40.000 0.00 0.00 0.00 3.53
2237 6412 5.185454 CCTTATCACTATGTTGTTGCTCCA 58.815 41.667 0.00 0.00 0.00 3.86
2238 6413 4.035675 GCCTTATCACTATGTTGTTGCTCC 59.964 45.833 0.00 0.00 0.00 4.70
2239 6414 4.878397 AGCCTTATCACTATGTTGTTGCTC 59.122 41.667 0.00 0.00 0.00 4.26
2240 6415 4.848357 AGCCTTATCACTATGTTGTTGCT 58.152 39.130 0.00 0.00 0.00 3.91
2241 6416 4.635765 TGAGCCTTATCACTATGTTGTTGC 59.364 41.667 0.00 0.00 0.00 4.17
2242 6417 6.111768 GTGAGCCTTATCACTATGTTGTTG 57.888 41.667 0.00 0.00 45.03 3.33
2253 6428 5.658634 ACTGACTTCTATGTGAGCCTTATCA 59.341 40.000 0.00 0.00 0.00 2.15
2254 6429 6.155475 ACTGACTTCTATGTGAGCCTTATC 57.845 41.667 0.00 0.00 0.00 1.75
2255 6430 6.070538 ACAACTGACTTCTATGTGAGCCTTAT 60.071 38.462 0.00 0.00 0.00 1.73
2256 6431 5.246203 ACAACTGACTTCTATGTGAGCCTTA 59.754 40.000 0.00 0.00 0.00 2.69
2257 6432 4.040952 ACAACTGACTTCTATGTGAGCCTT 59.959 41.667 0.00 0.00 0.00 4.35
2258 6433 3.580458 ACAACTGACTTCTATGTGAGCCT 59.420 43.478 0.00 0.00 0.00 4.58
2259 6434 3.681897 CACAACTGACTTCTATGTGAGCC 59.318 47.826 0.00 0.00 43.01 4.70
2260 6435 3.124297 GCACAACTGACTTCTATGTGAGC 59.876 47.826 8.27 0.00 43.01 4.26
2261 6436 3.681897 GGCACAACTGACTTCTATGTGAG 59.318 47.826 8.27 0.00 43.01 3.51
2262 6437 3.664107 GGCACAACTGACTTCTATGTGA 58.336 45.455 8.27 0.00 43.01 3.58
2263 6438 2.413112 CGGCACAACTGACTTCTATGTG 59.587 50.000 0.00 0.00 43.17 3.21
2264 6439 2.299013 TCGGCACAACTGACTTCTATGT 59.701 45.455 0.00 0.00 0.00 2.29
2265 6440 2.668457 GTCGGCACAACTGACTTCTATG 59.332 50.000 0.00 0.00 41.79 2.23
2266 6441 2.299013 TGTCGGCACAACTGACTTCTAT 59.701 45.455 6.24 0.00 41.79 1.98
2267 6442 1.684450 TGTCGGCACAACTGACTTCTA 59.316 47.619 6.24 0.00 41.79 2.10
2268 6443 0.464036 TGTCGGCACAACTGACTTCT 59.536 50.000 6.24 0.00 41.79 2.85
2269 6444 1.295792 TTGTCGGCACAACTGACTTC 58.704 50.000 0.00 0.00 41.79 3.01
2270 6445 1.745232 TTTGTCGGCACAACTGACTT 58.255 45.000 0.00 0.00 42.46 3.01
2271 6446 1.745232 TTTTGTCGGCACAACTGACT 58.255 45.000 0.00 0.00 42.46 3.41
2272 6447 2.032799 TCATTTTGTCGGCACAACTGAC 59.967 45.455 0.00 0.00 42.46 3.51
2273 6448 2.290367 CTCATTTTGTCGGCACAACTGA 59.710 45.455 0.00 0.00 42.46 3.41
2274 6449 2.033299 ACTCATTTTGTCGGCACAACTG 59.967 45.455 0.00 0.00 42.46 3.16
2275 6450 2.033299 CACTCATTTTGTCGGCACAACT 59.967 45.455 0.00 0.00 42.46 3.16
2276 6451 2.032799 TCACTCATTTTGTCGGCACAAC 59.967 45.455 0.00 0.00 42.46 3.32
2277 6452 2.293170 TCACTCATTTTGTCGGCACAA 58.707 42.857 0.00 0.00 40.97 3.33
2278 6453 1.960417 TCACTCATTTTGTCGGCACA 58.040 45.000 0.00 0.00 0.00 4.57
2279 6454 2.290641 ACTTCACTCATTTTGTCGGCAC 59.709 45.455 0.00 0.00 0.00 5.01
2280 6455 2.290367 CACTTCACTCATTTTGTCGGCA 59.710 45.455 0.00 0.00 0.00 5.69
2281 6456 2.918131 GCACTTCACTCATTTTGTCGGC 60.918 50.000 0.00 0.00 0.00 5.54
2282 6457 2.549754 AGCACTTCACTCATTTTGTCGG 59.450 45.455 0.00 0.00 0.00 4.79
2283 6458 3.496130 AGAGCACTTCACTCATTTTGTCG 59.504 43.478 0.00 0.00 36.58 4.35
2284 6459 6.369890 TCATAGAGCACTTCACTCATTTTGTC 59.630 38.462 0.00 0.00 36.58 3.18
2285 6460 6.233434 TCATAGAGCACTTCACTCATTTTGT 58.767 36.000 0.00 0.00 36.58 2.83
2286 6461 6.732531 TCATAGAGCACTTCACTCATTTTG 57.267 37.500 0.00 0.00 36.58 2.44
2287 6462 7.108194 TCATCATAGAGCACTTCACTCATTTT 58.892 34.615 0.00 0.00 36.58 1.82
2288 6463 6.647229 TCATCATAGAGCACTTCACTCATTT 58.353 36.000 0.00 0.00 36.58 2.32
2289 6464 6.231258 TCATCATAGAGCACTTCACTCATT 57.769 37.500 0.00 0.00 36.58 2.57
2290 6465 5.866159 TCATCATAGAGCACTTCACTCAT 57.134 39.130 0.00 0.00 36.58 2.90
2291 6466 5.866159 ATCATCATAGAGCACTTCACTCA 57.134 39.130 0.00 0.00 36.58 3.41
2292 6467 7.205992 TGTTATCATCATAGAGCACTTCACTC 58.794 38.462 0.00 0.00 0.00 3.51
2293 6468 7.117285 TGTTATCATCATAGAGCACTTCACT 57.883 36.000 0.00 0.00 0.00 3.41
2294 6469 7.776933 TTGTTATCATCATAGAGCACTTCAC 57.223 36.000 0.00 0.00 0.00 3.18
2295 6470 9.481340 GTATTGTTATCATCATAGAGCACTTCA 57.519 33.333 0.00 0.00 0.00 3.02
2296 6471 8.930760 GGTATTGTTATCATCATAGAGCACTTC 58.069 37.037 0.00 0.00 0.00 3.01
2297 6472 8.654997 AGGTATTGTTATCATCATAGAGCACTT 58.345 33.333 0.00 0.00 0.00 3.16
2298 6473 8.200024 AGGTATTGTTATCATCATAGAGCACT 57.800 34.615 0.00 0.00 0.00 4.40
2299 6474 8.715998 CAAGGTATTGTTATCATCATAGAGCAC 58.284 37.037 0.00 0.00 0.00 4.40
2300 6475 8.650490 TCAAGGTATTGTTATCATCATAGAGCA 58.350 33.333 0.00 0.00 37.68 4.26
2301 6476 9.494271 TTCAAGGTATTGTTATCATCATAGAGC 57.506 33.333 0.00 0.00 37.68 4.09
2307 6482 9.958180 TTCTTCTTCAAGGTATTGTTATCATCA 57.042 29.630 0.00 0.00 37.68 3.07
2315 6490 9.965902 AGATTGTATTCTTCTTCAAGGTATTGT 57.034 29.630 0.00 0.00 37.68 2.71
2317 6492 9.965902 ACAGATTGTATTCTTCTTCAAGGTATT 57.034 29.630 0.00 0.00 0.00 1.89
2318 6493 9.388506 CACAGATTGTATTCTTCTTCAAGGTAT 57.611 33.333 0.00 0.00 0.00 2.73
2319 6494 7.824289 CCACAGATTGTATTCTTCTTCAAGGTA 59.176 37.037 0.00 0.00 0.00 3.08
2320 6495 6.656693 CCACAGATTGTATTCTTCTTCAAGGT 59.343 38.462 0.00 0.00 0.00 3.50
2321 6496 6.656693 ACCACAGATTGTATTCTTCTTCAAGG 59.343 38.462 0.00 0.00 0.00 3.61
2322 6497 7.361542 CCACCACAGATTGTATTCTTCTTCAAG 60.362 40.741 0.00 0.00 0.00 3.02
2323 6498 6.430925 CCACCACAGATTGTATTCTTCTTCAA 59.569 38.462 0.00 0.00 0.00 2.69
2324 6499 5.939883 CCACCACAGATTGTATTCTTCTTCA 59.060 40.000 0.00 0.00 0.00 3.02
2325 6500 5.355350 CCCACCACAGATTGTATTCTTCTTC 59.645 44.000 0.00 0.00 0.00 2.87
2326 6501 5.014123 TCCCACCACAGATTGTATTCTTCTT 59.986 40.000 0.00 0.00 0.00 2.52
2327 6502 4.536090 TCCCACCACAGATTGTATTCTTCT 59.464 41.667 0.00 0.00 0.00 2.85
2328 6503 4.843728 TCCCACCACAGATTGTATTCTTC 58.156 43.478 0.00 0.00 0.00 2.87
2329 6504 4.927267 TCCCACCACAGATTGTATTCTT 57.073 40.909 0.00 0.00 0.00 2.52
2330 6505 4.324563 CCTTCCCACCACAGATTGTATTCT 60.325 45.833 0.00 0.00 0.00 2.40
2331 6506 3.947834 CCTTCCCACCACAGATTGTATTC 59.052 47.826 0.00 0.00 0.00 1.75
2332 6507 3.333680 ACCTTCCCACCACAGATTGTATT 59.666 43.478 0.00 0.00 0.00 1.89
2333 6508 2.919602 ACCTTCCCACCACAGATTGTAT 59.080 45.455 0.00 0.00 0.00 2.29
2334 6509 2.344592 ACCTTCCCACCACAGATTGTA 58.655 47.619 0.00 0.00 0.00 2.41
2335 6510 1.149101 ACCTTCCCACCACAGATTGT 58.851 50.000 0.00 0.00 0.00 2.71
2336 6511 1.888512 CAACCTTCCCACCACAGATTG 59.111 52.381 0.00 0.00 0.00 2.67
2337 6512 1.823250 GCAACCTTCCCACCACAGATT 60.823 52.381 0.00 0.00 0.00 2.40
2338 6513 0.251341 GCAACCTTCCCACCACAGAT 60.251 55.000 0.00 0.00 0.00 2.90
2339 6514 1.150536 GCAACCTTCCCACCACAGA 59.849 57.895 0.00 0.00 0.00 3.41
2340 6515 0.400213 TAGCAACCTTCCCACCACAG 59.600 55.000 0.00 0.00 0.00 3.66
2341 6516 1.072266 ATAGCAACCTTCCCACCACA 58.928 50.000 0.00 0.00 0.00 4.17
2342 6517 2.504175 TCTATAGCAACCTTCCCACCAC 59.496 50.000 0.00 0.00 0.00 4.16
2343 6518 2.771943 CTCTATAGCAACCTTCCCACCA 59.228 50.000 0.00 0.00 0.00 4.17
2344 6519 2.772515 ACTCTATAGCAACCTTCCCACC 59.227 50.000 0.00 0.00 0.00 4.61
2345 6520 3.798202 CACTCTATAGCAACCTTCCCAC 58.202 50.000 0.00 0.00 0.00 4.61
2346 6521 2.170607 GCACTCTATAGCAACCTTCCCA 59.829 50.000 0.00 0.00 0.00 4.37
2347 6522 2.485657 GGCACTCTATAGCAACCTTCCC 60.486 54.545 0.00 0.00 0.00 3.97
2348 6523 2.170607 TGGCACTCTATAGCAACCTTCC 59.829 50.000 0.00 0.00 0.00 3.46
2349 6524 3.118592 AGTGGCACTCTATAGCAACCTTC 60.119 47.826 15.88 0.00 35.24 3.46
2350 6525 2.840651 AGTGGCACTCTATAGCAACCTT 59.159 45.455 15.88 0.00 35.24 3.50
2351 6526 2.472029 AGTGGCACTCTATAGCAACCT 58.528 47.619 15.88 0.00 35.24 3.50
2352 6527 2.939103 CAAGTGGCACTCTATAGCAACC 59.061 50.000 22.31 0.00 35.24 3.77
2353 6528 2.939103 CCAAGTGGCACTCTATAGCAAC 59.061 50.000 22.31 0.00 34.87 4.17
2354 6529 3.266510 CCAAGTGGCACTCTATAGCAA 57.733 47.619 22.31 0.00 0.00 3.91
2355 6530 2.988010 CCAAGTGGCACTCTATAGCA 57.012 50.000 22.31 0.00 0.00 3.49
2367 6542 9.965824 CTTTTATTATGTAATAAGGCCAAGTGG 57.034 33.333 5.01 0.00 42.97 4.00
2382 6557 9.606631 CTCCTAGCTTCTGAACTTTTATTATGT 57.393 33.333 0.00 0.00 0.00 2.29
2383 6558 9.606631 ACTCCTAGCTTCTGAACTTTTATTATG 57.393 33.333 0.00 0.00 0.00 1.90
2386 6561 9.438228 GTTACTCCTAGCTTCTGAACTTTTATT 57.562 33.333 0.00 0.00 0.00 1.40
2387 6562 7.760340 CGTTACTCCTAGCTTCTGAACTTTTAT 59.240 37.037 0.00 0.00 0.00 1.40
2388 6563 7.088905 CGTTACTCCTAGCTTCTGAACTTTTA 58.911 38.462 0.00 0.00 0.00 1.52
2389 6564 5.927115 CGTTACTCCTAGCTTCTGAACTTTT 59.073 40.000 0.00 0.00 0.00 2.27
2390 6565 5.471257 CGTTACTCCTAGCTTCTGAACTTT 58.529 41.667 0.00 0.00 0.00 2.66
2391 6566 4.618693 GCGTTACTCCTAGCTTCTGAACTT 60.619 45.833 0.00 0.00 0.00 2.66
2392 6567 3.119424 GCGTTACTCCTAGCTTCTGAACT 60.119 47.826 0.00 0.00 0.00 3.01
2393 6568 3.180613 GCGTTACTCCTAGCTTCTGAAC 58.819 50.000 0.00 0.00 0.00 3.18
2394 6569 2.165845 GGCGTTACTCCTAGCTTCTGAA 59.834 50.000 0.00 0.00 0.00 3.02
2395 6570 1.749634 GGCGTTACTCCTAGCTTCTGA 59.250 52.381 0.00 0.00 0.00 3.27
2396 6571 1.476891 TGGCGTTACTCCTAGCTTCTG 59.523 52.381 0.00 0.00 0.00 3.02
2397 6572 1.848652 TGGCGTTACTCCTAGCTTCT 58.151 50.000 0.00 0.00 0.00 2.85
2398 6573 2.892784 ATGGCGTTACTCCTAGCTTC 57.107 50.000 0.00 0.00 0.00 3.86
2399 6574 3.055385 TGAAATGGCGTTACTCCTAGCTT 60.055 43.478 0.00 0.00 0.00 3.74
2400 6575 2.500098 TGAAATGGCGTTACTCCTAGCT 59.500 45.455 0.00 0.00 0.00 3.32
2401 6576 2.901249 TGAAATGGCGTTACTCCTAGC 58.099 47.619 0.00 0.00 0.00 3.42
2402 6577 4.950050 AGATGAAATGGCGTTACTCCTAG 58.050 43.478 0.00 0.00 0.00 3.02
2403 6578 4.202223 GGAGATGAAATGGCGTTACTCCTA 60.202 45.833 18.67 0.00 39.36 2.94
2404 6579 3.432326 GGAGATGAAATGGCGTTACTCCT 60.432 47.826 18.67 6.08 39.36 3.69
2405 6580 2.872858 GGAGATGAAATGGCGTTACTCC 59.127 50.000 14.36 14.36 36.41 3.85
2406 6581 3.531538 TGGAGATGAAATGGCGTTACTC 58.468 45.455 0.00 0.50 0.00 2.59
2407 6582 3.627395 TGGAGATGAAATGGCGTTACT 57.373 42.857 0.00 0.00 0.00 2.24
2408 6583 4.601019 CATTGGAGATGAAATGGCGTTAC 58.399 43.478 0.00 0.00 31.46 2.50
2409 6584 3.066621 GCATTGGAGATGAAATGGCGTTA 59.933 43.478 0.00 0.00 34.90 3.18
2410 6585 2.159198 GCATTGGAGATGAAATGGCGTT 60.159 45.455 0.00 0.00 34.90 4.84
2411 6586 1.406539 GCATTGGAGATGAAATGGCGT 59.593 47.619 0.00 0.00 34.90 5.68
2412 6587 1.406180 TGCATTGGAGATGAAATGGCG 59.594 47.619 0.00 0.00 34.90 5.69
2413 6588 2.691526 TCTGCATTGGAGATGAAATGGC 59.308 45.455 3.46 0.00 34.90 4.40
2414 6589 4.202121 CCTTCTGCATTGGAGATGAAATGG 60.202 45.833 18.69 7.63 34.90 3.16
2415 6590 4.401519 ACCTTCTGCATTGGAGATGAAATG 59.598 41.667 18.69 7.67 36.95 2.32
2416 6591 4.607239 ACCTTCTGCATTGGAGATGAAAT 58.393 39.130 18.69 5.16 0.00 2.17
2417 6592 4.038271 ACCTTCTGCATTGGAGATGAAA 57.962 40.909 18.69 0.78 0.00 2.69
2418 6593 3.726557 ACCTTCTGCATTGGAGATGAA 57.273 42.857 18.69 1.10 0.00 2.57
2419 6594 5.128205 CAATACCTTCTGCATTGGAGATGA 58.872 41.667 18.69 1.75 0.00 2.92
2420 6595 4.261489 GCAATACCTTCTGCATTGGAGATG 60.261 45.833 8.81 10.87 38.48 2.90
2421 6596 3.887716 GCAATACCTTCTGCATTGGAGAT 59.112 43.478 8.81 0.00 38.48 2.75
2422 6597 3.054139 AGCAATACCTTCTGCATTGGAGA 60.054 43.478 3.46 3.46 41.17 3.71
2423 6598 3.066342 CAGCAATACCTTCTGCATTGGAG 59.934 47.826 0.00 0.00 41.17 3.86
2424 6599 3.018856 CAGCAATACCTTCTGCATTGGA 58.981 45.455 6.75 0.00 41.17 3.53
2425 6600 2.756760 ACAGCAATACCTTCTGCATTGG 59.243 45.455 0.00 0.00 41.17 3.16
2426 6601 4.445452 AACAGCAATACCTTCTGCATTG 57.555 40.909 0.00 0.00 41.17 2.82
2427 6602 6.780457 AATAACAGCAATACCTTCTGCATT 57.220 33.333 0.00 0.00 41.17 3.56
2428 6603 8.469309 AATAATAACAGCAATACCTTCTGCAT 57.531 30.769 0.00 0.00 41.17 3.96
2429 6604 7.880160 AATAATAACAGCAATACCTTCTGCA 57.120 32.000 0.00 0.00 41.17 4.41
2430 6605 8.624776 AGAAATAATAACAGCAATACCTTCTGC 58.375 33.333 0.00 0.00 38.91 4.26
2434 6609 9.627123 TGCTAGAAATAATAACAGCAATACCTT 57.373 29.630 0.00 0.00 36.18 3.50
2435 6610 9.057089 GTGCTAGAAATAATAACAGCAATACCT 57.943 33.333 0.00 0.00 40.41 3.08
2436 6611 8.836413 TGTGCTAGAAATAATAACAGCAATACC 58.164 33.333 0.00 0.00 40.41 2.73
2439 6614 9.740239 CAATGTGCTAGAAATAATAACAGCAAT 57.260 29.630 0.00 0.00 40.41 3.56
2440 6615 8.190122 CCAATGTGCTAGAAATAATAACAGCAA 58.810 33.333 0.00 0.00 40.41 3.91
2441 6616 7.681782 GCCAATGTGCTAGAAATAATAACAGCA 60.682 37.037 0.00 0.00 36.72 4.41
2442 6617 6.638468 GCCAATGTGCTAGAAATAATAACAGC 59.362 38.462 0.00 0.00 0.00 4.40
2443 6618 7.141363 GGCCAATGTGCTAGAAATAATAACAG 58.859 38.462 0.00 0.00 0.00 3.16
2444 6619 6.040391 GGGCCAATGTGCTAGAAATAATAACA 59.960 38.462 4.39 0.00 0.00 2.41
2445 6620 6.040391 TGGGCCAATGTGCTAGAAATAATAAC 59.960 38.462 2.13 0.00 0.00 1.89
2446 6621 6.132658 TGGGCCAATGTGCTAGAAATAATAA 58.867 36.000 2.13 0.00 0.00 1.40
2447 6622 5.700183 TGGGCCAATGTGCTAGAAATAATA 58.300 37.500 2.13 0.00 0.00 0.98
2448 6623 4.545678 TGGGCCAATGTGCTAGAAATAAT 58.454 39.130 2.13 0.00 0.00 1.28
2449 6624 3.974719 TGGGCCAATGTGCTAGAAATAA 58.025 40.909 2.13 0.00 0.00 1.40
2450 6625 3.660970 TGGGCCAATGTGCTAGAAATA 57.339 42.857 2.13 0.00 0.00 1.40
2451 6626 2.530460 TGGGCCAATGTGCTAGAAAT 57.470 45.000 2.13 0.00 0.00 2.17
2452 6627 2.170166 CTTGGGCCAATGTGCTAGAAA 58.830 47.619 21.25 0.00 0.00 2.52
2453 6628 1.838112 CTTGGGCCAATGTGCTAGAA 58.162 50.000 21.25 0.00 0.00 2.10
2454 6629 0.680921 GCTTGGGCCAATGTGCTAGA 60.681 55.000 21.25 0.00 0.00 2.43
2455 6630 0.966875 TGCTTGGGCCAATGTGCTAG 60.967 55.000 21.25 7.13 37.74 3.42
2456 6631 0.966875 CTGCTTGGGCCAATGTGCTA 60.967 55.000 21.25 9.64 37.74 3.49
2457 6632 2.203669 TGCTTGGGCCAATGTGCT 60.204 55.556 21.25 0.00 37.74 4.40
2458 6633 2.263540 CTGCTTGGGCCAATGTGC 59.736 61.111 21.25 19.95 37.74 4.57
2459 6634 2.263540 GCTGCTTGGGCCAATGTG 59.736 61.111 21.25 9.67 37.74 3.21
2460 6635 2.118951 AGCTGCTTGGGCCAATGT 59.881 55.556 21.25 0.00 37.74 2.71
2461 6636 2.577059 CAGCTGCTTGGGCCAATG 59.423 61.111 21.25 14.71 37.74 2.82
2462 6637 3.387947 GCAGCTGCTTGGGCCAAT 61.388 61.111 31.33 0.46 38.21 3.16
2463 6638 4.918278 TGCAGCTGCTTGGGCCAA 62.918 61.111 36.61 19.68 42.66 4.52
2467 6642 4.034258 CACGTGCAGCTGCTTGGG 62.034 66.667 36.61 26.28 42.66 4.12
2468 6643 4.695231 GCACGTGCAGCTGCTTGG 62.695 66.667 36.61 26.57 42.66 3.61
2478 6653 2.032550 AGAATAATGATGCTGCACGTGC 59.967 45.455 33.11 33.11 42.50 5.34
2479 6654 3.558829 AGAGAATAATGATGCTGCACGTG 59.441 43.478 12.28 12.28 0.00 4.49
2480 6655 3.801698 AGAGAATAATGATGCTGCACGT 58.198 40.909 3.57 0.00 0.00 4.49
2481 6656 4.524749 CAAGAGAATAATGATGCTGCACG 58.475 43.478 3.57 0.00 0.00 5.34
2482 6657 4.577693 TCCAAGAGAATAATGATGCTGCAC 59.422 41.667 3.57 0.00 0.00 4.57
2483 6658 4.784177 TCCAAGAGAATAATGATGCTGCA 58.216 39.130 4.13 4.13 0.00 4.41
2484 6659 5.961396 ATCCAAGAGAATAATGATGCTGC 57.039 39.130 0.00 0.00 0.00 5.25
2536 6711 9.515226 AGCTCACTTATAATCACTTTTTGGTAA 57.485 29.630 0.00 0.00 0.00 2.85
2538 6713 9.167311 CTAGCTCACTTATAATCACTTTTTGGT 57.833 33.333 0.00 0.00 0.00 3.67
2539 6714 9.383519 TCTAGCTCACTTATAATCACTTTTTGG 57.616 33.333 0.00 0.00 0.00 3.28
2543 6718 9.944376 TGTTTCTAGCTCACTTATAATCACTTT 57.056 29.630 0.00 0.00 0.00 2.66
2545 6720 9.539825 CATGTTTCTAGCTCACTTATAATCACT 57.460 33.333 0.00 0.00 0.00 3.41
2546 6721 9.319143 ACATGTTTCTAGCTCACTTATAATCAC 57.681 33.333 0.00 0.00 0.00 3.06
2547 6722 9.890629 AACATGTTTCTAGCTCACTTATAATCA 57.109 29.630 4.92 0.00 0.00 2.57
2605 6780 6.873076 CCAGCTATAATCAAAGCAACCAAAAA 59.127 34.615 0.00 0.00 41.32 1.94
2606 6781 6.014669 ACCAGCTATAATCAAAGCAACCAAAA 60.015 34.615 0.00 0.00 41.32 2.44
2607 6782 5.480073 ACCAGCTATAATCAAAGCAACCAAA 59.520 36.000 0.00 0.00 41.32 3.28
2608 6783 5.016173 ACCAGCTATAATCAAAGCAACCAA 58.984 37.500 0.00 0.00 41.32 3.67
2609 6784 4.398988 CACCAGCTATAATCAAAGCAACCA 59.601 41.667 0.00 0.00 41.32 3.67
2610 6785 4.202050 CCACCAGCTATAATCAAAGCAACC 60.202 45.833 0.00 0.00 41.32 3.77
2611 6786 4.640201 TCCACCAGCTATAATCAAAGCAAC 59.360 41.667 0.00 0.00 41.32 4.17
2612 6787 4.854173 TCCACCAGCTATAATCAAAGCAA 58.146 39.130 0.00 0.00 41.32 3.91
2613 6788 4.502105 TCCACCAGCTATAATCAAAGCA 57.498 40.909 0.00 0.00 41.32 3.91
2614 6789 5.835113 TTTCCACCAGCTATAATCAAAGC 57.165 39.130 0.00 0.00 39.08 3.51
2615 6790 6.128007 ACGTTTTCCACCAGCTATAATCAAAG 60.128 38.462 0.00 0.00 0.00 2.77
2616 6791 5.708230 ACGTTTTCCACCAGCTATAATCAAA 59.292 36.000 0.00 0.00 0.00 2.69
2617 6792 5.250200 ACGTTTTCCACCAGCTATAATCAA 58.750 37.500 0.00 0.00 0.00 2.57
2618 6793 4.839121 ACGTTTTCCACCAGCTATAATCA 58.161 39.130 0.00 0.00 0.00 2.57
2619 6794 6.482308 ACATACGTTTTCCACCAGCTATAATC 59.518 38.462 0.00 0.00 0.00 1.75
2620 6795 6.354130 ACATACGTTTTCCACCAGCTATAAT 58.646 36.000 0.00 0.00 0.00 1.28
2621 6796 5.736813 ACATACGTTTTCCACCAGCTATAA 58.263 37.500 0.00 0.00 0.00 0.98
2622 6797 5.347620 ACATACGTTTTCCACCAGCTATA 57.652 39.130 0.00 0.00 0.00 1.31
2623 6798 4.216411 ACATACGTTTTCCACCAGCTAT 57.784 40.909 0.00 0.00 0.00 2.97
2624 6799 3.688694 ACATACGTTTTCCACCAGCTA 57.311 42.857 0.00 0.00 0.00 3.32
2625 6800 2.561478 ACATACGTTTTCCACCAGCT 57.439 45.000 0.00 0.00 0.00 4.24
2626 6801 4.957759 ATTACATACGTTTTCCACCAGC 57.042 40.909 0.00 0.00 0.00 4.85
2627 6802 6.737254 AGAATTACATACGTTTTCCACCAG 57.263 37.500 0.00 0.00 0.00 4.00
2628 6803 8.795842 ATTAGAATTACATACGTTTTCCACCA 57.204 30.769 0.00 0.00 0.00 4.17
2637 6812 9.760077 CCCAAAGACTATTAGAATTACATACGT 57.240 33.333 0.00 0.00 0.00 3.57
2638 6813 9.976511 TCCCAAAGACTATTAGAATTACATACG 57.023 33.333 0.00 0.00 0.00 3.06
2653 6828 9.174166 GCTTTTCATATAGTTTCCCAAAGACTA 57.826 33.333 0.00 0.00 0.00 2.59
2654 6829 7.148239 CGCTTTTCATATAGTTTCCCAAAGACT 60.148 37.037 0.00 0.00 0.00 3.24
2655 6830 6.967199 CGCTTTTCATATAGTTTCCCAAAGAC 59.033 38.462 0.00 0.00 0.00 3.01
2656 6831 6.657541 ACGCTTTTCATATAGTTTCCCAAAGA 59.342 34.615 0.00 0.00 0.00 2.52
2657 6832 6.852664 ACGCTTTTCATATAGTTTCCCAAAG 58.147 36.000 0.00 0.00 0.00 2.77
2658 6833 6.827586 ACGCTTTTCATATAGTTTCCCAAA 57.172 33.333 0.00 0.00 0.00 3.28
2659 6834 7.390996 TGTTACGCTTTTCATATAGTTTCCCAA 59.609 33.333 0.00 0.00 0.00 4.12
2660 6835 6.879993 TGTTACGCTTTTCATATAGTTTCCCA 59.120 34.615 0.00 0.00 0.00 4.37
2661 6836 7.311364 TGTTACGCTTTTCATATAGTTTCCC 57.689 36.000 0.00 0.00 0.00 3.97
2662 6837 9.783256 AAATGTTACGCTTTTCATATAGTTTCC 57.217 29.630 0.00 0.00 0.00 3.13
2677 6852 9.615295 ACGAAAAATTATGTTAAATGTTACGCT 57.385 25.926 0.00 0.00 0.00 5.07
2678 6853 9.651531 CACGAAAAATTATGTTAAATGTTACGC 57.348 29.630 0.00 0.00 0.00 4.42
2686 6861 9.239002 CCAGTTGTCACGAAAAATTATGTTAAA 57.761 29.630 0.00 0.00 0.00 1.52
2687 6862 8.622157 TCCAGTTGTCACGAAAAATTATGTTAA 58.378 29.630 0.00 0.00 0.00 2.01
2688 6863 8.155821 TCCAGTTGTCACGAAAAATTATGTTA 57.844 30.769 0.00 0.00 0.00 2.41
2689 6864 7.033530 TCCAGTTGTCACGAAAAATTATGTT 57.966 32.000 0.00 0.00 0.00 2.71
2690 6865 6.627395 TCCAGTTGTCACGAAAAATTATGT 57.373 33.333 0.00 0.00 0.00 2.29
2691 6866 8.519492 AATTCCAGTTGTCACGAAAAATTATG 57.481 30.769 0.00 0.00 0.00 1.90
2692 6867 8.576442 AGAATTCCAGTTGTCACGAAAAATTAT 58.424 29.630 0.65 0.00 0.00 1.28
2693 6868 7.860373 CAGAATTCCAGTTGTCACGAAAAATTA 59.140 33.333 0.65 0.00 0.00 1.40
2694 6869 6.697019 CAGAATTCCAGTTGTCACGAAAAATT 59.303 34.615 0.65 0.00 0.00 1.82
2695 6870 6.183360 ACAGAATTCCAGTTGTCACGAAAAAT 60.183 34.615 0.65 0.00 0.00 1.82
2696 6871 5.124776 ACAGAATTCCAGTTGTCACGAAAAA 59.875 36.000 0.65 0.00 0.00 1.94
2697 6872 4.638421 ACAGAATTCCAGTTGTCACGAAAA 59.362 37.500 0.65 0.00 0.00 2.29
2698 6873 4.196193 ACAGAATTCCAGTTGTCACGAAA 58.804 39.130 0.65 0.00 0.00 3.46
2699 6874 3.804036 ACAGAATTCCAGTTGTCACGAA 58.196 40.909 0.65 0.00 0.00 3.85
2700 6875 3.469008 ACAGAATTCCAGTTGTCACGA 57.531 42.857 0.65 0.00 0.00 4.35
2701 6876 5.440685 GTTAACAGAATTCCAGTTGTCACG 58.559 41.667 18.89 0.00 0.00 4.35
2702 6877 5.298276 TGGTTAACAGAATTCCAGTTGTCAC 59.702 40.000 18.89 13.61 0.00 3.67
2703 6878 5.441500 TGGTTAACAGAATTCCAGTTGTCA 58.558 37.500 18.89 12.85 0.00 3.58
2704 6879 6.039382 ACTTGGTTAACAGAATTCCAGTTGTC 59.961 38.462 18.89 12.90 0.00 3.18
2705 6880 5.891551 ACTTGGTTAACAGAATTCCAGTTGT 59.108 36.000 18.89 7.90 0.00 3.32
2706 6881 6.391227 ACTTGGTTAACAGAATTCCAGTTG 57.609 37.500 18.89 7.34 0.00 3.16
2707 6882 7.057894 TGTACTTGGTTAACAGAATTCCAGTT 58.942 34.615 15.56 15.56 0.00 3.16
2708 6883 6.597562 TGTACTTGGTTAACAGAATTCCAGT 58.402 36.000 8.10 0.00 0.00 4.00
2709 6884 7.504924 TTGTACTTGGTTAACAGAATTCCAG 57.495 36.000 8.10 0.00 0.00 3.86
2710 6885 8.472007 AATTGTACTTGGTTAACAGAATTCCA 57.528 30.769 8.10 0.00 0.00 3.53
2749 6924 6.312672 TGTTTCATTGACCACGTATATCAGTG 59.687 38.462 10.36 10.36 38.05 3.66
2750 6925 6.312918 GTGTTTCATTGACCACGTATATCAGT 59.687 38.462 0.00 0.00 0.00 3.41
2751 6926 6.535150 AGTGTTTCATTGACCACGTATATCAG 59.465 38.462 9.01 0.00 33.14 2.90
2752 6927 6.403049 AGTGTTTCATTGACCACGTATATCA 58.597 36.000 9.01 0.00 33.14 2.15
2753 6928 6.903883 AGTGTTTCATTGACCACGTATATC 57.096 37.500 9.01 0.00 33.14 1.63
2759 6934 2.805671 TGCTAGTGTTTCATTGACCACG 59.194 45.455 9.01 0.00 33.14 4.94
2764 6939 8.196771 AGAACAAAAATGCTAGTGTTTCATTGA 58.803 29.630 10.61 0.00 34.44 2.57
2838 7018 3.881220 ACCAAGACGAGGAAAAACAAGA 58.119 40.909 0.00 0.00 0.00 3.02
2842 7022 5.049886 ACGAAATACCAAGACGAGGAAAAAC 60.050 40.000 0.00 0.00 0.00 2.43
2848 7028 6.976925 AGTAAATACGAAATACCAAGACGAGG 59.023 38.462 0.00 0.00 0.00 4.63
2903 7083 0.898320 CAGGACGAGGACAGACCATT 59.102 55.000 0.00 0.00 42.04 3.16
2907 7087 0.109039 GAAGCAGGACGAGGACAGAC 60.109 60.000 0.00 0.00 0.00 3.51
2917 7097 1.004745 TGGGATTGAAGGAAGCAGGAC 59.995 52.381 0.00 0.00 0.00 3.85
2918 7098 1.371467 TGGGATTGAAGGAAGCAGGA 58.629 50.000 0.00 0.00 0.00 3.86
2937 7117 6.702329 CCTCTAGAAATCGGCATATAACCTT 58.298 40.000 0.00 0.00 0.00 3.50
2942 7122 5.949952 TGTAGCCTCTAGAAATCGGCATATA 59.050 40.000 19.67 4.38 44.85 0.86
2944 7124 4.149598 TGTAGCCTCTAGAAATCGGCATA 58.850 43.478 19.67 8.80 44.85 3.14
2990 7343 4.758165 TGGAAAACGGAATTGTAAGGAGAC 59.242 41.667 0.00 0.00 0.00 3.36
2995 7348 9.801873 AAATATGATGGAAAACGGAATTGTAAG 57.198 29.630 0.00 0.00 0.00 2.34
3127 7480 6.458232 TTGTAGCCTTTAAAGTTGAGCAAA 57.542 33.333 14.03 4.35 0.00 3.68
3131 7484 7.522374 GTCAGATTGTAGCCTTTAAAGTTGAG 58.478 38.462 14.03 0.02 0.00 3.02
3135 7488 5.548406 ACGTCAGATTGTAGCCTTTAAAGT 58.452 37.500 14.03 0.00 0.00 2.66
3144 7497 6.904498 AGTATGAGATACGTCAGATTGTAGC 58.096 40.000 0.00 0.00 40.64 3.58
3154 7507 6.812160 ACAAACTTCCAAGTATGAGATACGTC 59.188 38.462 0.00 0.00 40.64 4.34
3156 7509 6.811665 TGACAAACTTCCAAGTATGAGATACG 59.188 38.462 0.00 0.00 40.64 3.06
3160 7513 6.826668 TCTTGACAAACTTCCAAGTATGAGA 58.173 36.000 0.00 0.00 38.57 3.27
3161 7514 7.496529 TTCTTGACAAACTTCCAAGTATGAG 57.503 36.000 0.00 0.00 38.57 2.90
3207 7565 9.589111 TTCACATAATATAAGTGAAGTTACGCA 57.411 29.630 11.36 0.00 44.60 5.24
3229 7589 9.612620 CATATCCAAAGTAAAGTTCACTTTCAC 57.387 33.333 8.22 6.19 42.79 3.18
3297 7658 2.563798 CGCAAAGGGCCTCTGCAAA 61.564 57.895 29.90 0.00 40.31 3.68
3377 7738 4.228210 TCTGCTCATGGACTTCCCTAAAAT 59.772 41.667 0.00 0.00 35.38 1.82
3471 7832 2.324541 ACATGAGCACTAGATCCCTCC 58.675 52.381 0.00 0.00 0.00 4.30
3489 7850 5.594725 TGGTTGCTTTGTATTTACCTCAACA 59.405 36.000 0.00 0.00 35.57 3.33
3501 7862 4.584638 AGTATGGGATGGTTGCTTTGTA 57.415 40.909 0.00 0.00 0.00 2.41
3522 7883 8.505246 TGGATACAGGAGGTAAACTACTATGTA 58.495 37.037 0.00 0.00 46.17 2.29
3545 7909 3.795688 AACTTCTGAGAAAGGCATGGA 57.204 42.857 0.00 0.00 0.00 3.41
3569 7937 0.814010 AAGCGGTTGGTGTGTGTCTC 60.814 55.000 0.00 0.00 0.00 3.36
3641 8009 3.319198 GGGCTTCTGGTCCACCGA 61.319 66.667 0.00 0.00 40.02 4.69
3776 8144 0.038744 CTTCCCTCCTGGCAATGTGT 59.961 55.000 0.00 0.00 0.00 3.72
3993 9095 1.136085 CCGTTGTAAATGTCGTGCTGG 60.136 52.381 0.00 0.00 0.00 4.85
4062 9169 6.738114 TCAGTTTTGCAGTAAATTTCAGAGG 58.262 36.000 0.00 0.00 0.00 3.69
4135 9246 5.123820 GCTCATGTTGTTCCTTGTAATGCTA 59.876 40.000 0.00 0.00 0.00 3.49
4184 9299 2.299013 CGCATATGTGTAAGGCCCTCTA 59.701 50.000 8.16 0.00 0.00 2.43
4189 9304 0.588252 CAGCGCATATGTGTAAGGCC 59.412 55.000 17.22 0.00 0.00 5.19
4319 9434 7.433719 TCACAATTTATGCAAAGTTACACACAC 59.566 33.333 0.00 0.00 0.00 3.82
4330 9453 6.294453 CCACTACACCTCACAATTTATGCAAA 60.294 38.462 0.00 0.00 0.00 3.68
4332 9455 4.699735 CCACTACACCTCACAATTTATGCA 59.300 41.667 0.00 0.00 0.00 3.96
4342 9465 6.694447 TCTAAACATAACCACTACACCTCAC 58.306 40.000 0.00 0.00 0.00 3.51
4377 9500 6.365789 CGGAATCTGCATCTAGAAGAAGAATC 59.634 42.308 9.69 10.55 34.86 2.52
4401 9524 0.248054 AAAACACAGCACAGCGAACG 60.248 50.000 0.00 0.00 0.00 3.95
4467 9598 5.780282 AGTTAATTTTCTTCAGGAAAGGGGG 59.220 40.000 0.00 0.00 43.68 5.40
4533 9711 0.804989 GGAAGTTTCAGGACATGCGG 59.195 55.000 0.00 0.00 0.00 5.69
4569 9747 6.757897 TTAAACGAATCAGGAGATTTGCAT 57.242 33.333 5.57 0.00 45.67 3.96
4574 9752 8.348285 TCCAAAATTAAACGAATCAGGAGATT 57.652 30.769 0.00 0.00 46.85 2.40
4624 9831 5.390991 GGAGAGGACGAAAGCTACAAAATTG 60.391 44.000 0.00 0.00 0.00 2.32
4679 9886 5.592282 TGAGAGAATTCAGAGCCTAGTACAG 59.408 44.000 8.44 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.